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Kuvempu University
Sahyadri science college Shivamogga.
Presented by:
G Yadav
M.Sc., 1st year
PG Dept. of Biotechnology
Sahyadri science college
Shivamogga.
Guide:
Arunodaya H. S.
Lecture
PG Dept. of Biotechnology
Sahyadri science college
Shivamogga.
Artificial virus
INTODUCTION
Definition: Viruses are ultra-microscopic, non-cellular living particles,
composed solely of a nucleic acid (DNA or RNA) core, surrounded by a protein
envelope called capsid.
CHARACTERISTICS FEATURES OF VIRUS
HISTORY
 In 1886, Adolf Meyer observed
viruses in tobacco plants and the
viruses were TMV
 In 1897, Beijer-inck coined the Latin
name ‘virus’ meaning poison
 In 1908, The virus was isolated by
Karl Landsteiner and Erwin Popper
and was first cultured in cell cultures
 In 2002, Eckard Wimmer synthesized
Polio virus artificially.
 In 2003, Craig venter and his team -
PHI-X174
Adolf meyer Beijerinck
Eckard wimmerCraig venter
WHY SYNTHETIC VIRUS
Artificial viruses are "strong curiosity" as much as by "an urgent need to
understand, prevent and cure viral disease," a team of scientists has built a
virus using entirely artificial means.
POLIO VIRUS PHI-X 174
ARTIFICIAL VIRUS
Polio virus
 Poliovirus disease (Polio) was first
described in Britain in 1789 by Michael
Underwood
 The virus was first isolated in 1909 by
Karl Landsteiner and Erwin Popper.
 The virus is composed of an ss RNA
genome and a protein capsule.
 The genome is single-stranded positive-
sense RNA genome that is about 7500
nucleotides long,27-30 nm in size.
 Capsid composed of 60 capsomers
arranged in a icosahedral symmetry.
STEPWISE OF VIRAL GENOME SYNTHESIS
PREPARATION OF ARTIFICIAL POLIOVIRUS
METHOD FOR SYNTHESIZING VIRAL GENOME
Fig. :Generating RNA viruses via complementary DNA :A) Synthesis of cDNA catalysed with reverse
transcriptase. (B) Chemical synthesis of cDNA.
BACTERIOPHAGHE
 The bacteriophage is a single-stranded
DNA (ssDNA) virus that infects E. coli,
and first DNA-based genome to be
sequenced.
 This work was completed by Fred
Sanger and his team in 1977.
 In 2003, it was reported by Craig
Venter's group that the genome of
ΦX174 was the first to be completely
assembled in vitro from synthesized
oligonucleotides.
 The ΦX174 virus particle has also
been successfully assembled in vitro.
Fig. : PHI-X-174(Ø-X-174)
STRUCTURE
 PHIX174(φX174) is a virus that infects
the bacterium E. coli. Hence φX174 is
a bacteriophage.
 φX174 consists of a protein coat which
envelopes a core that contains both
protein &DNA.
 The coat contains 60 molecules each
of two proteins (F&G)and12molecules
of another protein (H).
 The virion contains one molecule of
DNA and 60 copies of a 4th J protein.Fig. : PHI-X-174(Ø-X-174)
Fig. : Global synthesis of infectious X174 bacteriophage from synthetic oligonucleotides
STEPWISE OF BACTERIOPHAGE SYNTHESIS
APPLICATION
Viruses are used in gene therapy, they are used to
genetically manipulate somatic cells of individuals and
they are used in production of transgenic plants and
animals.
Vaccines that are developed from viruses are called
viral vaccines. Artificial viruses are now designed to
form the specific vaccines.
Sequencing of genome is an important step to cure the
disease. Nowadays it is done by artificial virus.
 virus is the gate way of new deadly
disease .
Example: Ebola
 Ethical reason: design and
construction of new forms not present
in nature is not acceptable by every
one.
 Bringing about the Method of artificial
viruses is leads to the gate way
bioterrorism
DISADVANTAGES
CONCLUSION
REFERENCE
 EMPO REPORTS VOL7/SPECIAL ISSUE/2006
 PNAS December 23, 2003
 https://en.wikipedia.org/wiki/Synthetic_virology
 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2819212/
 http://fig.cox.miami.edu/~cmallery/150/gene/new.virus.htm
THANK YOU FOR YOUR VALUABLE TIME

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Artificial virus or designer virus

  • 1. Kuvempu University Sahyadri science college Shivamogga. Presented by: G Yadav M.Sc., 1st year PG Dept. of Biotechnology Sahyadri science college Shivamogga. Guide: Arunodaya H. S. Lecture PG Dept. of Biotechnology Sahyadri science college Shivamogga. Artificial virus
  • 2. INTODUCTION Definition: Viruses are ultra-microscopic, non-cellular living particles, composed solely of a nucleic acid (DNA or RNA) core, surrounded by a protein envelope called capsid.
  • 4. HISTORY  In 1886, Adolf Meyer observed viruses in tobacco plants and the viruses were TMV  In 1897, Beijer-inck coined the Latin name ‘virus’ meaning poison  In 1908, The virus was isolated by Karl Landsteiner and Erwin Popper and was first cultured in cell cultures  In 2002, Eckard Wimmer synthesized Polio virus artificially.  In 2003, Craig venter and his team - PHI-X174 Adolf meyer Beijerinck Eckard wimmerCraig venter
  • 5. WHY SYNTHETIC VIRUS Artificial viruses are "strong curiosity" as much as by "an urgent need to understand, prevent and cure viral disease," a team of scientists has built a virus using entirely artificial means.
  • 6. POLIO VIRUS PHI-X 174 ARTIFICIAL VIRUS
  • 7. Polio virus  Poliovirus disease (Polio) was first described in Britain in 1789 by Michael Underwood  The virus was first isolated in 1909 by Karl Landsteiner and Erwin Popper.  The virus is composed of an ss RNA genome and a protein capsule.  The genome is single-stranded positive- sense RNA genome that is about 7500 nucleotides long,27-30 nm in size.  Capsid composed of 60 capsomers arranged in a icosahedral symmetry.
  • 8. STEPWISE OF VIRAL GENOME SYNTHESIS
  • 10. METHOD FOR SYNTHESIZING VIRAL GENOME Fig. :Generating RNA viruses via complementary DNA :A) Synthesis of cDNA catalysed with reverse transcriptase. (B) Chemical synthesis of cDNA.
  • 11. BACTERIOPHAGHE  The bacteriophage is a single-stranded DNA (ssDNA) virus that infects E. coli, and first DNA-based genome to be sequenced.  This work was completed by Fred Sanger and his team in 1977.  In 2003, it was reported by Craig Venter's group that the genome of ΦX174 was the first to be completely assembled in vitro from synthesized oligonucleotides.  The ΦX174 virus particle has also been successfully assembled in vitro. Fig. : PHI-X-174(Ø-X-174)
  • 12. STRUCTURE  PHIX174(φX174) is a virus that infects the bacterium E. coli. Hence φX174 is a bacteriophage.  φX174 consists of a protein coat which envelopes a core that contains both protein &DNA.  The coat contains 60 molecules each of two proteins (F&G)and12molecules of another protein (H).  The virion contains one molecule of DNA and 60 copies of a 4th J protein.Fig. : PHI-X-174(Ø-X-174)
  • 13. Fig. : Global synthesis of infectious X174 bacteriophage from synthetic oligonucleotides STEPWISE OF BACTERIOPHAGE SYNTHESIS
  • 14. APPLICATION Viruses are used in gene therapy, they are used to genetically manipulate somatic cells of individuals and they are used in production of transgenic plants and animals. Vaccines that are developed from viruses are called viral vaccines. Artificial viruses are now designed to form the specific vaccines. Sequencing of genome is an important step to cure the disease. Nowadays it is done by artificial virus.
  • 15.  virus is the gate way of new deadly disease . Example: Ebola  Ethical reason: design and construction of new forms not present in nature is not acceptable by every one.  Bringing about the Method of artificial viruses is leads to the gate way bioterrorism DISADVANTAGES
  • 17. REFERENCE  EMPO REPORTS VOL7/SPECIAL ISSUE/2006  PNAS December 23, 2003  https://en.wikipedia.org/wiki/Synthetic_virology  https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2819212/  http://fig.cox.miami.edu/~cmallery/150/gene/new.virus.htm
  • 18. THANK YOU FOR YOUR VALUABLE TIME

Editor's Notes

  1. Viruses are ultra-microscopic, non-cellular living particles, composed solely of a nucleic acid (DNA or RNA) core, surrounded by a protein envelope called capsid. The term virus is derived from Latin which means poison or venom A virus is a small infectious agent that replicates only inside the living cells of other organisms. Viruses can infect all types of life forms, from animals and plants to microorganisms, including bacteria and archaea.
  2. Characteristics of viruses They are enclosed in a protective envelope. They have spikes, which helps them to attach to the host cell. They are non cellular. They do not respire, do not metabolize and do not grow but they do reproduce They contain a protein coat called the capsid. They have a nucleic acid core containing DNA or RNA.
  3. Def-Synthetic Virology/viruses the scientific discipline engaged in the study and engineering of synthetic, man-made Viruses. Artificial viruses are "strong curiosity" as much as by "an urgent need to understand, prevent and cure viral disease," a team of scientists has built a virus using entirely artificial means.
  4. The first man-made infectious viruses generated without any natural template were of the Polio virus and the φX174 bacteriophage. With synthetic live viruses, it is not the whole viruses that are synthesized, but rather their genome at first, both in the case of DNA and RNA viruses
  5. Characteristics of polio virus Polioviruses have affiliation to the nervous system, especially the cells of the anterior horn of the spinal cord and cranial nerve motor neurons. Poliovirus replicates optimally at 37ºC. Poliovirus can easily be killed by heat, ultraviolet light and chemicals such as formaldehyde and chlorine. Poliovirus can withstand acidic environment within the pH range of 3 to 5; this is the reason why they can survive exposure to gastric acid
  6. Method of synthesis of artificial virus include Viral RNA genome sequence out of internet. First DNA sequence is to be converted. Short DNA fragments are chemically synthesised. Pieces of DNA are assembled and linked together. DNA is recognised by the phage T7 RNA polymerase.RNA is synthesised. Method of synthesis of artificial virus include. Viral RNA genome sequence out of internet. First DNA sequence is to be converted. Short DNA fragments are chemically synthesised. Pieces of DNA are assembled and linked together. DNA is recognised by the phage T7 RNA polymerase is synthesised. Method of synthesis of artificial virus include Viral RNA genome sequence out of internet. First DNA sequence is to be converted. Short DNA fragments are chemically synthesised. Pieces of DNA are assembled and linked together. DNA is recognised by the phage T7 RNA polymerase RNA is synthesised.
  7. Synthetic poliovirus RNA Mammalian cells ( HeLa) are taken and homogenised. They are countrified. Cell free extract is taken. Incubated 15hours at 340c. monolayer of HeLa cells are produced. They are observed under microscope.
  8. Two different strategies for generating RNA viruses via complementary DNA (cDNA)Intermediates. (A) Synthesis of cDNA catalysed with reverse transcriptase followed by transfection of the cDNA into host cells (Taniguchl et al, 1978. Racanlello & Baltimore, 1981) (B) Chemical synthesis of cDNA followed by transcription and incubation of the infectious viral R in cell-free extract (Celloet al, 2002; Molla et al, 1991)
  9. Historically important virus because first viral genome to be sequenced (1977), + sense, ss DNA, circular. 5386 nucleotides-very small genome. genome infectious by itself. model for fundamentals of DNA replication
  10. The DNA molecule is single-stranded (ssDNA) and is in the form of a closed circle. This tiny genome was the first sequenced (by Fred Sanger)
  11. Cloning of synthetic DNA. The generation of synthetic poxviruses as described by Evans and colleagues and cloning of synthetic DNA using TAR in yeast are illustrated. Synthesized DNA fragments are assembled and cloned in a set of plasmids containing overlapping DNA fragments. Release of cloned DNA fragments from plasmids creates a set of overlapping DNA fragments that can recombine in yeast (TAR cloning) to form a YAC/BAC (left side) or in helper virus-infected cells to rescue poxviruses (right side). The yeast hub is versatile and allows for the generation of synthetic viruses, bacteria, and even eukaryotic chromosomes. BAC, bacterial artificial chromosome; TAR, transformation-associated recombination; YAC, yeast artificial chromosome. Synthetic virology is the production of live virus using a complete reference sequence. No natural viral copy is necessary – the parent of the virus is the computer. Synthetic virology combines the technologies of DNA synthesis and reverse genetics' viruses typically have short genomes that make them ideal for synthesis. Viruses can be attenuated through rational in silico design of novel sequences incorporating hundreds to thousands of silent nucleic acid mutations. Using modern RNA and DNA extraction methodologies, viral genetic information can be sequenced and used to ‘resurrect’ viruses once thought extinct. Then the artificial virus is produce