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Animal health assessment (including zoonoses)
              in smallholder pig value chains

                               Fred Unger
               International Livestock Research Institute




Project Inception Workshop: Reducing Disease Risk and Improving Food Safety in
                     Smallholder Pig Value Chains in Vietnam
          August 14, 2012, Melia Hotel, 44B Ly Thuong Kiet Street, Hanoi
Content


Introduction
Objectives
Approach & methods
  a) (Risk) Assessment
  b) Intervention
Project framework

Risk profiling                     1


2                  Microbial RA
                                                  3
                                                                  Action research 1
                   Chemical RA
Risk assessment
                                                                  Action research 2
                   AH RA
                                                  Interventions
                   Economics (eg health, CBA)                      Action research 3


                                                                   …………………
                   Rapid assessment
Value chain
                   Economic assessment

                   …

                   ….




4
    Engaging stakeholders and co-generating evidence, Advocacy, Communication
Introduction - Knowledge gaps

– What are the key animal health (AH) constraints
  & their impact
  • Animal health
     –Disease
        » Which diseases
        » Production diseases versus zoonoses or FBD
        » Emerging versus neglected
  • Feed
  • Management (e.g. housing)
Knowledge gaps


–Where is the diseases risk created
  • Prior to farm
  • On – farm
  • Later along slaughter and processing
– How the risk can be best managed
– What are possible control points to manage
  the risk
Considerations – disease spread & drivers

• Pathogens are spread by movements of inputs, animals and
  animal products, fomites, people, equipment and during transport
  (Supporting tool: Risk assessment)

• Movements of inputs, animals and products within the value
  chains are driven and controlled by people (Supporting tool: VCA)

• Understanding the motivations for movements is essential for
  evidence based mitigation options and effective control (VCA &
  RA and socio economic, social sciences)
Objective 1 – Animal health Assessment

Objective 1:

To assess impacts of pork-borne diseases on human
health and the livestock sector and identify critical
points/opportunities for risk management.
Methodology - address Objective 1

Impact of AH constraints

1. Risk profiling – (a) review and (b) rapid (value
   chain) assessment

2. Specific assessment of AH constraints

3. Risk assessment
Methodology - address Objective 1
1a Risk profiling - review
Method:    Literature review

Output:    Report
           List relevant diseases and first priotization, e.g.
           related to:
              • importance for specific sector/production type
                   (small scale, breeding, fattening, age groups)
              • basis for selection of specific target diseases

           Further triangulation in next steps
Considerations on pig diseases
• Pig diseases with potential impact on AH
   •   FMD, PRRS
   •   multi-factorial (respiratory) diseases
   •   Endo/ecto-parasites
   •   Housing/feeding related
   •   Production system (breeding/fattening)

 versus

• Zoonotic or FBD diseases
 e.g. Trichinella, Cysticercosis
Content

1. Introduction and challenges
2. Objectives
3. Approach
  a) Assessment
  b) Intervention
  c) Communication
    Challenges: mild / subclinical courses possible
4. Risk assessment
    • Quite a few of zoonoses but also CSF
    • No clinic at all at producer, certain FBD
Review
Summary table on AH constraints
Disease/          Prod        Surveillance Diagnostic Relevance   reference
pathogen          sector/     / control    & costs
                  age class
PRRS
FMD
Actinobacillose

.
Cysticercose
Methodology - objective 1
         Aligned with for PH risk and socio-economic risk component

1b Risk profiling - rapid (value chain) assessment
•   Basic understanding of AH constraints and of their impact
•   Further priotization – list of 1-2 key pig diseases
•   Information for pathway identification
•   Map of animal production (AP) and AH constraints

Tools:           FGD, IDI, checklist, PE techniques

Contents:        Pig keeping constraints
                 Input system (feed, housing, bio-security)
                 AH constraints (mortality, morbidity)
                 Animal health services including drug shops
                 Access to markets
Methodology - objective 1
      Aligned with for PH risk and socio-economic risk component

2. Specific assessment of AH constraints
Output: In-depth understand of AH constraints including

Use of output:
   – Calculation of epidemiological rates, disease burden
   – Risk pathways, potential risk mitigation options, risk assessment
        Triangulate information from difference sources and techniques
        (FGD/ questionnaires, producer and slaughterhouse, AH services)



To support identification risk question and intervention (objective 2)
Methodology - objective 1
      Aligned with for PH risk and socio-economic risk component

2. Specific assessment of AH constraints cont.

Targeted VC Actor:     Producer (input also from other actors)

Components:
• Survey in pig producing households (HH)(+ biological sampling)
• Abattoir survey (+ biological sampling)
• Longitudinal survey at pig producing HH (+ biological sampling)
• Collection of community level surveillance reports of pig disease
   incidence and pig mortality
Specific assessment of AH constraints

Survey in pig producing HH (including biological sampling)

Objective:    Assess AH impact for selected pg diseases

Methodology: Up to 400 HH from 2 areas (stratified by different
             types of VC)
             Subset of HH depending on number selected diseases
             HH questionnaire, observations
             Sample size/HH: prevalence estimate based, pathogens (1-3)
             also some implications from available budget (limited)
             • Targeted biological sampling
             • Pooled samples
Specific assessment of AH constraints

Additional slaughterhouse data collection

Objective:    Assess AH constraints for selected diseases
              Aligned with PH survey

Methodology: Up to 30 slaughterhouses from 2 areas
             Questionnaire, observations, pre-slaughter inspection
             Optional confirmatory biological sampling (pre-
             slaughter)
Specific assessment of AH constraints

Longitudinal survey at pig producing HH (up to 60)

Objective:    Determine AH impact over time
              (e.g. calculate incidences for selected diseases and
              provide more data for risk assessment &
              disease burden)

Methodology: Up to 60 HH from two provinces repeatable
             revisited over time (12 months).
             Optional confirmatory biological sampling if
             required. Questionnaire, observations
Specific assessment of AH constraints

Collection of community level surveillance reports of pig disease
incidence and pig mortality

Objective:    Determine AH impact of selected diseases
              (Triangulation with other data collected)

Methodology: Animal health officers from study districts will be at
             regular intervals (monthly) contacted over 12
             months each
3. Risk assessment / Risk analysis

The four components of risk analysis

1. Hazard identification (specific risk question!)
2. Risk assessment (RA) (qualitative/quantitative)
3. Risk management
4. Risk communication

Qualitative RA:
Probabilities are assessed and described textually on a scale from negligible to
very high
Quantitative RA:
Determination of risk using quantitative terms

http://www.oie.int/eng/normes/mcode/en_chapitre_1.2.1.htm
Risk assessment
General question to be answered before:

• Which processes within different production and
  marketing systems carry (highest) risk for disease spread
  e.g. input sector (feed)

• What are their relative contributions to overall risk?
Risk assessment


 •   Hazard
 •   Potential Transmission routes (pathways)
 •   Transmission parameters (e.g. survival time, susceptibility)
 •   Release
 •   Exposure
 •   Consequences

 Source:        Literature, undertaken surveys
                (prevalence's, incidences) EO
Risk assessment
Hazard identification
e.g.    Specific pathogen - prioritization required
        How to choose a specific disease/hazard?
        (parasitic, viral, bacteria, epidemic, endemic)
        Which production type and age class affected?
Risk issue: e.g. risk of introduction, risk of transmission
Data needs : e.g.
        pathogen (prevalence, survival potential ect.)
        animal (e. g susceptibility)
        movement (products, animals, fomites…) VCA & pathways required!
        management (e.g. bio-security, housing, feeding)
        policies (e.g. surveillance)
        people/VC actors (e.g. perception, awareness, incentives)
Objective 2:
     To develop and test incentive-based innovations

Repeated randomized control trials

• A specific animal health constraints will be addressed identified
  under objective 1 by using and testing a set of targeted
  interventions (or package)

   – Feasibility
   – Affordability
   – Chance for success
   (e.g. parasitic burdon)

   Aligned with economic component (e.g. CBA)
Literature
• FA0, 2011
  VC approach to animal disease risk management
  FAO Animal production and Health Guidelines, FAO, 2011
• DEFRA.UK (Department for Environment, Food and Rural Affairs
  http://archive.defra.gov.uk/)
  Risk of Introduction e.g. Rabies, Echinococcus, EIA, FMD, H5N1, H1N1 ect.
• EFZA European Food Safety Authority
  http://www.efsa.europa.eu/en/aboutefsa.htm
  Risk assessment related to BSE, HPAI, Biological hazards
• A Quantitative Risk Assessment for the onward transmission of Highly
  Pathogenic Avian Influenza H5N1 from an infected small-scale broiler
  farm in Bogor, West Java, Indonesia
  (Will de Glanville, et. al 2010)
Thank You

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Animal health assessment (including zoonoses) in smallholder pig value chains

  • 1. Animal health assessment (including zoonoses) in smallholder pig value chains Fred Unger International Livestock Research Institute Project Inception Workshop: Reducing Disease Risk and Improving Food Safety in Smallholder Pig Value Chains in Vietnam August 14, 2012, Melia Hotel, 44B Ly Thuong Kiet Street, Hanoi
  • 2. Content Introduction Objectives Approach & methods a) (Risk) Assessment b) Intervention
  • 3. Project framework Risk profiling 1 2 Microbial RA 3 Action research 1 Chemical RA Risk assessment Action research 2 AH RA Interventions Economics (eg health, CBA) Action research 3 ………………… Rapid assessment Value chain Economic assessment … …. 4 Engaging stakeholders and co-generating evidence, Advocacy, Communication
  • 4. Introduction - Knowledge gaps – What are the key animal health (AH) constraints & their impact • Animal health –Disease » Which diseases » Production diseases versus zoonoses or FBD » Emerging versus neglected • Feed • Management (e.g. housing)
  • 5. Knowledge gaps –Where is the diseases risk created • Prior to farm • On – farm • Later along slaughter and processing – How the risk can be best managed – What are possible control points to manage the risk
  • 6. Considerations – disease spread & drivers • Pathogens are spread by movements of inputs, animals and animal products, fomites, people, equipment and during transport (Supporting tool: Risk assessment) • Movements of inputs, animals and products within the value chains are driven and controlled by people (Supporting tool: VCA) • Understanding the motivations for movements is essential for evidence based mitigation options and effective control (VCA & RA and socio economic, social sciences)
  • 7. Objective 1 – Animal health Assessment Objective 1: To assess impacts of pork-borne diseases on human health and the livestock sector and identify critical points/opportunities for risk management.
  • 8. Methodology - address Objective 1 Impact of AH constraints 1. Risk profiling – (a) review and (b) rapid (value chain) assessment 2. Specific assessment of AH constraints 3. Risk assessment
  • 9. Methodology - address Objective 1 1a Risk profiling - review Method: Literature review Output: Report List relevant diseases and first priotization, e.g. related to: • importance for specific sector/production type (small scale, breeding, fattening, age groups) • basis for selection of specific target diseases Further triangulation in next steps
  • 10. Considerations on pig diseases • Pig diseases with potential impact on AH • FMD, PRRS • multi-factorial (respiratory) diseases • Endo/ecto-parasites • Housing/feeding related • Production system (breeding/fattening) versus • Zoonotic or FBD diseases e.g. Trichinella, Cysticercosis
  • 11. Content 1. Introduction and challenges 2. Objectives 3. Approach a) Assessment b) Intervention c) Communication Challenges: mild / subclinical courses possible 4. Risk assessment • Quite a few of zoonoses but also CSF • No clinic at all at producer, certain FBD
  • 12. Review Summary table on AH constraints Disease/ Prod Surveillance Diagnostic Relevance reference pathogen sector/ / control & costs age class PRRS FMD Actinobacillose . Cysticercose
  • 13. Methodology - objective 1 Aligned with for PH risk and socio-economic risk component 1b Risk profiling - rapid (value chain) assessment • Basic understanding of AH constraints and of their impact • Further priotization – list of 1-2 key pig diseases • Information for pathway identification • Map of animal production (AP) and AH constraints Tools: FGD, IDI, checklist, PE techniques Contents: Pig keeping constraints Input system (feed, housing, bio-security) AH constraints (mortality, morbidity) Animal health services including drug shops Access to markets
  • 14. Methodology - objective 1 Aligned with for PH risk and socio-economic risk component 2. Specific assessment of AH constraints Output: In-depth understand of AH constraints including Use of output: – Calculation of epidemiological rates, disease burden – Risk pathways, potential risk mitigation options, risk assessment Triangulate information from difference sources and techniques (FGD/ questionnaires, producer and slaughterhouse, AH services) To support identification risk question and intervention (objective 2)
  • 15. Methodology - objective 1 Aligned with for PH risk and socio-economic risk component 2. Specific assessment of AH constraints cont. Targeted VC Actor: Producer (input also from other actors) Components: • Survey in pig producing households (HH)(+ biological sampling) • Abattoir survey (+ biological sampling) • Longitudinal survey at pig producing HH (+ biological sampling) • Collection of community level surveillance reports of pig disease incidence and pig mortality
  • 16. Specific assessment of AH constraints Survey in pig producing HH (including biological sampling) Objective: Assess AH impact for selected pg diseases Methodology: Up to 400 HH from 2 areas (stratified by different types of VC) Subset of HH depending on number selected diseases HH questionnaire, observations Sample size/HH: prevalence estimate based, pathogens (1-3) also some implications from available budget (limited) • Targeted biological sampling • Pooled samples
  • 17. Specific assessment of AH constraints Additional slaughterhouse data collection Objective: Assess AH constraints for selected diseases Aligned with PH survey Methodology: Up to 30 slaughterhouses from 2 areas Questionnaire, observations, pre-slaughter inspection Optional confirmatory biological sampling (pre- slaughter)
  • 18. Specific assessment of AH constraints Longitudinal survey at pig producing HH (up to 60) Objective: Determine AH impact over time (e.g. calculate incidences for selected diseases and provide more data for risk assessment & disease burden) Methodology: Up to 60 HH from two provinces repeatable revisited over time (12 months). Optional confirmatory biological sampling if required. Questionnaire, observations
  • 19. Specific assessment of AH constraints Collection of community level surveillance reports of pig disease incidence and pig mortality Objective: Determine AH impact of selected diseases (Triangulation with other data collected) Methodology: Animal health officers from study districts will be at regular intervals (monthly) contacted over 12 months each
  • 20. 3. Risk assessment / Risk analysis The four components of risk analysis 1. Hazard identification (specific risk question!) 2. Risk assessment (RA) (qualitative/quantitative) 3. Risk management 4. Risk communication Qualitative RA: Probabilities are assessed and described textually on a scale from negligible to very high Quantitative RA: Determination of risk using quantitative terms http://www.oie.int/eng/normes/mcode/en_chapitre_1.2.1.htm
  • 21. Risk assessment General question to be answered before: • Which processes within different production and marketing systems carry (highest) risk for disease spread e.g. input sector (feed) • What are their relative contributions to overall risk?
  • 22. Risk assessment • Hazard • Potential Transmission routes (pathways) • Transmission parameters (e.g. survival time, susceptibility) • Release • Exposure • Consequences Source: Literature, undertaken surveys (prevalence's, incidences) EO
  • 23. Risk assessment Hazard identification e.g. Specific pathogen - prioritization required How to choose a specific disease/hazard? (parasitic, viral, bacteria, epidemic, endemic) Which production type and age class affected? Risk issue: e.g. risk of introduction, risk of transmission Data needs : e.g. pathogen (prevalence, survival potential ect.) animal (e. g susceptibility) movement (products, animals, fomites…) VCA & pathways required! management (e.g. bio-security, housing, feeding) policies (e.g. surveillance) people/VC actors (e.g. perception, awareness, incentives)
  • 24. Objective 2: To develop and test incentive-based innovations Repeated randomized control trials • A specific animal health constraints will be addressed identified under objective 1 by using and testing a set of targeted interventions (or package) – Feasibility – Affordability – Chance for success (e.g. parasitic burdon) Aligned with economic component (e.g. CBA)
  • 25. Literature • FA0, 2011 VC approach to animal disease risk management FAO Animal production and Health Guidelines, FAO, 2011 • DEFRA.UK (Department for Environment, Food and Rural Affairs http://archive.defra.gov.uk/) Risk of Introduction e.g. Rabies, Echinococcus, EIA, FMD, H5N1, H1N1 ect. • EFZA European Food Safety Authority http://www.efsa.europa.eu/en/aboutefsa.htm Risk assessment related to BSE, HPAI, Biological hazards • A Quantitative Risk Assessment for the onward transmission of Highly Pathogenic Avian Influenza H5N1 from an infected small-scale broiler farm in Bogor, West Java, Indonesia (Will de Glanville, et. al 2010)