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A  P ractical  O ntology for the  L arge- S cale  M odeling of  S cholarly  A rtifacts and their  U sage Marko A. Rodriguez  (1) Johan Bollen Herbert Van de Sompel Digital Library Research & Prototyping Team Los Alamos National Laboratory - Research Library (1)  [email_address] Acknowledgements: Lyudmila L. Balakireva (LANL),  Wenzhong Zhao (LANL) , Aric Hagberg (LANL) MESUR is supported by the Andrew W. Mellon Foundation.
Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
What is the MESUR project? ,[object Object],[object Object],[object Object],[object Object],[object Object]
Journal and Article data ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Usage data ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
The Primary Data Representation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],A B C
Example Scholarly Relationships ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
What is the Purpose of an Ontology?
The MESUR Data Flow
Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
RDF, RDFS, OWL ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
RDF, RDFS ex:marko ex:cookie ex:Human ex:Food ex:isEating rdf:type rdf:type ex:isEating rdfs:domain rdfs:range ontology instance
RDF, RDFS, OWL ex:fluffy ex:marko ex:Pet ex:Human ex:hasOwner rdf:type rdf:type ex:hasOwner rdfs:domain rdfs:range ontology instance _:0123 rdfs:subClassOf owl:onProperty “ 1” owl:maxCardinality ex:bob ex:hasOwner owl:Restriction rdf:type
The Triple Store SELECT ?a ?c WHERE  ( ?a type human ) ( ?a wrote ?b )  ( ?b type article ) ( ?c wrote ?b ) ( ?c type human ) ( ?a != ?c ) ,[object Object],[object Object],[object Object],[object Object]
Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
The Problem of Scale ,[object Object],[object Object],[object Object],[object Object],[object Object]
Relational Database & Triple Store
The MESUR Class Hierarchy
The Context Classes Inspired by OntologyX: http://www.ontologyx.com
The Publishes Context
The Uses Context
Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
Analysis Algorithms ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Journal Citation and Usage
Calculating the 2007 Impact Factor SELECT  ?x WHERE  ( ?x rdf:type mesur:Citation ) ( ?x mesur:hasSource ?a) ( ?x mesur:hasSink urn:issn:0028-0836 ) ( ?x mesur:hasSourceTime ?u) AND  (?u == 2007) ( ?x mesur:hasSinkTime ?t) AND (?t > 2004 AND ?t < 2007) SELECT  ?y WHERE  ( ?y rdf:type mesur:Publishes ) ( ?y mesur:hasGroup urn:issn:0028-0836 ) ( ?y mesur:hasTime ?t ) AND  (?t > 2004 AND ?t < 2007) INSERT < _123 rdf:type mesur:ImpactFactor > INSERT < _123 mesur:hasObject urn:issn:0028-0836 > INSERT < _123 mesur:hasStartTime 2007 > INSERT < _123 mesur:hasEndTime 2007 > INSERT < _123 mesur:hasNumbericValue  (COUNT(?x) / COUNT(?y)) > The 2007 impact factor of journal  A  is the total number of citations to articles published in  A  in 2005 and 2006 from articles published in 2007 in journal  B divided by the total number of articles published by journal  A  in 2005 and 2006.
Calculating the 2007 Usage Impact Factor SELECT  ?x WHERE  ( ?x rdf:type mesur:Uses )  ( ?x mesur:hasUnit ?a ) ( ?x mesur:hasGroup ?b ) ( ?b mesur:partOf urn:issn:1082-9873 ) ( ?x mesur:hasTime ?t ) AND  (?t == 2007) ( ?y rdf:type mesur:Publishes ) ( ?y mesur:hasUnit ?a ) ( ?y mesur:hasTime ?u ) AND (?u > 2004 AND ?u < 2007) SELECT  ?y WHERE  ( ?y rdf:type mesur:Publishes ) ( ?y mesur:hasGroup ?a ) ( ?a mesur:partOf urn:issn:1082-9873 ) ( ?y mesur:hasTime ?t ) AND  (?t > 2004 AND ?t < 2007) INSERT < _123 rdf:type mesur:UsageImpactFactor > INSERT < _123 mesur:hasObject urn:issn:1082-9873 > INSERT < _123 mesur:hasStartTime 2007 > INSERT < _123 mesur:hasEndTime 2007 > INSERT < _123 mesur:hasNumbericValue  (COUNT(?x) / COUNT(?y)) > The 2007 usage impact factor of journal  A  is the total number of 2007 usage events of articles published in  A  in 2005 and 2006 divided by the total number of articles published by journal  A  in 2005 and 2006.
Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
Contributions ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Some Related Publications ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Questions MESUR is at  http://www.mesur.org MESUR ontology is at  http://www.mesur.org/schemas/2007-01/mesur/ Many thanks to the Andrew W. Mellon Foundation for their support

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A Practical Ontology for the Large-Scale Modeling of Scholarly Artifacts and their Usage

  • 1. A P ractical O ntology for the L arge- S cale M odeling of S cholarly A rtifacts and their U sage Marko A. Rodriguez (1) Johan Bollen Herbert Van de Sompel Digital Library Research & Prototyping Team Los Alamos National Laboratory - Research Library (1) [email_address] Acknowledgements: Lyudmila L. Balakireva (LANL), Wenzhong Zhao (LANL) , Aric Hagberg (LANL) MESUR is supported by the Andrew W. Mellon Foundation.
  • 2. Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
  • 3. Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
  • 4.
  • 5.
  • 6.
  • 7.
  • 8.
  • 9. What is the Purpose of an Ontology?
  • 11. Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
  • 12.
  • 13. RDF, RDFS ex:marko ex:cookie ex:Human ex:Food ex:isEating rdf:type rdf:type ex:isEating rdfs:domain rdfs:range ontology instance
  • 14. RDF, RDFS, OWL ex:fluffy ex:marko ex:Pet ex:Human ex:hasOwner rdf:type rdf:type ex:hasOwner rdfs:domain rdfs:range ontology instance _:0123 rdfs:subClassOf owl:onProperty “ 1” owl:maxCardinality ex:bob ex:hasOwner owl:Restriction rdf:type
  • 15.
  • 16. Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
  • 17.
  • 18. Relational Database & Triple Store
  • 19. The MESUR Class Hierarchy
  • 20. The Context Classes Inspired by OntologyX: http://www.ontologyx.com
  • 23. Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
  • 24.
  • 26. Calculating the 2007 Impact Factor SELECT ?x WHERE ( ?x rdf:type mesur:Citation ) ( ?x mesur:hasSource ?a) ( ?x mesur:hasSink urn:issn:0028-0836 ) ( ?x mesur:hasSourceTime ?u) AND (?u == 2007) ( ?x mesur:hasSinkTime ?t) AND (?t > 2004 AND ?t < 2007) SELECT ?y WHERE ( ?y rdf:type mesur:Publishes ) ( ?y mesur:hasGroup urn:issn:0028-0836 ) ( ?y mesur:hasTime ?t ) AND (?t > 2004 AND ?t < 2007) INSERT < _123 rdf:type mesur:ImpactFactor > INSERT < _123 mesur:hasObject urn:issn:0028-0836 > INSERT < _123 mesur:hasStartTime 2007 > INSERT < _123 mesur:hasEndTime 2007 > INSERT < _123 mesur:hasNumbericValue (COUNT(?x) / COUNT(?y)) > The 2007 impact factor of journal A is the total number of citations to articles published in A in 2005 and 2006 from articles published in 2007 in journal B divided by the total number of articles published by journal A in 2005 and 2006.
  • 27. Calculating the 2007 Usage Impact Factor SELECT ?x WHERE ( ?x rdf:type mesur:Uses ) ( ?x mesur:hasUnit ?a ) ( ?x mesur:hasGroup ?b ) ( ?b mesur:partOf urn:issn:1082-9873 ) ( ?x mesur:hasTime ?t ) AND (?t == 2007) ( ?y rdf:type mesur:Publishes ) ( ?y mesur:hasUnit ?a ) ( ?y mesur:hasTime ?u ) AND (?u > 2004 AND ?u < 2007) SELECT ?y WHERE ( ?y rdf:type mesur:Publishes ) ( ?y mesur:hasGroup ?a ) ( ?a mesur:partOf urn:issn:1082-9873 ) ( ?y mesur:hasTime ?t ) AND (?t > 2004 AND ?t < 2007) INSERT < _123 rdf:type mesur:UsageImpactFactor > INSERT < _123 mesur:hasObject urn:issn:1082-9873 > INSERT < _123 mesur:hasStartTime 2007 > INSERT < _123 mesur:hasEndTime 2007 > INSERT < _123 mesur:hasNumbericValue (COUNT(?x) / COUNT(?y)) > The 2007 usage impact factor of journal A is the total number of 2007 usage events of articles published in A in 2005 and 2006 divided by the total number of articles published by journal A in 2005 and 2006.
  • 28. Overview The MESUR project A quick RDF/RDFS/OWL tutorial Modeling the scholarly community Practical applications of the model Conclusion
  • 29.
  • 30.
  • 31. Questions MESUR is at http://www.mesur.org MESUR ontology is at http://www.mesur.org/schemas/2007-01/mesur/ Many thanks to the Andrew W. Mellon Foundation for their support