MICROBIOLOGY COURSE 3rd
PROFESSIONAL EXAMINATION
3RD YEAR.
• General guide lines and course for the
examination.
• Study objectives.
• Basic guidelines.
Prof. Abbas Hayat
GENERAL MICROBIOLOGY
• Cell structure
– Optical methods.
• 1. Light Microscope, Electron Microscope,
Dark field illumination, Phase contrast.
– Eukaryote and Prokaryote Cell structure.
– Staining Methods. Grams stain Zeihl –Nelson,
special stains
– Differences between Gram positive & Gram
negative cell wall.
– Protoplasts, Spheroplasts and L forms.
– Capsule, Flagella, Pili ( Fimbriaea). Endospores.
– Morphologic changes during growth.
• Microbial genetics.
– Mutation, Intracellular Transfer & Genetic
recombination, transformation.
Transduction by bacteriophage. Plasmid
mediated conjugation.
•Cultivation of Microorganisms.
Culture Medias, culturing techniques,
Differential Medias, Selective Medias,
Enriched Medias, Co2 incubation,
anaerobic methods.
• Antimicrobial Chemotherapy.
– Mechanism of action and clinically used Anti
microbial drugs.
– Resistance to anti microbial agents.
– Antibiotic Sensitivity Testing
– Sterilization & Disinfectation.
• Anti septic and Disinfectants.
• Chemical methods.
• Physical methods. Dry heat, Moist heat,
Pasteurization, Tyndillization, Flaming, Hot air
oven, autoclave, Ethylene Oxide, gamma
radiations, UV light, etc.
Sterilization & Disinfectation.
– Anti septic and
Disinfectants.
– Chemical methods.
– Physical methods. Dry heat,
Moist heat, Pasteurization,
Tyndillization, Flaming, Hot
air oven, autoclave, Ethylene
Oxide, gamma radiations, UV
light, etc.
Host- Parasite relationship
– Infections
– Attribute of Microorganism That
Enable Them To Cause Disease.
– Mechanisms of Non- Specific Host
Resistance.
– Resistance & Immunity. Natural
Immunity. Acquired Immunity.
Genetic influences.
Miscellaneous
• Differences between
Exotoxins and Endo toxins,
Bacteria producing, and
mode of action.
Immunology: Antigens and
Antibodies.
– Definitions and cellular basis of
Immune Response.
– Antibodies: Structure and
Formation.
– Antigen-Antibodies Reactions.
Serology, Precipitation reactions,
gel diffusion tests, agglutination
Reactions, Coombs test, Toxin-
Antitoxin Reactions. Inhibition
Reactions, Immunofluorescence
– Electrophoresis.
– Radioimmunoassay.
– Enzyme Linked
Immunoassays (ELISA).
– Complement mediated
reactions, and the
Compliment fixation Test.
Immunization:
Active and Passive
immunization, and
Recommended
Schedule.
Antibody –mediated & Cell
Mediated Reactions.
– Antibody =mediated
hypersensitivity.
– Anaphylaxis, Arthus Reaction,
serum sickness, immune Complex
Disease, drug hypersensitivity.
– Cell Mediated & Hypersensitivity:
Tuberculin Hypersensitivity.
– Tests to evaluate cell mediated
Hypersensitivity.
– Role of Lipid waxes &
Adjuvant. In development of
cell mediated Reactions.
– Auto immune Diseases.
– Transplant immunity.
– Tumor Immunity.
– Transplant Immunity.
SPECIAL MICROBIOLOGY: BACTERIA
FUNGI AND VIRUSES OF MEDICAL
IMPORTANCE
• Pyogenic Cocci.
– Staphylococci. Morphology Types Diseases,
Culturing, Diagnosis Prevention, and Coagulase
test. Catalane test. Methicillin Resistant
Staphylococcus aureus MRSA. Etc
– Streptococci and post streptococcal sequels.
A.S.O. titer etc.
– Pneumococci. Diseases Optochin Test etc
– Neisseria: Morph. Culturing Types Diseases,
Biochemical Oxidase test N. gonorrhoeae N.
meningitidis. C.S.F. Findings etc.
Gram Positive bacilli.
– Aerobic spore forming: Bacillus Anthrax.
– Anaerobic spore forming: Clostridium tetani,
botulinum, perfringens difficile,
Pseudomembraneous colitis, Gas gangrene
etc.
• Corynaebacterium. Morphology Types
Diseases, Culturing, and Diagnosis
Prevention: special stains, culturing, and
Elks test. Shick test, effects of Exotoxins
etc.
• Mycobacteria Mycobacterium tuberculosis’s,
other Mycobacteria or atypical mycobacterium,
Koch’s phenomenon. Mantoux test. Primary
and reactivation disease, Diagnostic methods,
MDRT. Treatment, D.O.T.`s etc.
• Enteric gram negative bacteria Coli forms,
lactose fermenters and non fermenters,
diseases produced, e. coli Klebseilla
Enterbacter Proteus , Pseudomonas,
Salmonella, Shigella. TSI medium reactions
• Vibrio cholera.
Small gram negative rods.
Brucella, Hemophilus
influenzae and others,
Bordetella pertussis.
Campylobacter and
Helicobacter species
Morphology Types Diseases,
Culturing , Diagnosis and
prevention.
• Spirochetes & Other Spiral
organisms.
– Treponema, Borrelia
Leptospira.
– Fusobacterium (Vincent’s
angina).
• Rickettsial diseases, classify, vectors
involved Q fever, Weil Felix test,
Morphology Types Diseases,
Culturing ,Diagnosis Prevention etc.
• Chlamydia. C. trachomitis,
psittacosis, Genital tract infections,
Respiratory Tract involvement
(TWAR). Lymphogranuloma
venereum, other agents.
Mycoplasma species
Non Gonococcal urethritis,
Legionella pneumophilia,
Listeria monocytogens.
SOME IMPORTANT ORGANISMS
AND DISEASES.
• Actinomyces Nocardia and Streptomyces.
• Diagnostic techniques used in
microbiology. Specimen collection,
Processing of specimens, Staining, Urine,
faces urine cultures etc. , Serology.
• Causes of food poisoning prevention and
diagnosis.
• Causes of meningitis and C.S.F. findings in
different types.
• Causes Urinary Tract Infection and
diagnosis and treatment.
• Typhoid fever, classification of salmonella
and diseases produced. Diagnosis,
specimens during different stages of
Disease, Widal test, Culture mediums,
Typhi dot test, etc.
• S.T.I`s and lab. diagnosis. esp. Serological
Tests For Syphilis.
• Hospital acquired infections and
prevention.
• Upper and lower Respiratory infections,
and their diagnosis.
• Pyogenic infections.
• Zoonosis.
• Urogenital tract infections.
• Food borne infections.
• Brain abscess and meningitis.
• Intrauterine infections.
• Routes of transmission of infections.
• Infection Control Methods.
• Hepatitis.ABCD&E.
• HIV and opportunist infections.
• Emerging infections. Re emerging
infections
• Specimen collection and lab.
Methods.
• Sterilization techniques
PARASITOLOGY
• Life Cycles, Intermediate
hosts, definitive hosts, vectors,
diseases produced, diagnosis
and treatment.
Protozoa.
• . Entamoeba histolytica other free Living
Amoeba, Naeglaria, acanthamoeba.
• Differences between Ent. Histolytica and
Ent. coli. Species, differences between
bacillary and amoebic dysentery, Intestinal
and extra intestinal lesions of E. histolytica
& E. coli
• Giardia, Trichomonas, Balantidium coli.
Haemoflagellates
• Trypanosomiasis,I. sleeping sickness
transmitted by Tse Tse fly trypansoma
rhodesiense and Trypanosoma
gambiense ii. American causing Chagas
disease, transmitted by Tiresome Bug,
Xeno diagnosis.
• Leishmania amastigote and promastigote
forms Leishmania donovani (visceral
leishmania) L. tropica: Cutaneous
leishmaniasis baziliensis
(Mucocutaneous).
• Plasmodium: Vivax, Malariae,
Falciparum Ovale, Life cycle shizogony
sporogony, Diagnosis,
• Thick and Thin Film. Stains used
cerebral malaria, malignant tertian fever,
Black water fever, Exo erythrocytic cycle.
Etc.
• Pnumocystis Carinii,
• Cryptosporidium etc.
Trematodes; tape worms or Liver
flukes.
– Clonorchiasis sinensis Chinese Liver
fluke, Fasicoliasis , fasicola hepatica,
buski.
– Paragonium westermani. Lung flukes.
Fish tape worm.
– Shistosomiasis, S. haematobium blood
flukes Liver intestinal bladder plexus ,
S. japonicum blood fluke, small
intestine liver, S. mansoni colon rectum
liver vessels
Cestodes, Tape worms.
– Taenia solium,
– T. saginata,
– Echinococcus granulosis: Life
Cycle Hydatid cyst.
– Hymenolepsis nana.
– Diphylobrothrum latum: Fish
tape worm.
Nematodes; Intestinal and Tissue , life cycles
intermediate and definitive hosts Nematodes.
• INTESTINAL NEMATODES
• Ascaris lumbricoides round worm.
• Ancylostoma duodenale hook worm.
• Nectar americanus: cousin of A. duodenale,
difference between the two
• Srrongyloides stercoralis.
• Trichuris trichuris. Whip worm.
• Trichenella spiralis.
• Larva migrans: Cutaneous creeping eruptions.
• Entrobius vermicularis: Cecum colon& anal
region. Scotch tape test.
TISSUE NEMATODES
• Wuscheria bancrofti: lymph nodes, Microfilaria
in blood. Mosquito bite , nocturnal.
• Brugia malayi: lymph nodes same habitat.
• Loa Loa: S.C. tissue migratory, eye microfilaria
in blood. Chrysops bite.
• Onchocerca volvulus: blinding worm, S.C.
tissue microfilaria in blood skin and eyes, black
fly.
• Dracunculus medinensis: S.C. tissue leg, foot.
• Toxocara species: cat and dog round worm :
Liver Lungs Eye Brain.
Some Important Questions in
Parasitology:
Name protozoa of medical importance,
differences between Entamoeba histolytica
and Ent. coli.
– Differences between amoebic and bacillary
dysentery.
– Intestinal and extra intestinal lesions of
amoeba.
– List Trematodes and give the life cycle
of……..
– List Cestodes and give the Life
Cycle of E. granulosis, how will you
diagnose a case of Hydatid cyst?
– Name hemoparasites, and describe
life cycle of plasmodium falciparum,
lab. Diagnosis and complications.
– Name Haemoflagellates and give life
cycle of…..
– List intestinal nematodes or tissue
nematodes and give the life cycle,
pathogenicity, diagnosis etc
of……………………
– Write short notes on a.
Acanthamoeba, Casoni test,
Toxoplasma gondi etc.
– Name Microfilaria and give the
vectors disease and diagnosis of
………
MYCOLOGY
• Classify fungi of medical importance.
• Superficial mycosis or Dermatophytes their
classification and diagnosis.
• S.C. fungi: Sporothrix Schenckii ,
Chromomycosis, Mycetoma.
• Deep seated fungal infections. Coccidioides
immitis , Histoplasma capsulatum,
Blastomycosis dermatidis,
• Opportunist Mycosis a. Candida albicans b.
Cryptococcus neoformans c. Aspergillosis d.
Zygomycosis ( Mucormycosis).
• Actinomycetes.
• Nocardia and related species.
• Lab. Diagnosis of fungal diseases.
• Short notes on Candida albicans,
Cryptococcus neoformans, Germ
tube test, etc.
• How do fungi cause disease, 1. .
Hypersensitivity, 2. Mycotoxicosis
3. Mycetismus 4. Infection.
VIROLOGY
• General Properties of Viruses; definition,
symmetry, type of disease, RNA & DNA
viruses.
• Differences between viruses and
bacteria.
• Classify RNA and DNA viruses and
mention some of the diseases they
produce.
• Oncogenic viruses.
• Lab. Diagnosis of Viral diseases.
• Virus isolation techniques.
• Arbo viruses.
• Name Hepatitis viruses ,and the
serological tests used to see the patient
status in Hep B infection during different
stages..
• Give the lab. Diagnosis of Hep c
infection: ELISA PCR VIRAL LOAD,
DNA PROBES, RIBA, WESTERN BLOT
etc.
• Latent viral infections.
• H.I.V. infection.
• EB virus, Cytomegalovirus
Mumps, Measles, Rubella virus.
• Short notes on Negri bodies,
inclusion bodies, Shingles,
Chicken pox…etc.
Any thing not included is also in
course.

2nd prof exams

  • 1.
    MICROBIOLOGY COURSE 3rd PROFESSIONALEXAMINATION 3RD YEAR. • General guide lines and course for the examination. • Study objectives. • Basic guidelines. Prof. Abbas Hayat
  • 2.
    GENERAL MICROBIOLOGY • Cellstructure – Optical methods. • 1. Light Microscope, Electron Microscope, Dark field illumination, Phase contrast. – Eukaryote and Prokaryote Cell structure. – Staining Methods. Grams stain Zeihl –Nelson, special stains – Differences between Gram positive & Gram negative cell wall. – Protoplasts, Spheroplasts and L forms. – Capsule, Flagella, Pili ( Fimbriaea). Endospores. – Morphologic changes during growth.
  • 3.
    • Microbial genetics. –Mutation, Intracellular Transfer & Genetic recombination, transformation. Transduction by bacteriophage. Plasmid mediated conjugation. •Cultivation of Microorganisms. Culture Medias, culturing techniques, Differential Medias, Selective Medias, Enriched Medias, Co2 incubation, anaerobic methods.
  • 4.
    • Antimicrobial Chemotherapy. –Mechanism of action and clinically used Anti microbial drugs. – Resistance to anti microbial agents. – Antibiotic Sensitivity Testing – Sterilization & Disinfectation. • Anti septic and Disinfectants. • Chemical methods. • Physical methods. Dry heat, Moist heat, Pasteurization, Tyndillization, Flaming, Hot air oven, autoclave, Ethylene Oxide, gamma radiations, UV light, etc.
  • 5.
    Sterilization & Disinfectation. –Anti septic and Disinfectants. – Chemical methods. – Physical methods. Dry heat, Moist heat, Pasteurization, Tyndillization, Flaming, Hot air oven, autoclave, Ethylene Oxide, gamma radiations, UV light, etc.
  • 6.
    Host- Parasite relationship –Infections – Attribute of Microorganism That Enable Them To Cause Disease. – Mechanisms of Non- Specific Host Resistance. – Resistance & Immunity. Natural Immunity. Acquired Immunity. Genetic influences.
  • 7.
    Miscellaneous • Differences between Exotoxinsand Endo toxins, Bacteria producing, and mode of action.
  • 8.
    Immunology: Antigens and Antibodies. –Definitions and cellular basis of Immune Response. – Antibodies: Structure and Formation. – Antigen-Antibodies Reactions. Serology, Precipitation reactions, gel diffusion tests, agglutination Reactions, Coombs test, Toxin- Antitoxin Reactions. Inhibition Reactions, Immunofluorescence
  • 9.
    – Electrophoresis. – Radioimmunoassay. –Enzyme Linked Immunoassays (ELISA). – Complement mediated reactions, and the Compliment fixation Test.
  • 10.
  • 11.
    Antibody –mediated &Cell Mediated Reactions. – Antibody =mediated hypersensitivity. – Anaphylaxis, Arthus Reaction, serum sickness, immune Complex Disease, drug hypersensitivity. – Cell Mediated & Hypersensitivity: Tuberculin Hypersensitivity. – Tests to evaluate cell mediated Hypersensitivity.
  • 12.
    – Role ofLipid waxes & Adjuvant. In development of cell mediated Reactions. – Auto immune Diseases. – Transplant immunity. – Tumor Immunity. – Transplant Immunity.
  • 13.
    SPECIAL MICROBIOLOGY: BACTERIA FUNGIAND VIRUSES OF MEDICAL IMPORTANCE • Pyogenic Cocci. – Staphylococci. Morphology Types Diseases, Culturing, Diagnosis Prevention, and Coagulase test. Catalane test. Methicillin Resistant Staphylococcus aureus MRSA. Etc – Streptococci and post streptococcal sequels. A.S.O. titer etc. – Pneumococci. Diseases Optochin Test etc – Neisseria: Morph. Culturing Types Diseases, Biochemical Oxidase test N. gonorrhoeae N. meningitidis. C.S.F. Findings etc.
  • 14.
    Gram Positive bacilli. –Aerobic spore forming: Bacillus Anthrax. – Anaerobic spore forming: Clostridium tetani, botulinum, perfringens difficile, Pseudomembraneous colitis, Gas gangrene etc. • Corynaebacterium. Morphology Types Diseases, Culturing, and Diagnosis Prevention: special stains, culturing, and Elks test. Shick test, effects of Exotoxins etc.
  • 15.
    • Mycobacteria Mycobacteriumtuberculosis’s, other Mycobacteria or atypical mycobacterium, Koch’s phenomenon. Mantoux test. Primary and reactivation disease, Diagnostic methods, MDRT. Treatment, D.O.T.`s etc. • Enteric gram negative bacteria Coli forms, lactose fermenters and non fermenters, diseases produced, e. coli Klebseilla Enterbacter Proteus , Pseudomonas, Salmonella, Shigella. TSI medium reactions • Vibrio cholera.
  • 16.
    Small gram negativerods. Brucella, Hemophilus influenzae and others, Bordetella pertussis. Campylobacter and Helicobacter species Morphology Types Diseases, Culturing , Diagnosis and prevention.
  • 17.
    • Spirochetes &Other Spiral organisms. – Treponema, Borrelia Leptospira. – Fusobacterium (Vincent’s angina).
  • 18.
    • Rickettsial diseases,classify, vectors involved Q fever, Weil Felix test, Morphology Types Diseases, Culturing ,Diagnosis Prevention etc. • Chlamydia. C. trachomitis, psittacosis, Genital tract infections, Respiratory Tract involvement (TWAR). Lymphogranuloma venereum, other agents.
  • 19.
    Mycoplasma species Non Gonococcalurethritis, Legionella pneumophilia, Listeria monocytogens.
  • 20.
    SOME IMPORTANT ORGANISMS ANDDISEASES. • Actinomyces Nocardia and Streptomyces. • Diagnostic techniques used in microbiology. Specimen collection, Processing of specimens, Staining, Urine, faces urine cultures etc. , Serology. • Causes of food poisoning prevention and diagnosis. • Causes of meningitis and C.S.F. findings in different types.
  • 21.
    • Causes UrinaryTract Infection and diagnosis and treatment. • Typhoid fever, classification of salmonella and diseases produced. Diagnosis, specimens during different stages of Disease, Widal test, Culture mediums, Typhi dot test, etc. • S.T.I`s and lab. diagnosis. esp. Serological Tests For Syphilis. • Hospital acquired infections and prevention.
  • 22.
    • Upper andlower Respiratory infections, and their diagnosis. • Pyogenic infections. • Zoonosis. • Urogenital tract infections. • Food borne infections. • Brain abscess and meningitis. • Intrauterine infections. • Routes of transmission of infections.
  • 23.
    • Infection ControlMethods. • Hepatitis.ABCD&E. • HIV and opportunist infections. • Emerging infections. Re emerging infections • Specimen collection and lab. Methods. • Sterilization techniques
  • 24.
    PARASITOLOGY • Life Cycles,Intermediate hosts, definitive hosts, vectors, diseases produced, diagnosis and treatment.
  • 25.
    Protozoa. • . Entamoebahistolytica other free Living Amoeba, Naeglaria, acanthamoeba. • Differences between Ent. Histolytica and Ent. coli. Species, differences between bacillary and amoebic dysentery, Intestinal and extra intestinal lesions of E. histolytica & E. coli • Giardia, Trichomonas, Balantidium coli.
  • 26.
    Haemoflagellates • Trypanosomiasis,I. sleepingsickness transmitted by Tse Tse fly trypansoma rhodesiense and Trypanosoma gambiense ii. American causing Chagas disease, transmitted by Tiresome Bug, Xeno diagnosis. • Leishmania amastigote and promastigote forms Leishmania donovani (visceral leishmania) L. tropica: Cutaneous leishmaniasis baziliensis (Mucocutaneous).
  • 27.
    • Plasmodium: Vivax,Malariae, Falciparum Ovale, Life cycle shizogony sporogony, Diagnosis, • Thick and Thin Film. Stains used cerebral malaria, malignant tertian fever, Black water fever, Exo erythrocytic cycle. Etc. • Pnumocystis Carinii, • Cryptosporidium etc.
  • 28.
    Trematodes; tape wormsor Liver flukes. – Clonorchiasis sinensis Chinese Liver fluke, Fasicoliasis , fasicola hepatica, buski. – Paragonium westermani. Lung flukes. Fish tape worm. – Shistosomiasis, S. haematobium blood flukes Liver intestinal bladder plexus , S. japonicum blood fluke, small intestine liver, S. mansoni colon rectum liver vessels
  • 29.
    Cestodes, Tape worms. –Taenia solium, – T. saginata, – Echinococcus granulosis: Life Cycle Hydatid cyst. – Hymenolepsis nana. – Diphylobrothrum latum: Fish tape worm.
  • 30.
    Nematodes; Intestinal andTissue , life cycles intermediate and definitive hosts Nematodes. • INTESTINAL NEMATODES • Ascaris lumbricoides round worm. • Ancylostoma duodenale hook worm. • Nectar americanus: cousin of A. duodenale, difference between the two • Srrongyloides stercoralis. • Trichuris trichuris. Whip worm. • Trichenella spiralis. • Larva migrans: Cutaneous creeping eruptions. • Entrobius vermicularis: Cecum colon& anal region. Scotch tape test.
  • 31.
    TISSUE NEMATODES • Wuscheriabancrofti: lymph nodes, Microfilaria in blood. Mosquito bite , nocturnal. • Brugia malayi: lymph nodes same habitat. • Loa Loa: S.C. tissue migratory, eye microfilaria in blood. Chrysops bite. • Onchocerca volvulus: blinding worm, S.C. tissue microfilaria in blood skin and eyes, black fly. • Dracunculus medinensis: S.C. tissue leg, foot. • Toxocara species: cat and dog round worm : Liver Lungs Eye Brain.
  • 32.
    Some Important Questionsin Parasitology: Name protozoa of medical importance, differences between Entamoeba histolytica and Ent. coli. – Differences between amoebic and bacillary dysentery. – Intestinal and extra intestinal lesions of amoeba. – List Trematodes and give the life cycle of……..
  • 33.
    – List Cestodesand give the Life Cycle of E. granulosis, how will you diagnose a case of Hydatid cyst? – Name hemoparasites, and describe life cycle of plasmodium falciparum, lab. Diagnosis and complications. – Name Haemoflagellates and give life cycle of…..
  • 34.
    – List intestinalnematodes or tissue nematodes and give the life cycle, pathogenicity, diagnosis etc of…………………… – Write short notes on a. Acanthamoeba, Casoni test, Toxoplasma gondi etc. – Name Microfilaria and give the vectors disease and diagnosis of ………
  • 35.
    MYCOLOGY • Classify fungiof medical importance. • Superficial mycosis or Dermatophytes their classification and diagnosis. • S.C. fungi: Sporothrix Schenckii , Chromomycosis, Mycetoma. • Deep seated fungal infections. Coccidioides immitis , Histoplasma capsulatum, Blastomycosis dermatidis, • Opportunist Mycosis a. Candida albicans b. Cryptococcus neoformans c. Aspergillosis d. Zygomycosis ( Mucormycosis).
  • 36.
    • Actinomycetes. • Nocardiaand related species. • Lab. Diagnosis of fungal diseases. • Short notes on Candida albicans, Cryptococcus neoformans, Germ tube test, etc. • How do fungi cause disease, 1. . Hypersensitivity, 2. Mycotoxicosis 3. Mycetismus 4. Infection.
  • 37.
    VIROLOGY • General Propertiesof Viruses; definition, symmetry, type of disease, RNA & DNA viruses. • Differences between viruses and bacteria. • Classify RNA and DNA viruses and mention some of the diseases they produce. • Oncogenic viruses.
  • 38.
    • Lab. Diagnosisof Viral diseases. • Virus isolation techniques. • Arbo viruses. • Name Hepatitis viruses ,and the serological tests used to see the patient status in Hep B infection during different stages.. • Give the lab. Diagnosis of Hep c infection: ELISA PCR VIRAL LOAD, DNA PROBES, RIBA, WESTERN BLOT etc.
  • 39.
    • Latent viralinfections. • H.I.V. infection. • EB virus, Cytomegalovirus Mumps, Measles, Rubella virus. • Short notes on Negri bodies, inclusion bodies, Shingles, Chicken pox…etc.
  • 40.
    Any thing notincluded is also in course.