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Energy and Enzymes
Learning Objectives
Enzymes and Energy of Life
1.Describe the energy transfers that are common to life.
2.Describe how cells use energy to do work.
3.Compare and contrast potential and kinetic energy.
4.Explain how physical laws constrain energy use in organisms.
5.Compare and contrast exergonic and endergonic reactions.
6.Explain how oxidation and reduction reactions are linked.
7.Explain how ATP is used in coupled reactions.
8.Explain how enzymes catalyze reactions.
9.Describe how negative and positive feedback regulate reaction rates.
10. Be able to explain homeostasis, feedback loops and their importance to
biology.
11.List the factors that influence enzyme activity.
12.Explain how acids and bases affect pH
13.Explain a gradient (thermal, concentration, etc.)
14.Indicate the direction of energy or material flow under different conditions
15.Predict the permeability of membranes under different conditions
2 Forms of Energy
• Kinetic Energy • Potential energy
Sunlight
(kinetic
energy)
Heat
energy
Potential
energy
Chemical energy
(potential energy)
available for
cellular tasks
Heat
energy
Cellular
respiration Sugar
Photosynthesis
H2O
CO2
O2
Figure 4.2
1st Law of Thermodynamics
2nd Law of Thermodynamics
Chemical Reactions Sustain Life
• Metabolism
• Endergonic Reactions
• Exergonic Reactions
Potential
energy
of
molecules
Potential
energy
of
molecules
Products
Energy must
be supplied
Reactants
Energy
required
Energy in Energy in
Energy
released
Energy out
Energy out
Energy is
released
Products
Reactants
Progress of reaction
Progress of reaction
Carbon
dioxide
Water Glucose Oxygen
Oxygen Glucose Carbon
dioxide
Water
Exergonic reactions release energy; products contain less energy than reactants
Endergonic reactions require energy input; products contain more energy than reactants
Figure 4.4
6CO2 6H2O
+ C6H12O6 6O2
+
6O2 C6H12O6
+ 6CO2 6H2O
+
Electrons ( ) are transferred
from donor to acceptor
Electron acceptor
molecule
Electron donor
molecule
Oxidation
Oxidized molecule Reduced molecule
Reduction
e-
e-
Figure 4.5
Redox Reactions
Proteins of electron transport chain
Electron donor
(molecule being
oxidized)
Electron acceptor
(molecule being
reduced)
Energy
Energy
Energy Energy
Membrane
High Potential energy
of electrons
Low
Figure 4.6
e−
e−
ATP = adenosine triphosphate
H2O
Energy
Hydrolysis
Figure 4.8
ADP
ATP
P P P
P
P P
ATP Hydrolysis
from exergonic
reactions
Energy
Energy
for endergonic
reactions
ATP hydrolysis
ATP synthesis
Figure 4.9
ADP
ATP H2O
P
+
Glucose
E.g., ATP provides the energy to build large molecules out of
small subunits
E.g., ATP binding changes shape of proteins involved in muscle
contraction
ATP energizes target molecule, making it more likely to bond
with other molecules.
ATP donates a phosphate group that changes the shape of
the target molecule.
Glucose
“activated”
by phosphate
group
Figure 4.10
Short polysaccharide Longer polysaccharide
Activated glucose
ATP ADP
P
P
P
P
P
ATP ATP ADP ADP
+ +
Enzymes as Catalysts
• Enzymes “speed up”
reactions by lowering
the “activation energy”
of a reaction.
• Enzymes DO NOT
change the overall
energy released in a
reaction.
22
Fig. 4.10
Activation energy
required with enzyme
Net energy
released in
reaction
Potential
energy
of
molecules
Activation energy
required without enzyme
Without enzyme
With enzyme
Reactants
Progress of reaction
Products
• Enzymes
• Activation Energy
• Active Site
• Cofactors
Products
Activation energy
required with enzyme
Potential
energy
of
molecules
Reactants
Activation energy
required without
enzyme
Net energy
released in
reaction
With enzyme
Without enzyme
Enzyme
Products
Enzyme-substrate complex
Substrate Active site
Enzyme
a.
b.
Figure 4.11
Enzyme from
human
Enzyme from
hot springs
bacterium
Low
High
Rate
of
reaction
Temperature (°C)
Human
body
37°C
30 40 50 60 70 80
Temperature
7
pH
pH
reaction
rate
2
0 1 3 4 5 6 8 9 10
stomach
pepsin
intestines
trypsin
11 12 13 14
Control of Reaction Rates
• Negative Feedback
• Noncompetitive Inhibition
• Competitive Inhibition
• Positive Feedback*
Substrate
Inhibitor
Enzyme
Competitive
inhibition
Noncompetitive
inhibition
Active site
Inhibitor
Normal
binding
Figure 4.14
Enzyme
1
Enzyme
2
Enzyme
3
Enzyme
4
Substrate Product
Negative feedback
Enzyme 4’s product inhibits
action of enzyme 1
Figure 4.13
2 Types of Homeostatic Control Mechanisms
Section 4.5
This image is a concentration gradient of black pixels, with high
concentration at the top and low concentration at the bottom.
At the top, the black pixels are
abundant and close together.
High concentration
of black pixels
Low concentration
of black pixels
At the bottom, the black pixels
are sparse.
“Gradient” Describes a Difference
Between Neighboring Regions
Movement Across Membranes:
A Summary
Table 4.2
Mechanism Characteristics
Passive
transport
Net movement is down concentration
gradient; does not require energy input.
Substance moves across membrane without
assistance from transport proteins.
Simple
diffusion
Water diffuses across a selectively
permeable membrane.
Osmosis
Substance moves across membrane with
assistance from transport proteins.
Facilitated
diffusion
Area of low
concentration
Area of high
concentration
Table 4.2 Contd.
Net movement is against concentration
gradient; requires transport protein and
energy input, often from ATP.
Transport in
vesicles
Vesicle carries large particles into or out of a
cell; requires energy input.
Active
transport
Endocytosis Membrane engulfs substance and draws it
into cell.
Exocytosis Vesicle fuses with cell membrane, releasing substances
outside of cell.
Membrane Transport Summary
Is the substance
nonpolar?
Yes
No
Is the substance
moving down its
concentration
gradient?
Yes
No
Is the substance
very large?
No
Yes
Is the substance
entering or
leaving the cell?
Exocytosis
Facilitated
diffusion
Simple diffusion
Active
transport
Entering Endocytosis
Leaving
Glucose
enters cell
by facilitated
Diffusion.
Enzymes break
starch into
glucose.
ATP is released into
cytosol.
In cellular
respiration, enzymes
in mitochondrion use
energy from glucose
to produce ATP.
ADP returns to
mitochondrion.
Endergonic
processes such as
active transport
use energy from
ATP hydrolysis.
Enzymes break glucose
into two pieces, which
enter mitochondrion.
Cytosol
Outside of cell
Starch
Starch hydrolysis
ATP production: P
P
Figure 4.24
Endergonic processes in this figure Exergonic processes in this figure
ADP + ATP H2O
+
Active transport Facilitated diffusion
Reactions of cellular respiration
ATP hydrolysis: H2O
ATP + ADP +
P
P P
P P P
Metabolism
Enzymes
Chemical reactions
Exergonic
Endergonic
Energy
Active
transport Potential
energy
Kinetic
energy
Concentration
gradient
Facilitated
diffusion
Simple
diffusion
ATP
consist of
are proteins
that catalyze
if they require
net input of
if they
release
is a molecule
that stores
requires
exists in two forms
creates
stores
dissipates
are
Figure 4.25

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1306 energy and enzymes

  • 2. Learning Objectives Enzymes and Energy of Life 1.Describe the energy transfers that are common to life. 2.Describe how cells use energy to do work. 3.Compare and contrast potential and kinetic energy. 4.Explain how physical laws constrain energy use in organisms. 5.Compare and contrast exergonic and endergonic reactions. 6.Explain how oxidation and reduction reactions are linked. 7.Explain how ATP is used in coupled reactions. 8.Explain how enzymes catalyze reactions. 9.Describe how negative and positive feedback regulate reaction rates. 10. Be able to explain homeostasis, feedback loops and their importance to biology. 11.List the factors that influence enzyme activity. 12.Explain how acids and bases affect pH 13.Explain a gradient (thermal, concentration, etc.) 14.Indicate the direction of energy or material flow under different conditions 15.Predict the permeability of membranes under different conditions
  • 3.
  • 4. 2 Forms of Energy • Kinetic Energy • Potential energy
  • 5.
  • 6. Sunlight (kinetic energy) Heat energy Potential energy Chemical energy (potential energy) available for cellular tasks Heat energy Cellular respiration Sugar Photosynthesis H2O CO2 O2 Figure 4.2
  • 7.
  • 8. 1st Law of Thermodynamics
  • 9. 2nd Law of Thermodynamics
  • 10.
  • 11. Chemical Reactions Sustain Life • Metabolism • Endergonic Reactions • Exergonic Reactions
  • 12. Potential energy of molecules Potential energy of molecules Products Energy must be supplied Reactants Energy required Energy in Energy in Energy released Energy out Energy out Energy is released Products Reactants Progress of reaction Progress of reaction Carbon dioxide Water Glucose Oxygen Oxygen Glucose Carbon dioxide Water Exergonic reactions release energy; products contain less energy than reactants Endergonic reactions require energy input; products contain more energy than reactants Figure 4.4 6CO2 6H2O + C6H12O6 6O2 + 6O2 C6H12O6 + 6CO2 6H2O +
  • 13. Electrons ( ) are transferred from donor to acceptor Electron acceptor molecule Electron donor molecule Oxidation Oxidized molecule Reduced molecule Reduction e- e- Figure 4.5 Redox Reactions
  • 14.
  • 15. Proteins of electron transport chain Electron donor (molecule being oxidized) Electron acceptor (molecule being reduced) Energy Energy Energy Energy Membrane High Potential energy of electrons Low Figure 4.6 e− e−
  • 16. ATP = adenosine triphosphate
  • 18.
  • 19. from exergonic reactions Energy Energy for endergonic reactions ATP hydrolysis ATP synthesis Figure 4.9 ADP ATP H2O P +
  • 20. Glucose E.g., ATP provides the energy to build large molecules out of small subunits E.g., ATP binding changes shape of proteins involved in muscle contraction ATP energizes target molecule, making it more likely to bond with other molecules. ATP donates a phosphate group that changes the shape of the target molecule. Glucose “activated” by phosphate group Figure 4.10 Short polysaccharide Longer polysaccharide Activated glucose ATP ADP P P P P P ATP ATP ADP ADP + +
  • 21.
  • 22. Enzymes as Catalysts • Enzymes “speed up” reactions by lowering the “activation energy” of a reaction. • Enzymes DO NOT change the overall energy released in a reaction. 22 Fig. 4.10 Activation energy required with enzyme Net energy released in reaction Potential energy of molecules Activation energy required without enzyme Without enzyme With enzyme Reactants Progress of reaction Products
  • 23.
  • 24. • Enzymes • Activation Energy • Active Site • Cofactors
  • 25. Products Activation energy required with enzyme Potential energy of molecules Reactants Activation energy required without enzyme Net energy released in reaction With enzyme Without enzyme Enzyme Products Enzyme-substrate complex Substrate Active site Enzyme a. b. Figure 4.11
  • 26.
  • 27. Enzyme from human Enzyme from hot springs bacterium Low High Rate of reaction Temperature (°C) Human body 37°C 30 40 50 60 70 80 Temperature
  • 28. 7 pH pH reaction rate 2 0 1 3 4 5 6 8 9 10 stomach pepsin intestines trypsin 11 12 13 14
  • 29.
  • 30. Control of Reaction Rates • Negative Feedback • Noncompetitive Inhibition • Competitive Inhibition • Positive Feedback*
  • 32. Enzyme 1 Enzyme 2 Enzyme 3 Enzyme 4 Substrate Product Negative feedback Enzyme 4’s product inhibits action of enzyme 1 Figure 4.13
  • 33. 2 Types of Homeostatic Control Mechanisms
  • 34. Section 4.5 This image is a concentration gradient of black pixels, with high concentration at the top and low concentration at the bottom. At the top, the black pixels are abundant and close together. High concentration of black pixels Low concentration of black pixels At the bottom, the black pixels are sparse. “Gradient” Describes a Difference Between Neighboring Regions
  • 35. Movement Across Membranes: A Summary Table 4.2 Mechanism Characteristics Passive transport Net movement is down concentration gradient; does not require energy input. Substance moves across membrane without assistance from transport proteins. Simple diffusion Water diffuses across a selectively permeable membrane. Osmosis Substance moves across membrane with assistance from transport proteins. Facilitated diffusion Area of low concentration Area of high concentration
  • 36. Table 4.2 Contd. Net movement is against concentration gradient; requires transport protein and energy input, often from ATP. Transport in vesicles Vesicle carries large particles into or out of a cell; requires energy input. Active transport Endocytosis Membrane engulfs substance and draws it into cell. Exocytosis Vesicle fuses with cell membrane, releasing substances outside of cell.
  • 37. Membrane Transport Summary Is the substance nonpolar? Yes No Is the substance moving down its concentration gradient? Yes No Is the substance very large? No Yes Is the substance entering or leaving the cell? Exocytosis Facilitated diffusion Simple diffusion Active transport Entering Endocytosis Leaving
  • 38. Glucose enters cell by facilitated Diffusion. Enzymes break starch into glucose. ATP is released into cytosol. In cellular respiration, enzymes in mitochondrion use energy from glucose to produce ATP. ADP returns to mitochondrion. Endergonic processes such as active transport use energy from ATP hydrolysis. Enzymes break glucose into two pieces, which enter mitochondrion. Cytosol Outside of cell Starch Starch hydrolysis ATP production: P P Figure 4.24 Endergonic processes in this figure Exergonic processes in this figure ADP + ATP H2O + Active transport Facilitated diffusion Reactions of cellular respiration ATP hydrolysis: H2O ATP + ADP + P P P P P P
  • 39. Metabolism Enzymes Chemical reactions Exergonic Endergonic Energy Active transport Potential energy Kinetic energy Concentration gradient Facilitated diffusion Simple diffusion ATP consist of are proteins that catalyze if they require net input of if they release is a molecule that stores requires exists in two forms creates stores dissipates are Figure 4.25