Light energy is converted to chemical energy through photosynthesis. In the light-dependent reactions, light is absorbed by chlorophyll in the thylakoid membranes which generates excited electrons. These electrons are used to produce ATP and NADPH. In the light-independent reactions that occur in the chloroplast stroma, CO2 is fixed into carbohydrates using ATP and NADPH produced in the light reactions. The structure of the chloroplast, including the thylakoid membranes, is adapted to efficiently carry out these photosynthetic reactions.
Organisms can be classified by how they get their energy and carbon- A (1).pdflonkarhrishikesh
Organisms can be classified by how they get their energy and carbon. Autotrophs ( "selffeeders")
use energy and carbon from inorgaric sources to create biological bonds through the process of
primary production. Heterotrophs ("other-feeders') consume other organisms to get energy and
the nutrition they need to survive. Ultimately, all heterotrophs rely on the primary production of
autotrophs. Photo-autotrophs are autotrophs that use light as an energy source for primary
production through the process of photosynthesis. Photosynthesis requires carbon dioxide, water,
and light energy to produce the simple sugar glucose, oxygen, and water. Light travels from the
sun in waves as photons. The distance a photon travels during one complete wave is its
wavelength. Energy values associated Figare 7-1. Fhotosynthesis cunverts light energy, with
photons increase as wavelengths decrease. Sunlight contains a wide range of wavelengths.
Photosynthesis is driven by a range of wavelengths that occur in the spectrum of visible light;
primarily within the range of red and blue. Energy from light is absorbed by pigments inside
cells. Chlorophyll a is the most common photosynthetic pigment although others do occur. Red,
orange, violet, and blue wavelengths ane absorbed by chlorophyll and green is reflected, thereby
causing the green appearance of plants. Solar energy is absorbed by pigments and is used to
excite electrons away from their atomic nucleus. Remember from lab 2 that electrons further
from the nucleus of an atom have more energy associated with them than those close to the
nucleus. This increase in electron energy can be harvested by the cell and used to form biologic
bonds during photosynthesis. In plants, chlorophyll a is stored in chloroplasts. Chloroplasts are
double membrane-bound organelles that contain several flattened membranous sacs called
thylakoid membranes that enclose the thylakoid space. The space between the thylakoid
membranes and the outer chloroplast membranes is called the stroma. Hundreds of chlorophyll
molecules are embedded in the thylakoid membranes, Chlorophyll, proteins, and various
pigments in an "antenna complex" absorb light energy and pass it to chlorophyll molecules and
proteins that make up the "reaction center." One of two chlorophyll molecules located in the
reaction center gives up an electron that is excited by the solar energy and the electron is passed
to the first protein in one of many electron transport chains in the thylakoid membranes, Reaction
center chlorophyll receives a replacement electron when additional light energy splits water
molecules, releasing oxygen gas and hydrogen ions. As the excited electron is passed along
adjacent molecules of the electron transport chain the energy of the electron is used to pump
hydrogen ions from the stroma into the thylakoid space. Because hydrogen ions are protons,
which are positively charged, an electrochemical gradient is established across the thylakoid
membranes w.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
DERIVATION OF MODIFIED BERNOULLI EQUATION WITH VISCOUS EFFECTS AND TERMINAL V...Wasswaderrick3
In this book, we use conservation of energy techniques on a fluid element to derive the Modified Bernoulli equation of flow with viscous or friction effects. We derive the general equation of flow/ velocity and then from this we derive the Pouiselle flow equation, the transition flow equation and the turbulent flow equation. In the situations where there are no viscous effects , the equation reduces to the Bernoulli equation. From experimental results, we are able to include other terms in the Bernoulli equation. We also look at cases where pressure gradients exist. We use the Modified Bernoulli equation to derive equations of flow rate for pipes of different cross sectional areas connected together. We also extend our techniques of energy conservation to a sphere falling in a viscous medium under the effect of gravity. We demonstrate Stokes equation of terminal velocity and turbulent flow equation. We look at a way of calculating the time taken for a body to fall in a viscous medium. We also look at the general equation of terminal velocity.
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
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What are greenhouse gasses how they affect the earth and its environment what is the future of the environment and earth how the weather and the climate effects.
What is greenhouse gasses and how many gasses are there to affect the Earth.
8.3 photosynthesis
1. Essential idea: Light energy is converted into chemical energy
8.3 Photosynthesis
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2. Understandings
Statement Guidance
8.3 U.1 Light-dependent reactions take place in the
thylakoid membranes and the space inside them.
8.3 U.2 Light-independent reactions take place in the
stroma.
8.3 U.3 Reduced NADP and ATP are produced in the light-
dependent reactions.
8.3 U.4 Absorption of light by photosystems generates
excited electrons.
8.3 U.5 Photolysis of water generates electrons for use in
the light-dependent reactions.
8.3 U.6 Transfer of excited electrons occurs between
carriers in thylakoid membranes.
8.3 U.7 Excited electrons from Photosystem II are used to
contribute to generate a proton gradient.
8.3 U.8 ATP synthase in thylakoids generates ATP using the
proton gradient.
8.3 U.9 Excited electrons from Photosystem I are used to
reduce NADP.
8.3 U.10 In the light-independent reactions a carboxylase
catalyzes the carboxylation of ribulose
bisphosphate.
3. Statement Guidance
8.3 U.11 Glycerate 3-phosphate is reduced to triose
phosphate using reduced NADP and ATP.
8.3 U.12 Triose phosphate is used to regenerate RuBP and
produce carbohydrates.
8.3 U.13 Ribulose bisphosphate is reformed using ATP.
8.3 U.14 The structure of the chloroplast is adapted to its
function in photosynthesis.
Understandings
4. Applications and Skills
Statement Guidance
8.3 A.1 Calvin’s experiment to elucidate the
carboxylation of RuBP.
8.3 S.1 Annotation of a diagram to indicate the
adaptations of a chloroplast to its
function.
5. 8.3 U.1 Light-dependent reactions take place in the thylakoid
membranes and the space inside them.
• Double outer membrane
• Thylakoids is the internal
membranes called which
is the location of the light
dependent reaction
• Grana are stacks of
thylakoids
• Stroma cytoplasm that
surrounding the
thylakoids and grana. This
is the location of the light
independent reaction.
6. Light energy converted into chemical energy
• Producers contain chlorophyll
• Chlorophyll can trap light
energy (photons).
• The chlorophyll convert this
energy into chemical energy.
• The chemical energy is
transferred as bond energy
(electrons)and is transferred in
turn to other chemical energy
stores called carbohydrates,
lipids and protein.
• These molecules are called
organic molecules.
8.3 U.1 Light-dependent reactions take place in the thylakoid
membranes and the space inside them.
7. 8.3 U.1 Light-dependent reactions take place in the thylakoid
membranes and the space inside them.
• Chlorophyll in the thylakoid
membrane is excited by light
absorption.
• Electrons (e-) in the chlorophyll
are energized to an excited
state.
• e- captured by primary electron
acceptor
Redox reaction e- transfer
As e- is transferred from one
enzyme to the next it drop
to a ground state
• H2O is split to replace e- O2
formed
8. 8.3 U.2 Light-independent reactions take place in the stroma.
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• Energy captured from the electron is transferred to NADPH
and ATP and move from the thylakoid into the stroma of the
chloroplast.
• Carbon dioxide will be converted into glycerate 3-
phosphate (G3P) a triose phosphate using NADPH and ATP.
9. 8.3 U.3 Reduced NADP and ATP are produced in the light-dependent
reactions.
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•At the same time water is
split into oxygen, hydrogen
ions and free electrons are
produced:
2H2O 4H+ + O2 + 4e-
(photolysis)
•The electrons then react
with a carrier molecule
(NADP), changing it from its
oxidized state (NADP+) to its
reduced state (NADPH):
NADP+ + 2e- + 2H+ NADPH + H+
10. 8.3 U.3 Reduced NADP and ATP are produced in the light-dependent
reactions.
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11.
12. 8.3 U.4 Absorption of light by photosystems generates excited electrons.
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• Pigments in the thylakoid
membrane absorb light at
certain wavelengths
• The light energy causes
electrons held by pigments to
raise to higher energy states.
This converts the light energy
into a form of chemical energy.
• These excited electrons are
passed from pigment to
pigment until the reach a
molecule called the reaction
center.
• The reaction center pass the
electrons to electron acceptors
in the thylakoid membrane
13. 8.3 U.9 Excited electrons from Photosystem I are used to reduce NADP.
• A pair of excited electrons
e- pass from the reaction
center of thylakoid into a
small electron transport
chain (ETC).
• At the end of the ETC the
electrons are passed to
NADP in the stroma.
• In addition NADP picks up
two protons (H+) and is
reduced to NADPH.
• NADPH will be used to fix
carbon from carbon dioxide
into a carbohydrate.
14.
15.
16.
17.
18.
19. 8.3 U.5 Photolysis of water generates electrons for use in the light-
dependent reactions.
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• Photosystem II must
replace excited
electrons given away
by chlorophyll
• With the help of an
enzyme in the reaction
center, water
molecules in the
thylakoid space are
split and electrons from
them are given to the
chlorophyll at the
reaction center.
20. 8.3 U.6 Transfer of excited electrons occurs between carriers in thylakoid
membranes.
21. 8.3 U.6 Transfer of excited electrons occurs between carriers in thylakoid
membranes.
22. 8.3 U.6 Transfer of excited electrons occurs between carriers in thylakoid
membranes.
23. 8.3 U.6 Transfer of excited electrons occurs between carriers in thylakoid
membranes.
24. 8.3 U.6 Transfer of excited electrons occurs between carriers in thylakoid
membranes.
25. Protons Build up Inside Thylakoids
8.3 U.7 Excited electrons from Photosystem II are used to contribute to
generate a proton gradient.
26. Proton motive force generated by:
(1) H+ from water
(2) H+ pumped across by cytochrome
(3) Removal of H+ from stroma when NADP+ is reduced
8.3 U.7 Excited electrons from Photosystem II are used to contribute to
generate a proton gradient.
27. 8.3 U.8 ATP synthase in thylakoids generates ATP using the proton
gradient.
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• ATP Synthase located
in the thylakoid
membranes allows the
protons to diffuse back
down the
concentration gradient
to produce ATP.
• The generation of ATP
using energy released
by the movement of
H+ is called
chemiosmosis and is
called
photophosphorylation
28. 8.3 U.8 ATP synthase in thylakoids generates ATP using the proton
gradient.
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29. Calvin Cycle: Uses ATP and NADPH to convert CO2 to sugar
• Uses ATP, NADPH, CO2
• Produces 3-C sugar G3P
(glyceraldehyde-3-phosphate)
Three phases:
1. Carbon fixation
2. Reduction
3. Regeneration of RuBP
(CO2 acceptor)
31. 1. Carbon Fixing phase
•Adds carbon dioxide to 5C
ribulose bisphosphate
(RuBP)
•Catalyzed into RUBISCO;
ribulose bisphosphate
carboxylase
8.3 U.10 In the light-independent reactions a carboxylase catalyzes the
carboxylation of ribulose bisphosphate (RuBp).
32. 2. Reduction phase
•Citrate is made and broken to
form 2 phosphoglycerate (PGA)
•PGA is rearranged and
phosphorylated by ATP
•NADPH reduces the backbone
further to form glyceraldehyde-3-
phosphate (G3P)
8.3 U.11 Glycerate 3-phosphate is reduced to triose phosphate using
reduced NADP and ATP.
33. 3. Regeneration of RuBP:
– G3P is rearranged,
– & phosphorylated
– With further investment of
ATP…
– To make RuBP, a
bisphosphorylated compound
• Alternatively,
– G3P is shuttled out of the
cycle to produce glucose and
other carbohydrates
elsewhere
8.3 U.12 Triose phosphate is used to regenerate RuBP and produce carbohydrates.
8.3 U.13 Ribulose bisphosphate is reformed using ATP.
34. 8.3 A.1 Calvin’s experiment to elucidate the carboxylation of RuBP.
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35. 8.3 A.1 Calvin’s experiment to elucidate the carboxylation of RuBP.
36. 8.3 A.1 Calvin’s experiment to elucidate the carboxylation of RuBP.
• A timer and a quick acting valve
were used to catch algae at
various stages of the light
independent reaction.
• Hot methanol kills algae; stops
photosynthesis.
• Radioactive carbon (C14) allows
the carbon containing
intermediates to be identified.
• The carbon compounds were
separated at each advancing
stage by chromatography and
identifying (results to the right).
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37. 8.3 U.14 The structure of the chloroplast is adapted to its function in
photosynthesis.
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• Outer membrane Consists of
inner and outer phospholipid
bilayers. The membrane helps
increase the concentration of
enzymes, increasing the rates
of reaction inside the
chloroplast.
• Thylakoids A flattened
membrane sac inside the
chloroplast increasing surface
area and concentration of
enzymes, used to convert
light energy into chemical
energy.
38. 8.3 S.1 Annotation of a diagram to indicate the adaptations of a
chloroplast to its function
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39. 8.3 S.1 Annotation of a diagram to indicate the adaptations of a
chloroplast to its function
• Chloroplast double membrane- Creates a compartment in
which enzymes and other components can be concentrated
• 70S Ribosome allows for the synthesis of proteins
• Stroma Matrix
• Circular DNA source for protein synthesis and mitosis
• Granum stack of thylakoids
• Thylakoids membrane/space increase surface area for light
absorption, which generates electron flow, with the space
providing and area to create a proton gradient
40. 8.3 S.1 Annotation of a diagram to indicate the adaptations of a
chloroplast to its function
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