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Comparative Biosafety Evaluation of
GM Canola

  Presented by: Saira Karimi

  M. Phil 2nd

  Plant Sciences
INTRODUCTION

With the advent of molecular gene technology, biologists have been able to
move novel gene constructs that are coupled with novel promoters into crop
plant genomes, creating transgenic plants.




enables the plants to express novel compounds, including insecticidal substances
that kill certain organisms when they feed on the transgenic crop.


The toxins released by these genetically modified plants are controversial and their effect
on associated weeds and soil rhizosphere is not totally explored. Therefore, the present
investigation is aimed on determination of adverse effects of genetically modified canola
on soil beneficial microbes and fertility, succeeding crop species as well as behavior of
gene flow from genetically modified maize and canola into surrounding interspecific
weeds.
Also , the hypothesis of present investigation is that whether
   gene flow occurs from genetically modified maize and canola
   into natural plants and genetically modified canola adversely
   affect the associated weed species, soil rhizosphere beneficial
   microbes and soil nutrient status and their effects on
   succeeding crop species.
Objectives

                           To analyzed the
                          root exudates of
         To investigate
                             genetically
        phenomenon of
                            modified and
           gene flow
                            non modified
                                crops.


           Effect of
                          To evaluate the
          genetically
                              effect of
         modified crop
                            genetically
            on soil
                          modified crops
          beneficial
                          on soil fertility
           microbes
Their seeds are used to
                                                         produce edible oil that is fit
                       Canola is one of two cultivars     for human consumption
                         of rapeseed or Brassica        because it has lower levels of
                           campestris                        erucicacid      than
                         (Brassica napus L. and B.      traditional rapeseed oils and
                              campestris L.).             to produce livestock feed
                                                        because it has reduced levels
                                                         of the toxic glucosinolates.




Fig 1: Canola blooms
Weed control and environmental
                 benefits

                               improved nutritional
                                     value




                              Canola is now the third
                              most important winter
                                                         weed control options
                               grain crop grown in
                                     Australia



                                                             GM canola with
                                   effect on wheat         tolerance to either
                              critically important for        glyphosate or
                                 the cropping belt.      glufosinate-ammonium
                                                                herbicides
Canola field in Temora, new
south whales
Why canola?


• The development of transgenic crops has especially raised
   some issues more especially the problem of environmental
   safety.
• Things that aren’t immediately obvious in the environment
   are the vast number of microorganisms that live in the soil.
• What will the impact be of GM crops on these?
Soil microorganisms play a vital role in natural cycles such as the
   carbon cycle and the nitrogen cycle. They are a source of plant
   nutrition, nutrient cycling, pesticide and pollutant
   decomposition and the source of soil fertility.
GM canola
• Herbicide-resistant GM canola is grown on about 80% of the
  acres in western Canada
• GM canola was first introduced in 1995.
• Growers reported an average 10% yield increase (3 bu/ac) for
  their GM canola compared to conventional canola (2001
  study).
• The factors that contributed to this increase included better
  yielding varieties, earlier seeding and better weed control.
• More experiments are needed to systematically examine the
  relationship among Bt toxin, soil microorganisms, and soil
  biochemical properties (Liu, 2009).
• Transgene products have also been shown to be released
  directly from the plant roots either from sloughed or
  damaged root cells as well as through root exudation.
  Transgenic Bt crops was found to release a Bacillus
  thuringiensis insecticidal endo-toxin from its roots (Saxena
  and Stotzky, 2000).
• Possibility of transgene flow from engineered crops to
  their wild relatives with undesirable consequences was
  independently recognized by several scientists (e.g.
  Colwell et al., 1985; Ellstrand, 1988; Dale, 1992).
• When genetic crossing between a transgenic plant and a
  non-modified strain occurs there is also some worry that
  the novel genetic material will disturb the entire genome,
  creating unknown and potentially dangerous side-effects
  (Mann 2002). Consumers also worry about the
  possibility for transgenic DNA to be toxic or easily
  integrated into their own genomes.
Hydroponic Experiment
       The root exudates will be analyzed according to method
                   described by Sun et al (2003).
    A hydroponic experiment is designed using two varieties
      of GM canola (B.napus), named Tornado and Telfor.
     Plant are given regular aeration by an aeration pump.

             Hoagland s solution is changed weekly.

     I started this experiment on 1st April now it is in 4th week
    Two non Gm varieties are also hydroponically grown as a
             control named Dunkled and Pakola.
Protocol for hydroponics
Hoagland's Solution (Plant Nutrient Solution)

Component                                Stock Solution                            mL Stock Solution/1L
2M KNO3                                    202g/L                                               2.5
2M Ca(NO3)2 x 4H2O                         236g/0.5L                                            2.5
Iron (Sprint 138 iron chelate)             15g/L                                                1.5
2M MgSO4 x 7H2O                            493g/L                                               1
1M NH4NO3                                  80g/L                                                1
Minors:                                                                                                   1
   H3BO3                                   2.86g/L
   MnCl2 x 4H2O                            1.81g/L
   ZnSO4 x 7H2O                            0.22g/L
   CuSO4                                   0.051g/L
   H3MoO4 x H2O or                         0.09g/L
Na2MoO4 x 2H2O                 0.12g/L
1M KH2PO4 (pH to 6.0           136g/L                                              0.5
      with 3M KOH)

1) Make up stock solutions and store in separate bottles with appropriate label.
2) Add each component to 800mL deionized water then fill to 1L.
3) After the solution is mixed, it is ready to water plants.
Hydroponics
Effect of GMO`s on soil chemistry
               Pot experiments will be
          conducted using GM canola. As I
          included hydroponic also, under
            control conditions as well as
          three different soil types will be
                       used.


           The soil will be
       Homogenized before used.

        The soil will be sampled
       at the start of experiment
       and also after completion
Chemical analysis



The soil will be analyzed for   The soil nutrient status as
bulk density organic matter     affected by GM canola will
  content, pH, total N,P,K,        be determined by the
  ammonium and nitrate.         method of Schwab (1977)
Effect on soil chemistry of genetically modified
(GM) vs. non-GM maize

                A study was conducted to find the effects of genetically
                   modified (GM) maize (Zea mays L.) expressing the
                Bacillus thuringiensis Berliner Cry1Fa2 protein (Bt) and
                    glyphosate herbicide tolerance on soil chemistry
               (organic matter, N, P, K and pH), compared with non-GM
                 controls, were assessed in field and pot experiments



                  Results indicate that growing GM crops instead of
                 conventional crops may alter soil chemistry, but not
                greatly, and that effects will vary with both the specific
                           genetic modification and the soil.
Soil Micro-organisms isolation and
characterization


                                   The rhizosphere
                                contains majority of
        Rhizosphere
                                 micro biota in soil
      microbes will be
                                 and plant-microbe
     under taken on the
                                  interaction in the
       basis of Colony
                                   rhizosphere are
      Counting by the
                                  among the major
      method of Miller
                                factors the regulate
           (1972)
                                 health and growth
                                      of plants.
ISB News Report


PLANT RESEARCH NEWS



A STRATEGY FOR TRANSGENE CONTAINMENT
IN PLANTS BASED ON THE REPRESSION OF A
SEED-LETHAL COMPONENT
Johann P. Schernthaner
Gene flow



                            The protein profile
                            of modified vs. non
                            modified crop
                            specie will be
       The DNA of GM        determined by PCR
       canola and non GM    and SDS-PAGE.
       variety named
       Dunkled and Pakola
       will be extracted
       through CTAB
       method.
Protocol for SDS-PAGE
Materials
To Pour Gels: 30% acrylamide, 10% SDS, 10% APS (make fresh each time)
TEMED, 1.5 M Tris, pH 8.8 (resolving gel),1.0 M Tris, pH 6.8 (stacking gel)
5x SDS Running Buffer (1 L).Tris 15 g.,Glycine 72 g
SDS 5 g, Coomassie Blue Stain, 10% (v/v) acetic acid
0.006% (w/v) Coomassie Blue dye
90% ddH2O, Isopropanol Fixing Solution
10% (v/v) acetic acid,25% (v/v) isopropanol, 65% ddH2O
SDS sample loading buffer (40 ml), ddH2O 16 ml, 0.5 M Tris, pH 6.8 5 ml
50% Glycerol 8 ml, 10% SDS 8 ml, 2βmercaptoethanol 2 ml (add immediately before use)
bromophenol blue, 10% (v/v) acetic acid
Protocol
1. Prepare polyacrylamide gel according to
    standard protocol.
2. Load samples and run gel @ 25 mA (2
    gels run @ 50 mA) in 1x SDS Running
Buffer.
3. At this point, the gel can either be
    transferred to a membrane (see
    Western protocol) or stained with
    Coomassie (see below).
4. Place gel in a plastic container. Cover
    with isopropanol fixing solution and
    shake
at room temperature. For 0.75 mm-thick
    gels, shake 10 to 15 min; for 1.5
    mmthick gels, shake 30 to 60 min.
5. Pour off fixing solution. Cover with
    Coomassie blue staining solution and
    shakeat RT for 2 hr.                     Apparatus used for SDS-PAGE
6. Pour off staining solution. Wash gel
    with 10% acetic acid to destain,
    shaking at RT ON
Confirmation of Stable gene integration


For the purpose to confirm the
stable integration of insecticidal
gene (BT cry1A and cry2A)in
canola molecular analysis like
PCR and Southern Blot will be
perform.
Southern blotting
Comparative biosafety evaluation of gm crops

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Comparative biosafety evaluation of gm crops

  • 1. Comparative Biosafety Evaluation of GM Canola Presented by: Saira Karimi M. Phil 2nd Plant Sciences
  • 2. INTRODUCTION With the advent of molecular gene technology, biologists have been able to move novel gene constructs that are coupled with novel promoters into crop plant genomes, creating transgenic plants. enables the plants to express novel compounds, including insecticidal substances that kill certain organisms when they feed on the transgenic crop. The toxins released by these genetically modified plants are controversial and their effect on associated weeds and soil rhizosphere is not totally explored. Therefore, the present investigation is aimed on determination of adverse effects of genetically modified canola on soil beneficial microbes and fertility, succeeding crop species as well as behavior of gene flow from genetically modified maize and canola into surrounding interspecific weeds.
  • 3. Also , the hypothesis of present investigation is that whether gene flow occurs from genetically modified maize and canola into natural plants and genetically modified canola adversely affect the associated weed species, soil rhizosphere beneficial microbes and soil nutrient status and their effects on succeeding crop species.
  • 4. Objectives To analyzed the root exudates of To investigate genetically phenomenon of modified and gene flow non modified crops. Effect of To evaluate the genetically effect of modified crop genetically on soil modified crops beneficial on soil fertility microbes
  • 5. Their seeds are used to produce edible oil that is fit Canola is one of two cultivars for human consumption of rapeseed or Brassica because it has lower levels of campestris erucicacid than (Brassica napus L. and B. traditional rapeseed oils and campestris L.). to produce livestock feed because it has reduced levels of the toxic glucosinolates. Fig 1: Canola blooms
  • 6. Weed control and environmental benefits improved nutritional value Canola is now the third most important winter weed control options grain crop grown in Australia GM canola with effect on wheat tolerance to either critically important for glyphosate or the cropping belt. glufosinate-ammonium herbicides Canola field in Temora, new south whales
  • 7. Why canola? • The development of transgenic crops has especially raised some issues more especially the problem of environmental safety. • Things that aren’t immediately obvious in the environment are the vast number of microorganisms that live in the soil. • What will the impact be of GM crops on these? Soil microorganisms play a vital role in natural cycles such as the carbon cycle and the nitrogen cycle. They are a source of plant nutrition, nutrient cycling, pesticide and pollutant decomposition and the source of soil fertility.
  • 8. GM canola • Herbicide-resistant GM canola is grown on about 80% of the acres in western Canada • GM canola was first introduced in 1995. • Growers reported an average 10% yield increase (3 bu/ac) for their GM canola compared to conventional canola (2001 study). • The factors that contributed to this increase included better yielding varieties, earlier seeding and better weed control.
  • 9. • More experiments are needed to systematically examine the relationship among Bt toxin, soil microorganisms, and soil biochemical properties (Liu, 2009). • Transgene products have also been shown to be released directly from the plant roots either from sloughed or damaged root cells as well as through root exudation. Transgenic Bt crops was found to release a Bacillus thuringiensis insecticidal endo-toxin from its roots (Saxena and Stotzky, 2000).
  • 10. • Possibility of transgene flow from engineered crops to their wild relatives with undesirable consequences was independently recognized by several scientists (e.g. Colwell et al., 1985; Ellstrand, 1988; Dale, 1992). • When genetic crossing between a transgenic plant and a non-modified strain occurs there is also some worry that the novel genetic material will disturb the entire genome, creating unknown and potentially dangerous side-effects (Mann 2002). Consumers also worry about the possibility for transgenic DNA to be toxic or easily integrated into their own genomes.
  • 11. Hydroponic Experiment The root exudates will be analyzed according to method described by Sun et al (2003). A hydroponic experiment is designed using two varieties of GM canola (B.napus), named Tornado and Telfor. Plant are given regular aeration by an aeration pump. Hoagland s solution is changed weekly. I started this experiment on 1st April now it is in 4th week Two non Gm varieties are also hydroponically grown as a control named Dunkled and Pakola.
  • 12. Protocol for hydroponics Hoagland's Solution (Plant Nutrient Solution) Component Stock Solution mL Stock Solution/1L 2M KNO3 202g/L 2.5 2M Ca(NO3)2 x 4H2O 236g/0.5L 2.5 Iron (Sprint 138 iron chelate) 15g/L 1.5 2M MgSO4 x 7H2O 493g/L 1 1M NH4NO3 80g/L 1 Minors: 1 H3BO3 2.86g/L MnCl2 x 4H2O 1.81g/L ZnSO4 x 7H2O 0.22g/L CuSO4 0.051g/L H3MoO4 x H2O or 0.09g/L Na2MoO4 x 2H2O 0.12g/L 1M KH2PO4 (pH to 6.0 136g/L 0.5 with 3M KOH) 1) Make up stock solutions and store in separate bottles with appropriate label. 2) Add each component to 800mL deionized water then fill to 1L. 3) After the solution is mixed, it is ready to water plants.
  • 14. Effect of GMO`s on soil chemistry Pot experiments will be conducted using GM canola. As I included hydroponic also, under control conditions as well as three different soil types will be used. The soil will be Homogenized before used. The soil will be sampled at the start of experiment and also after completion
  • 15. Chemical analysis The soil will be analyzed for The soil nutrient status as bulk density organic matter affected by GM canola will content, pH, total N,P,K, be determined by the ammonium and nitrate. method of Schwab (1977)
  • 16. Effect on soil chemistry of genetically modified (GM) vs. non-GM maize A study was conducted to find the effects of genetically modified (GM) maize (Zea mays L.) expressing the Bacillus thuringiensis Berliner Cry1Fa2 protein (Bt) and glyphosate herbicide tolerance on soil chemistry (organic matter, N, P, K and pH), compared with non-GM controls, were assessed in field and pot experiments Results indicate that growing GM crops instead of conventional crops may alter soil chemistry, but not greatly, and that effects will vary with both the specific genetic modification and the soil.
  • 17. Soil Micro-organisms isolation and characterization The rhizosphere contains majority of Rhizosphere micro biota in soil microbes will be and plant-microbe under taken on the interaction in the basis of Colony rhizosphere are Counting by the among the major method of Miller factors the regulate (1972) health and growth of plants.
  • 18. ISB News Report PLANT RESEARCH NEWS A STRATEGY FOR TRANSGENE CONTAINMENT IN PLANTS BASED ON THE REPRESSION OF A SEED-LETHAL COMPONENT Johann P. Schernthaner
  • 19. Gene flow The protein profile of modified vs. non modified crop specie will be The DNA of GM determined by PCR canola and non GM and SDS-PAGE. variety named Dunkled and Pakola will be extracted through CTAB method.
  • 20. Protocol for SDS-PAGE Materials To Pour Gels: 30% acrylamide, 10% SDS, 10% APS (make fresh each time) TEMED, 1.5 M Tris, pH 8.8 (resolving gel),1.0 M Tris, pH 6.8 (stacking gel) 5x SDS Running Buffer (1 L).Tris 15 g.,Glycine 72 g SDS 5 g, Coomassie Blue Stain, 10% (v/v) acetic acid 0.006% (w/v) Coomassie Blue dye 90% ddH2O, Isopropanol Fixing Solution 10% (v/v) acetic acid,25% (v/v) isopropanol, 65% ddH2O SDS sample loading buffer (40 ml), ddH2O 16 ml, 0.5 M Tris, pH 6.8 5 ml 50% Glycerol 8 ml, 10% SDS 8 ml, 2βmercaptoethanol 2 ml (add immediately before use) bromophenol blue, 10% (v/v) acetic acid
  • 21. Protocol 1. Prepare polyacrylamide gel according to standard protocol. 2. Load samples and run gel @ 25 mA (2 gels run @ 50 mA) in 1x SDS Running Buffer. 3. At this point, the gel can either be transferred to a membrane (see Western protocol) or stained with Coomassie (see below). 4. Place gel in a plastic container. Cover with isopropanol fixing solution and shake at room temperature. For 0.75 mm-thick gels, shake 10 to 15 min; for 1.5 mmthick gels, shake 30 to 60 min. 5. Pour off fixing solution. Cover with Coomassie blue staining solution and shakeat RT for 2 hr. Apparatus used for SDS-PAGE 6. Pour off staining solution. Wash gel with 10% acetic acid to destain, shaking at RT ON
  • 22. Confirmation of Stable gene integration For the purpose to confirm the stable integration of insecticidal gene (BT cry1A and cry2A)in canola molecular analysis like PCR and Southern Blot will be perform.