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Gene signatures associated with foot-and-mouth
disease virus infection and persistence
Part I: Persistent FMDV infection
in a three-dimensional model of
the bovine soft palate
Freiburg, August 24th 2018
Hägglund S.1*, Laloy E. 2*, Näslund K. 1*, Pfaff F. 3, Eschbaumer M. 3, Romey A. 2, Relmy A. 2,
Rikberg A.1, Svensson A.1, Huet, H. 2, Gorna K. 2, Beer M. 3, Zientara S. 2, Bakkali-Kassimi L. 2,
Blaise-Boisseau S.2* and Valarcher J.F. 1
* Contributed equally
Foot-and-mouth disease
• Countries classified with and without official status:
– free of FMD with and without vaccination
• Persistence in bovine oropharynx slows down recovery to FMDV-free status
– prevent access to the most profitable trade
Foot-and-mouth disease virus
• Positive-sensed, single stranded RNA virus
• Genus Aphtovirus, family Picornaviridae
• 30 nm sized naked capsids with high antigenic variation
– seven serotypes (O, A, C, SAT1, SAT2, SAT3 and Asia 1)
• multiple subtypes and lineages
• animals that harbor FMDV after day 28 are defined as carriers
Dyce 1993
Foot-and-mouth disease virus
• Persistent virus in up to 50% of infected cattle
• replicates in follicle-associated epithelium in the nasopharynx and soft palate
(Alexandersen et al., 2002; Arzt et al., 2011; Stenfeldt et al., 2016)
• cytokeratin-negative/ weakly positive cells in basal cell layers
(Arzt et al., 2011; Pacheco et al., 2015)
• highly cytokeratin-positive cells in the upper layers
(Stenfeldt et al., 2016)
• inactive form stored in the germinal centers of nasopharyngeal lymph nodes
(Juleff et al., 2008; Maree et al., 2016)
• Previous studies:
– animals
– monolayers of pharyngeal cells
– cell lines (BHK-1, IBRS-2 and MDBK)
• viral suppression of host immune responses
(Pacheco et al., 2015; Stenfeldt et al., 2016; Stenfeldt et al., 2017)
• adaptation of host cells to the virus
(de la Torre et al., 1988; Martin Hernandez et al., 1994)
• mutations in the viral genome leading to functional changes
• immune escape
(Gebauer et al., 1988)
• change in the use of receptors
(O'Donnell et al., 2014)
Foot-and-mouth disease virus
From Artz et al. Transbound Emerg Dis 2011
Aim
• Establish model of persistent infection in bovine soft palate multilayer
cells at the air interface
– future studies of virus-host interactions:
• viral changes/clearance in absence of selective pressure from the
immune system
• information on the pathways modulated by the virus in soft palate cells
• screening of molecules to detect or interfere in persistence
• spare experimental animals
• Epithelial tissue from dorsal soft plate collected after commercial slaughter:
– protease digestion and filtration
– removal of unwanted cells by adherence
– seeding in collagen-coated membrane inserts with 3.0 μm pores
– growth with hepatocyte-growth factor (mitogenic to keratinocytes/ inhibits fibrosis)
– upper compartment dried when cells were confluent
– washed upper cell layer/ changed culture medium every 2-3 days
• Possibility to keep at least 3 months without passage
Establishement of the model
• Before passage: expression of vimentin intermediate filaments less
extensive than cytokeratin
• After five passages: larger number of cells expressed vimentin. Cells were
mostly polygonal, round or flat
Cytokeratin Vimentin
Cell characterisation
Cytokeratin Vimentin
Cell characterisation
• Vimentin: fibroblast marker induced in cultured epithelial cells
(Pieper et al., 1992).
• Vimentin/cytokeratin: differential/simultaneous expression in epithelial cells
(Rogel et al., 2011; Kasper and Stosiek, 1990; Mendez et al., 2010; Eriksson et al., 2009).
 epithelial to mesenchymal transition (reversible process)
(Rogel et al., 2011; Mendez et al., 2010)
• Multilayers after five weeks, before infection
– Staining from top of membrane:
• subsets of cells expressed cytokeratin
• most or all cells were vimentin positive
– EM of cross-section:
• ~20 % of cells: polygonal morphology and tight junctions
– Impermeable to cell culture medium
Cytokeratin
Cell characterisation
• Expressed integrin αVβ6 to varying extent (a FMDV receptor) in
monolayers but not in multilayers
Integrin αVβ6
Cell characterisation
Persistent FMDV in SP cells
• Infection after 5 weeks of culture in multilayers, without further passage
– viral clone derived from the FMDV O/FRA/1/2001 strain
– wash of upper cell layer and change of culture medium every 2-3 days
Immunohistochemistry: made on cross sections of membranes
RT-qPCR:
virus isolation:
made on washes of cell surfaces
with cell culture medium
Persistent FMDV in SP cells
• Limited CPE in upper cell layers (peak at 24-48 hours)
• Recovery
Persistent FMDV in SP cells
0 2 4 6 8 1 0 1 2 1 4 1 6 1 8 2 0 2 2 2 4 2 6 2 8
2
4
6
8
d a y s p o s t in fe c tio n
TCID50/ml(log10)
0.4
E x p 3 , M O I 1
0 2 4 6 8 1 0 1 2 1 4 1 6 1 8 2 0 2 2 2 4 2 6 2 8
2
4
6
8
TCID50/ml(log10)
E xp 2 , M O I 0 .0 1
E xp 1 , M O I 0 .0 1
0.4
a)
b)
• 24-48 hours; peak of FMDV RNA and live virus
• day 28: FMDV isolated from 6 out of 8 cultures (undiluted)
Day 28: defective virus particles?
inhibition of live virus, by innate immune molecules?
1/3 positive
3/3 positive
2/3 positive
Persistent FMDV in SP cells
MOI1MOI0.01
isolation RT-qPCR
Persistent FMDV in SP cells
Persistent FMDV
• The proportion of infected cells was highest at 24 hours
• 3 % of cells at an MOI of 0.01
• 36 % of cells at an MOI of 1
• At day 28, FMDV antigen was detected in 0.2% - 2.1% of cells, in all
layers
Conclusion
• Development of a model of FMDV persistence in multilayer of
bovine soft palate cells grown at the air interface
• mimicking what is observed in vivo
• Virus was recovered without visible CPE, 28 days post infection
in 0.2-2% of cells. More work is required to characterise these
cells.
• Possibility to study mechanisms underlying persistence
• develop ways to control and diagnose persistent FMDV

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OS18 - 4.b.1 Gene signatures associated with FMD virus infection and persistence part I: Persistent FMDV infection in an air-liquid interface model of bovine soft palate - J. Valarcher

  • 1. Gene signatures associated with foot-and-mouth disease virus infection and persistence Part I: Persistent FMDV infection in a three-dimensional model of the bovine soft palate Freiburg, August 24th 2018 Hägglund S.1*, Laloy E. 2*, Näslund K. 1*, Pfaff F. 3, Eschbaumer M. 3, Romey A. 2, Relmy A. 2, Rikberg A.1, Svensson A.1, Huet, H. 2, Gorna K. 2, Beer M. 3, Zientara S. 2, Bakkali-Kassimi L. 2, Blaise-Boisseau S.2* and Valarcher J.F. 1 * Contributed equally
  • 2. Foot-and-mouth disease • Countries classified with and without official status: – free of FMD with and without vaccination • Persistence in bovine oropharynx slows down recovery to FMDV-free status – prevent access to the most profitable trade
  • 3. Foot-and-mouth disease virus • Positive-sensed, single stranded RNA virus • Genus Aphtovirus, family Picornaviridae • 30 nm sized naked capsids with high antigenic variation – seven serotypes (O, A, C, SAT1, SAT2, SAT3 and Asia 1) • multiple subtypes and lineages • animals that harbor FMDV after day 28 are defined as carriers Dyce 1993
  • 4. Foot-and-mouth disease virus • Persistent virus in up to 50% of infected cattle • replicates in follicle-associated epithelium in the nasopharynx and soft palate (Alexandersen et al., 2002; Arzt et al., 2011; Stenfeldt et al., 2016) • cytokeratin-negative/ weakly positive cells in basal cell layers (Arzt et al., 2011; Pacheco et al., 2015) • highly cytokeratin-positive cells in the upper layers (Stenfeldt et al., 2016) • inactive form stored in the germinal centers of nasopharyngeal lymph nodes (Juleff et al., 2008; Maree et al., 2016)
  • 5. • Previous studies: – animals – monolayers of pharyngeal cells – cell lines (BHK-1, IBRS-2 and MDBK) • viral suppression of host immune responses (Pacheco et al., 2015; Stenfeldt et al., 2016; Stenfeldt et al., 2017) • adaptation of host cells to the virus (de la Torre et al., 1988; Martin Hernandez et al., 1994) • mutations in the viral genome leading to functional changes • immune escape (Gebauer et al., 1988) • change in the use of receptors (O'Donnell et al., 2014) Foot-and-mouth disease virus From Artz et al. Transbound Emerg Dis 2011
  • 6. Aim • Establish model of persistent infection in bovine soft palate multilayer cells at the air interface – future studies of virus-host interactions: • viral changes/clearance in absence of selective pressure from the immune system • information on the pathways modulated by the virus in soft palate cells • screening of molecules to detect or interfere in persistence • spare experimental animals
  • 7. • Epithelial tissue from dorsal soft plate collected after commercial slaughter: – protease digestion and filtration – removal of unwanted cells by adherence – seeding in collagen-coated membrane inserts with 3.0 μm pores – growth with hepatocyte-growth factor (mitogenic to keratinocytes/ inhibits fibrosis) – upper compartment dried when cells were confluent – washed upper cell layer/ changed culture medium every 2-3 days • Possibility to keep at least 3 months without passage Establishement of the model
  • 8. • Before passage: expression of vimentin intermediate filaments less extensive than cytokeratin • After five passages: larger number of cells expressed vimentin. Cells were mostly polygonal, round or flat Cytokeratin Vimentin Cell characterisation
  • 9. Cytokeratin Vimentin Cell characterisation • Vimentin: fibroblast marker induced in cultured epithelial cells (Pieper et al., 1992). • Vimentin/cytokeratin: differential/simultaneous expression in epithelial cells (Rogel et al., 2011; Kasper and Stosiek, 1990; Mendez et al., 2010; Eriksson et al., 2009).  epithelial to mesenchymal transition (reversible process) (Rogel et al., 2011; Mendez et al., 2010)
  • 10. • Multilayers after five weeks, before infection – Staining from top of membrane: • subsets of cells expressed cytokeratin • most or all cells were vimentin positive – EM of cross-section: • ~20 % of cells: polygonal morphology and tight junctions – Impermeable to cell culture medium Cytokeratin Cell characterisation
  • 11. • Expressed integrin αVβ6 to varying extent (a FMDV receptor) in monolayers but not in multilayers Integrin αVβ6 Cell characterisation
  • 12. Persistent FMDV in SP cells • Infection after 5 weeks of culture in multilayers, without further passage – viral clone derived from the FMDV O/FRA/1/2001 strain – wash of upper cell layer and change of culture medium every 2-3 days
  • 13. Immunohistochemistry: made on cross sections of membranes RT-qPCR: virus isolation: made on washes of cell surfaces with cell culture medium Persistent FMDV in SP cells
  • 14. • Limited CPE in upper cell layers (peak at 24-48 hours) • Recovery Persistent FMDV in SP cells
  • 15. 0 2 4 6 8 1 0 1 2 1 4 1 6 1 8 2 0 2 2 2 4 2 6 2 8 2 4 6 8 d a y s p o s t in fe c tio n TCID50/ml(log10) 0.4 E x p 3 , M O I 1 0 2 4 6 8 1 0 1 2 1 4 1 6 1 8 2 0 2 2 2 4 2 6 2 8 2 4 6 8 TCID50/ml(log10) E xp 2 , M O I 0 .0 1 E xp 1 , M O I 0 .0 1 0.4 a) b) • 24-48 hours; peak of FMDV RNA and live virus • day 28: FMDV isolated from 6 out of 8 cultures (undiluted) Day 28: defective virus particles? inhibition of live virus, by innate immune molecules? 1/3 positive 3/3 positive 2/3 positive Persistent FMDV in SP cells MOI1MOI0.01 isolation RT-qPCR
  • 16. Persistent FMDV in SP cells Persistent FMDV • The proportion of infected cells was highest at 24 hours • 3 % of cells at an MOI of 0.01 • 36 % of cells at an MOI of 1 • At day 28, FMDV antigen was detected in 0.2% - 2.1% of cells, in all layers
  • 17. Conclusion • Development of a model of FMDV persistence in multilayer of bovine soft palate cells grown at the air interface • mimicking what is observed in vivo • Virus was recovered without visible CPE, 28 days post infection in 0.2-2% of cells. More work is required to characterise these cells. • Possibility to study mechanisms underlying persistence • develop ways to control and diagnose persistent FMDV