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Lecture 3: Unit-I: Bright-field & Dark-field Microscopy
23-November-2022
Durg Vijai Singh
Department of Biotechnology
Central University of South Bihar, Gaya
Light Microscopy
• Bright-field Microscopes
• Dark-field Microscopes
• Phase-contrast Microscopes
• Fluorescent Microscopes
Bright field Microscope
• Bright field Microscope is also known as the Compound Light Microscope.
• It is the simplest of all the optical microscopy illumination techniques.
• Sample illumination is transmitted (i.e., illuminated from below and
observed from above) white light, and contrast in the sample is caused by
attenuation of the transmitted light in dense areas of the sample.
• It is an optical microscope that uses light rays to produce a dark image
against a bright background.
• It is used in Biology, Cellular Biology, and Microbiological Laboratory
studies.
• This microscope is used to view fixed specimens, that have been stained with
basic stains, gives a contrast between the image and the image background.
• It is specially designed with magnifying glasses known as lenses that modify
the specimen to produce an image seen through the eyepiece.
Principle
• In Bright field Microscope, the specimen must pass through a uniform beam
of the illuminating light to be the focussed and produce an image.
• The microscope will produce a contrasting image through differential
absorption and differential refraction.
• The specimens used are stained to introduce color for easy contracting
characterization.
• The colored specimens will have a refractive index that will differentiate it
from the surrounding, presenting a combination of absorption and refractive
contrast.
• The microscope function is based on its ability to produce a high-resolution
image from an adequately provided light source, focused on the image,
producing a high-quality image.
• The specimen which is placed on a microscopic slide is viewed under oil
immersion or/and covered with a cover slip.
Parts of Microscope
Parts of Microscope
The bright field microscope is made up of various parts.
Eyepiece (Ocular lens) : it has two eyepiece lenses at the top of
the microscope which focuses the image from the objective
lenses. This is where you see the formed image from, with your
eyes.
The objective lenses: are made up of five or more glass lenses,
which make a clear image from the specimen or the object that is
being focused.
Two focusing knobs: The fine adjustment knob and the coarse
adjustment knob, found on the microscopes’ arm, which can move
the stage or the nose piece to focus on the image. Their function is
to ensure the production of a sharp image with clarity.
The stage: is found just below the objectives and this is where the
specimen is placed, allowing movement of the specimen around
for better viewing with the flexible knobs and it is where the light
is focused on.
Parts of Microscope
The condenser: It is mounted below the stage which focuses a
beam of light onto the specimen. It can be fixed or movable, to
adjust the quality of light, but this entirely depends on the
microscope.
The arm: This is a sturdy metallic backbone of the microscope,
used to carry and move the microscope from one place to another.
The arm and the base hold all the microscopic parts. It has a light
illuminator or a mirror found at the base or on the microscope’s
nose piece.
The nose piece: has about two to five objective lenses with
different magnifying power. It can move round to any position
depending on the objective lens to focus on the image.
An aperture diaphragm (contrast): It controls the diameter of
the beam of light that passes through the condenser. When the
condenser is almost closed, the light comes through to the center
of the condenser creating high contrast and when the condenser is
widely open, the image is very bright with very low contrast.
Magnification
• The objective lenses are the main lenses used for focusing the image, on the
condenser.
• This produces an enlarged clear image that is then magnified again by the eyepiece
to form the primary image that is seen by the eyes.
• During imaging, the objective lenses remain parfocal in that, even when the
objective lens has changed the image still remains focused.
• The image seen at the eyepiece is the enlarged clear image of the specimen, known
as the virtual image.
• The magnification of the image is determined by the magnification of the
objective against the magnification of the eyepiece lens. The objectives have a
magnification power of 40x-1000x depending on the type of bright field
microscope while the eyepiece lens has a standard magnification power of 10x.
• Numerical Aperture - of a microscope objective is the measure of its ability to
gather light and to resolve fine specimen detail while working at a fixed object (or
specimen) distance.
Magnification
Total Magnification power = Magnification of the objective lens x Magnification of the eyepiece
• For example: if the magnification of the objective is 40x and that of the eyepiece is
10x, the total magnification of the specimen will be 400x.
• The magnification is standard, i.e not too high nor too low, and therefore
depending on the magnification power of the lenses, it will range between 40X and
100X.
• The objective lens enlarges the image which can be viewed, a characteristic known
as resolution.
• Resolution according to Prescott, is the ability of a lens to separate or distinguish
between small objects closely linked together.
• Whereas the eyepiece magnifies the image at the end of the viewing, its
magnification range is lower than that of the objective lens at 8X-12X (10X
standard) and that of the objective lens at 40X-100X, magnification, and resolution
of the microscope is highly dependant on the objective lens.
Figure 1(a) reveals a human basal cell carcinoma stained with eosin and hematoxylin to generate color contrast in
bright field imaging mode. Figure 1(b) shows living HeLa cells in a plastic tissue culture vessel imaged with phase
contrast. A fixed culture of Indian Muntjac cells mounted in an aqueous medium are presented in differential
interference contrast (DIC) image in Figure 1(c). A fresh tissue section of mouse heart muscle bathed in aqueous
saline solution is displayed in the Figure 1(d) panel, where contrast is generated using Hoffman modulation (or ZEISS
VAREL) contrast, an oblique illumination technique. The brilliant bright-on-dark contrast observed with dark field
illumination is shown in Figure 1(e) using an Obelia hydroid specimen. Finally, rabbit skeletal muscle fibers (Figure
1(f)) are among the biological specimens that are birefringent and demonstrate contrast in polarized light.
Application
1. Used to understand cell structures in cell Biology, Microbiology, Bacteriology
to visualizing parasitic organisms in Parasitology.
2. Most of the specimens to viewed are stained using special staining to enable
visualization. Examples: Negative staining and Gram staining.
3. Some of its applications include:
• To visualize and study the animal cells
• To visualize and study plant cells.
• To visualize and study the morphologies of bacterial cells
• To identify parasitic protozoans such as Paramecium.
Advantages
1. It is simple to use with few adjustments involved while viewing the
image.
2. It can be used to view both stained and unstained.
3. The optics of the microscope do not alter the color of the specimen.
4. The microscope can be adjusted and modified for better viewing such
as installing a camera to form a digital microscope or
5. In the way image illumination is done such as by use of fluorochromes
on the specimen and viewing under a dark environment, forming a dark
field microscope.
Disadvantages
1. The aperture diaphragm may cause great contrast which may distort the image,
therefore iris diaphragm is preferred.
2. It cannot be used to view live specimens such as bacterial cells.
3. Only fixed specimens can be viewed under the bright field microscope.
4. Maximum magnification of the bright field microscope is 100x but modification can
readjust the magnification to 1000x, an optimum magnification of bacterial cells.
5. It has low contrast hence most specimens must be stained for them to be visualized.
6. Use of oil immersion may distort the image.
7. The use of cover slip may damage the specimen.
8. Staining may introduce extraneously unwanted details into the specimen or
contaminate the specimen.
9. It is tedious to stain the specimen before visualizing it under the bright field
microscope.
10. The microscope needs a strong light source for magnification and sometimes the
light source may produce a lot of heat which may damage or kill the specimen.
Steps Used in Microscopy
How does it works?
How does it works?
Koehler Illumination
Köhler illumination acts
to generate an even
illumination of the
sample and ensures that
an image of the
illumination source is not
visible in the resulting
image, uses transmitted
and reflected light optical
microscopy.
Koehler Illumination - Setting
Koehler Illumination - Setting Contd.
Care and Maintenance
Cleaning of Microscope
Care and Maintenance
Care and Maintenance
Examining Smear in the Microscope
Examining Smear in the Microscope
Trouble shooting
Trouble shooting
Trouble shooting Contd.
Trouble shooting Contd.
Trouble shooting Contd.
References
• Principle and Techniques of Biochemistry and Molecular Biology. Keith Wilson and
John Walker (Eds). 6th Edition. Cambridge University Press.
• Physical Biochemistry (Application to Biochemistry and Molecular Biology).David
Freeholder (Ed.) WH Freeman and Company, San Francisco.
• Willey, J. M., Sherwood, L., & Woolverton, C. Prescott’s Microbiology. New York: McGraw-
Hill (Page# 19-22).
• https://www.med.unc.edu/microscopy/files/2018/06/lm-ch-8-bright-field.pdf
• https://www.microscopemaster.com/brightfield-microscopy.html
• https://www.thomassci.com/scientific-supplies/Brightfield-Microscope
• https://www2.hawaii.edu/~johnb/micro/m140/syllabus/week/handouts/m140.2.4.html
• Microbenotes.com/microbiology
Light Microscopy
• Bright-field Microscopes
• Dark-field Microscopes
• Phase-contrast Microscopes
• Flourescent Microscopes
Dark field Microscope
• Microscopes are designated as either light microscopes or electron
microscopes.
• Light microscopes use visible light or ultraviolet rays to illuminate specimens.
• Brightfield, dark field, phase-contrast, and fluorescent MICROSCOPE.
• This is similar to the ordinary light microscope; however, the condenser system
is modified so that the specimen is not illuminated directly.
• The condenser directs the light obliquely so that the light is deflected or
scattered from the specimen, which then appears bright against a dark
background.
• Living specimens may be observed more readily with dark field than with
brightfield microscopy.
Component of Dark-Field Microscope and Image
Principle
1. In dark field microscope, the light source is blocked off, causing light to
scatter as it hits the specimen.
2. This is ideal for making objects with refractive values similar to the
background appear bright against a dark background.
3. When light hits an object, rays are scattered in all azimuths or directions.
4. The design of the dark field microscope is such that it removes the dispersed
light, or zeroth order, so that only the scattered beams hit the sample.
5. The introduction of a condenser and/or stop below the stage ensures that these
light rays will hit the specimen at different angles, rather than as a direct light
source above/below the object.
6. The result is a “cone of light” where rays are diffracted, reflected and/or
refracted off the object, ultimately, allowing the individual to view a
specimen in dark field.
Comparison between Bright field and Dark field Microscopes
Comparison between Bright field and Dark field Microscopes
Comparison between Bright field and Dark field Microscopes
How it Works?
1. The dark-ground microscopy makes use of the dark-ground, a special
type of compound light microscope.
2. The dark-field condenser with a central circular stop, which illuminates
the object with a cone of light, is the most essential part of the dark-
ground microscope.
3. This microscope uses reflected light instead of transmitted light used
in the ordinary light microscope.
4. It prevents light from falling directly on the objective lens.
5. Light rays falling on the object are reflected or scattered onto the
objective lens with the result that the microorganisms appear brightly
stained against a dark background.
Uses
• Demonstration of very thin bacteria not visible under ordinary illumination since
the reflection of the light makes them appear larger.
• Frequently used for demonstration of Treponema pallidum in clinical specimens.
• Demonstration of the motility of flagellated bacteria and protozoa.
• Dark field is used to study marine organisms such as algae, plankton, diatoms,
insects, fibers, hairs, yeast and protozoa as well as some minerals and crystals,
thin polymers and some ceramics.
• Used to study mounted cells and tissues.
• Useful in examining external details, such as outlines, edges, grain boundaries
and surface defects than internal structure.
Advantages
• It is a very simple yet effective technique.
• It is well suited for uses involving live and unstained biological samples,
such as a smear from a tissue culture or individual, water-borne, single-
celled organisms.
• Considering the simplicity of the setup, the quality of images obtained
from this technique is impressive.
• Dark-field microscopy techniques are almost entirely free of artifacts, due
to the nature of the process.
• A researcher can achieve a dark field by making modifications to his/her
microscope.
References
• Principle and Techniques of Biochemistry and Molecular Biology. Keith Wilson and John Walker (Eds).
6th Edition. Cambridge University Press.
• Physical Biochemistry (Application to Biochemistry and Molecular Biology).David Freifelder (Ed.) WH
Freeman and Company, San Francisco.
• Parija S.C. (2012). Textbook of Microbiology & Immunology.(2 ed.). India: Elsevier India.
• Cappuccino, J. and Welsh, C. (2014). Microbiology: A Laboratory Manual, Global Edition. 1st ed. Pearson
Education.
• Sastry A.S. & Bhat S.K. (2016). Essentials of Medical Microbiology. New Delhi : Jaypee Brothers Medical
Publishers.
• Trivedi P.C., Pandey S, and Bhadauria S. (2010). Textbook of Microbiology. Pointer Publishers; First edition
• Patskovsky; et al. (2014). “Wide-field hyperspectral 3D imaging of functionalized gold nanoparticles
targeting cancer cells by reflected light microscopy”. Biophotonics. 8 (5): 1–7
• https://www.microscopemaster.com/dark-field-microscope.html
• Microbenotes.com/microbiology

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Lecture 3 Unit-I Bright-field & Dark-field Microscopy.pdf

  • 1. Lecture 3: Unit-I: Bright-field & Dark-field Microscopy 23-November-2022 Durg Vijai Singh Department of Biotechnology Central University of South Bihar, Gaya
  • 2. Light Microscopy • Bright-field Microscopes • Dark-field Microscopes • Phase-contrast Microscopes • Fluorescent Microscopes
  • 3. Bright field Microscope • Bright field Microscope is also known as the Compound Light Microscope. • It is the simplest of all the optical microscopy illumination techniques. • Sample illumination is transmitted (i.e., illuminated from below and observed from above) white light, and contrast in the sample is caused by attenuation of the transmitted light in dense areas of the sample. • It is an optical microscope that uses light rays to produce a dark image against a bright background. • It is used in Biology, Cellular Biology, and Microbiological Laboratory studies. • This microscope is used to view fixed specimens, that have been stained with basic stains, gives a contrast between the image and the image background. • It is specially designed with magnifying glasses known as lenses that modify the specimen to produce an image seen through the eyepiece.
  • 4. Principle • In Bright field Microscope, the specimen must pass through a uniform beam of the illuminating light to be the focussed and produce an image. • The microscope will produce a contrasting image through differential absorption and differential refraction. • The specimens used are stained to introduce color for easy contracting characterization. • The colored specimens will have a refractive index that will differentiate it from the surrounding, presenting a combination of absorption and refractive contrast. • The microscope function is based on its ability to produce a high-resolution image from an adequately provided light source, focused on the image, producing a high-quality image. • The specimen which is placed on a microscopic slide is viewed under oil immersion or/and covered with a cover slip.
  • 6. Parts of Microscope The bright field microscope is made up of various parts. Eyepiece (Ocular lens) : it has two eyepiece lenses at the top of the microscope which focuses the image from the objective lenses. This is where you see the formed image from, with your eyes. The objective lenses: are made up of five or more glass lenses, which make a clear image from the specimen or the object that is being focused. Two focusing knobs: The fine adjustment knob and the coarse adjustment knob, found on the microscopes’ arm, which can move the stage or the nose piece to focus on the image. Their function is to ensure the production of a sharp image with clarity. The stage: is found just below the objectives and this is where the specimen is placed, allowing movement of the specimen around for better viewing with the flexible knobs and it is where the light is focused on.
  • 7. Parts of Microscope The condenser: It is mounted below the stage which focuses a beam of light onto the specimen. It can be fixed or movable, to adjust the quality of light, but this entirely depends on the microscope. The arm: This is a sturdy metallic backbone of the microscope, used to carry and move the microscope from one place to another. The arm and the base hold all the microscopic parts. It has a light illuminator or a mirror found at the base or on the microscope’s nose piece. The nose piece: has about two to five objective lenses with different magnifying power. It can move round to any position depending on the objective lens to focus on the image. An aperture diaphragm (contrast): It controls the diameter of the beam of light that passes through the condenser. When the condenser is almost closed, the light comes through to the center of the condenser creating high contrast and when the condenser is widely open, the image is very bright with very low contrast.
  • 8. Magnification • The objective lenses are the main lenses used for focusing the image, on the condenser. • This produces an enlarged clear image that is then magnified again by the eyepiece to form the primary image that is seen by the eyes. • During imaging, the objective lenses remain parfocal in that, even when the objective lens has changed the image still remains focused. • The image seen at the eyepiece is the enlarged clear image of the specimen, known as the virtual image. • The magnification of the image is determined by the magnification of the objective against the magnification of the eyepiece lens. The objectives have a magnification power of 40x-1000x depending on the type of bright field microscope while the eyepiece lens has a standard magnification power of 10x. • Numerical Aperture - of a microscope objective is the measure of its ability to gather light and to resolve fine specimen detail while working at a fixed object (or specimen) distance.
  • 9. Magnification Total Magnification power = Magnification of the objective lens x Magnification of the eyepiece • For example: if the magnification of the objective is 40x and that of the eyepiece is 10x, the total magnification of the specimen will be 400x. • The magnification is standard, i.e not too high nor too low, and therefore depending on the magnification power of the lenses, it will range between 40X and 100X. • The objective lens enlarges the image which can be viewed, a characteristic known as resolution. • Resolution according to Prescott, is the ability of a lens to separate or distinguish between small objects closely linked together. • Whereas the eyepiece magnifies the image at the end of the viewing, its magnification range is lower than that of the objective lens at 8X-12X (10X standard) and that of the objective lens at 40X-100X, magnification, and resolution of the microscope is highly dependant on the objective lens.
  • 10. Figure 1(a) reveals a human basal cell carcinoma stained with eosin and hematoxylin to generate color contrast in bright field imaging mode. Figure 1(b) shows living HeLa cells in a plastic tissue culture vessel imaged with phase contrast. A fixed culture of Indian Muntjac cells mounted in an aqueous medium are presented in differential interference contrast (DIC) image in Figure 1(c). A fresh tissue section of mouse heart muscle bathed in aqueous saline solution is displayed in the Figure 1(d) panel, where contrast is generated using Hoffman modulation (or ZEISS VAREL) contrast, an oblique illumination technique. The brilliant bright-on-dark contrast observed with dark field illumination is shown in Figure 1(e) using an Obelia hydroid specimen. Finally, rabbit skeletal muscle fibers (Figure 1(f)) are among the biological specimens that are birefringent and demonstrate contrast in polarized light.
  • 11. Application 1. Used to understand cell structures in cell Biology, Microbiology, Bacteriology to visualizing parasitic organisms in Parasitology. 2. Most of the specimens to viewed are stained using special staining to enable visualization. Examples: Negative staining and Gram staining. 3. Some of its applications include: • To visualize and study the animal cells • To visualize and study plant cells. • To visualize and study the morphologies of bacterial cells • To identify parasitic protozoans such as Paramecium.
  • 12. Advantages 1. It is simple to use with few adjustments involved while viewing the image. 2. It can be used to view both stained and unstained. 3. The optics of the microscope do not alter the color of the specimen. 4. The microscope can be adjusted and modified for better viewing such as installing a camera to form a digital microscope or 5. In the way image illumination is done such as by use of fluorochromes on the specimen and viewing under a dark environment, forming a dark field microscope.
  • 13. Disadvantages 1. The aperture diaphragm may cause great contrast which may distort the image, therefore iris diaphragm is preferred. 2. It cannot be used to view live specimens such as bacterial cells. 3. Only fixed specimens can be viewed under the bright field microscope. 4. Maximum magnification of the bright field microscope is 100x but modification can readjust the magnification to 1000x, an optimum magnification of bacterial cells. 5. It has low contrast hence most specimens must be stained for them to be visualized. 6. Use of oil immersion may distort the image. 7. The use of cover slip may damage the specimen. 8. Staining may introduce extraneously unwanted details into the specimen or contaminate the specimen. 9. It is tedious to stain the specimen before visualizing it under the bright field microscope. 10. The microscope needs a strong light source for magnification and sometimes the light source may produce a lot of heat which may damage or kill the specimen.
  • 14.
  • 15. Steps Used in Microscopy
  • 16. How does it works?
  • 17. How does it works?
  • 18. Koehler Illumination Köhler illumination acts to generate an even illumination of the sample and ensures that an image of the illumination source is not visible in the resulting image, uses transmitted and reflected light optical microscopy.
  • 20. Koehler Illumination - Setting Contd.
  • 25. Examining Smear in the Microscope
  • 26. Examining Smear in the Microscope
  • 32. References • Principle and Techniques of Biochemistry and Molecular Biology. Keith Wilson and John Walker (Eds). 6th Edition. Cambridge University Press. • Physical Biochemistry (Application to Biochemistry and Molecular Biology).David Freeholder (Ed.) WH Freeman and Company, San Francisco. • Willey, J. M., Sherwood, L., & Woolverton, C. Prescott’s Microbiology. New York: McGraw- Hill (Page# 19-22). • https://www.med.unc.edu/microscopy/files/2018/06/lm-ch-8-bright-field.pdf • https://www.microscopemaster.com/brightfield-microscopy.html • https://www.thomassci.com/scientific-supplies/Brightfield-Microscope • https://www2.hawaii.edu/~johnb/micro/m140/syllabus/week/handouts/m140.2.4.html • Microbenotes.com/microbiology
  • 33. Light Microscopy • Bright-field Microscopes • Dark-field Microscopes • Phase-contrast Microscopes • Flourescent Microscopes
  • 34. Dark field Microscope • Microscopes are designated as either light microscopes or electron microscopes. • Light microscopes use visible light or ultraviolet rays to illuminate specimens. • Brightfield, dark field, phase-contrast, and fluorescent MICROSCOPE. • This is similar to the ordinary light microscope; however, the condenser system is modified so that the specimen is not illuminated directly. • The condenser directs the light obliquely so that the light is deflected or scattered from the specimen, which then appears bright against a dark background. • Living specimens may be observed more readily with dark field than with brightfield microscopy.
  • 35. Component of Dark-Field Microscope and Image
  • 36. Principle 1. In dark field microscope, the light source is blocked off, causing light to scatter as it hits the specimen. 2. This is ideal for making objects with refractive values similar to the background appear bright against a dark background. 3. When light hits an object, rays are scattered in all azimuths or directions. 4. The design of the dark field microscope is such that it removes the dispersed light, or zeroth order, so that only the scattered beams hit the sample. 5. The introduction of a condenser and/or stop below the stage ensures that these light rays will hit the specimen at different angles, rather than as a direct light source above/below the object. 6. The result is a “cone of light” where rays are diffracted, reflected and/or refracted off the object, ultimately, allowing the individual to view a specimen in dark field.
  • 37. Comparison between Bright field and Dark field Microscopes
  • 38. Comparison between Bright field and Dark field Microscopes
  • 39. Comparison between Bright field and Dark field Microscopes
  • 40. How it Works? 1. The dark-ground microscopy makes use of the dark-ground, a special type of compound light microscope. 2. The dark-field condenser with a central circular stop, which illuminates the object with a cone of light, is the most essential part of the dark- ground microscope. 3. This microscope uses reflected light instead of transmitted light used in the ordinary light microscope. 4. It prevents light from falling directly on the objective lens. 5. Light rays falling on the object are reflected or scattered onto the objective lens with the result that the microorganisms appear brightly stained against a dark background.
  • 41. Uses • Demonstration of very thin bacteria not visible under ordinary illumination since the reflection of the light makes them appear larger. • Frequently used for demonstration of Treponema pallidum in clinical specimens. • Demonstration of the motility of flagellated bacteria and protozoa. • Dark field is used to study marine organisms such as algae, plankton, diatoms, insects, fibers, hairs, yeast and protozoa as well as some minerals and crystals, thin polymers and some ceramics. • Used to study mounted cells and tissues. • Useful in examining external details, such as outlines, edges, grain boundaries and surface defects than internal structure.
  • 42. Advantages • It is a very simple yet effective technique. • It is well suited for uses involving live and unstained biological samples, such as a smear from a tissue culture or individual, water-borne, single- celled organisms. • Considering the simplicity of the setup, the quality of images obtained from this technique is impressive. • Dark-field microscopy techniques are almost entirely free of artifacts, due to the nature of the process. • A researcher can achieve a dark field by making modifications to his/her microscope.
  • 43. References • Principle and Techniques of Biochemistry and Molecular Biology. Keith Wilson and John Walker (Eds). 6th Edition. Cambridge University Press. • Physical Biochemistry (Application to Biochemistry and Molecular Biology).David Freifelder (Ed.) WH Freeman and Company, San Francisco. • Parija S.C. (2012). Textbook of Microbiology & Immunology.(2 ed.). India: Elsevier India. • Cappuccino, J. and Welsh, C. (2014). Microbiology: A Laboratory Manual, Global Edition. 1st ed. Pearson Education. • Sastry A.S. & Bhat S.K. (2016). Essentials of Medical Microbiology. New Delhi : Jaypee Brothers Medical Publishers. • Trivedi P.C., Pandey S, and Bhadauria S. (2010). Textbook of Microbiology. Pointer Publishers; First edition • Patskovsky; et al. (2014). “Wide-field hyperspectral 3D imaging of functionalized gold nanoparticles targeting cancer cells by reflected light microscopy”. Biophotonics. 8 (5): 1–7 • https://www.microscopemaster.com/dark-field-microscope.html • Microbenotes.com/microbiology