Myself Omkar Tipugade , M - Pharm sem II , department of Pharmaceutics , today will upload presentation on Computational modeling in drug disposition .
1. COMPUTATIONAL MODELING IN DRUG
DISPOSITION
Mr. Omkar Tipugade
M-pharm , Sem –II ( Pharmaceutics )
Shree Santkrupa College Of Pharmacy ,Ghogaon.
2. CONTENT:
Introduction
Modelling technique
Quantitative approach
Qualitative approach
Drug absorption
Solubility
Intestinal permeation
Drug distribution
Volume of distribution
Plasma protein binding
BBB
Drug excretion
Active transporter
3. INTRODUCTION:
Historically ,drug discovery has focused almost exclusively on efficacy and
selectivity against the biological target.
Drug candidates fail at phase II & III clinical trial because of undesirable drug PK
properties including ADME & toxicity.
To reduce the attrition rate at more expensive later stage , in-vitro evaluation of
ADME properties in the early phase of drug discovery has widely adopted.
Many high throughput in-vitro ADMET property screening assay have developed
& applied successfully .
Fueled by ever increasing computational power & significant advance of in silico
modeling algorithms , numerous computational program that aim at modeling
ADMET properties have emerged.
A comprehensive list of available commercial ADMET modeling software has
been provided till date.
5. MODELLING TECHNIQUE
2 Approache
a) Quantitative approach :
Represented by pharmacophore modeling & flexible docking studies investigate
the strutural requirement for the interaction between drug & target that are
involved in ADMET process.
These are especially useful when these is an accumulation of knowledge against
certain target E.g., a set of drug known to be transported by transporter would
enable a pharmacophore study to elucidate the minimum required structure
feature for transport.
3 widely used automated pharmacophore perception tool are DISCO ( Distance
Comparion ) , GASP ( Genetic Algorithm Similarity Program ) & Catalyst.
b) Qualitative approaches :
Presented by QSAR & QSPR studies utilize multivarible analysis to corelate
molecular description with ADMET related proprties
It is essential to select the right mathematical tool for most effective ADMET
modeling. Sometime it is necessary to apply multiple stastical method & compare
the result to identify the best approaches.
6. DRUG ABSORPTION :
Because of its convenience & good patient compliance oral administration is the
most prefered drug delivery form.
As a result , much of the attention of in silico approaches is focused on modeling
drug oral absorption which occuar in the human intestine.
In general , drug bioavailability & drug absorption is the result of the interplay
between drug solubility & intestinal permeability .
a) Solubility :
A drug generally must dissolve before it can be absorbed from intestinal lumen .
By measuring a drug log P value ( log of partition coefficient of compound
between water & n octanol ) its MP , the would indirectly solubility using general
solubility equation.
7. There are two approaches to model solubility , one is based on the underlying
physiological processes & the other is an empirical approach . The dissolution
process involve the breaking up of solute from its crystal lattice & association of
the solute or solvent molecule.
To predict the solubility of compound even before synthesizing its , in silico
modeling can be implemented .
Empirical approaches represented by QSAR , utilize multivariable analysis to
identify correlation between molecular descriptor & solubility.
b) Intestinal permeation :
Describe the ability of drug to across the intestinal mucosa separating the gut
lumen from the portal circulation .
It is an essential process for drug to pass the intestinal membrane before entering
the systematic circulation to reach their target site of action
Process involve both passive & active transport
Is a complex process that is difficult to predict solely based on molecular
mechanism .
8. DRUG DISTRIBUTION :
is an important aspect of drug PK profile .
The structure & physiochemical properties of drug determine the extent of
distribution which is mainly reflected by three parameter.
1. Volume of distribution :
Is a measure of relative partitioning of drug between plasma & tissue an imp
proportional constant that when combined drug is a major determination of how
often the drug should administration .
However , because of the scaricity of in-vivo data model that are capble of
prediction Vd based safety on computed descriptors an still under development .
2. Plasma – protein binding :
Drug binding to variety of plasma protein such as albumin , as unbound drug
primarily contribute its pharmacological efficacy .
The effect of PPB is an imp consideration whwn evaluting the effective drug
plasma conc.
9. The model proposed to predict PPB should not on the binding data of only one
protein when predicting plasma protein binding because it is a composite
parameter reflecting interaction with multiple protein .
3. BBB:
Maintain the restricted extracellular environment in the central nerve system.
The evalution of drug penetration through BBB is an integral part of drug
discovery & development processs.
Again , because of few experimental data derived from inconsistant protocol ,
most BBB permeation prediction model an are of limited practical use despite
intensive effort
Most approaches model log blood brain which is a measurement of drug
partitioning between blood & brain tissue
Measurement is an indirect implication of BBB permeability which does not
discriminate between free & plasma protein bound solute.
10. DRUG EXCRETION :
The excretion or clearance of drug is quantified by plasma clearance , which is
defined as plasma volume that has cleared completely free of drug per unit of
time .
Together with Vd, it can assist in the calculation of drug half-life thus determining
the dosage regimen .
Hepatic & renal clearance are the two main component of plasma clearance.
No model has been reported that is capable of predicting plasma clearance
solely from computed drug structure .
Current modeling effort are mainly focused on estimating in-vivo clearance from
in-vivo data .
Just like other PK aspect the hepatic & renal clearance process is also
complicate by presence of active transporter.
11. ACTIVE TRANSPORTER :
Transporter are an integral part of any ADMET modeling program because of
their presence on barrier membrane & then substantial overlap between their
substrate & many drug.
Unfortunately because of limited understanding of transporters , must prediction
program do not have a mechanism to incorporate the effect of action transport .