How structural biology can influence data science and vice versa. Based on a forthcoming paper in Current Opinions in Structural Biology https://arxiv.org/abs/1807.09247 and presented as part of the University of Virginia Data Science Institute Lunch and Learn Series, August 31, 2018
How structural biology can influence data science and vice versa. Based on a forthcoming paper in Current Opinions in Structural Biology https://arxiv.org/abs/1807.09247 and presented as part of the University of Virginia Data Science Institute Lunch and Learn Series, August 31, 2018
Frontiers of Computing at the Cellular and Molecular ScalesPhilip Bourne
3 basic points when establishing a new biomedical initiative. Presented at Frontiers of Computing in Health and Society, George Mason University, September 21, 2021.
Why the food sector needs a research infrastructure on Food and Health Consum...e-ROSA
Bent Egberg Mikkelsen and Karin Zimmermann's presentation at the eROSA Workshop “Towards Open Science in Agriculture & Food”, a side event to High Level conference on FOOD 2030, Plovdiv, Bulgaria (13/6/2018)
How to own your research communications - The importance of identity and owne...Andy Tattersall
This is a talk I delivered at a joint Cilip Special Interest Group event between ARLG and MmIT at The British Library. The purpose of the talk was to discuss the importance of using unique identifiers when communicating your research and how to own your voice and research when working with the media
A presentation on knowledge sharing, innovation, and open government data presented to the University of Adelaide MBA program during Dr. David Pender's class
SCUP 2016 Mid-Atlantic Symposium: Big Data: Academy Research, Facilities, and Infrastructure Implications and Opportunities. John Hopkins, May 13, 2016
Big Data Analytics and Open Data : The presentation aim is to enhance the awareness about big data analytics by process and importance of open data. Two case studies overview with accuracy and introduction is presented by Sharjeel Imtiaz.
PhD from University of East London
Showcasing the new initiative, MIT Startup Exchange, introducing the workshop What's next in mobile at MIT in January 2015. By Trond Undheim, PhD, Lead, MIT Startup Exchange.
Democratic electoral systems around the world are facing ever greater threats of interference enabled by digital technologies that can be used to mislead voters in powerful ways. UCalgary experts examine how collection of voter data, micro-targeting, artificial intelligence and deepfake technologies are being used to influence election outcomes, as well as possible regulatory solutions for safeguarding Canada’s electoral system in the future. Watch the full webinar recording at https://explore.ucalgary.ca/elections-digital-age
By Sander Janssen, Research Team Leader of Earth Observation and Environmental Informatics at Alterra, Wageningen UR,
12 April 2017- 14:00 CET
--The webinar was held as part of ASIRA (Access to Scientific Information Resources in Agriculture) Online Course for Low-Income Countries--
This presentation focus on the political context of open data publishing, methodological frameworks for estimating the impacts of open data and highlight the Open Data Journal for Agricultural Research as publication channel for open data sets. It will also build on personal reflections on publishing open data from Dr. Janssen’s own research career.
For more on the topic: http://aims.fao.org/activity/blog/join-free-webinar-publishing-open-data-agricultural-research
Frontiers of Computing at the Cellular and Molecular ScalesPhilip Bourne
3 basic points when establishing a new biomedical initiative. Presented at Frontiers of Computing in Health and Society, George Mason University, September 21, 2021.
Why the food sector needs a research infrastructure on Food and Health Consum...e-ROSA
Bent Egberg Mikkelsen and Karin Zimmermann's presentation at the eROSA Workshop “Towards Open Science in Agriculture & Food”, a side event to High Level conference on FOOD 2030, Plovdiv, Bulgaria (13/6/2018)
How to own your research communications - The importance of identity and owne...Andy Tattersall
This is a talk I delivered at a joint Cilip Special Interest Group event between ARLG and MmIT at The British Library. The purpose of the talk was to discuss the importance of using unique identifiers when communicating your research and how to own your voice and research when working with the media
A presentation on knowledge sharing, innovation, and open government data presented to the University of Adelaide MBA program during Dr. David Pender's class
SCUP 2016 Mid-Atlantic Symposium: Big Data: Academy Research, Facilities, and Infrastructure Implications and Opportunities. John Hopkins, May 13, 2016
Big Data Analytics and Open Data : The presentation aim is to enhance the awareness about big data analytics by process and importance of open data. Two case studies overview with accuracy and introduction is presented by Sharjeel Imtiaz.
PhD from University of East London
Showcasing the new initiative, MIT Startup Exchange, introducing the workshop What's next in mobile at MIT in January 2015. By Trond Undheim, PhD, Lead, MIT Startup Exchange.
Democratic electoral systems around the world are facing ever greater threats of interference enabled by digital technologies that can be used to mislead voters in powerful ways. UCalgary experts examine how collection of voter data, micro-targeting, artificial intelligence and deepfake technologies are being used to influence election outcomes, as well as possible regulatory solutions for safeguarding Canada’s electoral system in the future. Watch the full webinar recording at https://explore.ucalgary.ca/elections-digital-age
By Sander Janssen, Research Team Leader of Earth Observation and Environmental Informatics at Alterra, Wageningen UR,
12 April 2017- 14:00 CET
--The webinar was held as part of ASIRA (Access to Scientific Information Resources in Agriculture) Online Course for Low-Income Countries--
This presentation focus on the political context of open data publishing, methodological frameworks for estimating the impacts of open data and highlight the Open Data Journal for Agricultural Research as publication channel for open data sets. It will also build on personal reflections on publishing open data from Dr. Janssen’s own research career.
For more on the topic: http://aims.fao.org/activity/blog/join-free-webinar-publishing-open-data-agricultural-research
Delivering value through data final ppt 2019Future Agenda
Delivering value through data - final report. Throughout 2018, Future Agenda canvassed the views of a wide range of 900 experts with different backgrounds and perspectives from around the world, to provide their insights on the future value of data. Supported by Facebook and many other organisations, we held 30 workshops across 24 countries in Africa, Asia, the Americas, and Europe. In them, we reviewed the data landscape across the globe, as it is now, and how experts think it will evolve over the next five to ten years.
The aim? To gain a better understanding of how perspectives and priorities differ across the world, and to use the diverse voices and viewpoints to help governments, organisations, and individuals to better understand what they need to do to realise data’s full potential.
We are not aware of any other exercise of this scale or scope. No other project we know of has carefully and methodically canvassed the views of such a wide range of experts from such a diverse range of backgrounds and geographical locations. The result, we hope, delivers a more comprehensive picture of the sheer variety of issues and views thrown up by a fast-evolving ‘data economy’ than can be found elsewhere. And, by providing this rich set of perspectives, we aim to help businesses and governments - to develop the policies, strategies, and innovations that realise the full potential of data (personal, social, economic, commercial), while addressing potential harms, both locally and globally.
For more details see the dedicated website www.deliveringvaluethroughdata.org
e-SIDES workshop at ICE-IEEE Conference, Madeira 28/06/2017e-SIDES.eu
On June 28, the e-SIDES team members made a presentation of the project at the ICE/IEEE Conference 2017 in Madeira. The workshop "Societal and Ethical Challenges in the Era of Big Data: Exploring the emerging issues and opportunities of big data management and analytic" welcomed a high-level international academic and government audience, such as professors and researchers, to present the initial analysis of the key challenges.
Aligning stakeholders' perspectives in Open Government Data CommunityAdegboyega Ojo
Open Government Data (OGD) has gained momentum and a large number of portals have become available providing all kind of data. There are many practices available and all kind of technologies enabling the opening of data. Yet the field is fragmented and effective use of open data requires knowledge found in different communities. The goal of the proposed workshop is two-fold. First it aims to contribute to better and shared understanding of concerns across core stakeholder groups in the OGD community. Second, it intends to show and discuss how some emerging technological solutions in the social semantic web and linked data technology domain could effectively address some of these concerns when considered as a part of a socio-technical ensemble.
Data as an Asset – A Top Risk?
The concept of data being accounted for as an 'asset' is increasingly considered to be a top future risk. The fifth of our 2030 digital workshops in collaboration with The Conference Board explored varied potential data risks (Many thanks to Ellen Hexter and Sara Murray for organising).
Rated top by 50 business leaders for future impact, and second for likely change, was a foresight that “organisations will be obliged to account for what data they own or access. As such they will be required to regularly report on their full data portfolio.” (See attached PDF)
Particular concerns were raised on; how organisations will best assign value to their data; how it will be treated as an asset; who will audit this; whether ownership will be transferred with use and how, if valued, data will be taxed.
Some felt that by 2030 there will be guidelines, standards and frameworks in place – other were less convinced. Most however agreed that many business models will change.
To explore this topic more see section 4.6 in the global report on https://www.deliveringvaluethroughdata.org
Add your view via @futureagenda on twitter or via LinkedIn on https://www.linkedin.com/posts/innovationstrategy_future-data-risk-workshop-stimulus-activity-6714470359971700736-MunM
The 4th paradigm of research is manifest in the rising popularity of data science. Data science developments relevant to human genetics are discussed with particular reference to cloud computing and data accessibility.
American Society for Human Genetics, October 16, 2018, San Diego
Bryce Meredig of Citrine Informatics presents the company's materials data platform, Citrination. For academic and government users, this infrastructure is a free and open means to meet data management plan requirements of many federal funding agencies.
Presentation given at Macquarie University in support of the ARDC 'institutional role in the data commons' project on "Implementing FAIR: Standards in Research Data Management" https://ardc.edu.au/news/data-and-services-discovery-activities-successful-applicants/
Presented online as part of the NASM series in Advancing Drug Discovery see https://www.nationalacademies.org/event/40883_09-2023_advancing-drug-discovery-data-science-meets-drug-discovery
For a panel discussion at the Associate Research Libraries Spring meeting April 27, 2022, Montreal https://www.arl.org/schedule-for-spring-2022-association-meeting/
NITRD Big Data Interagency Working Group Workshop: Pioneering the Future of Federally Supported Data Repositories Jan 13, 2021 - Opening comments on where we are and one suggestion of where we might go with an International Data Science Institute (IDSI) - A blue sky view.
ADSA presentation to the Education SIG on May 28, 2020. Describes 6 years of experience with a capstone program as part of the MS in Data Science at the University of Virginia.
Introduction to AI for Nonprofits with Tapp NetworkTechSoup
Dive into the world of AI! Experts Jon Hill and Tareq Monaur will guide you through AI's role in enhancing nonprofit websites and basic marketing strategies, making it easy to understand and apply.
How to Make a Field invisible in Odoo 17Celine George
It is possible to hide or invisible some fields in odoo. Commonly using “invisible” attribute in the field definition to invisible the fields. This slide will show how to make a field invisible in odoo 17.
The Roman Empire A Historical Colossus.pdfkaushalkr1407
The Roman Empire, a vast and enduring power, stands as one of history's most remarkable civilizations, leaving an indelible imprint on the world. It emerged from the Roman Republic, transitioning into an imperial powerhouse under the leadership of Augustus Caesar in 27 BCE. This transformation marked the beginning of an era defined by unprecedented territorial expansion, architectural marvels, and profound cultural influence.
The empire's roots lie in the city of Rome, founded, according to legend, by Romulus in 753 BCE. Over centuries, Rome evolved from a small settlement to a formidable republic, characterized by a complex political system with elected officials and checks on power. However, internal strife, class conflicts, and military ambitions paved the way for the end of the Republic. Julius Caesar’s dictatorship and subsequent assassination in 44 BCE created a power vacuum, leading to a civil war. Octavian, later Augustus, emerged victorious, heralding the Roman Empire’s birth.
Under Augustus, the empire experienced the Pax Romana, a 200-year period of relative peace and stability. Augustus reformed the military, established efficient administrative systems, and initiated grand construction projects. The empire's borders expanded, encompassing territories from Britain to Egypt and from Spain to the Euphrates. Roman legions, renowned for their discipline and engineering prowess, secured and maintained these vast territories, building roads, fortifications, and cities that facilitated control and integration.
The Roman Empire’s society was hierarchical, with a rigid class system. At the top were the patricians, wealthy elites who held significant political power. Below them were the plebeians, free citizens with limited political influence, and the vast numbers of slaves who formed the backbone of the economy. The family unit was central, governed by the paterfamilias, the male head who held absolute authority.
Culturally, the Romans were eclectic, absorbing and adapting elements from the civilizations they encountered, particularly the Greeks. Roman art, literature, and philosophy reflected this synthesis, creating a rich cultural tapestry. Latin, the Roman language, became the lingua franca of the Western world, influencing numerous modern languages.
Roman architecture and engineering achievements were monumental. They perfected the arch, vault, and dome, constructing enduring structures like the Colosseum, Pantheon, and aqueducts. These engineering marvels not only showcased Roman ingenuity but also served practical purposes, from public entertainment to water supply.
Palestine last event orientationfvgnh .pptxRaedMohamed3
An EFL lesson about the current events in Palestine. It is intended to be for intermediate students who wish to increase their listening skills through a short lesson in power point.
Honest Reviews of Tim Han LMA Course Program.pptxtimhan337
Personal development courses are widely available today, with each one promising life-changing outcomes. Tim Han’s Life Mastery Achievers (LMA) Course has drawn a lot of interest. In addition to offering my frank assessment of Success Insider’s LMA Course, this piece examines the course’s effects via a variety of Tim Han LMA course reviews and Success Insider comments.
Operation “Blue Star” is the only event in the history of Independent India where the state went into war with its own people. Even after about 40 years it is not clear if it was culmination of states anger over people of the region, a political game of power or start of dictatorial chapter in the democratic setup.
The people of Punjab felt alienated from main stream due to denial of their just demands during a long democratic struggle since independence. As it happen all over the word, it led to militant struggle with great loss of lives of military, police and civilian personnel. Killing of Indira Gandhi and massacre of innocent Sikhs in Delhi and other India cities was also associated with this movement.
Read| The latest issue of The Challenger is here! We are thrilled to announce that our school paper has qualified for the NATIONAL SCHOOLS PRESS CONFERENCE (NSPC) 2024. Thank you for your unwavering support and trust. Dive into the stories that made us stand out!
The French Revolution, which began in 1789, was a period of radical social and political upheaval in France. It marked the decline of absolute monarchies, the rise of secular and democratic republics, and the eventual rise of Napoleon Bonaparte. This revolutionary period is crucial in understanding the transition from feudalism to modernity in Europe.
For more information, visit-www.vavaclasses.com
Synthetic Fiber Construction in lab .pptxPavel ( NSTU)
Synthetic fiber production is a fascinating and complex field that blends chemistry, engineering, and environmental science. By understanding these aspects, students can gain a comprehensive view of synthetic fiber production, its impact on society and the environment, and the potential for future innovations. Synthetic fibers play a crucial role in modern society, impacting various aspects of daily life, industry, and the environment. ynthetic fibers are integral to modern life, offering a range of benefits from cost-effectiveness and versatility to innovative applications and performance characteristics. While they pose environmental challenges, ongoing research and development aim to create more sustainable and eco-friendly alternatives. Understanding the importance of synthetic fibers helps in appreciating their role in the economy, industry, and daily life, while also emphasizing the need for sustainable practices and innovation.
1. What Does Responsible Data
Science Mean?
Philip E. Bourne PhD, FACMI
Stephenson Chair of Data Science
Director, Data Science Institute
Professor of Biomedical Engineering
peb6a@virginia.edu
https://www.slideshare.net/pebourne
08/09/19 Data Science for the Public Good
@pebourne
Thanks to Claudia Scholz for some slides
2. Context – Our new School of Data Science is intent on practicing
responsible data science as our hallmark
From our draft strategic plan –
The practice of data science
through education, research and
service whereby all aspects of these
endeavors consider the ethical,
legal and policy aspects of all we
do such that the reputation and
integrity of the SDS are never in
question.
08/09/19 Data Science for the Public Good
3. Opportunity – In over 40+ years in academia I have never seen
anything as transformative as what is happening today
08/09/19 Data Science for the Public Good
Data Science Initiatives Nationwide
EffectCause
https://surgery.duke.edu/divisions/trauma-and-critical-care-surgery
The story of the trauma surgeon
5. What is happening now is across all verticals – but
there is a precedent we can learn from …
08/09/19 Data Science for the Public Good
https://avora.com/blog/rise-of-the-data-warehouse/
https://individualizedmedicineblog.mayoclinic.org/2013/04/16/c
elebrating-10th-anniversary-of-human-genome-project/
https://science.sciencemag.org/content/291/5507/1304
6. What is happening now is across all verticals – but
there is a precedent we can learn from …
08/09/19 Data Science for the Public Good
https://avora.com/blog/rise-of-the-data-warehouse/
DNA Sequence Data Since the Human Genome
http://synbio.info/display/synbio/Genetic+data+likely+to+become+the+biggest+big+data+in+2025
7. What can we learn from what has come before….
Lesson 1
Responsible data science means recognizing that
exponential growth of data leads to unexpected
consequences
08/09/19 Data Science for the Public Good
8. 08/09/19 Data Science for the Public Good
https://www.montana.edu/news/17886/public-forum-exploring-the-science-and-ethics-of-gene-editing-
set-for-aug-7
http://theconversation.com/five-things-to-consider-before-ordering-an-online-dna-test-92504
https://www.cnbc.com/2019/05/02/ubiome-what-really-happened-at-health-start-up-raided-by-fbi.html
Accuracy
Do you want to know?
You can do it at home
What is ethical in the research lab is not
when commercialized
9. The 6D’s provides one description of
the consequences..
08/09/19 Data Science for the Public Good
10. Lesson 1
Exponential growth of data leads to unexpected
consequences
Responsible data science anticipates or at least
prepares to deal with such consequences ahead of
time
08/09/19 Data Science for the Public Good
11. Lesson 2 – Its all too easy to forget the negative
consequences when …
08/09/19 Data Science for the Public Good [Courtesy Eric Green, NHGRI]
12. Lesson 3 – Policies and laws lag…
08/09/19 Data Science for the Public Good
http://www.navajo-nsn.gov/News%20Releases/OPVP/2019/may/FOR%20IMMEDIATE%20RELEASE%20-
%20Navajo%20Nation%20signs%20data%20sharing%20agreement%20to%20advance%20uranium%20exposure%20research%20efforts.pdf
13. Lesson 4 – Data sharing is a double edge sword…
08/09/19 Data Science for the Public Good
14. On the plus side data sharing can save lives …
Use case: Diffuse Intrinsic Pontine Gliomas (DIPG)
• Occur 1:100,000
individuals
• Peak incidence 6-8 years
of age
• Median survival 9-12
months
• Surgery is not an option
• Chemotherapy ineffective
and radiotherapy only
transitive
[From Adam Resnick]
08/09/19 Data Science for the Public Good
15. Timeline of genomic studies in DIPG
• 2012 Landmark studies identify
histone mutations as recurrent
driver mutations in DIPG
• The data were not shared for 3
years
• In 2015 in largely the same
datasets, others identify ACVR1
mutations as a secondary, co-
occurring mutation
• ACVR1 is targetable by a drug
• 3 years = 180 lives From Adam Resnick
08/09/19 Data Science for the Public Good
16. NIH Strategic Plan for Data
• Support a Highly Efficient and Effective
Biomedical Research Data
Infrastructure
• Promote Modernization of the Data-
Resources Ecosystem
• Support the Development and
Dissemination of Advanced Data
Management, Analytics, and
Visualization Tools
• Enhance Workforce Development for
Biomedical Data Science
• Enact Appropriate Policies to Promote
Stewardship and Sustainability
08/09/19 Data Science for the Public Good
https://grants.nih.gov/grants/rfi/NIH-Strategic-Plan-for-Data-Science.pdf
17. Lesson 4 – Data sharing is a double edge sword…
08/09/19 Data Science for the Public Good
18. STATE HEALTH SURVEILLANCE: NEWBORN SCREENING CASE STUDY
From Bonnie R and Bernheim R, Public Health Law, Policy and
Ethics, Foundation Press (2015)
Category Variables
Infant Patient ID, Birth date, birth time,
ethnicity, weight in grams, feeding
type, transfusion status, zip code
of mother
Sample Sample ID, collection date,
received date, disposition code for
sample (satisfactory/not
satisfactory)
Submitter Submitter ID, submitter name
Test 36 different tests
Diagnosis Diagnosis, diagnosis date, sample
ID
The final dataset contained more than 1.6 million sample
records and nearly 29,000 diagnosis records
08/09/19 Data Science for the Public Good
19. Zip Code Level Sickle Cell Prevalence
08/09/19 Data Science for the Public Good
20. Given these lessons – there are many others – from
just one vertical what should we be doing as a
School of Data Science to be responsible while
undertaking data science for the public good?
08/09/19 Data Science for the Public Good
21. Guiding Principles …
Be open, transparent & collaborative in all we do
• Make ourselves known - use persistent identifiers e.g., ORCID
• Use preprints to accelerate progress
• Only publish Open Access (OA)
• Recognize openness, transparency & collaboration in hiring
and P&T
• Promote institutional openness – Open Data Lab, wikimedian
in residence
• Support institutional open data governance
08/09/19 Data Science for the Public Good
22. Guiding Principles …
Consider the ethical consequences across the complete data
workflow
08/09/19 Data Science for the Public Good
23. Acquisition
Engineering
Analysis
Communication
Dissemination
Ethics
● Census, surveys
● Data mining, digitization
● Sensors, Internet of Things (IoT)
Ethical Issues:
● Mass surveillance
● Privacy, terms of service
● Data sovereignty
Data Acquisition:
Information → Data
Job titles:
● IoT engineer
● Chief privacy officer
● Survey designer
https://www.wired.com/story/all-of-us-launches/
28. Take home
• The fourth paradigm is upon us and will change society
• Forming a new schools is an opportunity to do it right – we need help!
• Look to fields like genomics that have been doing data science for some
time and consider best (and worst) practices
• Responsible data science involves working by a set of guiding principles
and..
• Considering the consequences of what we do across the complete data
lifecycle
08/09/19 Data Science for the Public Good
Only then will we truly be undertaking
data science for the public good
29. Acknowledgements
08/09/19 Data Science for the Public Good
The BD2K Team at NIH
The 150 folks who have passed through my laboratory
https://docs.google.com/spreadsheets/d/1QZ48UaKcwDl_iFCvBmJsT03FK-bMchdfuIHe9Oxc-rw/edit#gid=0