This document discusses current citation practices and the potential benefits of converting citation data to linked open data. It begins by defining citations and references, then outlines some advantages and disadvantages of traditional citation analysis from the perspective of users and researchers. It introduces the concept of linked data and describes how citation data could be transformed into RDF triples linked to other semantic datasets. This would allow for more complex searches and analysis of citation networks. The document provides an example of how a citation could be represented as linked data and discusses advantages such as improved interoperability and the ability to determine why a work was cited.
Presentation at the Workshop on Open Citations, University of Bologna, Bologna, Italy, September 4, 2018.
I will demonstrate the use of the VOSviewer software (www.vosviewer.com), of which I am one of the developers, for creating bibliometric visualizations of science based on openly available bibliographic data sources. Both the use of Crossref data and the use of data from the OpenCitations Corpus will be demonstrated. In addition, I will show how data from Dimensions can be used. The possibilities and limitations of the currently available open data sources will be discussed, also in comparison with more established data sources such as Web of Science and Scopus. Finally, I will provide my perspective on future developments, focusing especially on the integration of open data sources and visual analysis tools.
This poster provides referencing services to linking bibliographical papers and citations with existing Linked Open Data. It aims to convert current bibliographical data in various digital library databases into semantic bibliographical data to enable research profiling and intelligent knowledge discovery
Presentation slides from a talk by Gareth Knight which discussed the need to consider data sharing activities in academic citizenship, different approaches that may be taken to publish data associated with publications, and the opportunities presented by data journals
Using Dataverse Virtual Archive Technology for Research Data ManagementGary Wilhelm
One of the most important components of research is access to quality data. Digital data archives must work to increase submission rates to insure that quality data exist for future researchers. This is a challenge given that recent studies show that vast amounts of data collected during publicly funded projects are not being archived. Even the best-planned methodology will not succeed when researchers use tainted data or fail to find adequate data. Social science data archivists play a key role in the effort to maintain quality sources of data for social science investigators to repurpose and reuse. The dynamic, circular movement of data between the producers and archives is critical to the future of social science research. Data archives have historically provided for this data interchange using considerable human capital. Dedicated archivists and investigators have worked together to ensure that data were processed and placed into an archive best designed for their preservation, a manual process that has become increasingly expensive and unwieldy due to the volume of data being produced and the advanced metadata required to provide future researchers enough details to reuse the study. Typical methods have the researchers working with the archives to deposit the data long after the project has been complete and the papers published. The manual creation of metadata at this point takes far long than if it were collected earlier in the research life cycle. Recent advances in archival repository software may be the key to streamlining this increasingly inefficient archival process by allowing archivist and researchers the ability to create detailed metadata earlier in the research lifecycle at a point where it will take far less time. Software allows researchers greater personal control over archival ingest processes, bridging the gap between researchers and archives and possibly increasing submission rates of valuable data to archives. Archival technology provides tools that manage automated ingest, data cataloging, advanced search and indexing, and rights and access issues. Archival tools also provide proper citation, creation of persistent identifiers, automatic creation of preservation formats, format migration, and statistical analysis of data. Customized branding and citation management can provide investigators collecting these data with a tool that will ensure that they get the credit they deserve. The Dataverse Network Technology has the potential to aid many research groups at UNC in the data management processes and has the potential for use in many disciplines. This presentation will explain the technology and its applicability for managing research data.
Presentation at the Workshop on Open Citations, University of Bologna, Bologna, Italy, September 4, 2018.
I will demonstrate the use of the VOSviewer software (www.vosviewer.com), of which I am one of the developers, for creating bibliometric visualizations of science based on openly available bibliographic data sources. Both the use of Crossref data and the use of data from the OpenCitations Corpus will be demonstrated. In addition, I will show how data from Dimensions can be used. The possibilities and limitations of the currently available open data sources will be discussed, also in comparison with more established data sources such as Web of Science and Scopus. Finally, I will provide my perspective on future developments, focusing especially on the integration of open data sources and visual analysis tools.
This poster provides referencing services to linking bibliographical papers and citations with existing Linked Open Data. It aims to convert current bibliographical data in various digital library databases into semantic bibliographical data to enable research profiling and intelligent knowledge discovery
Presentation slides from a talk by Gareth Knight which discussed the need to consider data sharing activities in academic citizenship, different approaches that may be taken to publish data associated with publications, and the opportunities presented by data journals
Using Dataverse Virtual Archive Technology for Research Data ManagementGary Wilhelm
One of the most important components of research is access to quality data. Digital data archives must work to increase submission rates to insure that quality data exist for future researchers. This is a challenge given that recent studies show that vast amounts of data collected during publicly funded projects are not being archived. Even the best-planned methodology will not succeed when researchers use tainted data or fail to find adequate data. Social science data archivists play a key role in the effort to maintain quality sources of data for social science investigators to repurpose and reuse. The dynamic, circular movement of data between the producers and archives is critical to the future of social science research. Data archives have historically provided for this data interchange using considerable human capital. Dedicated archivists and investigators have worked together to ensure that data were processed and placed into an archive best designed for their preservation, a manual process that has become increasingly expensive and unwieldy due to the volume of data being produced and the advanced metadata required to provide future researchers enough details to reuse the study. Typical methods have the researchers working with the archives to deposit the data long after the project has been complete and the papers published. The manual creation of metadata at this point takes far long than if it were collected earlier in the research life cycle. Recent advances in archival repository software may be the key to streamlining this increasingly inefficient archival process by allowing archivist and researchers the ability to create detailed metadata earlier in the research lifecycle at a point where it will take far less time. Software allows researchers greater personal control over archival ingest processes, bridging the gap between researchers and archives and possibly increasing submission rates of valuable data to archives. Archival technology provides tools that manage automated ingest, data cataloging, advanced search and indexing, and rights and access issues. Archival tools also provide proper citation, creation of persistent identifiers, automatic creation of preservation formats, format migration, and statistical analysis of data. Customized branding and citation management can provide investigators collecting these data with a tool that will ensure that they get the credit they deserve. The Dataverse Network Technology has the potential to aid many research groups at UNC in the data management processes and has the potential for use in many disciplines. This presentation will explain the technology and its applicability for managing research data.
Profiling systems have achieved notable adoption by research institutions.1 Multi-site search of research profiling systems has substantially evolved since the first deployment of systems such as DIRECT2Experts.2 CTSAsearch is a federated search engine using VIVO-compliant Linked Open Data (LOD) published by members of the NIH-funded Clinical and Translational Science (CTSA) consortium and other interested parties. Sixty-four institutions are currently included, spanning six distinct platforms and three continents (North America, Europe and Australia). In aggregate, CTSAsearch has data on 150-300 thousand unique researchers and their 10 million publications. The public interface is available at http://research.icts.uiowa.edu/polyglot.
It is our presentation during CEIT-2016 (Fourth Edition of the International Conference on Control Engineering and Information Technology) held at Hammamet, Tunisia, December 16-18 2016.
Presentation given at the British Library Turing workshop on Software Citation, considering what lessons could be learned from the world of data citation
Science is rapidly being brought into the electronic realm and electronic laboratory notebooks (ELN) are a big part of this activity. The representation of the scientific process in the context of an ELN is an important component to making the data recorded in ELNs semantically integrated.
This presentation outlined initial developments of an Electronic Notebook Ontology (ENO) that will help tie together the ExptML ontology, HCLS Community Profile data descriptions, and the VIVO-ISF ontology.
We describe current work in federating data from institutional research profiling systems – providing single-point
access to substantial numbers of investigators through concept-driven search, visualization of the relationships
among those investigators and the ability to interlink systems into a single information ecosystem.
NADA is an open source web application for archiving, searching and browsing microdata using the data documentation initiative (DDI).
Key features are:
- Support DDI and RDF
- Search studies and variables
- Compare variables
- Provides data access for datasets using Public, Licensed, Direct and Data Enclave
Presentation on data sharing that outlines five layers that must be addressed to enable data to be located, obtained, access, understood and use, and cited.
Poster presented at Twitter for Research Conference, April 22-24, 2015, Lyon, France.
This study provides the first findings of a bibliometric study which was conducted to describe the scientific literature available on Twitter between 2006-2014. Source: Scopus Database
#Twlyon2015
Dilemmas related to sharing research data were presented. We talked about fraud and misuse and examples of retracted journal articles because of proven fraud. Licences for research data were introduced and requests from journals about open access policies. Researchers need to check and verify journal in which they will published. They should use DOAJ for that. Unfortunately there are more and more hijacked journals. When making data available for secondary use researchers should confirm that distribution is in compliance with ethical norms and legal system.
Event was one of Foster Cessda training events for doctoral students.
Related link: https://www.fosteropenscience.eu/project/index.php?option=com_content&view=category&layout=blog&id=23&Itemid=104
Data publishing from the viewpoint of a biodiversity publisherVince Smith
Lyubomir Penev, Vishwas Chavan, Gregor Hagedorn, Daniel Mietchen, Teodor Georgiev, David Roberts, Vincent Smith. 2011. Data publishing from the viewpoint of a biodiversity publisher. TDWG 2011 Annual Conference, Data Citation Workshop at the Astor Crown Plaza Hotel, New Orleans, Louisiana, USA. 16 - 21st October 2011.
This is an update on the status of federal requirements for data sharing in 2015. These slides were presented at ACRL in Portland in March 2015, by Linda Detterman and Jared Lyle of ICPSR, based at the University of Michigan. The session includes overviews of federal requirements, data curation, data management plans, data sharing services, and lots of fun!
Profiling systems have achieved notable adoption by research institutions.1 Multi-site search of research profiling systems has substantially evolved since the first deployment of systems such as DIRECT2Experts.2 CTSAsearch is a federated search engine using VIVO-compliant Linked Open Data (LOD) published by members of the NIH-funded Clinical and Translational Science (CTSA) consortium and other interested parties. Sixty-four institutions are currently included, spanning six distinct platforms and three continents (North America, Europe and Australia). In aggregate, CTSAsearch has data on 150-300 thousand unique researchers and their 10 million publications. The public interface is available at http://research.icts.uiowa.edu/polyglot.
It is our presentation during CEIT-2016 (Fourth Edition of the International Conference on Control Engineering and Information Technology) held at Hammamet, Tunisia, December 16-18 2016.
Presentation given at the British Library Turing workshop on Software Citation, considering what lessons could be learned from the world of data citation
Science is rapidly being brought into the electronic realm and electronic laboratory notebooks (ELN) are a big part of this activity. The representation of the scientific process in the context of an ELN is an important component to making the data recorded in ELNs semantically integrated.
This presentation outlined initial developments of an Electronic Notebook Ontology (ENO) that will help tie together the ExptML ontology, HCLS Community Profile data descriptions, and the VIVO-ISF ontology.
We describe current work in federating data from institutional research profiling systems – providing single-point
access to substantial numbers of investigators through concept-driven search, visualization of the relationships
among those investigators and the ability to interlink systems into a single information ecosystem.
NADA is an open source web application for archiving, searching and browsing microdata using the data documentation initiative (DDI).
Key features are:
- Support DDI and RDF
- Search studies and variables
- Compare variables
- Provides data access for datasets using Public, Licensed, Direct and Data Enclave
Presentation on data sharing that outlines five layers that must be addressed to enable data to be located, obtained, access, understood and use, and cited.
Poster presented at Twitter for Research Conference, April 22-24, 2015, Lyon, France.
This study provides the first findings of a bibliometric study which was conducted to describe the scientific literature available on Twitter between 2006-2014. Source: Scopus Database
#Twlyon2015
Dilemmas related to sharing research data were presented. We talked about fraud and misuse and examples of retracted journal articles because of proven fraud. Licences for research data were introduced and requests from journals about open access policies. Researchers need to check and verify journal in which they will published. They should use DOAJ for that. Unfortunately there are more and more hijacked journals. When making data available for secondary use researchers should confirm that distribution is in compliance with ethical norms and legal system.
Event was one of Foster Cessda training events for doctoral students.
Related link: https://www.fosteropenscience.eu/project/index.php?option=com_content&view=category&layout=blog&id=23&Itemid=104
Data publishing from the viewpoint of a biodiversity publisherVince Smith
Lyubomir Penev, Vishwas Chavan, Gregor Hagedorn, Daniel Mietchen, Teodor Georgiev, David Roberts, Vincent Smith. 2011. Data publishing from the viewpoint of a biodiversity publisher. TDWG 2011 Annual Conference, Data Citation Workshop at the Astor Crown Plaza Hotel, New Orleans, Louisiana, USA. 16 - 21st October 2011.
This is an update on the status of federal requirements for data sharing in 2015. These slides were presented at ACRL in Portland in March 2015, by Linda Detterman and Jared Lyle of ICPSR, based at the University of Michigan. The session includes overviews of federal requirements, data curation, data management plans, data sharing services, and lots of fun!
en esta sesión podrá encontrar una recopilación simplificada del manejo del Dengue aplicada a casos reales y manejados conforme al protocolo de atención de pacientes con Dengue en niños y adultos.encontrara las herramientas necesarias para manejar los pacientes en las diferentes etapas de presentación clínica del Dengue según la clasificación en Nicaragua. Espero sea de su agrado.
Webinar Cloud: Servicios de Seguridad GestionadaArsys
Presentación del Webinar sobre Servicios de Seguridad Gestionada, impartido por Álvaro Collado, Técnico de Preventa de Cloud Solutions en Arsys, en octubre de 2013.
Más información sobre los Webinars Cloud en http://ow.ly/pBkQd
Адаптація студентів до ринку праці м. Запоріжжя (погляд роботодавців)ngosmartzp
Дослідження було проведено Агенцією MLS GROUP у партнерстві з Центром незалежних соціологічних досліджень ЗНУ на замовлення ГРОМАДСЬКОЇ ОРГАНІЗАЦІЇ «СМАРТ» за підтримки Сумського обласного комітету молодіжних організацій (СОКМО), за фінансової підтримки NED.
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Poster RDAP13: Research Data in eCommons @ Cornell: Present and FutureASIS&T
Wendy A. Kozlowski, Dianne Dietrich, Gail Steinhart and Sarah Wright
Cornell University Library, Ithaca, NY
Research Data in eCommons @ Cornell: Present and Future
Research Data Access & Preservation Summit 2013
Baltimore, MD April 4, 2013 #rdap13
The role of persistent identifiers in open researchJisc
The role that PIDs can and should play in helping us to understand research.
Professor James Wilsdon, director, Research on Research Institute (RoRI) and digital science professor of research policy, University of Sheffield.
A presentation at Jisc's persistent identifiers and open access in the UK: the way forward online event on 25 June 2020.
INSERM Workshop 246 - Management and reuse of health data: methodological issues: https://ateliersinserm.dakini.fr/en/workshop.246.management.and.reuse.of.health.data.methodological.issues-66-22.php
VIVO: enabling the discovery of research and scholarshipPaul Albert
An introduction to VIVO, an open source, semantic web application that enables discovery of research and scholarship across institutions and one library's role in its implementation and development.
Talk at JISC Repositories conference intended for repository managers or research managers on some of the issues involved. Talk had to be originally given unaided because of a technology problem!
Integration of research literature and data (InFoLiS)Philipp Zumstein
Talk at CNI 2015 Spring Membership Meeting in Seattle on April 14th, 2015, see http://www.cni.org/events/membership-meetings/upcoming-meeting/spring-2015/
Abstract: The goal of the InFoLiS project is to connect research data and publications. Links between data and literature are created automatically by means of text mining and made available as Linked Open Data (LOD) for seamless integration into different retrieval systems. This enables scientists to directly access information about corresponding research data in a literature information system, and, vice versa, it is possible to directly find different interpretations and analyses in the literature of the same research data. In our talk, we will describe our methods for generating the links and give insight into the Linked Data infrastructure including the services we are currently building. Most importantly, we will detail how our solutions can be used by other institutions and invite all interested participants to discuss with us their ideas and thoughts on the requirements for these services to ensure broad interoperability with existing systems and infrastructures. InFoLiS is a joint project by the GESIS – Leibniz Institute for the Social Sciences, Cologne, Mannheim University Library, and Mannheim University supported by a grant from the DFG – German Research Foundation.
Interpreting the Semantics of Anomalies Based on Mutual Information in Link M...ijdms
This paper aims to show how mutual information can help provide a semantic interpretation of anomalies in data, characterize the anomalies, and how mutual information can help measure the information that object item X shares with another object item Y. Whilst most link mining approaches focus on predicting link type, link based object classification or object identification, this research focused on using link mining to detect anomalies and discovering links/objects among anomalies. This paper attempts to demonstrate the contribution of mutual information to interpret anomalies using a case study.
Scholarly Communication for Bioinformatics StudentsPhilip Bourne
Presentation made to the incoming bioinformatics and systems biology students at UCSD on how they could get involved in changing scholarly communication. Given February 28, 2011
Slides to accompany Dr Louise Cooke's workshop session "An introduction to social network analysis" presented at DREaM Event 2.
For more information about the event, please visit http://lisresearch.org/dream-project/dream-event-2-workshop-tuesday-25-october-2011/
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Short current citations and a future with linked data
1. Current Citations and a
Future with Linked Data
Christina Fotiou | Erifili Kokkalidou
fotiouxristina@gmail.com | eri.kokkalidou@gmail.com
Alexander Technological Educational Institute of Thessaloniki
Department of Library Science and Information Systems
Alternative Metrics or Tailored Metrics Workshop
9-10 November 2016
Warsaw, Poland
2. Acknowledgements
First of all, we would like to thank Dr Andrea Scharnhorst and the COST Action for
making it possible for us to be here today. We would also like to express our
gratitude to our professor, Dr Panayota Polydoratou for helping us during our
research and providing essential feedback.
1
Alternative Metrics or Tailored Metrics
3. Citations and References
Citation analysis is defined as the evolution and interpretation of the citations
received by articles scientist universities, countries and other aggregates of
scientific activity, used as a measure of scientific influence and productivity
(Insights, 2013)
References are the views that come from external sources. These references
safeguard the copyright of the author guaranteeing the law and show respect
for the unwritten laws of scientific ethics (Insights, 2013)
2
Alternative Metrics or Tailored Metrics
4. Advantages of Citations
USER
Abundance of scientific information on the Web
Incorporate information into larger databases
Authenticity and quality of a researcher’s work in the context of previous
works
RESEARCHER
It is possible to make something, for example a paper or an author, known
Reuse of existing knowledge to implement and improve a new research topic
Articles are upgraded in quality, based on how often they are updated with
the latest information
3
Alternative Metrics or Tailored Metrics
5. Disadvantages of Citations
USER
It is not clear why the author cited a particular resource
The author cites his/her previous work
RESEARCHER
Same author’s full name, but different scientific field
Citing an expert on the field, without having read his/her work
Citation of electronic resources is favored
4
Alternative Metrics or Tailored Metrics
6. What are Linked Data?
Current Web: Linking between documents (hyperlinks)
Semantic Web: Linking between data contained in the documents (Linked Data)
“Linked Data refers to data published on the Web in such a way that it is machine-
readable, its meaning is explicitly defined, it is linked to other external data sets,
and can in turn be linked to from external data sets.” (Bizer, Heath, and Berners-Lee
2009)
5
Alternative Metrics or Tailored Metrics
URI • Everything is given a URI as a name
HTTP • The URIs are dereferenced over the HTTP protocol
RDF
• RDF describes things through triples
with the form of Subject-Predicate-
Object
Advantages
Interoperability
Applications that use data from
multiple sources
7. CiTO Ontology
Citation Typing Ontology
Helps with the publication of citation data as Linked Data
Specifies why a particular paper was used
Calculates citation frequency
Other CiTO features
o Peer review status
o Publication status
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Alternative Metrics or Tailored Metrics
8. Citation data to Linked data
7
Citation data to
Linked Data
• URIs
• RDF triples
• CiTO
Link to other
semantic data
• Citation data
• Bibliographic
data
• Other data
Visualization and
query
• Citation
networks
• Advanced
searches
Alternative Metrics or Tailored Metrics
9. Example
The paper “CiTO, the Citation Typing Ontology” cites the paper “Adventures in
Semantic Publishing: Exemplar Semantic Enhancements of a Research Article”.
In RDF Linked Data:
<http://dx.doi.org/10.1186/2041-1480-1-S1-S6>
cito:cites <http://dx.doi.org/10.1371/journal.pcbi.1000361>.
8
Alternative Metrics or Tailored Metrics
10. Advantages of turning citation data to
Linked Data
Citation data can be used by other applications
It is possible to describe the reason a publication was cited
Linked data weave a net of connections between citation information
(authors, papers, journals, etc)
Connection of citation data to existing Linked Open Data
Ability to perform more complex searches
Provide advanced metrics
Visualization of citation networks
9
Alternative Metrics or Tailored Metrics
12. References
o Bizer, C., Heath, T., & Berners-Lee, T. (2009). Linked Data - The Story So Far: International Journal on Semantic Web and Information Systems,
5(3), 1–22. https://doi.org/10.4018/jswis.2009081901
o Ζαπουνίδου, Σ. (2015). Συνδεδεμένα δεδομένα βιβλιοθηκών ή Σχεδιάζοντας τη δολοφονία του MARC. Θεσσαλονίκη.
o Shotton, D. (2010). CiTO, the Citation Typing Ontology. Journal of Biomedical Semantics, 1(1), S6. https://doi.org/10.1186/2041-1480-1-S1-S6
o Ding, Y., Konidena, D., Sun, Y., Chen, S., & Yan, E. (n.d.). Semantic Citation. Retrieved from
https://pdfs.semanticscholar.org/fbfa/00a88b98c108ed99c7114231258d901395c9.pdf
o WikiCite: Citations for the sum of all human knowledge - YouTube. (n.d.). Retrieved October 25, 2016, from
https://www.youtube.com/watch?v=9xF42-Cqpuw
o OpenCitations - Home. (n.d.). Retrieved November 1, 2016, from http://opencitations.net/
o Insights, E. (2013). Using citation analysis to measure research impact. Editage Insights(04-11-2013). Retrieved from
http://www.editage.com/insights/using-citation-analysis-to-measure-research-impact
o Standardizing research metrics and indicators – Perspectives & approaches - Research Trends. (n.d.). Retrieved from
https://www.researchtrends.com/issue-39-december-2014/standardizing-research-metrics-and-indicators/
o Hicks, D., Wouters, P., Waltman, L., de Rijcke, S., & Rafols, I. (2015). Bibliometrics: The Leiden Manifesto for research metrics. Nature News,
520(7548), 429. https://doi.org/10.1038/520429a
o Counting Citations. (n.d.). Retrieved 30 October 2016, from https://www.lib.utexas.edu/chem/info/cited.html
o Kovatcheva, P. (n.d.). LibGuides. Science - Postgraduates & Research Support. Bibliometrics and Citations Analysis. Retrieved 30 October 2016,
from http://uj.ac.za.libguides.com/content.php?pid=670102&sid=5702874
o Meho, L. I. (2007). The rise and rise of citation analysis [Preprint]. Retrieved 30 October 2016 2016, from http://eprints.rclis.org/8738/
11
Alternative Metrics or Tailored Metrics