One Funder’s View for Advancing Open SciencePhilip Bourne
Robert Wood Johnson Foundation & SPARC Workshop on October 19, 2015 intended to catalyze a dialogue about opportunities for philanthropy and other funders in open access.
Understanding users’ latent intents behind search queries is essential for satisfying a user’s search needs. Search intent mining can help search engines to enhance its ranking of search results, enabling new search features like instant answers, personalization, search result diversification, and the recommendation of more relevant ads. Consequently, there has been increasing attention on studying how to effectively mine search intents by analyzing search engine query logs. While state-of-the-art techniques can identify the domain of the queries (e.g. sports, movies, health), identifying domain-specific intent is still an open problem. Among all the topics available on the Internet, health is one of the most important in terms of impact on the user and it is one of the most frequently searched areas. This dissertation presents a knowledge-driven approach for domain-specific search intent mining with a focus on health-related search queries.
First, we identified 14 consumer-oriented health search intent classes based on inputs from focus group studies and based on analyses of popular health websites, literature surveys, and an empirical study of search queries. We defined the problem of classifying millions of health search queries into zero or more intent classes as a multi-label classification problem. Popular machine learning approaches for multi-label classification tasks (namely, problem transformation and algorithm adaptation methods) were not feasible due to the limitation of label data creations and health domain constraints. Another challenge in solving the search intent identification problem was mapping terms used by laymen to medical terms. To address these challenges, we developed a semantics-driven, rule-based search intent mining approach leveraging rich background knowledge encoded in Unified Medical Language System (UMLS) and a crowd sourced encyclopedia (Wikipedia). The approach can identify search intent in a disease-agnostic manner and has been evaluated on three major diseases.
While users often turn to search engines to learn about health conditions, a surprising amount of health information is also shared and consumed via social media, such as public social platforms like Twitter. Although Twitter is an excellent information source, the identification of informative tweets from the deluge of tweets is the major challenge. We used a hybrid approach consisting of supervised machine learning, rule-based classifiers, and biomedical domain knowledge to facilitate the retrieval of relevant and reliable health information shared on Twitter in real time. Furthermore, we extended our search intent mining algorithm to classify health-related tweets into health categories. Finally, we performed a large-scale study to compare health search intents and features that contribute in the expression of search intent from 100+ million search queries from smarts devices (smartphones/tablets) and personal computers (desktops/laptops)
From Research to Practice - New Models for Data-sharing and Collaboration to ...Health Data Consortium
Watch the webinar here: http://encore.meetingbridge.com/MB005418/140528/
Webinar transcript: http://hdc.membershipsoftware.org/Files/webinars/HDC-PwC%20NIH%20&%20PCORI%20Webinar%20Transcript%205_28_14.pdf
Patient-Centered Outcomes Research Institute (PCORI) Executive Director Joe Selby, MD, MPH; National Institutes of Health (NIH) Director and PCORI Board of Governors member Francis Collins, MD, PhD; and NIH Associate Director for Data Science Philip Bourne, PhD discussed new and emerging trends in big data for health, including:
- How researchers, patients, clinicians, and others are forging new models for data-sharing.
- Leveraging the quantity, variety, and analytic potential of health-related data for research and practice.
- Addressing patients’ perspectives, needs, and concerns in creating new opportunities for innovation and translational science.
- Exciting initiatives such as PCORnet, the National Patient-Centered Clinical Research Network initiative that PCORI is now helping to develop, and related open data and technology efforts such - as the NIH Health Systems Collaboratory and Big Data to Knowledge (BD2K) initiative.
Discover more health data resources on our website at http://www.healthdataconsortium.org/
One Funder’s View for Advancing Open SciencePhilip Bourne
Robert Wood Johnson Foundation & SPARC Workshop on October 19, 2015 intended to catalyze a dialogue about opportunities for philanthropy and other funders in open access.
Understanding users’ latent intents behind search queries is essential for satisfying a user’s search needs. Search intent mining can help search engines to enhance its ranking of search results, enabling new search features like instant answers, personalization, search result diversification, and the recommendation of more relevant ads. Consequently, there has been increasing attention on studying how to effectively mine search intents by analyzing search engine query logs. While state-of-the-art techniques can identify the domain of the queries (e.g. sports, movies, health), identifying domain-specific intent is still an open problem. Among all the topics available on the Internet, health is one of the most important in terms of impact on the user and it is one of the most frequently searched areas. This dissertation presents a knowledge-driven approach for domain-specific search intent mining with a focus on health-related search queries.
First, we identified 14 consumer-oriented health search intent classes based on inputs from focus group studies and based on analyses of popular health websites, literature surveys, and an empirical study of search queries. We defined the problem of classifying millions of health search queries into zero or more intent classes as a multi-label classification problem. Popular machine learning approaches for multi-label classification tasks (namely, problem transformation and algorithm adaptation methods) were not feasible due to the limitation of label data creations and health domain constraints. Another challenge in solving the search intent identification problem was mapping terms used by laymen to medical terms. To address these challenges, we developed a semantics-driven, rule-based search intent mining approach leveraging rich background knowledge encoded in Unified Medical Language System (UMLS) and a crowd sourced encyclopedia (Wikipedia). The approach can identify search intent in a disease-agnostic manner and has been evaluated on three major diseases.
While users often turn to search engines to learn about health conditions, a surprising amount of health information is also shared and consumed via social media, such as public social platforms like Twitter. Although Twitter is an excellent information source, the identification of informative tweets from the deluge of tweets is the major challenge. We used a hybrid approach consisting of supervised machine learning, rule-based classifiers, and biomedical domain knowledge to facilitate the retrieval of relevant and reliable health information shared on Twitter in real time. Furthermore, we extended our search intent mining algorithm to classify health-related tweets into health categories. Finally, we performed a large-scale study to compare health search intents and features that contribute in the expression of search intent from 100+ million search queries from smarts devices (smartphones/tablets) and personal computers (desktops/laptops)
From Research to Practice - New Models for Data-sharing and Collaboration to ...Health Data Consortium
Watch the webinar here: http://encore.meetingbridge.com/MB005418/140528/
Webinar transcript: http://hdc.membershipsoftware.org/Files/webinars/HDC-PwC%20NIH%20&%20PCORI%20Webinar%20Transcript%205_28_14.pdf
Patient-Centered Outcomes Research Institute (PCORI) Executive Director Joe Selby, MD, MPH; National Institutes of Health (NIH) Director and PCORI Board of Governors member Francis Collins, MD, PhD; and NIH Associate Director for Data Science Philip Bourne, PhD discussed new and emerging trends in big data for health, including:
- How researchers, patients, clinicians, and others are forging new models for data-sharing.
- Leveraging the quantity, variety, and analytic potential of health-related data for research and practice.
- Addressing patients’ perspectives, needs, and concerns in creating new opportunities for innovation and translational science.
- Exciting initiatives such as PCORnet, the National Patient-Centered Clinical Research Network initiative that PCORI is now helping to develop, and related open data and technology efforts such - as the NIH Health Systems Collaboratory and Big Data to Knowledge (BD2K) initiative.
Discover more health data resources on our website at http://www.healthdataconsortium.org/
Presentation of Hexoskin Validation for KHealth's Dementia Project
The paper is available at: http://www.knoesis.org/library/resource.php?id=2155
Citation for the paper: T. Banerjee, P. Anantharam, W. L. Romine, L. Lawhorne, A. Sheth, 'Evaluating a Potential Commercial Tool for Healthcare Application for People with Dementia' in Proc. of the Intl Conf on Health Informatics and Medical Systems (HIMS), Las Vegas, July 27-30, 2015.
kHealth Bariatrics is an effort to bout against weight recidivism post bariatric surgery. The computer scientists working at Kno.e.sis, an Ohio Center of Excellence in BioHealth Innovation, are collaborating with a bariatric surgeon and a behavioural specialist to bolster weight loss surgery patients for appropriate postsurgical progress.
Should radiologists use messaging services like WhatsApp for professional purposes? Is this compliant with GDPR and HIPAA? What solutions are available?
Improving health care outcomes with responsible data scienceWessel Kraaij
Keynote presentation by Wessel Kraaij at the Dutch pattern recognition and impage processing society (NVPBV) 29/5/2018, Eindhoven.
This talk discusses
1. trends in health care and respondible data science and their intersection
2. Secure federated analytics on distributed data repositories
3. Generating clinically relevant hypotheses from patient forum discussions.
American College of Radiology, Data Science Institute, AI-Lab
The ACR Data Science Institute has developed the ACR AI-LAB™, a data science toolkit designed to democratize AI by empowering radiologists to develop algorithms at their own institutions, using their own patient data, to meet their own clinical needs.
Leveraging Web 2.0 technologies for adolescent and young adult healthcare: A ...YTH
Over 80% of young Americans use social media, and 2 out of 3 report using it at least once a day. By its nature of open sharing, collaboration and exchange of user-generated content, social media and other Web 2.0 technologies have the potential to exert a significant influence on our health through the creation and maintenance of social networks which affect the spread of health behaviors. We sought to conduct a systematic review of the literature for health-related research using social media that involve adolescents and young adults, with the goal of providing guidance on future research in the field and applications of findings to clinical practice for health care providers and organizations.
Wide adoption of smartphones and availability of low-cost sensors has resulted in seamless and continuous monitoring of physiology, environment, and public health notifications. However, personalized digital health and patient empowerment can become a reality only if the complex multisensory and multimodal data is processed within the patient context. Contextual processing of patient data along with personalized medical knowledge can lead to actionable information for better and timely decisions. We present a system called kHealth capable of aggregating multisensory and multimodal data from sensors (passive sensing) and answers to questionnaire (active sensing) from patients with asthma. We present our preliminary data analysis comprising data collected from real patients highlighting the challenges in deploying such an application. The results show strong promise to derive actionable information using a combination of physiological indicators from active and passive sensors that can help doctors determine more precisely the cause, severity, and control level of asthma. Information synthesized from kHealth can be used to alert patients and caregivers for seeking timely clinical assistance to better manage asthma and improve their quality of life.
Paper: http://www.knoesis.org/library/resource.php?id=2153
Citation:
Pramod Anantharam, Tanvi Banerjee, Amit Sheth, Krishnaprasad Thirunarayan, Surendra Marupudi, Vaikunth Sridharan, Shalini G. Forbis, Knowledge-driven Personalized Contextual mHealth Service for Asthma Management in Children , IEEE 4th International Conference on Mobile Services, June 27 - July 2, 2015, New York, USA.
A poster on strategies and uses of Twitter for cancer communication presented at the 2016 Annual Meeting of the Medical Library Association. Second place award for Research Poster at the conference.
Abstract: http://j.mp/1MhWWei
Healthcare applications now have the ability to exploit big data in all its complexity. A crucial challenge is to achieve interoperability or integration so that a variety of content from diverse physical (IoT)- cyber (web-based)- and social sources, with diverse formats and modality (text, image, video), can be used in analysis, insight, and decision-making. At Kno.e.sis, an Ohio Center of Excellence in BioHealth Innovation, we have a variety of large, collaborative healthcare/clinical/biomedical projects, all involving domain experts and end-users, and access to real world data that include: clinical/EMR data (of individual patients and that related to public health), data from a variety of sensors (IoT) on and around patients measuring real-time physiological and environmental observations), social data (Twitter, Web forums, PatientsLikeMe), Web search logs, etc. Key projects include: Prescription drug abuse online-surveillance and epidemiology (PREDOSE), Social media analysis to monitor cannabis and synthetic cannabinoid use (eDrugTrends), Modeling Social Behavior for Healthcare Utilization in Depression, Medical Information Decision Assistant and Support (MIDAS) with application to musculoskeletal issues, kHealth: A Semantic Approach to Proactive, Personalized Asthma Management Using Multimodal Sensing (also for Dementia), and Cardiology Semantic Analysis System (with applications to Computer Assisted Coding and Computerized Document Improvement).
This talk will review how ontologies or knowledge graphs play a central role in supporting semantic filtering, interoperability and integration (including the issues such as disambiguation), reasoning and decision-making in all our health-centric research and applications. Additional relevant information is at the speaker’s HCLS page. http://knoesis.org/amit/hcls
Is the increasing availability of automated image analysis a possibility to strengthen the application of diffusion-MRI as a biometric parameter, and to enhance the future of image biobanks? Or is this evolution threatening the position of radiologists as medical doctors. Is a redefinition of radiologist as computer technicians inevitable?
Josephine Briggs, MD
Director
National Center for Complementary and Alternative Medicine
National Institutes of Health
Opening Keynote "Research in an IT Connected World: Building Better Partnerships – NIH and Health Care Systems"
The era of ‘Big Data’ has arrived for biomedical research, bringing with it immense challenges as well as spectacular opportunities. NIH is establishing major programs with the potential to transform the future of US biomedical research by building the capacities necessary for these challenges. These programs will strengthen research partnerships with health care systems and the IT networks that support them.
The Big Data to Knowledge (BD2K) initiative, to be launched in 2014, will implement a set of recommendations from the Data and Informatics Working Group to the Advisory Committee to the Director. Investments are planned to meet scientific needs to manage and utilize large complex datasets, including strengthening training, and investing in improved analysis methods and software development and dissemination. NIH is also evaluating strengthening data and software sharing policies, and the potential creation of catalogs of research data, and data/metadata standards.
The Common Fund’s Health Care Systems (HCS) Research Collaboratory program has the goal to strengthen the national capacity to implement cost-effective large-scale research studies by engaging major health care delivery organizations as research partners. The aim of the program is to provide a framework of implementation methods and best practices that will enable the participation of many health care systems in clinical research. Research conducted in partnership with health care systems is essential to strengthen the relevance of research results to health practice. Seven demonstration projects, currently in a feasibility phase, are developing detailed methods to implement rigorous randomized studies of questions of major public health impact. These studies, and the IT infrastructure that will make them possible, will be described in detail.
SAMSI Precision Medicine Keynote, August 2018: Data: where Precision Oncology...Warren Kibbe
The promise of precision medicine in oncology is predicated on the availability of accurate, high quality data from the clinic and the laboratory. Likewise, a Learning Health System is one in which we use data to monitor that we are following guidelines and care pathways to deliver the best care and not revert to prior practices (regression testing for care!) and also provide real world evidence to determine effectiveness and identify populations that would benefit from novel therapies. Into this mix of clinical drivers are the rapidly changing capabilities in instrumentation, computing, computation, and the pervasive use of sensors and smart devices. I will highlight a few of the obvious and perhaps not as obvious opportunities in leveraging the increasingly digital landscape in healthcare and biomedical research as we move toward a national learning health system for cancer.
Presentation of Hexoskin Validation for KHealth's Dementia Project
The paper is available at: http://www.knoesis.org/library/resource.php?id=2155
Citation for the paper: T. Banerjee, P. Anantharam, W. L. Romine, L. Lawhorne, A. Sheth, 'Evaluating a Potential Commercial Tool for Healthcare Application for People with Dementia' in Proc. of the Intl Conf on Health Informatics and Medical Systems (HIMS), Las Vegas, July 27-30, 2015.
kHealth Bariatrics is an effort to bout against weight recidivism post bariatric surgery. The computer scientists working at Kno.e.sis, an Ohio Center of Excellence in BioHealth Innovation, are collaborating with a bariatric surgeon and a behavioural specialist to bolster weight loss surgery patients for appropriate postsurgical progress.
Should radiologists use messaging services like WhatsApp for professional purposes? Is this compliant with GDPR and HIPAA? What solutions are available?
Improving health care outcomes with responsible data scienceWessel Kraaij
Keynote presentation by Wessel Kraaij at the Dutch pattern recognition and impage processing society (NVPBV) 29/5/2018, Eindhoven.
This talk discusses
1. trends in health care and respondible data science and their intersection
2. Secure federated analytics on distributed data repositories
3. Generating clinically relevant hypotheses from patient forum discussions.
American College of Radiology, Data Science Institute, AI-Lab
The ACR Data Science Institute has developed the ACR AI-LAB™, a data science toolkit designed to democratize AI by empowering radiologists to develop algorithms at their own institutions, using their own patient data, to meet their own clinical needs.
Leveraging Web 2.0 technologies for adolescent and young adult healthcare: A ...YTH
Over 80% of young Americans use social media, and 2 out of 3 report using it at least once a day. By its nature of open sharing, collaboration and exchange of user-generated content, social media and other Web 2.0 technologies have the potential to exert a significant influence on our health through the creation and maintenance of social networks which affect the spread of health behaviors. We sought to conduct a systematic review of the literature for health-related research using social media that involve adolescents and young adults, with the goal of providing guidance on future research in the field and applications of findings to clinical practice for health care providers and organizations.
Wide adoption of smartphones and availability of low-cost sensors has resulted in seamless and continuous monitoring of physiology, environment, and public health notifications. However, personalized digital health and patient empowerment can become a reality only if the complex multisensory and multimodal data is processed within the patient context. Contextual processing of patient data along with personalized medical knowledge can lead to actionable information for better and timely decisions. We present a system called kHealth capable of aggregating multisensory and multimodal data from sensors (passive sensing) and answers to questionnaire (active sensing) from patients with asthma. We present our preliminary data analysis comprising data collected from real patients highlighting the challenges in deploying such an application. The results show strong promise to derive actionable information using a combination of physiological indicators from active and passive sensors that can help doctors determine more precisely the cause, severity, and control level of asthma. Information synthesized from kHealth can be used to alert patients and caregivers for seeking timely clinical assistance to better manage asthma and improve their quality of life.
Paper: http://www.knoesis.org/library/resource.php?id=2153
Citation:
Pramod Anantharam, Tanvi Banerjee, Amit Sheth, Krishnaprasad Thirunarayan, Surendra Marupudi, Vaikunth Sridharan, Shalini G. Forbis, Knowledge-driven Personalized Contextual mHealth Service for Asthma Management in Children , IEEE 4th International Conference on Mobile Services, June 27 - July 2, 2015, New York, USA.
A poster on strategies and uses of Twitter for cancer communication presented at the 2016 Annual Meeting of the Medical Library Association. Second place award for Research Poster at the conference.
Abstract: http://j.mp/1MhWWei
Healthcare applications now have the ability to exploit big data in all its complexity. A crucial challenge is to achieve interoperability or integration so that a variety of content from diverse physical (IoT)- cyber (web-based)- and social sources, with diverse formats and modality (text, image, video), can be used in analysis, insight, and decision-making. At Kno.e.sis, an Ohio Center of Excellence in BioHealth Innovation, we have a variety of large, collaborative healthcare/clinical/biomedical projects, all involving domain experts and end-users, and access to real world data that include: clinical/EMR data (of individual patients and that related to public health), data from a variety of sensors (IoT) on and around patients measuring real-time physiological and environmental observations), social data (Twitter, Web forums, PatientsLikeMe), Web search logs, etc. Key projects include: Prescription drug abuse online-surveillance and epidemiology (PREDOSE), Social media analysis to monitor cannabis and synthetic cannabinoid use (eDrugTrends), Modeling Social Behavior for Healthcare Utilization in Depression, Medical Information Decision Assistant and Support (MIDAS) with application to musculoskeletal issues, kHealth: A Semantic Approach to Proactive, Personalized Asthma Management Using Multimodal Sensing (also for Dementia), and Cardiology Semantic Analysis System (with applications to Computer Assisted Coding and Computerized Document Improvement).
This talk will review how ontologies or knowledge graphs play a central role in supporting semantic filtering, interoperability and integration (including the issues such as disambiguation), reasoning and decision-making in all our health-centric research and applications. Additional relevant information is at the speaker’s HCLS page. http://knoesis.org/amit/hcls
Is the increasing availability of automated image analysis a possibility to strengthen the application of diffusion-MRI as a biometric parameter, and to enhance the future of image biobanks? Or is this evolution threatening the position of radiologists as medical doctors. Is a redefinition of radiologist as computer technicians inevitable?
Josephine Briggs, MD
Director
National Center for Complementary and Alternative Medicine
National Institutes of Health
Opening Keynote "Research in an IT Connected World: Building Better Partnerships – NIH and Health Care Systems"
The era of ‘Big Data’ has arrived for biomedical research, bringing with it immense challenges as well as spectacular opportunities. NIH is establishing major programs with the potential to transform the future of US biomedical research by building the capacities necessary for these challenges. These programs will strengthen research partnerships with health care systems and the IT networks that support them.
The Big Data to Knowledge (BD2K) initiative, to be launched in 2014, will implement a set of recommendations from the Data and Informatics Working Group to the Advisory Committee to the Director. Investments are planned to meet scientific needs to manage and utilize large complex datasets, including strengthening training, and investing in improved analysis methods and software development and dissemination. NIH is also evaluating strengthening data and software sharing policies, and the potential creation of catalogs of research data, and data/metadata standards.
The Common Fund’s Health Care Systems (HCS) Research Collaboratory program has the goal to strengthen the national capacity to implement cost-effective large-scale research studies by engaging major health care delivery organizations as research partners. The aim of the program is to provide a framework of implementation methods and best practices that will enable the participation of many health care systems in clinical research. Research conducted in partnership with health care systems is essential to strengthen the relevance of research results to health practice. Seven demonstration projects, currently in a feasibility phase, are developing detailed methods to implement rigorous randomized studies of questions of major public health impact. These studies, and the IT infrastructure that will make them possible, will be described in detail.
SAMSI Precision Medicine Keynote, August 2018: Data: where Precision Oncology...Warren Kibbe
The promise of precision medicine in oncology is predicated on the availability of accurate, high quality data from the clinic and the laboratory. Likewise, a Learning Health System is one in which we use data to monitor that we are following guidelines and care pathways to deliver the best care and not revert to prior practices (regression testing for care!) and also provide real world evidence to determine effectiveness and identify populations that would benefit from novel therapies. Into this mix of clinical drivers are the rapidly changing capabilities in instrumentation, computing, computation, and the pervasive use of sensors and smart devices. I will highlight a few of the obvious and perhaps not as obvious opportunities in leveraging the increasingly digital landscape in healthcare and biomedical research as we move toward a national learning health system for cancer.
ODF III - 3.15.16 - Day Two Morning SessionsMichael Kerr
Slide presentations delivered during morning sessions of Day Two of the California Statewide Health and Human Services Open DataFest - March 14 - 15, 2016, Sacramento, CA
Sdal air health and social development (jan. 27, 2014) finalkimlyman
The American Institutes for Research (AIR) and Virginia Tech are collaborating to explore and develop new approaches to combining, manipulating and understanding big data. The two are also looking at how big data analytics can help answer questions critical to solving issues in education, workforce, health, and human and social development. They held two workshops on January 7 and 27, 2014- the first on Education and Workforce Analytics and the second on Health and Social Development Analytics.
Why should we care about integrating data? What should we be trying to achieve? Population Health. The Softer, Human Side of Being “Data Driven” not “Driven By Data." The New Era of Decision Support in Healthcare. Top 10 Challenges To Integrating External Data.
Precision and Participatory Medicine - Medinfo 2015 Panel on big data. Includes the proposal to use the term Expotype to characterise the Exposome of an individual. Electronic expo typing would refer to the automatic construction of individual expo types from electronic clinical records and other sources of environmental risk factor and exposure data.
Big data is more than just a buzzword in healthcare. It's the promise of being able to extract, cull, and interpret medical data to directly benefit population and individual health. learn more about the benefits of big data, roadblocks to leveraging it's potential, how Meaningful Use enablesbig data, what types of cross-country collaboration projects are advancing the use of big data on an international scale, big data's impact on patient privacy and much more! Special thanks to Mandi Bishop for her time on the podcast.
Wake up Pharma and look into your Big data Yigal Aviv
The vast volumes of medical data collected offers pharma the opportunity to harness the information in big data sets
Unlocking the potential in these data sources can ultimately lead to improved patients outcomes
This presentation describes consideration how to maximize the impact of Big Data.
its methodology, practical challenges and implications.
In search of a digital health compass: My data, my decision, our powerchronaki
Knowledge is power. Despite extensive investments in digital health technology, navigating the health system online is challenging for most citizens. Also for eHealth, the “Inverse Care Law” proposed by Hart in 1971, seems to apply. Availability of good medical or social care services and tools online, varies inversely with the need of the population. The low adoption of eHealth services, and persistent disparities in health triggers a call for multidisciplinary action.
Barriers and challenges are not to be underestimated. Culture, education, skills, costs, perceptions of power and role, are essential for multidisciplinary action. This comes together in digital health literacy, which ought to become an integral part to navigate any health system. Patients living with an implanted device or coping with persistent, chronic disease such as diabetes, as well as citizens engaged in self-care, caring for an elderly relative, a neighbor, or their child with illness or deteriorating health, need a digital health compass.
The panel will engage the audience to elaborate on a vision for this personal, digital health compass and drive advancement in health informatics and digital health standards. The transformative power of health data fueled by targeted digital health literacy interventions can be leveraged by open, massive, and individualized delivery. This way, digital health literate, confident patients and citizens join health professionals, researchers and policy makers to address age-related health and wellness changes to shape the emerging precision medicine and population health initiatives.
From a panel in the eHealthweek 2016. http://www.ehealthweek.org/ehome/128630/hl7-efmi-sessions/
Data sharing drivers in precision oncology, biomedical research, and healthcare. Accelerating discovery, innovation, providing credit for all stakeholders - patients, researchers, care providers, payers.
Ethical, Legal, and Social Implications of ELSI Learning Health Systems 2017 Conference, University of Michigan. Learning from the experience and outcomes of every cancer patient
Big Data Provides Opportunities, Challenges and a Better Future in Health and...Cirdan
This presentation was delivered by Ashraf Mina, NSW Pathology at the Pathology Horizons 2017 Conference in Cairns, Australia.
Pathology Horizons 2017 is an annual CPD conference organised by Cirdan on the future of pathology. You can access more information about the event at www.pathologyhorizons.com
The company was founded in 2010 and is headquartered in Lisburn, Northern Ireland and has additional offices in Canada and Australia.
Cirdan is also responsible for organising Pathology Horizons, an annual and open CPD conference on the future of pathology. For more information visit - www.pathologyhorizons.com
Overview of the NIH-funded RADx-UP - Rapid Acceleration of Diagnostics - Underserved Populations (RADx-UP) Coordination and Data Collection Center (CDCC) with a focus on the Common Data Elements used to gather data across the RADx-UP Consortium for COVID-19 testing.
RADx-UP CDCC presentation for the NIH Disaster Interest GroupWarren Kibbe
Presentation on the RADx-Underserved Populations Coordination and Data Collection Center with an emphasis on how it will help understand and reduce the disparities associated with the COVDI-19 pandemic
Data Harmonization for a Molecularly Driven Health SystemWarren Kibbe
Maximizing the value of data, computing, data science in an academic medical center, or 'towards a molecularly informed Learning Health System. Given in October at the University of Florida in Gainesville
Data Harmonization for a Molecularly Driven Health SystemWarren Kibbe
Seminar for Dr. Min Zhang's Purdue Bioinformatics Seminar Series. Touched on learning health systems, the Gen3 Data Commons, the NCI Genomic Data Commons, Data Harmonization, FAIR, and open science.
State of ICS and IoT Cyber Threat Landscape Report 2024 previewPrayukth K V
The IoT and OT threat landscape report has been prepared by the Threat Research Team at Sectrio using data from Sectrio, cyber threat intelligence farming facilities spread across over 85 cities around the world. In addition, Sectrio also runs AI-based advanced threat and payload engagement facilities that serve as sinks to attract and engage sophisticated threat actors, and newer malware including new variants and latent threats that are at an earlier stage of development.
The latest edition of the OT/ICS and IoT security Threat Landscape Report 2024 also covers:
State of global ICS asset and network exposure
Sectoral targets and attacks as well as the cost of ransom
Global APT activity, AI usage, actor and tactic profiles, and implications
Rise in volumes of AI-powered cyberattacks
Major cyber events in 2024
Malware and malicious payload trends
Cyberattack types and targets
Vulnerability exploit attempts on CVEs
Attacks on counties – USA
Expansion of bot farms – how, where, and why
In-depth analysis of the cyber threat landscape across North America, South America, Europe, APAC, and the Middle East
Why are attacks on smart factories rising?
Cyber risk predictions
Axis of attacks – Europe
Systemic attacks in the Middle East
Download the full report from here:
https://sectrio.com/resources/ot-threat-landscape-reports/sectrio-releases-ot-ics-and-iot-security-threat-landscape-report-2024/
UiPath Test Automation using UiPath Test Suite series, part 5DianaGray10
Welcome to UiPath Test Automation using UiPath Test Suite series part 5. In this session, we will cover CI/CD with devops.
Topics covered:
CI/CD with in UiPath
End-to-end overview of CI/CD pipeline with Azure devops
Speaker:
Lyndsey Byblow, Test Suite Sales Engineer @ UiPath, Inc.
Pushing the limits of ePRTC: 100ns holdover for 100 daysAdtran
At WSTS 2024, Alon Stern explored the topic of parametric holdover and explained how recent research findings can be implemented in real-world PNT networks to achieve 100 nanoseconds of accuracy for up to 100 days.
Sudheer Mechineni, Head of Application Frameworks, Standard Chartered Bank
Discover how Standard Chartered Bank harnessed the power of Neo4j to transform complex data access challenges into a dynamic, scalable graph database solution. This keynote will cover their journey from initial adoption to deploying a fully automated, enterprise-grade causal cluster, highlighting key strategies for modelling organisational changes and ensuring robust disaster recovery. Learn how these innovations have not only enhanced Standard Chartered Bank’s data infrastructure but also positioned them as pioneers in the banking sector’s adoption of graph technology.
Dr. Sean Tan, Head of Data Science, Changi Airport Group
Discover how Changi Airport Group (CAG) leverages graph technologies and generative AI to revolutionize their search capabilities. This session delves into the unique search needs of CAG’s diverse passengers and customers, showcasing how graph data structures enhance the accuracy and relevance of AI-generated search results, mitigating the risk of “hallucinations” and improving the overall customer journey.
Essentials of Automations: The Art of Triggers and Actions in FMESafe Software
In this second installment of our Essentials of Automations webinar series, we’ll explore the landscape of triggers and actions, guiding you through the nuances of authoring and adapting workspaces for seamless automations. Gain an understanding of the full spectrum of triggers and actions available in FME, empowering you to enhance your workspaces for efficient automation.
We’ll kick things off by showcasing the most commonly used event-based triggers, introducing you to various automation workflows like manual triggers, schedules, directory watchers, and more. Plus, see how these elements play out in real scenarios.
Whether you’re tweaking your current setup or building from the ground up, this session will arm you with the tools and insights needed to transform your FME usage into a powerhouse of productivity. Join us to discover effective strategies that simplify complex processes, enhancing your productivity and transforming your data management practices with FME. Let’s turn complexity into clarity and make your workspaces work wonders!
The Art of the Pitch: WordPress Relationships and SalesLaura Byrne
Clients don’t know what they don’t know. What web solutions are right for them? How does WordPress come into the picture? How do you make sure you understand scope and timeline? What do you do if sometime changes?
All these questions and more will be explored as we talk about matching clients’ needs with what your agency offers without pulling teeth or pulling your hair out. Practical tips, and strategies for successful relationship building that leads to closing the deal.
GraphRAG is All You need? LLM & Knowledge GraphGuy Korland
Guy Korland, CEO and Co-founder of FalkorDB, will review two articles on the integration of language models with knowledge graphs.
1. Unifying Large Language Models and Knowledge Graphs: A Roadmap.
https://arxiv.org/abs/2306.08302
2. Microsoft Research's GraphRAG paper and a review paper on various uses of knowledge graphs:
https://www.microsoft.com/en-us/research/blog/graphrag-unlocking-llm-discovery-on-narrative-private-data/
Why You Should Replace Windows 11 with Nitrux Linux 3.5.0 for enhanced perfor...SOFTTECHHUB
The choice of an operating system plays a pivotal role in shaping our computing experience. For decades, Microsoft's Windows has dominated the market, offering a familiar and widely adopted platform for personal and professional use. However, as technological advancements continue to push the boundaries of innovation, alternative operating systems have emerged, challenging the status quo and offering users a fresh perspective on computing.
One such alternative that has garnered significant attention and acclaim is Nitrux Linux 3.5.0, a sleek, powerful, and user-friendly Linux distribution that promises to redefine the way we interact with our devices. With its focus on performance, security, and customization, Nitrux Linux presents a compelling case for those seeking to break free from the constraints of proprietary software and embrace the freedom and flexibility of open-source computing.
Observability Concepts EVERY Developer Should Know -- DeveloperWeek Europe.pdfPaige Cruz
Monitoring and observability aren’t traditionally found in software curriculums and many of us cobble this knowledge together from whatever vendor or ecosystem we were first introduced to and whatever is a part of your current company’s observability stack.
While the dev and ops silo continues to crumble….many organizations still relegate monitoring & observability as the purview of ops, infra and SRE teams. This is a mistake - achieving a highly observable system requires collaboration up and down the stack.
I, a former op, would like to extend an invitation to all application developers to join the observability party will share these foundational concepts to build on:
Alt. GDG Cloud Southlake #33: Boule & Rebala: Effective AppSec in SDLC using ...James Anderson
Effective Application Security in Software Delivery lifecycle using Deployment Firewall and DBOM
The modern software delivery process (or the CI/CD process) includes many tools, distributed teams, open-source code, and cloud platforms. Constant focus on speed to release software to market, along with the traditional slow and manual security checks has caused gaps in continuous security as an important piece in the software supply chain. Today organizations feel more susceptible to external and internal cyber threats due to the vast attack surface in their applications supply chain and the lack of end-to-end governance and risk management.
The software team must secure its software delivery process to avoid vulnerability and security breaches. This needs to be achieved with existing tool chains and without extensive rework of the delivery processes. This talk will present strategies and techniques for providing visibility into the true risk of the existing vulnerabilities, preventing the introduction of security issues in the software, resolving vulnerabilities in production environments quickly, and capturing the deployment bill of materials (DBOM).
Speakers:
Bob Boule
Robert Boule is a technology enthusiast with PASSION for technology and making things work along with a knack for helping others understand how things work. He comes with around 20 years of solution engineering experience in application security, software continuous delivery, and SaaS platforms. He is known for his dynamic presentations in CI/CD and application security integrated in software delivery lifecycle.
Gopinath Rebala
Gopinath Rebala is the CTO of OpsMx, where he has overall responsibility for the machine learning and data processing architectures for Secure Software Delivery. Gopi also has a strong connection with our customers, leading design and architecture for strategic implementations. Gopi is a frequent speaker and well-known leader in continuous delivery and integrating security into software delivery.
GraphSummit Singapore | The Future of Agility: Supercharging Digital Transfor...Neo4j
Leonard Jayamohan, Partner & Generative AI Lead, Deloitte
This keynote will reveal how Deloitte leverages Neo4j’s graph power for groundbreaking digital twin solutions, achieving a staggering 100x performance boost. Discover the essential role knowledge graphs play in successful generative AI implementations. Plus, get an exclusive look at an innovative Neo4j + Generative AI solution Deloitte is developing in-house.
LF Energy Webinar: Electrical Grid Modelling and Simulation Through PowSyBl -...DanBrown980551
Do you want to learn how to model and simulate an electrical network from scratch in under an hour?
Then welcome to this PowSyBl workshop, hosted by Rte, the French Transmission System Operator (TSO)!
During the webinar, you will discover the PowSyBl ecosystem as well as handle and study an electrical network through an interactive Python notebook.
PowSyBl is an open source project hosted by LF Energy, which offers a comprehensive set of features for electrical grid modelling and simulation. Among other advanced features, PowSyBl provides:
- A fully editable and extendable library for grid component modelling;
- Visualization tools to display your network;
- Grid simulation tools, such as power flows, security analyses (with or without remedial actions) and sensitivity analyses;
The framework is mostly written in Java, with a Python binding so that Python developers can access PowSyBl functionalities as well.
What you will learn during the webinar:
- For beginners: discover PowSyBl's functionalities through a quick general presentation and the notebook, without needing any expert coding skills;
- For advanced developers: master the skills to efficiently apply PowSyBl functionalities to your real-world scenarios.
Transcript: Selling digital books in 2024: Insights from industry leaders - T...BookNet Canada
The publishing industry has been selling digital audiobooks and ebooks for over a decade and has found its groove. What’s changed? What has stayed the same? Where do we go from here? Join a group of leading sales peers from across the industry for a conversation about the lessons learned since the popularization of digital books, best practices, digital book supply chain management, and more.
Link to video recording: https://bnctechforum.ca/sessions/selling-digital-books-in-2024-insights-from-industry-leaders/
Presented by BookNet Canada on May 28, 2024, with support from the Department of Canadian Heritage.
Transcript: Selling digital books in 2024: Insights from industry leaders - T...
National Cancer Policy Forum Summit - Warren Kibbe Keynote November 2013
1. Opportuni)es
for
Posi)vely
Impac)ng
Cancer
Care
–
an
informa)cs
perspec)ve
Warren
A.
Kibbe,
PhD
warren.kibbe@nih.gov
Center
for
Biomedical
Informa)cs
and
Informa)on
Technology
Na)onal
Cancer
Ins)tute
hHp://wiki.bioinforma)cs.northwestern.edu/index.php/Warren_Kibbe
2. Three
policy
issues
• Informed
Consent
–
what
should
it
enable?
Does
it?
• Iden)fica)on
of
specimens
and
data.
What
is
privacy?
How
do
we
share
appropriately?
Is
that
a
consent
issue?
• Open
access
to
data
–
how
can
we
respect
the
desire
of
pa)ents
to
share
their
specimens
and
data
to
make
truly
transforma)ve
inference
and
observa)ons?
12. Disrup2ve
Technologies
• Printing
• Steam power
• Transportation
• Electricity
• Antibiotics
6.6B
ac2ve
mobile
contracts
1.9B
smart
phone
contracts
• Semiconductors &VLSI design
1.1B
land
lines
US:
• http
345M
ac2ve
mobile
contracts
287M
smart
phone
contracts
• High throughput biology
Everyone
is
a
data
provider
• Ubiquitous computing
Data
immersion
13. GeIng
Social
• Measuring behavior across a population
• Understanding behavior – can we provide better
risk estimates for individuals?
• Social media is a big data opportunity – what are
the ethics of big data?
• Synergize with the energy and immediacy of
patient advocates
• Patients want more data sharing – how can we
facilitate that appropriately?
This
changes
trial
design
–
sta)s)cs
un)l
now
has
been
focused
on
how
to
design
an
appropriate
sample
so
that
the
sample
can
be
generalized
to
the
popula)on
–
what
happens
when
we
measure
the
ENTIRE
popula)on
??
14. Big
Data
• To
me,
Big
Data
is
about
emergent
proper)es
• Big
Data
with
social
media
changes
the
sta)s)cal
paradigm
–
rather
than
modeling
if
a
given
sample
is
representa)ve
of
the
popula)on,
you
have
all
the
data
from
the
popula)on!!
• To
accelerate
solving
real
problems
in
cancer
we
must
combine
systems
biology,
social
data
(behavior
and
exposure)
with
clinical
care
and
outcomes
from
healthcare
providers
15. The
future
• Elastic computing ‘clouds’
• Social networks
• Big Data analytics
• Precision medicine
• Measuring health
• Practicing protective medicine
Seman)c
and
synop)c
data
Intervening
before
health
is
compromised
Learning systems that enable
learning from every cancer patient
16. Open
Data
Access
• We
need
to
provide
data
access
to
people
outside
of
biomedicine
who
have
the
skills
and
training
to
mine
and
analyze
data
• More
access
will
mean
more
innova2on
17. Precision
Oncology
• The
era
of
precision
medicine
and
precision
oncology
is
predicated
on
the
integra)on
of
research,
care,
and
molecular
medicine
and
the
availability
of
data
for
modeling,
risk
analysis,
and
op)mal
care
How
do
we
re-‐engineer
transla8onal
research
policies
that
will
enable
a
true
learning
healthcare
system?
18. Consent
• In
a
learning
healthcare
system,
we
‘learn’
from
every
pa)ent
who
comes
in
for
treatment.
What
is
consent
in
this
model?
What
is
research?
• What
role
is
there
for
standardized
consent?
• Are
there
ways
to
reimagine
transla)onal
research
without
consent?
Would
that
help
us?
19. Iden2fying
informa2on
• Equa)ng
genomic
data
with
a
fingerprint
is
appropriate
• Privacy
needs
to
be
respected
• If
a
pa)ent
consents
to
release
genomic
data,
how
can
we
lower
the
barriers
to
accessing
and
analyzing
their
data
and
genomes?
20. Data
access
• How
do
we
lower
the
barriers
for
accessing
research
data,
including
molecular
informa)on?
• Much
clinical
data
belongs
to
the
pa)ent,
but
pa)ents
should
have
the
right
to
provide
data
and
specimens
for
the
public
good.
How
can
we
honor
that
request?
Is
this
a
way
to
promote
appropriate,
low
barrier
data
access?
If
we
can
provide
pa)ents
with
the
ability
to
change
their
level
of
approval
over
)me,
how
does
that
impact
consent?
21. Thank
You!
• Ques)ons?
Warren
A.
Kibbe
warren.kibbe@nih.gov
22. Ques2ons
• Are
there
beHer
models
for
standardized
consent?
Are
there
ways
to
reimagine
transla)onal
research
without
consent
• If
pa)ents
consent
to
release
genomic
data,
how
can
we
lower
the
barriers
to
accessing
and
analyzing
their
data
and
genomes?
These
data
are
inherently
iden)fying.
• How
do
we
lower
the
barriers
for
accessing
research
data?
Access
to
individual-‐level
data
is
cri)cal
for
precision
medicine,
but
is
mired
in
regula)ons
even
with
appropriate
consents
are
in
place.