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Kyle Schmaus, Stitch Fix
Moment-Based Estimation
for Hierarchical Models in
Apache Spark
#DSSAIS17
Overview
• About Stitch Fix
• Hierarchical (Mixed Effects) Models
• Moment Based Estimation
• Spark Implementation & Application
2#DSSAIS17
Stitch Fix
3#DSSAIS17
Stitch Fix
4#DSSAIS17
Stitch Fix
5#DSSAIS17
Stitch Fix
6#DSSAIS17
Stitch Fix
7#DSSAIS17
Machine learning Human curation
Algorithmic
recommendations
Stitch Fix
• Algorithms Team: 80+ Data Scientists and Data
Engineers
• Data Integrates into every aspect of the
business
• Our Blog: multithreaded.stitchfix.com
8#DSSAIS17
Hierarchical Models Motivation
9#DSSAIS17
ℙ(sale) = ?
Hierarchical Models Motivation
10#DSSAIS17
Color
Cut
Size
Brand
Material
…
Shared Model
ℙ(sale) = "#$
%$
&
'
11#DSSAIS17
ℙ(sale) = "#$
%(
&
'
" ) = log
)
1 − )
Individual Model Per Group
12#DSSAIS17
Individual Model Per Group
13#DSSAIS17
ℙ(sale) = "#$
%&$
ℙ(sale) = "#$
%&'
" ( = log
(
1 − (
Hierarchical Models
14#DSSAIS17
• ![#$] =	()* +$, + .$/$
• /$ ~ 1 0, Σ
• 5 ∈ 1, … , 9
• ,,	/$,	and	Σ are	unknown
Simulation Results
15#DSSAIS17
• ! ∈ 1, … , & = 100
• )* = +*, + .*/* + 0*
• dim , =	dim /* = 11 × 1
• /* ~ 7 0, Σ
• 0* ~ 7 0, 9
• Σ ~ :;< <
<<
9, 11
●
● ● ● ● ● ●
●
●
●
●
● ●
●
●
● ●
●
● ●
●
1.00
1.25
1.50
1.75
3 4 5 6 7
log(n_obs)
rmse
model_type
●
●
●
individual model
mixed model
shared model
RMSE By N Observations Per Group
Software Implementations
16#DSSAIS17
lme4, nlme, mbest, …
statsmodels
MixedModels
Software Implementations
17#DSSAIS17
lme4, nlme, mbest, …
statsmodels
MixedModels
Likelihood Based Methods
Expectation-Maximization, Variational Approximations, or
Likelihood Maximization require an ! "#$
initial cost, then
a series of iterations costing ! %#& , where
• " is the number of total observations
• # the number of fixed and random effects
• % the number of groups
18#DSSAIS17
Moment Based Methods
Using a moment-based approach laid out in Perry (2015)
and implemented in the mbest package, we can achieve
a non-iterative fit in ! "#$ + ! &#' steps. This can be
trivially spread across ( processors.
19#DSSAIS17
Moment Based Methods
Using a moment-based approach laid out in Perry (2015)
and implemented in the mbest package, we can achieve
a non-iterative fit in ! "#$ + ! &#' steps. This can be
trivially spread across ( processors.
This improvement in computational efficiency is paid for by
sacrificing some statistical efficiency.
20#DSSAIS17
Moment Based Setup
!" = $"% + '"(" + )" for * ∈ {1, … , 0}
(" ∼ 3(0, Σ)
)" ∼ 3(0, 89)
(" and )" independent
21#DSSAIS17
Moment Based Setup
• Define !" ≡ $" %" and &"
'
≡ ('
)"
'
• *" = $"( + %")" + -" ⟹
• *" = !"&" + -"
• Estimate /&" = !"
'
!"
0
!"
'
1", for each 3 ∈ 1, … , 7
• Note when !" is rank deficient, /&" is not an
unbiased estimator
22#DSSAIS17
Moment Based Setup
• !" = $"%"&"
'
• (" = $"%"&")
'
• *" = $"%"&"+
'
• ,ϕ = ./+
=
)
012
∑"4)
5
6" − ,!" ̂9"
+
• : ≡ ∑"4)
5
<"
23#DSSAIS17
Estimate !
Ω ≡ $
%&'
(
)%'*%)%'
+
,!- = Ω/'
$
%&'
(
)%'*%)%
+
01%
is an unbiased estimator for !.
24#DSSAIS17
Estiamte !
Say	we	knew	*,	not	just	an	estimate.	Define
• 6 ≡ ∑9:;
<
=9>?9(=9
A
BC9 − =9;
A
*) VG
H
BC9 − =9;
A
*
A
?9=9>
A
• I ≡ ∑9:;
<
=9>?9J9
K>
?9=9>
A
• Ω> ≡ ∑9:;
<
=9>?9=9>
A
⨂=9>?9=9>
A
• vec{ QΣS} = Ω>
K;
vec{6 − VI}
• QΣS is	an	unbiased	estimator	for	Σ
25#DSSAIS17
Estiamte !
• "Σ$ is	an	unbiased	estimator	for	Σ if	you	know	6
a	priori.		We	don’t	…
• Instead,	we	use	 >?.	This	mean	 "Σ$ is	not	an	
unbiased	estimator	in	practice.	
• It	can	be	shown	the	bias	is	often	negligible.	
• We	can	project	 "Σ$ to	be	Positive	Semidefinite
26#DSSAIS17
Estimate !"| $%"
• Using	a	gaussian	approximation	for	p($67|87) and	
p(87), compute	posterior	distribution
– p(87|$67) ∝ p($67|87) p(87)
• There	exists	a	formula	for	C7(Σ) such	that	
– EF(87 G = C7I7J (I7
K
$67 − I7M
K
N)
– OVar(87 G = OQ7C7
27#DSSAIS17
That was a lot of math! Read
Fast moment-based estimation for hierarchical models
on arXiv, it’s a great paper
28#DSSAIS17
Moment Based Estimation Summary
29#DSSAIS17
• Estimate !"#
Moment Based Estimation Summary
30#DSSAIS17
• Estimate !"#
• Use !"# to estimate $%
Moment Based Estimation Summary
31#DSSAIS17
• Estimate !"#
• Use !"# to estimate $%
• Use !"# to estimate &'(
Moment Based Estimation Summary
32#DSSAIS17
• Estimate !"#
• Use !"# to estimate $%
• Use !"# to estimate &'(
• Use !"#, $%, &'( to estimate &Σ(
Moment Based Estimation Summary
33#DSSAIS17
• Estimate !"#
• Use !"# to estimate $%
• Use !"# to estimate &'(
• Use !"#, $%, &'( to estimate &Σ(
• Use !"#, $%, &'(, &Σ( to estimate +#|!"#
lme4 vs mbest
34#DSSAIS17
●
● ●
●
●
●
●
●
●
●
●
●
1.02
1.04
1.06
1.08
1.10
3 4 5 6
log(n_obs)
rmse
model_type
●
●
lmer
mhglm
RMSE By N Observations Per Group
● ● ● ●
●
●
●
●
●
●
●
●
0
2
4
6
3 4 5 6
log(n_obs)
log(seconds)
model_type
●
●
lmer
mhglm
Seconds To Train By N Observations Per Group
Memory Constrained For Large N,	M
• Current software is memory constrained on a
single machine
• My macbook pro (2015) starts to run out of
memory for
– M	=	100,000
– N	=	10,000,000
35#DSSAIS17
Spark Implementation
36#DSSAIS17
Spark Implementation
37#DSSAIS17
Application
Logistic Model with
• N = 120,000,000
• M = 4,000,000
• p = q = 7
• Executors = 8, 16gb memory each
• Running time approximately 40 minutes
38#DSSAIS17
Thank You
github.com/stitchfix/MomentMixedModels
39#DSSAIS17

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