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The Science of 
Microbiology 
CRYSTAL GARCIA
What is Microbiology? 
 Microbiology is a specialized branch of biology that 
studies living organisms, too tiny to be viewed with 
the unaided eye. 
 It’s focus of study are referred to as Microbes or 
Microorganisms 
 Microorganisms live in every part of the biosphere 
(and the vacuum of space) and play a role in all of 
the most essential processes of life including 
Photosynthesis, decomposition and recycling of 
chemical nutrients (e.g. nitrogen fixation)
How is the scientific method 
used in Microbiology? 
 Generally, microorganisms are isolated from 
their environment and studied in a lab under a 
microscope. 
 They are then classified into groups using 
Taxonomy’s Domains of Life system which 
recognize and identify them by specific 
characteristics. Microorganisms are then 
provided with standard scientific names.
The History of Microbiology 
 Set in motion in the late 16th century with the 
creation of the compound microscope by 
Robert Hook and contemporaries 
 Simple microscope-like instrument created by 
Antoine van Leeuwenhoek
Antoine van Leeuwenhoek 
(1632-1723)
Antoine van Leeuwenhoek 
 A Dutch fabric merchant - Leeuwenhoek 
originally intended his instrument to examine 
cloth fabric for flaws. 
 His device would allow microbes to be 
observed and analyzed for the first time in 
human history. 
 Often referred to as “the father of Microbiology” 
though he was incredibly secretive with the 
construction of his microscope
Louis Pasteur (1822–1895) 
biography.com - Louis Pasteur
Louis Pasteur 
 French Chemist considered one of the major 
founding fathers of Microbiology 
 Best known for creating Pasteurization - 
technique of heating then cooling liquids to slow 
bacterial growth 
 Would ultimately demonstrate the importance 
of “proofs” as well as observation and 
experimentation which are the cornerstone 
principles of science.
Spontaneous Generation 
 Theory on the formation of living things 
 Persisted from archaic times until approx. the 
17th and 18th century 
 Proposed that living things formed from non-living 
matter 
 Religious connotation related to the origin of life 
on Earth 
 would have both heated proponents and 
opponents in the scientific community
“ 
” 
I think, Sir, that you are in the wrong, not because 
you believe in spontaneous generation, since it is 
difficult in such matters not to have a preconceived 
idea, but in stating that spontaneous generation 
exists. . . . In my estimation the whole question still 
lacks proofs. . . . 
Pasteur would take a logical stance on the 
subject and demand that more evidence be 
produced before this theory could be referred to 
as Scientific Fact
Pasteur and “Spontaneous 
Generation” 
 Pasteur would devise an experiment that would 
ultimately disprove this theory. 
 Invented the swan neck flask which would be 
the key element in disproving Spontaneous 
Generation 
 With this instrument Pasteur would set sterile 
liquid in an intricately curved flask, allowing it to 
be exposed to air without the risk of 
contamination from dust particles or 
microorganisms in the air.
Pasteur and “Spontaneous 
Generation”
How is Microbiology helpful and 
useful to people?
You Can Thank Microbiology For: 
 Germ Theory - a theory in medicine: infections, 
contagious diseases, and various other 
conditions result from the action of 
microorganisms (merriam-webster) 
 (Medical) Sterilization – any process that 
eliminates (removes) or kills all forms of life 
(Wikipedia)
You Can Thank Microbiology For: 
 Vaccinations - a preparation of killed 
microorganisms, living attenuated organisms, or 
living fully virulent organisms that is administered 
to produce or artificially increase immunity to a 
particular disease (merriam-webster) 
 Pasteurization - a process in which a liquid (such 
as milk or cream) is heated to a temperature 
that kills harmful germs and then cooled quickly 
(meriam-webster)
They’re literally everywhere. 
 Aid in animal digestion 
 Used in food production and fermentation (e.g. 
dairy products, wine, yeast) 
 Used for many commercial and industrial 
production of chemicals, enzymes and other 
bioactive molecules (e.g Citric acid which is 
produced by a certain type of fungus) 
 Used in sewage treatment as well as energy 
fermentation (e.g. ethanol)
Taq polymerase and its influence 
on Genetic Engineering 
 Enzyme isolated from the thermophilic, “Heat- 
Loving”, bacterium Thermus aquaticus. 
 Used as a key enzyme in the denaturing process 
of the Polymerase chain reaction (technique 
used to make multiple copies of a segment DNA 
of interest) 
 Responsible for advances in genetic 
engineering, such as DNA testing, cloning and 
sequencing
Bioremediation 
 Bioremediation is a waste management 
technique that involves the use of organisms to 
remove or neutralize pollutants from a 
contaminated site. According to the EPA, 
bioremediation is a “treatment that uses 
naturally occurring organisms to break down 
hazardous substances into less toxic or non toxic 
substances”.
Bioremediation 
(Left) Alaska. Workers outfitted in safety attire spray benign nutrients for Bioremediation Project on 
the Exxon Valdez oil spill in Prince William Sound.
Info from the Environmental 
Protection Agency on 
Bioremediation 
 Some types of microbes eat and digest 
contaminants, usually changing them into small 
amounts of water and harmless gases 
 (cannot always be treated in situ) It may take a few 
months or even several years for microbes to clean 
up a site, depending on several factors. 
 Bioremediation relies on microbes that live naturally 
in soil and groundwater. These microbes pose no 
threat to people at the site or in the community.

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Microbiology PS 101 fall 2014

  • 1. The Science of Microbiology CRYSTAL GARCIA
  • 2. What is Microbiology?  Microbiology is a specialized branch of biology that studies living organisms, too tiny to be viewed with the unaided eye.  It’s focus of study are referred to as Microbes or Microorganisms  Microorganisms live in every part of the biosphere (and the vacuum of space) and play a role in all of the most essential processes of life including Photosynthesis, decomposition and recycling of chemical nutrients (e.g. nitrogen fixation)
  • 3. How is the scientific method used in Microbiology?  Generally, microorganisms are isolated from their environment and studied in a lab under a microscope.  They are then classified into groups using Taxonomy’s Domains of Life system which recognize and identify them by specific characteristics. Microorganisms are then provided with standard scientific names.
  • 4. The History of Microbiology  Set in motion in the late 16th century with the creation of the compound microscope by Robert Hook and contemporaries  Simple microscope-like instrument created by Antoine van Leeuwenhoek
  • 6. Antoine van Leeuwenhoek  A Dutch fabric merchant - Leeuwenhoek originally intended his instrument to examine cloth fabric for flaws.  His device would allow microbes to be observed and analyzed for the first time in human history.  Often referred to as “the father of Microbiology” though he was incredibly secretive with the construction of his microscope
  • 7. Louis Pasteur (1822–1895) biography.com - Louis Pasteur
  • 8. Louis Pasteur  French Chemist considered one of the major founding fathers of Microbiology  Best known for creating Pasteurization - technique of heating then cooling liquids to slow bacterial growth  Would ultimately demonstrate the importance of “proofs” as well as observation and experimentation which are the cornerstone principles of science.
  • 9. Spontaneous Generation  Theory on the formation of living things  Persisted from archaic times until approx. the 17th and 18th century  Proposed that living things formed from non-living matter  Religious connotation related to the origin of life on Earth  would have both heated proponents and opponents in the scientific community
  • 10. “ ” I think, Sir, that you are in the wrong, not because you believe in spontaneous generation, since it is difficult in such matters not to have a preconceived idea, but in stating that spontaneous generation exists. . . . In my estimation the whole question still lacks proofs. . . . Pasteur would take a logical stance on the subject and demand that more evidence be produced before this theory could be referred to as Scientific Fact
  • 11. Pasteur and “Spontaneous Generation”  Pasteur would devise an experiment that would ultimately disprove this theory.  Invented the swan neck flask which would be the key element in disproving Spontaneous Generation  With this instrument Pasteur would set sterile liquid in an intricately curved flask, allowing it to be exposed to air without the risk of contamination from dust particles or microorganisms in the air.
  • 12. Pasteur and “Spontaneous Generation”
  • 13. How is Microbiology helpful and useful to people?
  • 14. You Can Thank Microbiology For:  Germ Theory - a theory in medicine: infections, contagious diseases, and various other conditions result from the action of microorganisms (merriam-webster)  (Medical) Sterilization – any process that eliminates (removes) or kills all forms of life (Wikipedia)
  • 15. You Can Thank Microbiology For:  Vaccinations - a preparation of killed microorganisms, living attenuated organisms, or living fully virulent organisms that is administered to produce or artificially increase immunity to a particular disease (merriam-webster)  Pasteurization - a process in which a liquid (such as milk or cream) is heated to a temperature that kills harmful germs and then cooled quickly (meriam-webster)
  • 16. They’re literally everywhere.  Aid in animal digestion  Used in food production and fermentation (e.g. dairy products, wine, yeast)  Used for many commercial and industrial production of chemicals, enzymes and other bioactive molecules (e.g Citric acid which is produced by a certain type of fungus)  Used in sewage treatment as well as energy fermentation (e.g. ethanol)
  • 17. Taq polymerase and its influence on Genetic Engineering  Enzyme isolated from the thermophilic, “Heat- Loving”, bacterium Thermus aquaticus.  Used as a key enzyme in the denaturing process of the Polymerase chain reaction (technique used to make multiple copies of a segment DNA of interest)  Responsible for advances in genetic engineering, such as DNA testing, cloning and sequencing
  • 18. Bioremediation  Bioremediation is a waste management technique that involves the use of organisms to remove or neutralize pollutants from a contaminated site. According to the EPA, bioremediation is a “treatment that uses naturally occurring organisms to break down hazardous substances into less toxic or non toxic substances”.
  • 19. Bioremediation (Left) Alaska. Workers outfitted in safety attire spray benign nutrients for Bioremediation Project on the Exxon Valdez oil spill in Prince William Sound.
  • 20. Info from the Environmental Protection Agency on Bioremediation  Some types of microbes eat and digest contaminants, usually changing them into small amounts of water and harmless gases  (cannot always be treated in situ) It may take a few months or even several years for microbes to clean up a site, depending on several factors.  Bioremediation relies on microbes that live naturally in soil and groundwater. These microbes pose no threat to people at the site or in the community.