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Microbial life in extreme environments
Effects of Heavy Metal on Microbial
Growth
Editor- shankar. K
Dr. Shankar K
Assisstant Profesor of Microbiology (2019-2020)
Mohmaed sathak college of arts and science,
shollignallur, chennai.
Resource Paper
Toxicity and Bioremediation of Heavy Metals
Contaminated Ecosystem from Tannery
Wastewater: A Review
Bernard Et al., 2018.
Introduction
 Industrial wastewater is a major source of heavy metal
contamination in our environment. Heavy metals are the most
important pollutants in the environment.
 Environmental pollution by heavy metals has become a serious
threat to living organisms in an ecosystem.
 Metal toxicity is of great environmental concern because of
their bioaccumulation and non-biodegradability in nature.
 Essential inorganic metals, Magnesium (Mg), Nickel (Ni),
Chromium (Cr3+), copper (Cu),Calcium (Ca), Manganese (Mn),
sodium (Na) and zinc (Zn) are vital elements needed in small
quantity for metabolic and redox functions.
 Non essential metals, Heavy metals such as Aluminium (Al), Lead
(Pb), Cadmium(Cd), Gold (Au), Mercury (Hg), and Silver (Ag) do not
have any biological role and are toxic to living organisms.
 The transformation of toxic heavy metals into a less harmful state
using microbes or its enzymes to clean-up polluted environment is
called bioremedation.
 Bioremedation methods are environmentally friendly and cost-
effective in the revitalization of the environment.
 Biofilm-mediated bioremediation can be applied for cleaning up of
heavy metal contaminated environment.
 Microbial-metal interactions is primarily focused on metals
removal, i.e., remediation and depollution.
Toxicity of heavy metals to microorganisms
 Toxicity of heavy metals is the ability of a metal to cause
detrimental effects on microorganisms, and it depends on the
bioavailability of heavy metal and the absorbed dose.
 Heavy metal toxicity involves several mechanisms, that is,
breaking fatal enzymatic functions, reacting as redox catalysts in
the production of reactive oxygen species (ROS), destructing ion
regulation, and directly affecting the formation of DNA as well as
protein.
 Factors affecting microbial remedation of heavy metals
The propensity of heavy metals to be stimulatory or
inhibitory to microorganisms is determined by the total
metal ion concentrations, chemical forms of the metals, and
related factors such as redox potential.
Factors Affecting Microbial Remediation of
 Environmental factors like temperature, pH, low molecular weight
organic acids, and humic acids can alter the transformation,
transportation, valance state of heavy metals, and the
bioavailability of heavy metals towards microorganisms.
1. pH
Heavy metals tend to form free ionic species at acidic pH levels,
with more protons available to saturate metal-binding sites. At
higher hydrogen ion concentrations, the adsorbent surface is
more positively charged, hence reducing the attraction
between adsorbent and metal cations thereby increasing its
toxicity.
2. Temperature
 Temperature plays a significant role in the adsorptionof heavy
metals. Increase in temperature increases the rate of adsorbate
diffusion across the external boundary layer.
 The solubility of heavy metals increases with an increase in
temperature, which improves the bioavailability of heavy metals.
 The actions of microorganisms increase with rise in temperature
at a suitable range, and it enhances microbial metabolism and
enzyme activity, whichwill accelerate bioremediation.
3. Stability
 The stability of microbes metal complex depends on the sorption
sites, microbial cell wall configuration, and ionization of chemical
moieties on the cell wall. The outcome of degradation process
depends on the substrate and range of environmental factors.
Factors that influence bioremediation of heavy metals
• Microbes
– Production of toxic metabolites, Enzymes induction, Mutation
and horizontal gene transfer Enrichment of capable microbial
populations.
• Substrate
– Chemical structure of contaminants, Too low concentration of
contaminants, Toxicity of contaminants Solubility of contaminants.
• Environmental
– Inhibitory Environmental conditions, Depletion of preferential
substrates, Lack of nutrients.
• Mass transfer limitations
– Oxygen diffusion and solubility, Solubility/miscibility in/with
water, Diffusion of nutrients
• Growth substrate vs. Co-metabolism
– Microbial interaction( competition, succession, and predation),
Concentration, Alternate carbon source present
• Biological aerobic vs. Anaerobic process
– Microbial population present in the site, Oxidation/reduction
potential, Availability of electron acceptors
Mechanism of Microbial Detoxification of
Heavy Metal
 Microorganisms adopt different mechanisms to interact and survive
in the presence of inorganic metals.
 Various mechanisms used by microbes to survive metal toxicity are,
o Biotransformation, Extrusion,
o Use of enzymes,
o Production of exo-polysaccharide (EPS), and
o Synthesis of metallo-thioneins.
 In response to metals in the environment, microorganisms have
developed ingenious mechanisms of metal resistance and
detoxification.
 The mechanism involves several procedures, together with
electrostatic interaction, ion exchange, precipitation, redox process,
and surface complexation.
 Microorganisms can decontaminate metals by valence conversion,
volatilization, or extracellular chemical precipitation.
 Microorganisms have negative charge on their cell surface because of
the presence of anionic structures that empower the microbes to
bind to metal cations.
 The negatively charged sites of microbes involved in adsorption of
metal are the hydroxyl, alcohol, phosphoryl, amine, carboxyl, ester,
sulfhydryl, sulfonate, thioether, and thiol groups.
 Bio Sorption
The uptake of heavy metals by microbial cells through
biosorption mechanisms can be classified into
I. Metabolism-independent biosorption,
II. Metabolism-dependent bioaccumulation.
Mechanisms of heavy metal uptake by
microorganisms
Bioaccumulation depends on a variety of chemical, physical, and biological
mechanisms and these factors are intracellular and extracellular processes, where
biosorption plays a limited and ill-defined role
Intracellular Sequestration.
 Intracellular sequestration is the complexation of metal ions by
various compounds in the cell cytoplasm. The concentration of
metals within microbial cells can result from interaction with
surface ligands followed by slow transport into the cell.
Bacteria
 The ability of bacterial cells to accumulate metals intracellular has
been exploited in practices, predominantly in the effluent
treatment
 Cadmium-tolerant P. putida strain possessed the ability of
intracellular sequestration of copper, cadmium, and zinc ions with
the help of cysteine-rich low molecular weight proteins
 Intracellular sequestration of cadmium ions by glutathione was
revealed in Rhizobium leguminosarum cells.
Fungi
 The rigid cell wall of fungi is made up of chitin, mineral ions, lipids,
nitrogen-containing polysaccharide, polyphosphates, and proteins.
 They can clean metal ions by energetic uptake, extracellular and
intracellular precipitation, and valence conversion, with several fungi
accumulating metals to their mycelium and spores.
 The exterior of the cell wall of fungi behaves like a ligand used for
labelling metal ions and brings about the elimination of inorganic
metals.
 Peptidoglycan, polysaccharide, and lipid are components of cell wall
that are rich in metal-binding ligands (e.g., -OH, -COOH, -HPO42−,
SO42− -RCOO−, R2OSO3−, -NH2, and-SH).
 Amine can be more active in metal uptake among these functional
groups, as it binds to anionic metal species via electrostatic
interaction and cationic metal species through surface complexation.
Extracellular Sequestration
 Extracellular sequestration is the accumulation of metal ions by
cellular components in the periplasm or complexation of metal ions
as insoluble compounds.
 Copper-resistant Pseudomonas syringae strains produced copper-
inducible proteins Cop A, Cop B (periplasmic proteins), and Cop C
(outer membrane protein) which bind copper ions and microbial
colonies.
 Bacteria can eject metal ions from the cytoplasm to sequester the
metal within the periplasm. Metal precipitation is an extracellular
sequestration.
 Iron reducing bacterium such as Geobacter spp. and sulfur reducing
bacterium like Desulfuromonas spp. are capable of reducing harmful
metals to less or nontoxic metals.
 G.metallireducens, a strict anaerobe, is capable of reducing manganese
(Mn), from lethal Mn (IV) to Mn (II), and uranium (U), from poisonous U
(VI) to U (IV) .
 G. Sulfurreducens and G. metallireducens have the ability to decrease
chromium (Cr) from the very lethal Cr (VI) to less toxic Cr (III).
 Sulfate-reducing bacteria generate large amounts of hydrogen sulfide
that causes precipitation of metal cations.
 Klebsiella planticola strain generates hydrogen sulfide from thiosulfate
under anaerobic conditions and precipitated cadmium ions as insoluble
sulfides.
 Cadmium was precipitated by P. aeruginosa strain under aerobic
conditions.
 Vibrio harveyi strain precipitated soluble divalent lead as complex lead
phosphate salt.
Extracellular Barrier of Preventing Metal Entry into
Microbial Cell.
Microbial plasma membrane, cell wall, or capsule could prevent metal ions
from entering the cell.
Bacteria can adsorb metal ions by ionizable groups of the cell wall (amino,
carboxyl, phosphate, and hydroxyl groups) .
Passive biosorption of heavy metal ions is observed by nonviable cells of
Pseudomonas putida, Brevibacterium sp., and Bacillus sp.
Pseudomonas aeruginosa biofilm cells show higher resistance to ions of
copper, lead, and zinc than planktonic cells, while cells located at the periphery
of the biofilm were killed.
Extracellular polymers of biofilm accumulated metal ions and then protect
bacterial cells inside the biofilm.
Methylation of Metals
 Methylation increases metal toxicity as a result of increased
lipophilicity and thus increased permeation across cell membranes.
 Microbial methylation plays a significant function in metal
remediation.
 Methylated compounds are regularly explosive; for instance, Hg (II)
canbe bio methylated by some bacteria such as Bacillus spp.,
Escherichia spp., Clostridiumspp., and Pseudomonas spp. to gaseous
methyl mercury.
 Bio methylation of selenium (Se) to volatile dimethyl selenide and
arsenic (As) to gaseous arsines as well as lead (Pb) to dimethyl lead
was witnessed in polluted top soil.
Reduction of Heavy Metal Ions by Microbial Cell
 Microbial cells can convert metal ion from one oxidation state
to another, hence reducing their harmfulness .
 Bacteria use metals and metalloids as electron donors or acceptors
for energy generation.
 Metals in the oxidized form could serve as terminal acceptors of
electrons during anaerobic respiration of bacteria.
 Reduction of metal ions through enzymatic activity could result in
formation of less toxic form of mercury and chromium.
THANK YOU
3RD BSC “B” Section (2017-2020)
MICROBIOLOGY
MSCAS, Chennai.

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Microbial life in heavy metal environment

  • 1. Microbial life in extreme environments Effects of Heavy Metal on Microbial Growth Editor- shankar. K Dr. Shankar K Assisstant Profesor of Microbiology (2019-2020) Mohmaed sathak college of arts and science, shollignallur, chennai.
  • 2. Resource Paper Toxicity and Bioremediation of Heavy Metals Contaminated Ecosystem from Tannery Wastewater: A Review Bernard Et al., 2018.
  • 3. Introduction  Industrial wastewater is a major source of heavy metal contamination in our environment. Heavy metals are the most important pollutants in the environment.  Environmental pollution by heavy metals has become a serious threat to living organisms in an ecosystem.  Metal toxicity is of great environmental concern because of their bioaccumulation and non-biodegradability in nature.  Essential inorganic metals, Magnesium (Mg), Nickel (Ni), Chromium (Cr3+), copper (Cu),Calcium (Ca), Manganese (Mn), sodium (Na) and zinc (Zn) are vital elements needed in small quantity for metabolic and redox functions.
  • 4.  Non essential metals, Heavy metals such as Aluminium (Al), Lead (Pb), Cadmium(Cd), Gold (Au), Mercury (Hg), and Silver (Ag) do not have any biological role and are toxic to living organisms.  The transformation of toxic heavy metals into a less harmful state using microbes or its enzymes to clean-up polluted environment is called bioremedation.  Bioremedation methods are environmentally friendly and cost- effective in the revitalization of the environment.  Biofilm-mediated bioremediation can be applied for cleaning up of heavy metal contaminated environment.  Microbial-metal interactions is primarily focused on metals removal, i.e., remediation and depollution.
  • 5. Toxicity of heavy metals to microorganisms  Toxicity of heavy metals is the ability of a metal to cause detrimental effects on microorganisms, and it depends on the bioavailability of heavy metal and the absorbed dose.  Heavy metal toxicity involves several mechanisms, that is, breaking fatal enzymatic functions, reacting as redox catalysts in the production of reactive oxygen species (ROS), destructing ion regulation, and directly affecting the formation of DNA as well as protein.  Factors affecting microbial remedation of heavy metals The propensity of heavy metals to be stimulatory or inhibitory to microorganisms is determined by the total metal ion concentrations, chemical forms of the metals, and related factors such as redox potential. Factors Affecting Microbial Remediation of
  • 6.  Environmental factors like temperature, pH, low molecular weight organic acids, and humic acids can alter the transformation, transportation, valance state of heavy metals, and the bioavailability of heavy metals towards microorganisms. 1. pH Heavy metals tend to form free ionic species at acidic pH levels, with more protons available to saturate metal-binding sites. At higher hydrogen ion concentrations, the adsorbent surface is more positively charged, hence reducing the attraction between adsorbent and metal cations thereby increasing its toxicity.
  • 7. 2. Temperature  Temperature plays a significant role in the adsorptionof heavy metals. Increase in temperature increases the rate of adsorbate diffusion across the external boundary layer.  The solubility of heavy metals increases with an increase in temperature, which improves the bioavailability of heavy metals.  The actions of microorganisms increase with rise in temperature at a suitable range, and it enhances microbial metabolism and enzyme activity, whichwill accelerate bioremediation. 3. Stability  The stability of microbes metal complex depends on the sorption sites, microbial cell wall configuration, and ionization of chemical moieties on the cell wall. The outcome of degradation process depends on the substrate and range of environmental factors.
  • 8. Factors that influence bioremediation of heavy metals • Microbes – Production of toxic metabolites, Enzymes induction, Mutation and horizontal gene transfer Enrichment of capable microbial populations. • Substrate – Chemical structure of contaminants, Too low concentration of contaminants, Toxicity of contaminants Solubility of contaminants. • Environmental – Inhibitory Environmental conditions, Depletion of preferential substrates, Lack of nutrients.
  • 9. • Mass transfer limitations – Oxygen diffusion and solubility, Solubility/miscibility in/with water, Diffusion of nutrients • Growth substrate vs. Co-metabolism – Microbial interaction( competition, succession, and predation), Concentration, Alternate carbon source present • Biological aerobic vs. Anaerobic process – Microbial population present in the site, Oxidation/reduction potential, Availability of electron acceptors
  • 10. Mechanism of Microbial Detoxification of Heavy Metal  Microorganisms adopt different mechanisms to interact and survive in the presence of inorganic metals.  Various mechanisms used by microbes to survive metal toxicity are, o Biotransformation, Extrusion, o Use of enzymes, o Production of exo-polysaccharide (EPS), and o Synthesis of metallo-thioneins.  In response to metals in the environment, microorganisms have developed ingenious mechanisms of metal resistance and detoxification.  The mechanism involves several procedures, together with electrostatic interaction, ion exchange, precipitation, redox process, and surface complexation.
  • 11.  Microorganisms can decontaminate metals by valence conversion, volatilization, or extracellular chemical precipitation.  Microorganisms have negative charge on their cell surface because of the presence of anionic structures that empower the microbes to bind to metal cations.  The negatively charged sites of microbes involved in adsorption of metal are the hydroxyl, alcohol, phosphoryl, amine, carboxyl, ester, sulfhydryl, sulfonate, thioether, and thiol groups.  Bio Sorption The uptake of heavy metals by microbial cells through biosorption mechanisms can be classified into I. Metabolism-independent biosorption, II. Metabolism-dependent bioaccumulation.
  • 12. Mechanisms of heavy metal uptake by microorganisms Bioaccumulation depends on a variety of chemical, physical, and biological mechanisms and these factors are intracellular and extracellular processes, where biosorption plays a limited and ill-defined role
  • 13. Intracellular Sequestration.  Intracellular sequestration is the complexation of metal ions by various compounds in the cell cytoplasm. The concentration of metals within microbial cells can result from interaction with surface ligands followed by slow transport into the cell. Bacteria  The ability of bacterial cells to accumulate metals intracellular has been exploited in practices, predominantly in the effluent treatment  Cadmium-tolerant P. putida strain possessed the ability of intracellular sequestration of copper, cadmium, and zinc ions with the help of cysteine-rich low molecular weight proteins  Intracellular sequestration of cadmium ions by glutathione was revealed in Rhizobium leguminosarum cells.
  • 14. Fungi  The rigid cell wall of fungi is made up of chitin, mineral ions, lipids, nitrogen-containing polysaccharide, polyphosphates, and proteins.  They can clean metal ions by energetic uptake, extracellular and intracellular precipitation, and valence conversion, with several fungi accumulating metals to their mycelium and spores.  The exterior of the cell wall of fungi behaves like a ligand used for labelling metal ions and brings about the elimination of inorganic metals.  Peptidoglycan, polysaccharide, and lipid are components of cell wall that are rich in metal-binding ligands (e.g., -OH, -COOH, -HPO42−, SO42− -RCOO−, R2OSO3−, -NH2, and-SH).  Amine can be more active in metal uptake among these functional groups, as it binds to anionic metal species via electrostatic interaction and cationic metal species through surface complexation.
  • 15. Extracellular Sequestration  Extracellular sequestration is the accumulation of metal ions by cellular components in the periplasm or complexation of metal ions as insoluble compounds.  Copper-resistant Pseudomonas syringae strains produced copper- inducible proteins Cop A, Cop B (periplasmic proteins), and Cop C (outer membrane protein) which bind copper ions and microbial colonies.  Bacteria can eject metal ions from the cytoplasm to sequester the metal within the periplasm. Metal precipitation is an extracellular sequestration.  Iron reducing bacterium such as Geobacter spp. and sulfur reducing bacterium like Desulfuromonas spp. are capable of reducing harmful metals to less or nontoxic metals.
  • 16.  G.metallireducens, a strict anaerobe, is capable of reducing manganese (Mn), from lethal Mn (IV) to Mn (II), and uranium (U), from poisonous U (VI) to U (IV) .  G. Sulfurreducens and G. metallireducens have the ability to decrease chromium (Cr) from the very lethal Cr (VI) to less toxic Cr (III).  Sulfate-reducing bacteria generate large amounts of hydrogen sulfide that causes precipitation of metal cations.  Klebsiella planticola strain generates hydrogen sulfide from thiosulfate under anaerobic conditions and precipitated cadmium ions as insoluble sulfides.  Cadmium was precipitated by P. aeruginosa strain under aerobic conditions.  Vibrio harveyi strain precipitated soluble divalent lead as complex lead phosphate salt.
  • 17. Extracellular Barrier of Preventing Metal Entry into Microbial Cell. Microbial plasma membrane, cell wall, or capsule could prevent metal ions from entering the cell. Bacteria can adsorb metal ions by ionizable groups of the cell wall (amino, carboxyl, phosphate, and hydroxyl groups) . Passive biosorption of heavy metal ions is observed by nonviable cells of Pseudomonas putida, Brevibacterium sp., and Bacillus sp. Pseudomonas aeruginosa biofilm cells show higher resistance to ions of copper, lead, and zinc than planktonic cells, while cells located at the periphery of the biofilm were killed. Extracellular polymers of biofilm accumulated metal ions and then protect bacterial cells inside the biofilm.
  • 18. Methylation of Metals  Methylation increases metal toxicity as a result of increased lipophilicity and thus increased permeation across cell membranes.  Microbial methylation plays a significant function in metal remediation.  Methylated compounds are regularly explosive; for instance, Hg (II) canbe bio methylated by some bacteria such as Bacillus spp., Escherichia spp., Clostridiumspp., and Pseudomonas spp. to gaseous methyl mercury.  Bio methylation of selenium (Se) to volatile dimethyl selenide and arsenic (As) to gaseous arsines as well as lead (Pb) to dimethyl lead was witnessed in polluted top soil.
  • 19. Reduction of Heavy Metal Ions by Microbial Cell  Microbial cells can convert metal ion from one oxidation state to another, hence reducing their harmfulness .  Bacteria use metals and metalloids as electron donors or acceptors for energy generation.  Metals in the oxidized form could serve as terminal acceptors of electrons during anaerobic respiration of bacteria.  Reduction of metal ions through enzymatic activity could result in formation of less toxic form of mercury and chromium.
  • 20. THANK YOU 3RD BSC “B” Section (2017-2020) MICROBIOLOGY MSCAS, Chennai.