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
SANGER SEQUENCING
OR
CHAIN TERMINATION
METHOD
 Developed by Frederick Sanger and colleagues in
1977,
 it was the most widely used sequencing method
for approximately 25 years after its discovery.
 He got NOBEL PRIZE in 1980.
HISTORY

 It is method to find out the nucleotides Sequence of unknown
DNA strand.
 More recently, Sanger sequencing has been upgraded as "Next-
Generation“ sequencing methods, especially for large scale
genome analyses and for obtaining especially long DNA
sequence reads (>500 nucleotides).
INTRODUCTION


 This method generally is an In-Vitro synthesis of DNA strand
and by using terminators (di-deoxynucleotide) the growing
strand terminates at specific site.
 Upon termination the strands are overlap to got original
sequence of unknown DNA Strand.
BASIC PRINCIPLE
ddA
ddA
ddA
ddA
ddATP in the
reaction:
anywhere there’s
a T in the template
strand,
occasionally a ddA
will be added to
the growing strand
5’
3’ T T
T T
 Single Stranded template
 Primer
 DNA polymerase
 Di-Deoxynucleotide
 The 3′-OH group necessary for
formation of the phosphodiester bond
is missing in ddNTPs)
 Every nucleotide have its specific
ddNTP form i.e., ddATP, ddGTP etc
REQUIREMENTS

 Steps:
1. Denaturation
2. Primer attachment and extension of bases
3. Termination
4. Gel electrophoresis
PROCEDURE

 The DNA template is treated with heat so that it becomes single
stranded
 A short, single-stranded primer which is radioactively labelled
is added to the end of the DNA template
 Add template DNA and primer in 4 Tubes.
 Now add ddNTPs In tubes in the way that single tube contain
one type of ddNTP.
 Extension is start and band formed of varioussizes.
 The fragments of DNA are separated by electrophoresis
 Overlap these sequences to find out sequence of TargetDNA.
Cont….



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lectureno19-1512gkvfjhghhhkhghgfygfghhhhhhh

  • 1.
  • 3.  Developed by Frederick Sanger and colleagues in 1977,  it was the most widely used sequencing method for approximately 25 years after its discovery.  He got NOBEL PRIZE in 1980. HISTORY 
  • 4.  It is method to find out the nucleotides Sequence of unknown DNA strand.  More recently, Sanger sequencing has been upgraded as "Next- Generation“ sequencing methods, especially for large scale genome analyses and for obtaining especially long DNA sequence reads (>500 nucleotides). INTRODUCTION 
  • 5.   This method generally is an In-Vitro synthesis of DNA strand and by using terminators (di-deoxynucleotide) the growing strand terminates at specific site.  Upon termination the strands are overlap to got original sequence of unknown DNA Strand. BASIC PRINCIPLE ddA ddA ddA ddA ddATP in the reaction: anywhere there’s a T in the template strand, occasionally a ddA will be added to the growing strand 5’ 3’ T T T T
  • 6.  Single Stranded template  Primer  DNA polymerase  Di-Deoxynucleotide  The 3′-OH group necessary for formation of the phosphodiester bond is missing in ddNTPs)  Every nucleotide have its specific ddNTP form i.e., ddATP, ddGTP etc REQUIREMENTS 
  • 7.  Steps: 1. Denaturation 2. Primer attachment and extension of bases 3. Termination 4. Gel electrophoresis PROCEDURE 
  • 8.  The DNA template is treated with heat so that it becomes single stranded  A short, single-stranded primer which is radioactively labelled is added to the end of the DNA template  Add template DNA and primer in 4 Tubes.  Now add ddNTPs In tubes in the way that single tube contain one type of ddNTP.  Extension is start and band formed of varioussizes.  The fragments of DNA are separated by electrophoresis  Overlap these sequences to find out sequence of TargetDNA. Cont…. 
  • 9.