This document provides an agenda and overview for a two-day workshop on leading research and innovation in expert organisations. Day one will cover topics such as culture and leadership, governance models, examples from other organisations, and new ways of working supported by social media. Day two focuses on managing innovation from idea to implementation, portfolio management, reward systems, and stakeholder relationships. Examples of innovative practices from companies like IBM, Google and Lego will be presented, as well as examples from universities and open source communities. The workshop aims to provide participants with tools and examples for enhancing innovation in research centres, governments and corporations.