Presentation on the introduction to pharmaceutical microbiology rather Introduction to microbiology, its history and branches.
It is comprising of contributions of some microbiologists like Robert Koch, Louis Pasteur, Paul Ehrlich and father f microbiology: Antony Van Leeuwenhoek.
The presentation covers various areas in bacteriology such as bacterial binary fission, Bacterial growth curve, synchronous growth and continuous growth, Isolation of bacterial pure culture and Preservation of bacterial pure culture.
This is presentation about classification and nutrition of bacteria. Bacteria are classified depending on various parameters viz. cell wall, temperature, air, salt concentration, Pressure, presence of flagella, pH etc.
Qualitative test of phenols
Litmus test
Ferric chloride test
aniline dye test
Pthalein test
Bromine water test
Cerric ammonium nitrate test
Libermans test
Unit 1- Effects of substituents on Mono substituted benzene RingAnjali Bhardwaj
Effects of substituents on reactivity and orientation of monosubstituted benzene compounds towards electrophilic substitution reaction
Activating & Deactivating group
Ortho and Para Directing group
Meta directing group
substitution on the benzene ring
Halides are Ortho & Para directing group why?
GROWTH OF BACTERIA CANNOT BE MEASURED DIRECTLY BY SEEING THEM AS THEY ARE MICROSCOPIC STRUCTURES THEREFORE WE HAVE TO USE SEVERAL METHODS WHICH ARE DESCRIBED IN THIS PRESENTATION
The presentation covers various areas in bacteriology such as bacterial binary fission, Bacterial growth curve, synchronous growth and continuous growth, Isolation of bacterial pure culture and Preservation of bacterial pure culture.
This is presentation about classification and nutrition of bacteria. Bacteria are classified depending on various parameters viz. cell wall, temperature, air, salt concentration, Pressure, presence of flagella, pH etc.
Qualitative test of phenols
Litmus test
Ferric chloride test
aniline dye test
Pthalein test
Bromine water test
Cerric ammonium nitrate test
Libermans test
Unit 1- Effects of substituents on Mono substituted benzene RingAnjali Bhardwaj
Effects of substituents on reactivity and orientation of monosubstituted benzene compounds towards electrophilic substitution reaction
Activating & Deactivating group
Ortho and Para Directing group
Meta directing group
substitution on the benzene ring
Halides are Ortho & Para directing group why?
GROWTH OF BACTERIA CANNOT BE MEASURED DIRECTLY BY SEEING THEM AS THEY ARE MICROSCOPIC STRUCTURES THEREFORE WE HAVE TO USE SEVERAL METHODS WHICH ARE DESCRIBED IN THIS PRESENTATION
Preservation of pharmaceutical products using antimicrobial agents. PHARMACEU...Ms. Pooja Bhandare
PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-VPart-3
Preservation of pharmaceutical products using antimicrobial agents.
Introduction. Ideal Properties of Preservatives:
Antimicrobial Chemical Preservatives
Development of a Preservative System.
Factors affecting efficacy of a preservative: 1. Interaction With components of the formulation
2. Properties of the Preservatives:
3) Effect of Containers.
4) Type of microbes:
5) Influence of pH:
Challenge Test: Efficacy Test of Preservative : Medium used, Choice of test organism:
Preparation of the inoculum:
Procedure:
Interpretation of Results:
Evaluation of Bactericidal and Bacteriostatic (Disinfectant). PHARMACEUTICAL ...Ms. Pooja Bhandare
PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-III Part-5 Evaluation of Bactericidal and Bacteriostatic (Disinfectant). The common methods used for evaluation of a disinfectant are as follows,
Tube Dilution Method.
Agar Plate Method.
Filter Paper & Cup Plate Method.
Ditch-Plate Method.
Phenol Coefficient Method.
The official phenol coefficient tests include,
Rideal-Walker Test (RW Test).
Chick-Martin Test.
United States FDA Test for Phenol Coefficient. (FDA Test)
The US Association of Official Agricultural Chemists Test (FDA Test)
A. Rideal-Walker Test:
Kelsey Sykes Method
PHARMACEUTICAL MICROBIOLOGY (BP303T) Unit-III Part-1 Study of morphology, cla...Ms. Pooja Bhandare
PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-IIIPart-1Study of morphology, classification, reproduction/replication and cultivation of fungi, Introduction fungi. Morphological Characteristics of fungi, CLASSIFICATION: Depending on cell morphology, fungi can be divided into 4 classes:
Moulds Yeasts ,Yeast like fungi and
Dimorphic fungi
Depending on their sexual spores formation fungi are divided into 4 classes:
Zygomycetes Ascomycetes
Basidiomycetes Dueteromycetes
Reproduction and sporulation;Vegetative, Asexual
and Sexual
Vegetative reproduction: Fragmentation ,Fission, budding, Sclerotia Rhizomorphs
Asexual reproduction: Zoospores
Sporangiospore, Conidia
Oidia Uredospores ,Basidiospores
Sexual reproduction:Planogametic copulation: Isogamy Heterogamy
Gametangial contact
Gametangial copulation Spermatization Somatogamy CULTIVATION OF FUNGI: Brain Heart Infusion (BHT) agar
Czapek’s agar
Mycobiotic agar Inhibitory mold agar (IMA)
Potato dextrose agar
Sabouraud’s dextrose agar (SDA):
Sabouraud’s heart infusion (SABHI) agar
Potato Flake agar
Potato dextrose-yeast extract agar (PDYA)
. Cornmeal agar
Malt extract agar (MEA)
Assessment of microbial contamination and spoilage. PHARMACEUTICAL MICROBIOLO...Ms. Pooja Bhandare
PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-VPart-2
Assessment of microbial contamination and spoilage.
Assessment of microbial contamination and spoilage
1. Physical and chemical changes:
2. Assessment of viable microorganisms in non-sterile products:
3. Sterility test:
4. Estimation of pyrogens:
Microbial Limit Tests:
Total Aerobic Microbial Count:
Membrane Filtration.
Plate Count Methods.
Pour Plate Method.
Surface spread Method.
Most Probable Number(MPN)
Designing of aseptic area, laminar flow equipment: Study of different source ...Ms. Pooja Bhandare
Designing of aseptic area, laminar flow equipment: Study of different source of contamination in aseptic area and methods of prevention, clean area classification. PHARMACEUTICALMICROBIOLOGY (BP303T)Unit-IVPart-1
Introduction: Designing of Aseptic Area . i) The clean-up area,
ii) The compounding area,
iii) The aseptic area,
iv) The quarantine area and
v) The packaging/labelling area.
Flow diagram of aseptic area. Floors, walls and ceilings, Doors, windows and services Personnel and protective clothing Cleaning and disinfection. Air Supply. Laminar flow equipment. Vertical laminar air flow bench
Horizontal laminar air flow bench
High Efficiency Particulate Air (HEPA) Filter. Operating Instructions Uses of Laminar Air Flow.Advantages of Laminar Air Flow.Limitations of Laminar Air Flow. Air flow pattern Unidirectional airflow
Non-unidirectional airflow
Combined airflow
Different Sources of Contamination in an Aseptic Area
1) Personnel:
2) Buildings and Facilities
3) Equipment and Utensils:
4) Raw Materials
5) Manufacturing Process:
Methods of Prevention of Contamination Clean Area Classification
VIRUS PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-IIIPart-2Study of morphology, ...Ms. Pooja Bhandare
PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-IIIPart-2Study of morphology, classification, reproduction/replication and cultivation of Virus. Introduction, Def General characteristics of Viruses: small size characteristic shapes, obligate intracellular parasites no built-in metabolic machinery no ribosomes
only one type of nucleic acid
do not grow in size. Morphology of Virus: Helical, Polyhedral (Icosahedral) Viral Envelop, Complex virus, Classification of virus. Viral Replication LIFE CYCLE OF BACTIRIOPHAGES Lytic cycle: Attachment, Penetration, Biosynthesis, Maturation and Release of progeny Phage Particles. The Lysogenic Cycle, Cultivation of virus : Animal inoculation, Embryonated eggs or chick embryo method and Tissue culture or cell culture: Organ cultures Explant culture and Cell culture. Types of cell culture
1.Primary cell culture: 2. Diploid cell culture (Semi-continuous cell lines):3. Heteroploid cultures (Continuous cell lines):
MULTIPLICATION OF HUMAN VIRUS:1. Attachment of Viral Particles 2. Penetration 3. Uncoating 4. Replication Of Viral Nucleic Acids And Translation Of The Genome 5) Maturation Or Assembly Of Virions. ) 6. Release Of Virions Into The Surrounding Environment
Aseptic Area and Microbial Control. - Pharmaceutical Microbiology (SYBpharm) ...Kiran Shinde
Prof.Mr.Kiran K. Shinde (M.Pharm), Assistant professor (VNIPRC)
Pharmaceutical microbiology (Second year b.pharm) (3rd semester)
Introduction to Aseptic area & room
Designing of Aseptic Room
Laminar Airflow Equipment
Sources of Contamination & Method of Prevention
Classification of Aseptic Area-Room
Testing of Clean Aseptic Room
Microbiology:
Microbiology is the study of microscopic organisms and their activities
It considers the microscopic forms of life and deals about their
Reproduction and physiology
participation in the process of nature
helpful and harmful relationship with other living things
significance in science and industry
Preservation of pharmaceutical products using antimicrobial agents. PHARMACEU...Ms. Pooja Bhandare
PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-VPart-3
Preservation of pharmaceutical products using antimicrobial agents.
Introduction. Ideal Properties of Preservatives:
Antimicrobial Chemical Preservatives
Development of a Preservative System.
Factors affecting efficacy of a preservative: 1. Interaction With components of the formulation
2. Properties of the Preservatives:
3) Effect of Containers.
4) Type of microbes:
5) Influence of pH:
Challenge Test: Efficacy Test of Preservative : Medium used, Choice of test organism:
Preparation of the inoculum:
Procedure:
Interpretation of Results:
Evaluation of Bactericidal and Bacteriostatic (Disinfectant). PHARMACEUTICAL ...Ms. Pooja Bhandare
PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-III Part-5 Evaluation of Bactericidal and Bacteriostatic (Disinfectant). The common methods used for evaluation of a disinfectant are as follows,
Tube Dilution Method.
Agar Plate Method.
Filter Paper & Cup Plate Method.
Ditch-Plate Method.
Phenol Coefficient Method.
The official phenol coefficient tests include,
Rideal-Walker Test (RW Test).
Chick-Martin Test.
United States FDA Test for Phenol Coefficient. (FDA Test)
The US Association of Official Agricultural Chemists Test (FDA Test)
A. Rideal-Walker Test:
Kelsey Sykes Method
PHARMACEUTICAL MICROBIOLOGY (BP303T) Unit-III Part-1 Study of morphology, cla...Ms. Pooja Bhandare
PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-IIIPart-1Study of morphology, classification, reproduction/replication and cultivation of fungi, Introduction fungi. Morphological Characteristics of fungi, CLASSIFICATION: Depending on cell morphology, fungi can be divided into 4 classes:
Moulds Yeasts ,Yeast like fungi and
Dimorphic fungi
Depending on their sexual spores formation fungi are divided into 4 classes:
Zygomycetes Ascomycetes
Basidiomycetes Dueteromycetes
Reproduction and sporulation;Vegetative, Asexual
and Sexual
Vegetative reproduction: Fragmentation ,Fission, budding, Sclerotia Rhizomorphs
Asexual reproduction: Zoospores
Sporangiospore, Conidia
Oidia Uredospores ,Basidiospores
Sexual reproduction:Planogametic copulation: Isogamy Heterogamy
Gametangial contact
Gametangial copulation Spermatization Somatogamy CULTIVATION OF FUNGI: Brain Heart Infusion (BHT) agar
Czapek’s agar
Mycobiotic agar Inhibitory mold agar (IMA)
Potato dextrose agar
Sabouraud’s dextrose agar (SDA):
Sabouraud’s heart infusion (SABHI) agar
Potato Flake agar
Potato dextrose-yeast extract agar (PDYA)
. Cornmeal agar
Malt extract agar (MEA)
Assessment of microbial contamination and spoilage. PHARMACEUTICAL MICROBIOLO...Ms. Pooja Bhandare
PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-VPart-2
Assessment of microbial contamination and spoilage.
Assessment of microbial contamination and spoilage
1. Physical and chemical changes:
2. Assessment of viable microorganisms in non-sterile products:
3. Sterility test:
4. Estimation of pyrogens:
Microbial Limit Tests:
Total Aerobic Microbial Count:
Membrane Filtration.
Plate Count Methods.
Pour Plate Method.
Surface spread Method.
Most Probable Number(MPN)
Designing of aseptic area, laminar flow equipment: Study of different source ...Ms. Pooja Bhandare
Designing of aseptic area, laminar flow equipment: Study of different source of contamination in aseptic area and methods of prevention, clean area classification. PHARMACEUTICALMICROBIOLOGY (BP303T)Unit-IVPart-1
Introduction: Designing of Aseptic Area . i) The clean-up area,
ii) The compounding area,
iii) The aseptic area,
iv) The quarantine area and
v) The packaging/labelling area.
Flow diagram of aseptic area. Floors, walls and ceilings, Doors, windows and services Personnel and protective clothing Cleaning and disinfection. Air Supply. Laminar flow equipment. Vertical laminar air flow bench
Horizontal laminar air flow bench
High Efficiency Particulate Air (HEPA) Filter. Operating Instructions Uses of Laminar Air Flow.Advantages of Laminar Air Flow.Limitations of Laminar Air Flow. Air flow pattern Unidirectional airflow
Non-unidirectional airflow
Combined airflow
Different Sources of Contamination in an Aseptic Area
1) Personnel:
2) Buildings and Facilities
3) Equipment and Utensils:
4) Raw Materials
5) Manufacturing Process:
Methods of Prevention of Contamination Clean Area Classification
VIRUS PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-IIIPart-2Study of morphology, ...Ms. Pooja Bhandare
PHARMACEUTICAL MICROBIOLOGY (BP303T)Unit-IIIPart-2Study of morphology, classification, reproduction/replication and cultivation of Virus. Introduction, Def General characteristics of Viruses: small size characteristic shapes, obligate intracellular parasites no built-in metabolic machinery no ribosomes
only one type of nucleic acid
do not grow in size. Morphology of Virus: Helical, Polyhedral (Icosahedral) Viral Envelop, Complex virus, Classification of virus. Viral Replication LIFE CYCLE OF BACTIRIOPHAGES Lytic cycle: Attachment, Penetration, Biosynthesis, Maturation and Release of progeny Phage Particles. The Lysogenic Cycle, Cultivation of virus : Animal inoculation, Embryonated eggs or chick embryo method and Tissue culture or cell culture: Organ cultures Explant culture and Cell culture. Types of cell culture
1.Primary cell culture: 2. Diploid cell culture (Semi-continuous cell lines):3. Heteroploid cultures (Continuous cell lines):
MULTIPLICATION OF HUMAN VIRUS:1. Attachment of Viral Particles 2. Penetration 3. Uncoating 4. Replication Of Viral Nucleic Acids And Translation Of The Genome 5) Maturation Or Assembly Of Virions. ) 6. Release Of Virions Into The Surrounding Environment
Aseptic Area and Microbial Control. - Pharmaceutical Microbiology (SYBpharm) ...Kiran Shinde
Prof.Mr.Kiran K. Shinde (M.Pharm), Assistant professor (VNIPRC)
Pharmaceutical microbiology (Second year b.pharm) (3rd semester)
Introduction to Aseptic area & room
Designing of Aseptic Room
Laminar Airflow Equipment
Sources of Contamination & Method of Prevention
Classification of Aseptic Area-Room
Testing of Clean Aseptic Room
Microbiology:
Microbiology is the study of microscopic organisms and their activities
It considers the microscopic forms of life and deals about their
Reproduction and physiology
participation in the process of nature
helpful and harmful relationship with other living things
significance in science and industry
Medical Microbiology begins with a review of the immune system, focusing on the body's response to invading microorganisms. Bacteria are then covered, first with a series of chapters presenting the general concepts of bacterial microbiology and then with chapters detailing the major bacterial pathogenes of humans. Similar sections cover virology, mycology, and parasitology. In each section, the introductory chapters stress the mechanisms of infection characteristic of that type of microorganism, thus providing the reader with a framework for understanding rather than memorizing the clinical behavior of the pathogens. The final section of the book Introduction to Infectious Diseases, is arranged by organ system and provides transition for clinical considerations.
Evolution of the Immune System
The immune system consists of factors that provide innate and acquired immunity, and has evolved to become more specific, complex, efficient, and regulated. One of the principal functions of the human immune system is to defend against infecting and other foreign agents by distinguishing self from non-self (foreign antigens) and to marshal other protective responses from leukocytes. The immune system, if dysregulated, can react to self antigens to cause autoimmune diseases or fail to defend against infections.
Organization/Components/Functions
The immune system is organized into discrete compartments to provide the milieu for the development and maintenance of effective immunity. Those two overlapping compartments: the lymphoid and reticuloendothelial systems (RES) house the principal immunologic cells, the leukocytes. Leukocytes derived from pluripotent stem cells in the bone marrow during postnatal life include neutrophils, eosinophils, basophils, monocytes and macrophages, natural killer (NK) cells, and T and B lymphocytes. Hematopoietic and lymphoid precursor cells are derived from pluripotent stem cells. Cells that are specifically committed to each type of leukocyte (colony-forming units) are consequently produced with the assistance of special stimulating factors (e.g. cytokines).
Cells of the immune system intercommunicate by ligand-receptor interactions between cells and/or via secreted molecules called cytokines. Cytokines produced by lymphocytes are termed lymphokines (i.e., interleukins and interferon-γ) and those produced by monocytes and macrophages are termed monokines.
Lymphoid System
Cells of the lymphoid system provide highly specific protection against foreign agents and also orchestrate the functions of other parts of the immune system by producing immunoregulatory cytokines. The lymphoid system is divided into 1) central lymphoid organs, the thymus and bone marrow, and 2) peripheral lymphoid organs, lymph nodes, the spleen, and mucosal and submucosal tissues of the alimentary and respiratory tracts. The thymus instructs certain lymphocytes to differentiate into thymus-dependent (T) lymphocytes and selects most of them to die in...
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
1. Mr. Krishnakant B. Bhelkar
Asst. Professor
Gurunanak College of Pharmacy, Nagpur
2. Inside…..
□ Definition
□ Brief introduction to various types of microorganisms
□ Branches of Microbiology, scope and its importance.
□ History of microbiology
□ Father of Microbiology
□ Spontaneous Generation Theory
□ Germ Theory f Disease
□ Glden Era of Microbiology
□ Contribution of Louis Pasteur, Robert Koch and Paul Ehrlich
□ Whittakers 5 Kingdom Concept
2
Bhelkar K. B. Gurunanak College of Pharmacy,
Nagpur
3. INTRODUCTION
□ It is the study of living organisms of microscopic size
which include bacteria, fungi, algae, protozoa and
viruses.
□ This term is introduced by a French chemist i.e. Louis
Pasteur
□ Micro-organisms can only be seen by magnifying their
image with microscope
3
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
5. INTRODUCTION: BACTERIA
□ Bacteria are small single-celled
organisms. Bacteria are found
almost everywhere on Earth and
are vital to the planet's
ecosystems. Some species can
live under extreme conditions of
temperature and pressure. The
human body is full of bacteria,
and in fact is estimated to
contain more bacterial cells than
human cells.
5
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
6. INTRODUCTION: VIRUS
□ A virus is
a submicroscopic infectious
agent that replicates only
inside the living cells of an
organism.
□ Viruses infect all types
of life forms, from animals
and plants to
microorganisms including
bacteria and archaea.
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
7. INTRODUCTION: FUNGI
□ A fungus (plural: fungi) is any member of the group
of eukaryotic organisms that includes microorganisms
such as yeasts and molds, as well as the more
familiar mushrooms.
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
8. INTRODUCTION: PROTOZOA
□ Protozoa (also protozoan, plural protozoans) is an
informal term for a group of single-celled eukaryotes,
either free-living or parasitic, which feed on organic
matter such as other microorganisms or organic tissues
and debris.
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
9. INTRODUCTION: ALGAE
□ Algae is an informal term for a large and diverse group
of photosynthetic eukaryotic organisms
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
10. BRANCHES OF MICROBIOLOGY
PURE SCIENCE
□ Bacteriology:-study of bacteria
□ Mycology :-study of fungi
□ Protozoalogy :-study of protozoa
□ Phycology/ Algology:- Study of algae
□ Virology: Study of Viruses
□ Nematology: Study of Nematodes such as roundworm or
threadworm
□ Parasitology:-study of parasites
□ Immunology : Study of mechanism in development of resistant
□ Microbial Cytology: Study of mcroscopic details of microorganisms
□ Microbial Ecology: Study of relationship between microorganisms
and their environment
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
11. BRANCHES OF MICROBIOLOGY
□ PURE SCIENCE (Continues)
□ Microbial Genetics: (Genetics: Study of variations and Hereditary)
□ Cellular Microbiology: Study of functions and properties of microbial
cells.
□ Evolutionary Microbiology: Study of the patterns (relationships
between genes and organisms) and processes (mechanisms
generating diversity and the selection operating on it) of evolution in
microbes.
□ Molecular Microbiology: Study of molecular mechanisms and
physiological processes of microbes and their utilization in
production of biotechnology products and medicines such as
vaccines, antibodies.
□ Phylogeny: Study of genetic relationship between different
microorganisms.
11
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
12. BRANCHES OF MICROBIOLOGY
□ APPLIED SCIENCE
□ Medical microbiology: Study of causative agents of infectious
disease.
□ Pharmaceutical microbiology: Study of Micro-microorganism which
is responsible for production of antibiotics, enzymes, vitamins,
vaccines and other pharmaceutical products.
□ Industrial microbiology: Study of Micro-organism which is
responsible for production of vitamins, amino acids, alcoholic
beverages .
□ Microbial Biotechnology: Biotechnology which involves the use of
microorganisms or their products.
□ Agricultural microbiology: Study of plant-associated microbes and
plant and animal diseases. It also deals with the microbiology of soil
fertility, such as microbial degradation of organic matter and soil
nutrient transformations.
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
13. BRANCHES OF MICROBIOLOGY
□ APPLIED SCIENCE (Continues)
□ Food Microbiology:
□ Aquatic microbiology: Study of micro-organism and their activities
into fresh and marine water
□ Air microbiology: Study which deal with role of aerosporain
contamination and spoilage of food and determination of plant and
animal through air
□ Epidemiology: Study which deal with consult with monitoring and
spread of disease in community
□ Veterinary Microbiology:
□ Biotechnology and Recombinent DNA Technology:
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
14. BRANCHES OF MICROBIOLOGY
□ APPLIED SCIENCE (Continues)
□ Environmental Microbiology:
□ Geomicrobiology: Study of role of microbes on geological
and geochemical processes and effects of minerals and
metals to microbial growth, activity and survival.
□ Microbial Diversity: Study of range of different kinds of
unicellular organisms, bacteria, archaea, protists, and fungi.
□ Bioremediation: Study f use of microorganisms to clean air,
water and soil
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
16. FATHER OF MICROBIOLOGY
□ Antony van Leeuwenhoek: -(1632-1720)
□ He was a first to observe & accurately to describe the shape of
human RBCs as well as little agent of disease i.e. animalcule’s.
□ He observed the motility of bacteria.
□ In 1683 he described different shapes or morphological forms of
bacteria.
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
17. FATHER OF MICROBIOLOGY
□ Antonie Van Leeuwenhoek (1632–1723) was one of the first people
to observe microorganisms, using a microscope of his own design,
and made one of the most important contributions to biology.
□ He had hobby of glass grinding and preparation of lenses and this
led him to assemble 250 single microscope.
□ He describe the inhibitory effect of acetic acid on Micro-organism
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
18. SPONTANEOUS GENERATION
THEORY
□ The belief of spontaneous generation:
Living organisms can originate from non-living sources.
e.g. Pieces of cheese and bread wrapped in rags and left in a dark
corner, for example, were thus thought to produce mice
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
20. SPONTANEOUS GENERATION
THEORY
□ Francesco Redi(1668)
□ Italian physician
□ Carried out a series of experiment on
decaying meat and its ability to produce
maggots spontaneously
20
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
21. SPONTANEOUS GENERATION
THEORY
□ Francesco Redi(1668)
□ Conclusion:
□ Generation of maggots resulted from the
presence of fly eggs,
□ Meat did not spontaneously generated
maggots as previously believed.
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
22. SPONTANEOUS GENERATION
THEORY
□ John Needham (1748)
□ English priest & botanist.
□ He concluded: organic matter contain vital
forces that could confer the properties of
life on non-living matter
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
23. SPONTANEOUS GENERATION
THEORY
□ Lazzaro Spallanzani(1769)
□ Italian priest
□ Improved Needham’s experiment
23
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
Spallanzani concluded:
Air carried germs to the culture medium,
External air might be required for the growth of animals already in the
medium.
24. SPONTANEOUS GENERATION
THEORY
□ critics
□ On Spallanzani experiment critics stated:
□ “Heating the air in sealed flask destroyed its ability to
support life”
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
25. SPONTANEOUS GENERATION
THEORY
□ Franz Schulze and Theoder Schwann worked for the theory
of Biogenesis.
□ H. Schroder and T. Von Dusch performed more convincing
experiment for the establishment of Theory of Biogenesis.
□ Though many of the scientists had worked for Spontaneous
generation and Biogenesis no convincing fact had been
established
25
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
27. SPONTANEOUS GENERATION
THEORY
□ Louis Pasteur
□ A French biologist, microbiologist
and chemist renowned for his
discoveries of the principles of
vaccination, microbial fermentation
and pasteurization.
□ In his famous experiment, he took a
Swan Neck Flask and boiled
nutrient rich broth inside it. He
pointed that no growth took place in
the flask as dust and germs had
been trapped on the walls of the
curved neck.
27
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
28. SPONTANEOUS GENERATION
THEORY
□ Louis Pasteur
□ Sterile liquid could be exposed only to the
□ Airbut no outside particles (dust or bacteria)
□ Could get past the curve in the flask’s neck
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
29. LOUIS PASTEUR
□ Contribution of Louis Pasteur
□ In 1897,he suggested that mild heating at 62.8°C (145°F) for 30
minutes rather than boiling was enough to destroy the
undesirable organisms without ruining the taste of product, the
process is called Pasteurization.
□ Coined the term ‘microbiology’.
□ Disproved the theory of spontaneous generation.
□ Demonstrated that anthrax was caused by bacteria and also
proved the vaccine for disease.
□ Developed live attenuated vaccine for the disease
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
30. GERM THEORY OF DISEASE
30
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
Girolamo
Fracastoro
(1478-1553)
Diseases might be due to invisible
organisms transmitted from ne
person to another person
Von Plenciz
1762
Different germs are responsible for
different diseases
Jonathan
Swift
1667-1745
‘Big bugs have little bugs
On their back to bit them
And little bugs have smaller one
And so ad infinitum’
Oliver
Wendell
Holmes
1809-1894
Puerperal fever transmitted from one
mother to another by midwives and
physician
Girolamo Fracastoro
Jonathan Swift
31. GERM THEORY OF DISEASE
□ Ignaz Semmelweis (1818-1865)
□ Ignaz Semmelweis was an obstetrician in the mid 1800’s who noted
a high mortality rate caused by puerperal fever in women giving birth
later in the day with the aid of doctors and medical students
compared to women who gave birth in the morning and with the aid
of midwives. Through his investigation, he noted that the doctors
and medical students helping women to give birth had come from
conducting autopsies. Semmelweis asserted that the puerperal fever
was caused by a disease spread to the pregnant women via the
cadavers in the autopsy rooms. Following this realization,
Semmelweis implemented mandatory handwashing in a
chlorinated solution of lime water prior to assisting with births, and
reduced the childbirth mortality rate from 18% to 2.2%.
Despite the success of mandatory hand washing,
Semmelweis’s theory was rejected by society during this time.
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
32. GERM THEORY OF DISEASE
□ Ignaz Semmelweis (1818-1865)
Pioneer of antiseptic procedures
He started use of antiseptics in
obstetrical practice
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
□ Joseph Lister (1827-1912)
Demonstrated importance of
antisepsis
33. GERM THEORY OF DISEASE
□ Louis Pasteur
Isolated parasite in pebrine (A silk
worm disease)
After that he concentrated on
cattles disease: Anthrax
33
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
□ Robert Koch (1843-1910)
Discovered bacteria from animals
suffering from Anthrax
Stated Koch’s Postulates
35. GERM THEORY OF DISEASE
□ Koch’s Postulates
A. A specific organism can be found in association with a
given disease
B. The organism can be isolated and grown in pure
culture in the laboratory
C. The pure culture will produce a disease when
inoculated into a susceptible animal
D. It is possible to recover the organism in pure culture
from experimentally infected animal
35
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
36. ROBERT KOCH
□ German physician and microbiologist
□ Received Nobel Prize in Physiology or Medicine in 1905
□ He identified the specific causative agents of tuberculosis,
cholera, and anthrax. Based on this he formulated Koch’s
postulates that is a series of four generalized principles linking
specific microorganisms to specific diseases that proved
influential on subsequent epidemiological principles.
□ Koch’s postulates helped a lot in identifying various infectious
organisms and related diseases.
□ He gave experimental support for the concept of infectious
disease
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
37. PAUL EHRLICH (1854-1915)
□ Known as Father of Chemotherapy
□ German medical scientist known for his pioneering work in
hematology, immunology, and chemotherapy and for his discovery of
the first effective treatment for syphilis.
□ Coined the term "magic bullet": for such chemicals that could bind to
and kill specific microbes or tumor cells.
□ Received Nobel Prize in Physiology and Medicine in 1908 for his
discovery of arsphenamine (Salvarsan). The scientist discovered the
compound that acted like an antibiotic by accident, while working on
finding a cure for Trypanosoma brucei.
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
38. THE GOLDEN AGE OF
MICROBIOLOGY
1857-1914
□ 1857 -Pasteur described fermentation.
□ 1861-Disproved spontaneous generation.
□ 1867-Lister publishes on antiseptic surgery.
□ 1876-Telephone
□ 1877-Koch‟s postulates. (germ theory)
□ 1879-Bulb
□ 1880-Laveran discovered Plasmodium (malaria)
□ 1881-Anthrax vaccine by Pasteur.
□ 1882-Koch discovered cause of TB.
□ 1884-Autoclave& Gram Stain.
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
39. THE GOLDEN AGE OF
MICROBIOLOGY
1857-1914
□ 1885-Rabies vaccine by Pasteur,
□ Escherich discovered E. coli
□ 1887-Richard Julius Petri
□ 1889-Beijerinickisolates root nodule bacteria & in1899-
proves virus causes tobacco mosaic disease.
□ 1903-Antibodies
□ 1911-Rous (Viruses can cause cancer)
□ 1915-17 -bacterial viruses by D‟Herelle& Twort
39
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
40. THE GOLDEN AGE OF
MICROBIOLOGY
1857-1914
□ 1923: 1st edition of David Bergey‟s Manual (used to classify
bacteria based on their structural and functional attributes)
□ 1928: Griffith‟s transformation
□ 1931: Photosynthetic bacteria
□ 1933: Ruska‟s electron microscope
□ 1953: DNA double helix
□ 1955: F factor plasmid (Jacod& Wollman)
□ 1961: lac-operon (Jacob & Monad)
□ 1970: Amber & Smith (RE)
□ 1977: Woese divided Procaryotes into Bacteria &
Archaea
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Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
41. WHITTAKER’S 5 KINGDOM CONCEPT
□ In Linnaeus' time a Two Kingdom system of classification
with Plantae and Animalia kingdoms was developed that
included all plants and animals respectively.
□ This system did not distinguish between the eukaryotes
and prokaryotes,
□ R.H. Whittaker (1969) proposed a Five Kingdom
Classification. The kingdoms defined by him were named
Monera, Protista, Fungi, Plantae and Animalia. The main
criteria for classification used by him include cell
structure, thallus organisation, mode of nutrition,
reproduction and phylogenetic relationships.
41
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
42. WHITTAKER’S 5 KINGDOM CONCEPT
42
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
43. WHITTAKER’S 5 KINGDOM CONCEPT
43
Bhelkar K. B.
Gurunanak College of Pharmacy, Nagpur
Characters Five Kingdoms
Monera Protista Fungi Plantae Animalia
Cell type Prokaryotic Eukaryotic Eukaryotic Eukaryotic Eukaryotic
Cell wall Noncellulosic
(Polysaccharid
e + amino acid)
Present in
some
Present
(without
cellulose)
Present
(cellulose)
Absent
Nuclear
membrane
Absent Present Present Present Present
Body
organisation
Cellular Cellular Multiceullar/
loose tissue
Tissue/ organ Tissue/organ/
organ system
Mode of
nutrition
Autotrophic
(chemosynthetic
and
photosynthetic)
and
Heterotrophic
(saprophytic/pa
rasitic)
Autotrophic
(Photosynthetic)
and Heterotrophic
Heterotrophic
(Saprophytic/
Parasitic)
Autotrophic
(Photosynthetic)
Heterotrophic
(Holozoic/
Saprophytic
etc.)