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Ocean Biogeographic Information
System
Ward Appeltans
UNESCO, Intergovernmental Oceanographic Commission (IOC-UNESCO)
International Oceanographic Data and Information Exchange (IODE)
Ocean Biogeographic Information System (OBIS)
Phlip Goldstein
University of Colorado at Boulder
OBIS-USA
 OBIS from Census of Marine Life to IODE
 OBIS Organization and Status
 OBIS Data, Access, and Participation
 Outcomes
 Global Relationships
 Your Role and OBIS’s Role in biodiversity:
How many species in the oceans?
OBIS: Biodiversity Data, Community,
Relationships, Outcomes
From Census of Marine Life …
OBIS was established as the data
repository and information
dissemination system for CoML
… to UNESCO-IOC/IODE/OBIS
"Knowledge of the oceans biodiversity is of
such importance to national and global
environmental issues that the responsibility
for OBIS’s continuing success should be
assumed by governments” IOC 2009
OBIS secretariat, database +
website moved from Rutgers
University (USA) to the IOC Project
Office for IODE in Oostende
(Belgium)
In June 2009, the 25th Session of the IOC Assembly decided
through Resolution XXV-4 to adopt OBIS as part of IODE
OBIS Nodes
(bold = NODC status, blue = thematic)
1. Antarctica / AntOBIS
2. Arctic / ArcOD/AOOS
3. Argentina / ArOBIS
4. Australia / OBIS-
Australia
5. Black Sea /
BlackSea-OBIS
6. Canada / OBIS-
Canada
7. China / OBIS-China
8. Europe / EurOBIS
MedOBIS
13.South-East Pacific /
ESPOBIS
14.South-West Atlantic /
WSAOBIS
15.South-West Pacific /
NZOBIS
16.Sub-Saharan /
AfrOBIS
17.USA/ OBIS-USA
18.Iran/ PEGO-OBIS
1. Global / MicrOBIS
2. Global / OBIS-
SEAMAP
3. Global / Hexacorals
1. MicrOBIS
2. OBIS-
SEAMAP
3. Hexacorals
4. FishBase
5. Seamounts
Regional / National …
Thematic
OBIS is the world’s largest open access,
online data system on the diversity,
distribution and abundance
of marine species
> 40 million
observations
115,000 marine
species
> 1,600 datasets
> 450 data providers
in 56 countries
www.iobis.org
OBIS Steering Group
OBIS trainings
Access, process, quality control, publish and use …
… marine biodiversity data
OBIS: Data Record of Biological Occurrences:
 Named Taxon, location, date/time
 The Standard: Ratified Darwin Core
 Circumstances of Observation
 Biological details
 Sampling method
 Environmental Conditions
 Administrative details:
 Institution and Individual Attribution
and Citation Requirements
What type of data is in OBIS?
Biological Occurrence Data
Occurrence data may
represent:
• Specimen / Historical
/ Literature
• Survey data / Human
Observation
• Machine
Observation FUTURE
 Web Site: www.iobis.org
 Web services and tools: OGC, IPT
 Query by dataset, taxon, location
 Access by association with physical/ chemical/
climate data
How do users access OBIS Data?
Association of observation points
with oceanography
Observation data associated with
 Bottom depth
 Temperature
 Salinity
 Nitrogen / Oxygen
 Phosphate / Silicate
Visualized through interactive graphs
 Time-series graphs
 Histograms
Climate variables from World Ocean Atlas
Association of observed species
with oceanography
Climate variables from World Ocean Atlas
Observation data associated with
 Bottom depth
 Temperature
 Salinity
 Nitrogen / Oxygen
 Phosphate / Silicate
Visualized through interactive graphs
 Time-series graphs
 Histograms
Species climate envelopes
Calanus finmarchicus
Species depth distribution
Calanus finmarchicus
 OBIS Nodes recruit and develop data and
metadata
 Program Office harvests data from nodes,
integrates into aggregate database
 Distributed system; Nodes control their data
 Nodes’ local community can be reflected in
their activities and outcomes
How Do Data Become Part of OBIS?
 Publications
 OBIS Analysis and Baseline Products
 OBIS / Synthesis Application Outcomes
OBIS Outcomes
OBIS Outcomes: Publication
More than 900 papers have cited OBIS,
growing at ~7 papers per month
100 times series
from OBIS
Number of sampling days per depth volume
99% of ocean volume is
still undersampled
Appeltans W., Dujardin F., Flavell M., Miloslavich P., Webb T. (2015). Biodiversity Baselines in the Global Ocean. In: Fischer A. et al (Eds).
Open Ocean Technical Assessment Report for the GEF Transboundary Water Assessment Programme (TWAP). UNEP, IOC-UNESCO. In
press.
OBIS Outcomes: Analysis & Baseline Products
Nr of records through time (latitude)
Global monitoring
since 1950
Progressively
increased in the
Southern
Hemisphere
Appeltans W., Dujardin F., Flavell M., Miloslavich P., Webb T. (2015). Biodiversity Baselines in the Global Ocean. In: Fischer A. et al (Eds).
Open Ocean Technical Assessment Report for the GEF Transboundary Water Assessment Programme (TWAP). UNEP, IOC-UNESCO. In
press.
OBIS Outcomes: Analysis & Baseline Products
Species richness indices
Hulbert index
Completeness based on Chao2
OBIS Outcomes: Analysis & Baseline Products
OBIS Outcomes: Analysis & Baseline Products
Appeltans W., Dujardin F., Flavell M., Miloslavich P., Webb T. (2015). Biodiversity Baselines in the Global Ocean. In: Fischer A. et al (Eds).
Open Ocean Technical Assessment Report for the GEF Transboundary Water Assessment Programme (TWAP). UNEP, IOC-UNESCO. In
press.
Two third of known species are uniques
Species richness indices
Hulbert index per MPA
Number of IUCN threatened species
OBIS Outcomes: Analysis & Baseline Products
Invasive species
Lionfish invasion in Caribbean (black before 1985, red after 1984)
OBIS Outcomes: Analysis & Baseline Products
OBIS Application
Outcomes
These density
models are used
to estimate
official “takes”
for marine
mammal
protection act
and endangered
species act
regulations in
the USA
OBIS-SEAMAP
Conservation
CBD-COP10 listed OBIS as a key source of information for the
identification of Ecologically or Biologically Significant Areas (EBSAs)
Areas of high
biodiversity
Areas of special
importance for the life
history of a species
Areas of significant
naturalness
Areas of unique-
ness or rarity
Area-based management
OBIS Application Outcomes
 Global Science Programs / Ocean Governance
 Requirements-Based
 Active Outreach
 Continuing Expansion
OBIS Relationships
OBIS Relationships
( only a partial view! )
GEO
GEO BON
• WG marine ecosystem change
• WG data integration and interoperability
 Scientific and data management community
 Historical data (setting baselines) and data from non
commercial, non-target fishery species
 Assessments of current knowledge, geographical and
taxonomic gaps
 Indicators of biodiversity, species richness and species
community composition (and changes through time)
 Open-access data portal, integrating biodiversity data with
climate variables (temperature, salinity, oxygen…)
 Capacity building (training)
OBIS Relationships
Contribution from OBIS to global programmes
One Planet – One Ocean
THANK YOU

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Introduction to OBIS at 2nd Int Ocean Research Conference 2014

  • 1. Ocean Biogeographic Information System Ward Appeltans UNESCO, Intergovernmental Oceanographic Commission (IOC-UNESCO) International Oceanographic Data and Information Exchange (IODE) Ocean Biogeographic Information System (OBIS) Phlip Goldstein University of Colorado at Boulder OBIS-USA
  • 2.  OBIS from Census of Marine Life to IODE  OBIS Organization and Status  OBIS Data, Access, and Participation  Outcomes  Global Relationships  Your Role and OBIS’s Role in biodiversity: How many species in the oceans? OBIS: Biodiversity Data, Community, Relationships, Outcomes
  • 3. From Census of Marine Life … OBIS was established as the data repository and information dissemination system for CoML
  • 4. … to UNESCO-IOC/IODE/OBIS "Knowledge of the oceans biodiversity is of such importance to national and global environmental issues that the responsibility for OBIS’s continuing success should be assumed by governments” IOC 2009 OBIS secretariat, database + website moved from Rutgers University (USA) to the IOC Project Office for IODE in Oostende (Belgium) In June 2009, the 25th Session of the IOC Assembly decided through Resolution XXV-4 to adopt OBIS as part of IODE
  • 5. OBIS Nodes (bold = NODC status, blue = thematic) 1. Antarctica / AntOBIS 2. Arctic / ArcOD/AOOS 3. Argentina / ArOBIS 4. Australia / OBIS- Australia 5. Black Sea / BlackSea-OBIS 6. Canada / OBIS- Canada 7. China / OBIS-China 8. Europe / EurOBIS MedOBIS 13.South-East Pacific / ESPOBIS 14.South-West Atlantic / WSAOBIS 15.South-West Pacific / NZOBIS 16.Sub-Saharan / AfrOBIS 17.USA/ OBIS-USA 18.Iran/ PEGO-OBIS 1. Global / MicrOBIS 2. Global / OBIS- SEAMAP 3. Global / Hexacorals 1. MicrOBIS 2. OBIS- SEAMAP 3. Hexacorals 4. FishBase 5. Seamounts Regional / National … Thematic
  • 6. OBIS is the world’s largest open access, online data system on the diversity, distribution and abundance of marine species > 40 million observations 115,000 marine species > 1,600 datasets > 450 data providers in 56 countries www.iobis.org
  • 8. OBIS trainings Access, process, quality control, publish and use … … marine biodiversity data
  • 9. OBIS: Data Record of Biological Occurrences:  Named Taxon, location, date/time  The Standard: Ratified Darwin Core  Circumstances of Observation  Biological details  Sampling method  Environmental Conditions  Administrative details:  Institution and Individual Attribution and Citation Requirements What type of data is in OBIS? Biological Occurrence Data Occurrence data may represent: • Specimen / Historical / Literature • Survey data / Human Observation • Machine Observation FUTURE
  • 10.  Web Site: www.iobis.org  Web services and tools: OGC, IPT  Query by dataset, taxon, location  Access by association with physical/ chemical/ climate data How do users access OBIS Data?
  • 11. Association of observation points with oceanography Observation data associated with  Bottom depth  Temperature  Salinity  Nitrogen / Oxygen  Phosphate / Silicate Visualized through interactive graphs  Time-series graphs  Histograms Climate variables from World Ocean Atlas
  • 12. Association of observed species with oceanography Climate variables from World Ocean Atlas Observation data associated with  Bottom depth  Temperature  Salinity  Nitrogen / Oxygen  Phosphate / Silicate Visualized through interactive graphs  Time-series graphs  Histograms
  • 15.  OBIS Nodes recruit and develop data and metadata  Program Office harvests data from nodes, integrates into aggregate database  Distributed system; Nodes control their data  Nodes’ local community can be reflected in their activities and outcomes How Do Data Become Part of OBIS?
  • 16.  Publications  OBIS Analysis and Baseline Products  OBIS / Synthesis Application Outcomes OBIS Outcomes
  • 17. OBIS Outcomes: Publication More than 900 papers have cited OBIS, growing at ~7 papers per month 100 times series from OBIS
  • 18. Number of sampling days per depth volume 99% of ocean volume is still undersampled Appeltans W., Dujardin F., Flavell M., Miloslavich P., Webb T. (2015). Biodiversity Baselines in the Global Ocean. In: Fischer A. et al (Eds). Open Ocean Technical Assessment Report for the GEF Transboundary Water Assessment Programme (TWAP). UNEP, IOC-UNESCO. In press. OBIS Outcomes: Analysis & Baseline Products
  • 19. Nr of records through time (latitude) Global monitoring since 1950 Progressively increased in the Southern Hemisphere Appeltans W., Dujardin F., Flavell M., Miloslavich P., Webb T. (2015). Biodiversity Baselines in the Global Ocean. In: Fischer A. et al (Eds). Open Ocean Technical Assessment Report for the GEF Transboundary Water Assessment Programme (TWAP). UNEP, IOC-UNESCO. In press. OBIS Outcomes: Analysis & Baseline Products
  • 20. Species richness indices Hulbert index Completeness based on Chao2 OBIS Outcomes: Analysis & Baseline Products
  • 21. OBIS Outcomes: Analysis & Baseline Products Appeltans W., Dujardin F., Flavell M., Miloslavich P., Webb T. (2015). Biodiversity Baselines in the Global Ocean. In: Fischer A. et al (Eds). Open Ocean Technical Assessment Report for the GEF Transboundary Water Assessment Programme (TWAP). UNEP, IOC-UNESCO. In press. Two third of known species are uniques
  • 22. Species richness indices Hulbert index per MPA Number of IUCN threatened species OBIS Outcomes: Analysis & Baseline Products
  • 23. Invasive species Lionfish invasion in Caribbean (black before 1985, red after 1984) OBIS Outcomes: Analysis & Baseline Products
  • 24. OBIS Application Outcomes These density models are used to estimate official “takes” for marine mammal protection act and endangered species act regulations in the USA OBIS-SEAMAP Conservation
  • 25. CBD-COP10 listed OBIS as a key source of information for the identification of Ecologically or Biologically Significant Areas (EBSAs) Areas of high biodiversity Areas of special importance for the life history of a species Areas of significant naturalness Areas of unique- ness or rarity Area-based management OBIS Application Outcomes
  • 26.  Global Science Programs / Ocean Governance  Requirements-Based  Active Outreach  Continuing Expansion OBIS Relationships
  • 27. OBIS Relationships ( only a partial view! )
  • 28. GEO GEO BON • WG marine ecosystem change • WG data integration and interoperability
  • 29.  Scientific and data management community  Historical data (setting baselines) and data from non commercial, non-target fishery species  Assessments of current knowledge, geographical and taxonomic gaps  Indicators of biodiversity, species richness and species community composition (and changes through time)  Open-access data portal, integrating biodiversity data with climate variables (temperature, salinity, oxygen…)  Capacity building (training) OBIS Relationships Contribution from OBIS to global programmes
  • 30. One Planet – One Ocean THANK YOU