LUMEN DWELLING FLAGELLATES - GIARDIA
REFS:
INTERNATIONALLY ACCEPTED BOOK OF MEDICAL PARASITOLOGY BY K. D. CHATTERJEE
TEXT BOOK OF MEDICAL PARASITOLOGY BY PANIKER
IMAGE SOURCES : FROM INTERNET
Entamoeba histolytica was first discovered by Losch in 1875.
It is worldwide distribution.
It is prevalent in tropical and subtropical countries where sanitary conditions are poor.
In india, it is prevalent in Chandigarh, Tamil Nadu & Maharashtra.
It is found in the colon of man.
It is monogenetic because the whole life cycle completed within a single host, i.e. man.
LUMEN DWELLING FLAGELLATES - GIARDIA
REFS:
INTERNATIONALLY ACCEPTED BOOK OF MEDICAL PARASITOLOGY BY K. D. CHATTERJEE
TEXT BOOK OF MEDICAL PARASITOLOGY BY PANIKER
IMAGE SOURCES : FROM INTERNET
Entamoeba histolytica was first discovered by Losch in 1875.
It is worldwide distribution.
It is prevalent in tropical and subtropical countries where sanitary conditions are poor.
In india, it is prevalent in Chandigarh, Tamil Nadu & Maharashtra.
It is found in the colon of man.
It is monogenetic because the whole life cycle completed within a single host, i.e. man.
Morphology, Life cycle, Clinical manifestations and laboratory diagnosis of E. histolytica from Clinical and Microbiological point of view for UG and PG Students.
Morphology, Life cycle, Clinical manifestations and laboratory diagnosis of E. histolytica from Clinical and Microbiological point of view for UG and PG Students.
Classification of medical parasitology Lec.2.pptxnedalalazzwy
Parasitology is the scientific discipline concerned with the study of the biology of parasites and parasitic diseases, including the distribution, biochemistry, physiology, molecular biology, ecology, evolution and clinical aspects of parasites, including the host response to these agents.
Virology is the scientific study of biological viruses. It is a subfield of microbiology that focuses on their detection, structure, classification and evolution, their methods of infection and exploitation of host cells for reproduction, their interaction with host organism physiology and immunity,
Amoebiasis is an infectious disease caused by Entamoeba histolytica (E. histolytica), the common symptoms are cramping, abdominal pain, watery or bloody diarrhea, and weight loss. Sometimes patients suffer amoebiasis as an asymptomatic behavior. In 1859 scientist W.D. Lambl first described the amoebiasis vector E. histolytica. In developing countries, millions of people die due to amoebiasis. A doctor diagnosed the disease detection of E. histolytic antigen in stool or antibodies against the parasite in serum. Metronidazole, tinidazole, lodoquinol, diloxanide furoate are given for amoebiasis patients. In this review, we have summarized the statistics, pathogenesis, diagnosis, prevention, and treatment strategy of amoebiasis disease. It also gives information about the life cycle of E. histolytica.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Comparing Evolved Extractive Text Summary Scores of Bidirectional Encoder Rep...University of Maribor
Slides from:
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Track: Artificial Intelligence
https://www.etran.rs/2024/en/home-english/
2. CONTENT
INTRODUCTION
DISEASE
GEOGRAPHICAL DISTRIBUTION
EPIDEMIOLOGY
MORPHOLOGY
LIFE CYCLE OF THE PARASITE
SYMPTOMS OF INFECTION
DIAGNOSIS
PREVENTION AND TREATMENT
REFERENCE
2
3. INTRODUCTION
Entamoeba histolytica is an anaerobic
unicellular parasitic protozoan, part of the
genus Entamoeba.
Predominantly infecting humans and other
primates causing amoebiasis, E. histolytica is
estimated to infect about 35-50 million people
worldwide.
Infection with E. histolytica maybe the cause of
a variety of symptoms, beginning from no
symptoms to severe fulminating intestinal
and/or life-threatening extraintestinal disease.
There are at least six species of the genus
Entamoeba that can be identified in human
stools. These are E. histolytica, E. dispar, E.
mshkoveskii, E. hartmanii, E. polecki, and E. coli.
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4. DISEASE
Entamoeba histolytica is the causative agent of
Amoebic dysentery or Amoebiasis.
Dysentery affects the intestines that results in
intense diarrhea with blood and is often
accompanied by pain and fever.
E. histolytica, as its name suggests (histo–lytic
= tissue destroying), is pathogenic.
Infection with E. histolytica may be;
- Asymptomatic (no symptoms)
- Intestinal Amoebiasis or
- Extraintestinal Amoebiasis
(Amoebic liver abscess).
4
5. GEOGRAPHICAL DISTRIBUTION
Pathogenic Entamoeba
species occur worldwide. The
majority of amoebiasis cases
occur in developing countries,
more common in areas or
countries with poor sanitation,
particularly in the tropics.
3rd most common parasitic
death - India, China, Africa,
South America - 2-60%
prevalence.
It varies depending on
sanitation and climate.
5
6. EPIDEMIOLOGY
Prevalence of infection with E. histolytica varies
greatly depending on region and
socioeconomic status. Amebiasis is endemic to
Africa, Latin America, India, and Southeast Asia.
It is estimated that infection with E. histolytica
leads to 50 million cases of symptomatic
disease and 40,000-110,000 deaths annually.
Amebiasis is the 3rd leading parasitic cause of
death worldwide. • Prospective studies have
shown that 4-10% of individuals infected with
E. histolytica develop amebic colitis and that
<1% of infected individuals develop
disseminated disease, including amebic liver
abscess.
6
7. MORPHOLOGY
There are two stages in the life form :
1. actively growing and feeding stage referred to
as the Trophozoite form.
2. transmission stage called the Cyst form
(a) Trophozoite – actively motile feeding stage.
(b) Cyst – resistant, infective stage.
(a) Trophozoite
vary in size from about 10-60μm in diameter.
The cell body is divisible into two distinct
portions—Ectoplasm and Endoplasm. The
ectoplasm is clear and translucent while the
7
8. MORPHOLOGY CONT.
the endoplasm is granular. The endoplasm
often contains ingested red blood corpuscles.
The pseudopodia may be long, finger-like or
rounded in shape. The nucleus is indistinct in
living condition but in stained preparation it
shows a central Karyosome or Endosome.
The nucleus is 4-6μm in diameter.
(b) Cyst
Cysts range in size from 10-20μm. The cysts
are spherical. The cyst wall is double and the
cytoplasm usually bears four nuclei
(quadrinucleate). The immature cyst has
inclusions namely; glycogen mass and
chromatid bars. As the cyst matures, the
glycogen completely disappears.
8
9. LIFE CYCLE OF PARASITE
Infection by Entamoeba histolytica
occurs by the ingestion of mature
quadrinucleate cysts in fecally
contaminated food, water, or hands.
The quadrinucleate cyst is resistant to
the gastric environment and passes
unaltered through the stomach.
When the cyst of E.histolytica reaches
caecum or lower part of ileum,
excystation occurs and an amoeba with
four nuclei emerges and that divides by
binary fission to form eight
trophozoites.
Trophozoites migrate to the large
intestine and lodge into the
submucosal tissue.
Trophozoites grow and multiply by
9
10. LIFE CYCLE CONT.
phase of the life cycle is responsible for
producing characteristics lesion of
amoebiasis).
Certain numbers of trophozoites are
discharged into the lumen of the bowel and
are transformed into cystic forms.
The cysts thus formed are unable to
develop in the same host and therefore
necessitate a transference to another
susceptible host. The cysts are passed in the
feces.
Because of the protection conferred by
their walls, the cysts can survive days to
weeks in the external environment. Cysts
are not highly resistant and are readily
killed by boiling. Trophozoites can also be
passed in diarrheal stools, but are rapidly
10
11. SYMPTOMS
Acute Intestinal Amoebiasis: dysentery (i.e.
bloody, mucus containing diarrhoea), lower
abdominal discomfort, flatulence.
Chronic amoebiasis: low-grade symptoms such
as occasional diarrhoea, weight loss, and
fatigue also occurs.
Amoebic abscess of the liver is characterized
by weight loss, fever, and a tender enlarged
liver and right upper quadrant pain.
Roughly 90% of infected individuals have
asymptomatic infection but they may be
carriers.
11
12. DIAGNOSIS
Microscopic examination of Stool samples:
Trophozoites may be seen in a fresh fecal
smear and cysts in an ordinary stool sample.
Serological Tests: useful for the diagnosis of
invasive amebiasis, detect anti-amoebic
antibodies in invasive amoebiasis, CIE, Gel
diffusion precipitation, Indirect
immunofluorescence.
Imaging MRI and ultra-sonography, CT scans
detect abscess in the liver.
Liver Aspiration Aspirations from the amoebic
liver abscess to detect trophozoites by wet
mount.
Detection of the nucleic acid of this protozoan
12
13. PREVENTION AND TREATMENT
PREVENTION
Filtration and boiling of drinking water as the
cyst is resistant to chlorination.
Education about the routes of transmission.
Avoid eating raw vegetables grown by
sewerage irrigation and night soil.
Proper disposal of sewage prevent
transmission Good personal hygiene.
Washing of fruits & vegetables before
consumption.
Protection of food from flies & cockroaches.
13
14. PREVENTION AND TREATMENT
TREATMENT
Intestinal infection: Usually nitroimidazole
derivatives are used because they are highly
effective against the trophozoite form of the
amoeba.
Liver abscess: metronidazole and chloroquine.
Along with agents which act on the lumen of
the intestine to prevent re-invasion.
Asymptomatic patients: For asymptomatic
patients, non endemic areas should be treated
by paromomycin. Other treatments include
diloxanide furoate and iodoquinol.
Paromomycin has a higher cure rate.
14
15. REFERENCE
A. B. Ryan KJ, Ray CG, eds. (2004). Sherris
Medical Microbiology (4th Ed.). McGraw Hill. pp.
733–8. ISBN 0-8385-8529-9.
"Amoebiasis" (PDF). Wkly. Epidemiol. Rec. 72
(14): 97–9. April 1997. PMID 9100475.
Ryan KJ, Ray CG, eds. (2004). Sherris Medical
Microbiology (4th ed.). McGraw Hill. pp. 733–8.
ISBN 978-0-8385-8529-0.
Blessmann J, Tannich E (October 2002).
"Treatment of asymptomatic intestinal Entamoeba
histolytica infection". The New England Journal of
Medicine. 347 (17): 1384.
doi:10.1056/NEJM200210243471722. PMID
12397207
15