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61ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013
Brewery-residue utilization of a freshly isolated A. niger sp. upt-03 for protease
production under solid-state fermentation
Salah Din Mahmud Hasan1
Citieli Giongo2
Sonia Aparecida Reis Lopes-Shikida3
Sérgio Luiz de Lucena4
Mônica Lady Fiorese5
Abstract: The operation parameters used in solid-state fermentation (SSF) support the growth of filamentous
fungi, which grow on solid substrates producing important metabolites such as proteases. The aim of this
work is to obtain fungal proteases by SSF using the residues of a local brewery industry (barley bagasse and
trub), that have high contents of proteins and soluble matter such as carbohydrates, vitamins, and mineral
salts. The methodology includes the preparation of residues, the screening of microorganisms, evaluation of
operational conditions for SSF using factorial design, purification and partial characterization of protease.
The results indicate that A. niger sp. UPT-03 isolated from the residue shows higher yields in terms of
enzyme production (0.36 U gdm-1
h-1
). The purification with DEAE-cellulose resulted in protease recovery
with 30-fold of purification with a specific activity of 550 U mg protein-1
. Higher proteolytic activity of
purified enzyme was obtained at pH 5.5 and 55 ºC.
Keywords: solid-state fermentation, brewery residues, fungi proteases, trub
INTRODUCTION
In recent years, there has been an increasing trend toward efficient utilization and value addition of
agro–industrial residues such as coffee pulp and husk, cassava husk, cassava bagasse, sugarcane bagasse,
sugar-beet pulp, apple pomace, and declassified potatoes. There are several recent publications describing
bioprocesses that have been developed utilizing these raw materials for the production of bulk chemicals and
value-added fine products, such as ethanol, single-cell proteins, mushrooms, enzymes, organic acids, amino
acids, and biologically active secondary metabolites. The application of agro–industrial residues in biopro-
cesses not only provides alternative substrates but also helps in solving pollution problems. Biotechnological
processes, especially the solid-state fermentation (SSF) technique, have contributed enormously for such
fruitful utilization (Singhania et al., 2010; Soccol & Vandenberghe, 2003).
Microbial proteases are among the most important hydrolytic enzymes and have been studied ex-
tensively. This group of enzymes represents one of the three largest groups of industrial enzymes and ac-
counts for approximately 60 % of the total enzyme sales in the world. They have numerous applications
in the industrial production of different items, viz. detergents, foods, pharmaceutical, leather, diagnostics,
1
	 Programa de Pós-graduação Stricto Sensu em Engenharia Química da Universidade Estadual do Oeste do Paraná – UNIOES-
TE. Rua da Faculdade, 645. Jardim Santa Maria. CEP 85903-000. E-mail: salahdmh@gmail.com
2
	 Programa de Pós-graduação Stricto Sensu em Engenharia Química da Universidade Estadual do Oeste do Paraná – UNIOES-
TE. Rua da Faculdade, 645. Jardim Santa Maria. CEP 85903-000. E-mail: citifarma@yahoo.com.br
3
	 Departamento de Biologia da Universidade Paranaense – UNIPAR, campus de Toledo/PR. Avenida Parigot de Souza, 3636.
Jardim Prada. CEP 85903-170. E-mail: perysonia@uol.com.br
4
	 Programa de Pós-graduação Stricto Sensu em Engenharia Química da Universidade Estadual do Oeste do Paraná – UNIOES-
TE. Rua da Faculdade, 645. Jardim Santa Maria. CEP 85903-000. E-mail: lucenasergio@yahoo.com.br
5
	 Programa de Pós-graduação Stricto Sensu em Engenharia Química da Universidade Estadual do Oeste do Paraná – UNIOES-
TE. Rua da Faculdade, 645. Jardim Santa Maria. CEP 85903-000. E-mail: mlfiorese@gmail.com
62 ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013
MATERIALS AND METHODS
MICROORGANISMS
Aspergillus niger (ATCC 16404), A. awa-
mori (NRRL 3112) and Trichoderma pseu-
dokoningii rifai were used in the present study.
Moreover, different fungal strains secreting pro-
tease were screened from the brewery residues,
including the fungus A. niger sp. UPT-03 and
UPT-13. The strains were maintained on potato-
-dextrose-agar slants and subcultured for growth
at 35 °C for 7 days. The spores obtained from a
fully sporulated slant were dispersed in 10 mL of
0.1 % Tween 80. The spore suspension was used
as inoculum, and the spore concentration was
estimated by direct microscopic counting using
a Neubauer cell. The final spore concentration
used for inoculation was 4 x 106
spores per g of
solid medium.
SSF PROCESS
The agro-residues, trub and barley bagas-
se, collected from a local brewery industry, were
dried at 50 °C for 3 days and processed using
standard sieve sets to obtain mean particle sizes
of 0.6–1.18 mm for trub and 1.18 mm for barley
bagasse. The barley bagasse, which shows larger
size, less protein (27 %), and large fiber content
(18 %), was used preferentially as support, for fa-
cilitating the easier diffusion of gases and quicker
release of heat formed during the fermentation
process. The residues were stored till further use.
Before fermentation, the residues were mixed in
the proportion of 70 % trub and 30 % barley
bagasse. In this case, the trub was considered as
the main substrate, because it has much higher
protein content (70 %) and an appropriate par-
ticle size. The mixture was then enriched with
a nutrient solution composed of 10 g K2
HPO4
;
1.6 g NaNO3
; 2.4 g urea; 0.6 g MgSO4
; 0.4 g
ZnSO4
; 0.4 g FeSO4
; 0.15 g MnSO4
; and 0.15
g CuSO4
, made up to 1 L with sterile water. The
final pH was adjusted with 0.5 N HCl and the
substrate was moistened with sterile water. The
substrate was dispensed in 250-mL Erlenmeyer
flasks and autoclaved at 121 ºC for 20 min. After
inoculation, the SSF process was carried out by
incubation at 32 °C.
including waste management and silver recovery
(Zambare et al., 2011). They hydrolyze peptide
bonds in aqueous environments and synthesize
peptide bonds in microaqueous environments.
Proteases are generally produced using the sub-
merged fermentation (SmF) process due to its
apparent advantages with respect to consistent
enzyme-production characteristics controlled by
defined medium-and-process conditions and ad-
vantages in downstream processing, in spite of
the cost intensiveness of the medium components
(Prakasham et al., 2006; Pandey et al., 2000). In
this context, SSF has gained renewed interest and
fresh attention from researchers owing to its im-
portance in the following developments: recent
progress in biomass-energy conservation, solid-
-waste treatment and its application for the pro-
duction of secondary metabolites.
Production of these biocatalysts using agro–
biotech substrates under SSF conditions provides
several advantages such as productivity, cost-effec-
tiveness with respect to labor, time, and medium
components, in addition to environmental ad-
vantages such as less effluent production and wa-
ste minimization (Mukherjee et al., 2008). There
are several reports describing the use of agro-in-
dustrial residues, such as soybean meal (Zambare
et al., 2011), pigeon pea (Johnvesly et al., 2002)
and wheat bran (Negi & Banerjee, 2009), for the
production of protease. However, these produc-
tion models would have to offer a competitive ad-
vantage over other existing procedures. In general,
each microbial strain is unique in its molecular,
biochemical, metabolic, and enzyme-production
properties. This necessitates a thorough characte-
rization of the isolated individual microbial spe-
cies to evaluate its potential at the commercial
level (Prakasham et al., 2006).
The solid residues from the brewery indus-
try, such as trub and barley bagasse, contain large
amounts of proteins and other soluble substances
including carbohydrates, vitamins, and salts. Due
to their physical, chemical, and biochemical cha-
racteristics, these residues have a great potential
for application in SSF processes, for the produc-
tion of high-priced bio-products such as protea-
ses. The present investigation aims to exploit the
locally available, inexpensive agro-substrates, trub
and barley bagasse, for fungal protease production
under SSF conditions.
63ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013
ANALYTICAL METHODS
The protease activity, PA, was measured
using the modified method described by Germa-
no et al. (2003). One unit of proteolytic enzyme
activity (U/gram of dried medium) was defined
as the amount of enzyme that produced an ab-
sorbance difference (in relation to control) during
1-h-incubation period at 45 °C for one gram of
fermented medium (based on dry weight). The
unit gdm indicates grams of dried medium. It
was used water instead the substrate at the con-
trol. The productivity, Y (U gdm-1
h-1
), was deter-
mined by dividing PA by the fermentation time.
Protein content, Prot (mg gdm-1
), was estimated
by Bradford method (1976), using bovine serum
albumin as the protein standard. Specific protease
activity, SPA (U/mg of protein), was determined
by dividing the PA value by the protein content.
Reducing sugars, RS (mg glucose gdm-1
), were
quantified by the method of Miller (1959). Mois-
ture content in dry basis, M (%), was determined
by the gravimetric method.
EXPERIMENTAL DESIGN
The fermenting parameters were evaluated
by the statistical design of experiments accor-
ding to a fractional factorial design of the type
25-2
(Montgomery, 1997). The influence of five
variables on the protease activity were evaluated
using eight experiments with two levels (-1 and
+1) for each factor and a trial of experiments for
the central point (level 0) for error estimation. In
this study, the five factors analyzed were: initial
moisture of fermenting medium (M), initial pH,
inoculum concentration (Co), mean diameter of
substrate particle (dp), and amount of peptone
addition (Pep), levels of which are shown in Table
1. Pep = 0 % (for level -1) implies that no pep-
tone was added, and this consideration does not
restrict further evaluation of the data. The results
obtained from the factorial design were subjected
to a first-order multiple-regression analysis using
the least squares regression methodology to ob-
tain the parameters of the response-surface equa-
tion and plots.
Table 1: Coded and assigned factors of different
levels of the 25-2
design.
Factor
Level
-1 0 +1
pH = initial pH 3.0 4.5 6.0
M = initial moisture of
fermenting medium (%)
40.0 55.0 70.0
Co = inoculum
concentration (spores g-1
)
4.105
4.106
4.107
dp = mean diameter of
substrate particle (mm)
0.748 0.844 0.940
Pep = initial peptone
concentration (%)
0.00 1.67 3.33
PEPTONE ADDITION
Batch and fed-batch systems were tested for
the addition of peptone, used as a protease indu-
cer in SSF of brewery residues by the fungus A.
niger sp. UPT-03. Both SSF processes were car-
ried out in 250-mL Erlenmeyer flasks at 32 °C.
Samples were collected after every 12-h period for
the characterization of the fungal growth curve.
For the fed-batch process, 1 % peptone was added
to the system every 12 h (Rao et al., 2006; Sanzo
et al., 2001; Bertolin et al., 2001).
ENZYME PURIFICATION
The protease enzyme was extracted by the
simple contact method of extraction, using dis-
tilled water as solvent (Chellappan et al., 2006;
Hasan et al., 2003). Ten volumes of distilled water
were added per gram of fermented medium (ba-
sed on dry weight), and enzyme extraction was
carried out by agitation at room temperature for 1
h. The suspension was filtered under vacuum, and
the filtrate was used as the crude enzyme extract.
Protease produced under SSF was partially
purified employing ammonium sulphate preci-
pitation, followed by dialyzis and ion-exchange
chromatography. Ammonium sulphate at a 70
% final concentration was used to precipita-
te the protease enzyme from the crude extract.
The precipitated protein was resuspended in 0.1
M phosphate buffer (pH 6), dialyzed against
0.01 M solution of the same buffer for 36 h, at
64 ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013
5 ºC, with six changes of buffer. Further an ion-
-exchange chromatography with DEAE cellulose
packing column was carried out. Dialyzed sample
was applied to DEAE-cellulose column that had
been pre-equilibrated with 0.01 M phosphate bu-
ffer pH 6. Elution was done at a flow rate of 120
ml.h-1
with 0.2 M NaCl in the same buffer and 5
ml fractions were collected. Peak fractions from
the column were assayed for protease activity and
protein content.
The molecular weight of active fractions
of protease collected after ion-exchange chroma-
tography was electrophoresed by reductive con-
ditions of SDS-PAGE in a 15 % polyacrylamide
gel according to Laemmlli (1970). Protein bands
were visualized by silver staining. Low molecular
weight markers was used as molecular mass stan-
dard and molecular weight of protease was esti-
mated.
PARTIAL CHARACTERIZATION
The pH for maximal protease activity was
determined with purified enzyme by checking the
enzyme activity in different buffer systems of pH
2–10 including, 0.2 M HCl–KCl (pH 2), 0.1 M
citrate (pH 3–6), 0.2 M phosphate (pH 7), Tris–
HCl (pH 8), glycine–NaOH (pH 9-10). The
temperature ranged from 30 to 70 ºC.
RESULTS AND DISCUSSION
FUNGI SCREENING
For the screening of microorganisms, five
Erlenmeyer flasks were prepared for SSF, and each
flask, including the initial sample (t = 0 h), was
removed after every 24 h, until the 96 h. Each
run was duplicated, totaling 10 samples. The yield
profiles of the protease obtained by SSF were eva-
luated for the five microorganisms tested in this
work. A higher yield was obtained for the fun-
gus A. niger UPT-03 after 24 h of fermentation
(Fig. 1). This fungus, which was isolated from the
trub residue and identified as A. niger sp. UPT-03
that produced the extracellular protease enzyme
within 24 h, was screened for subsequent studies.
Figure 1. Yield (Y) profiles of the protease obtained
by SSF for the five microorganisms.
The strain Trichoderma pseudoko-ningii rifai
had a smaller yield of protease until 24 h, but at
48 h it showed a higher value, together with the
fungus A. niger sp. UPT-03. The microorganis-
ms A. niger (ATCC 16404), A. awamori (NRRL
3112), Trichoderma pseudokoningii rifai, and
UPT-Trub-13 showed less visual proliferation and
virulence in the solid culture medium and had
smaller final yield values at 96 h. In this work,
fungal growth alone was investigated.
However, in many researches, during the
screening procedures for the microorganism,
some bacterial species were also observed to grow
in the substrates. Bacterial cultures, in general,
were considered nonsuitable for SSF due to their
greater water-activity requirement. However, bac-
terial cultures can be maintained and manipula-
ted for SSF processes (Mahanta et al., 2008; Pan-
dey, 2003).
KINETICS OF SSF PROCESS
The production of proteases is related to the
metabolic demands spanning many different as-
pects, including the type of fermentation (SSF or
SmF), substrate used, microorganism considered
(different species of bacteria or fungi), nutrients
added to the medium, and operating parameters
(pH, inoculum concentration, temperature, wa-
ter activity, fermentation time, etc.). The meta-
bolic changes occurring inside the fermentation
medium due to the growth of the microorganism,
substrate and nutrient consumption, respiration,
and metabolite production were evaluated. For
growth-curve calibration, five Erlenmeyer flasks
65ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013
were prepared for SSF, and each one, including
the initial sample (t=0h), was removed after every
24 h, until the 96 h. Each run was duplicated,
totaling 10 samples.
The curves obtained from the analysis of all
fermented samples are shown in Fig. 2. The profi-
les of reducing sugars (RS), moisture (M), prote-
ase activity (PA), specific protease activity (SPA),
and protein (Prot) during SSF were obtained for
the fungus A. niger sp. UPT-03. A comparison of
the protease activity (U gdm-1
) in Fig. 2 with the
yield values (U gdm-1
h-1
) in Fig. 1 with respect
to the time of incubation (h) showed a lag phase
between 0 and 24 h due to a small variation of RS,
M, PA, and Prot. After 24 h, RS decreased and PA
and M increased indicating a probable exponen-
tial phase of growth, evidenced by the increase of
protein content. After 48 h of culture, an increase
in the protein content occurred, probably mainly
due to the cellular mass increase, because an addi-
tional increase in protease production was not ob-
served (almost constant values of protease activity
and a decrease of SPA values).
After 72 h, the protein content decreased
indicating decay of the fungus, as evidenced by
the almost-constant final values of PA, RS, and
M. Hence, protease production could be achie-
ved, without yield prejudice, within 48 h of fer-
mentation of the fungus A. niger sp. UPT-03 on
trub and barley-bagasse substrates.
The increase in moisture content may be
due to the fact that no flux of air was added to the
medium during the SSF process, rendering mois-
ture control, release of gases, and heat dissipation
more difficult. In studies with Penicillium sp.,
some authors observed a peak in protease activity
after 3 days of incubation in wheat bran contai-
ning 50 % moisture.
Figure 2. Profiles of reducing sugars RS (mg glucose gdm-1
),
moisture (M, %), protease activity (PA, U gdm-1
), specific
protease activity (SPA, U mg protein-1
) and protein (Prot,
mg gdm-1
x100) obtained for SSF of the fungus A. niger sp.
UPT 03.
Other reports indicated the requirement of
55, 63, and 140 % initial moisture content for
maximum protease production by Penicillium
LPB-9 (Germano et al., 2003; Agrawal et al.,
2004), Aspergillus flavus IMI 327634 (Pandey,
2003), and Rhizopus oryzae (Tunga et al., 1998),
respectively.
A. niger was also shown to secrete maxi-
mum levels of alkaline and acid proteases after
2–3 days of incubation at 52–72 % moisture le-
vels (Mahanta et al., 2008), which supports the
present findings with A. niger sp. UPT-03.
Various agro–industrial residues have been
tested as substrates for protease production by
A. Oryzae, including spent brewing grain, whe-
at bran, rice husk, rice bran, coconut-oil cake,
palm-kernel cake, sesame-oil cake, jackfruit-seed
powder, and olive-oil cake. An almost two-fold
increase in enzyme activities was observed in whe-
at bran-based SSF medium (11.2 U gdm-1
) when
compared to the yield in the next most effective
substrate, coconut-oil cake (5.9 U gdm-1
).
Almost similar patterns were obtained in
the SmF process (Sandhya et al., 2005). It was
interesting to note that all the substrates tested
for SSF showed measurable enzyme production.
Working with spent brewing grain under SSF and
SmF, approximately 0.9 U gdm-1
and 4.8 U gdm-
1
of protease activity were obtained, respectively.
In the present work, approximately 12.5 U gdm-1
was obtained for trub and barley bagasse (used as
substrate for SSF) at the end of the same period
of incubation, which indicates a promising use for
this barley residue on a large scale.
Table 2 shows the coded factors and the re-
sults obtained for protease activity after 48 h of
fermentation during each experiment. Trub, used
as the substrate, was mixed with enough quantity
of barley bagasse to give the desired mean size of
the particles (dp), as specified in Table 1.
The protease activity varied markedly in the
range of 0.9–20 Ugdm-1
(Table 2). Runs 9 to 11
represents a triplicate at the central point of the
variables and is important for the error term cal-
culation, with a higher degree of freedom.
66 ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013
The results showed that higher protease ac-
tivities (20 U gdm-1
) were obtained for run 6 with
the following parameters: pH = 6.0; M = 40 %;
Co = 4 x 107
spores g-1
; dp = 0.748 mm, and Pep
= 0 %.
However, according to the Pareto chart of
effects (Fig. 3), only the following factors – pH,
mean diameter of substrate particle (dp), and
peptone concentration (Pep) – significantly in-
fluenced the protease activity results, with 95 %
confidence interval, as evidenced by the horizon-
tal bands extending beyond the dotted line.
Table 2. Matrix of fractional factorial design 25-2
,
with coded variables and results of PA obtained
for SSF of A. niger sp. UPT 03.
Run pH M Co dp Pep PA (U gdm-1
)
1 - 1 - 1 - 1 - 1 + 1 5.7
2 + 1 - 1 - 1 + 1 - 1 11.6
3 - 1 + 1 - 1 + 1 - 1 4.5
4 + 1 + 1 - 1 - 1 + 1 7.9
5 - 1 - 1 + 1 + 1 + 1 0.9
6 + 1 - 1 + 1 - 1 - 1 20.0
7 - 1 + 1 + 1 - 1 - 1 12.0
8 + 1 + 1 + 1 + 1 + 1 1.5
9 0 0 0 0 0 5.7
10 0 0 0 0 0 5.7
11 0 0 0 0 0 3.5
An exponential increase in the enzyme acti-
vity of Penicillium sp. with an increase in the size
of inoculum has already been observed (Agrawal
et al., 2004), and the optimum spore concentra-
tion required for obtaining maximum protease
activity from Rhizopus oryzae NRRL 21498 was
~2 x 103
spores g-1
wheat bran; moreover, a further
increase in the size of inoculum did not show in-
creased protease activity. However, in the case of
Penicillium sp., no such optimum inoculum size
could be observed up to a very high spore count
of 10 billion spores g-1
wheat bran (Tunga et al.,
1998). The negative values for the effects of dp
and Pep in this study indicate that PA tends to
increase for their lower values, whereas the posi-
tive effect of pH is indicated by the increase in
protease activity with pH increase.
These results are evidenced by the response
surfaces shown in Fig. 4. The lowest values of
protease activity were achieved when an acidic
medium was used (pH 3.0), indicating a neutral
nature of the protease. The differential sensitivity
of protease-producing fungal strains toward pH
was also pointed earlier (Agrawal et al., 2004).
Moreover, the larger mean diameters of substrate
particles (dp) proved to be prejudicial to the culti-
vation of the fungus. Particle size has a profound
effect on enzyme production.
Small particles have more surface area for
growth but reduced porosity, leading to a lower-
ing of both gas diffusion and heat transfer, whereas
the larger particles absorb less moisture, swell less,
and, by drying rapidly, support only a suboptimal
growth of fungi (Chellappan et al., 2006). Wheat-
bran particles of average size <425 μm enhanced
protease production and enzyme production was
considerably reduced with increasing particle size.
In addition, wheat bran, without sieving, sup-
ported the production of considerable levels of
enzyme and increased the specific activity.
Moreover, the addition of peptone (Pep),
used as a protease inducer, might compact the
solid medium because of its chemical and physical
constitution; thus, combined with the negative
effect of moisture increase, peptone might inhibit
fungal growth due to the negligible diffusion of
air and nutrients and, consequently, may result in
less enzyme production.
Earlier reports, however, indicated that
complex carbon and nitrogen sources were bet-
ter substrates for protease production than simple
sugars, such as glucose, which caused catabolic re-
pression (Rao et al., 2006). Conflicting reports are
available on the protease activity of fungi grown
on protein-supplemented wheat bran.
Aspergillus niger var. tieghem showed about
1.4-fold increase in acid protease activity in the
presence of casein and trader’s protein that were
added to wheat bran.
67ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013
Figure 3. Pareto chart of effects, 95 % of confidence inter-
val, obtained for the fractional factorial design 25-2
.
On the contrary, 6, 14, and 55 % reduction
in alkaline protease activity of Aspergillus flavus
IMI 327634 was recorded after supplementing
wheat bran with casein, traders’ protein, and gela-
tin, respectively; this result leads to the conclusion
that induction of protease activity by supplemen-
ting wheat bran with protein appears to be depen-
dent on the fungal strain used for the experiment
(Agrawal et al., 2005; Chakraborty et al., 2005).
Therefore, a parallel study was carried out
for establishing whether a fed-batch regime is ne-
cessary for peptone addition. Although the frac-
tional factorial design 25-2
caused some partial
confounding in the interpretation of the mean
effects and two-way interaction effects due to its
small resolution, it was possible to verify the in-
fluence of the main parameters on protease activi-
ty at 95 % confidence intervals.
The equation below represents the depen-
dence of the protease activity on the variables.
4.01.Pep3.39.dp2.24.pH7.18)PA(Ugdm 1
−−+=−
Figure 4. Response surface of PA (real values), affected by
Pep and pH (coded values), obtained for the fractional fac-
torial design 25-2
.
This linear regression was carried out to a
determination coefficient R2
=0.921, and it was
considered valid at 95 % confidence interval
through the analysis of variance (ANOVA) (Table
3), wherein FCALC
is higher than the FTAB
.
The result of the F-test indicated the fitness
and validated the use of the model in response-
-surface construction.
Table 3. ANOVA obtained for linear regression
of the factorial design
Variation
Source
Sum of
squares
Degrees of
freedom
Mean
squares
FCALC*
Model
regression
282.33 5 56.47 11.61
Residues 24.31 5 4.86
Total 306.64 10
* FTAB
(0.95, 5, 5) = 5.05
There is a growing acceptance among scien-
tists for the use of statistical experimental designs
in biotechnology. Many scientists have reported a
satisfactory optimization of protease production
from microbial sources using the statistical appro-
ach. The application of the statistical design for
screening and optimization of culture conditions
facilitates the quick identification of the impor-
tant factors in the process and characterization of
the interactions between them. Almost two-fold
enhancement in protease production was achie-
ved using the statistical design of experiments.
Subsequent designs of experiments, such as the
central composite rotary designs for the signifi-
cant factors–pH, mean diameter of substrate par-
ticle (dp), and peptone concentration (Pep)–will
prove to be helpful for a statistical optimization of
the process in terms of protease activity.
FED-BATCH PROCESS
When using discontinuous systems, nu-
trients are added right at the start of cultivation
and productivity might hence be impaired by
substrate repression. Fed-batch fermentation,
where all or some of the nutrients are added du-
ring the cultivation process, aims to avoid such re-
ductions in product yields (Bertolin et al., 2001;
Tunga et al;. 1998).
68 ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013
However, with respect to fed-batch SSF, not
much information is available in literature, which
poses hurdles in the investigation of scale-up stra-
tegies for such modes of cultivation (Lonsane et
al., 1992).
Several studies have shown peptone, casein,
soy protein, gelatin, and yeast extract as nitrogen
sources and as typical inducers of protease produc-
tion during submerged and SSF processes (Rao
et al., 2006; Mahanta et al., 2008; Chauhan &
Gupta, 2004; Joo & Chang, 2005). In the present
work, the effect of peptone on batch and fed-ba-
tch SSF for protease production was determined.
Figures 5 and 6 illustrate the kinetic beha-
vior of fungal growth in SSF carried out by batch
and fed-batch processes, respectively. Considering
the protein profile as an indirect estimation of
fungal biomass, the gradual addition of peptone
into the fed-batch system decreased the lag-phase
by almost 12 h. However, after 24 h of fed-batch
cultivation, a probable inhibition by the substrate
occurred, characterized by the lack of fungal gro-
wth (constant values of reducing sugars and pro-
tein content) and by the lower values of protease
activity.
As observed before, there was a negative in-
fluence of higher values of dp, Pep, and M over
PA, indicating a damage or destruction of the fa-
vorable substrate conditions for fungus growth,
probably due to material compacting, which was
visible at the final stages of the process.
In addition, the overall yield of protease was
reduced by 21.7 % in the fed-batch system. Better
results were obtained for the batch process of SSF,
with the unique addition of 0.53 % peptone to
the nutrient solution at t = 0 h.
In earlier studies, the production of prote-
ases under batch and fed-batch systems of SmF
for Bacillus sphaericus, an obligate alkalophile
that overproduces extracellular alkaline proteases,
the initial concentration of glucose and nitrogen
sources was shown to significantly affect the cell
growth and enzyme secretion.
Fed-batch cultures were conducted to ma-
ximize protease production in a bioreactor. By
using suitable feeding strategies, the protease acti-
vity and productivity in a fed-batch process were
increased by 44 % compared to that in a batch
process, primarily due to the longer maintenance
of increased rates of growth and enzyme produc-
tion by providing a continuous and controlled su-
pply of additional substrate and nutrients (Singh
et al., 2004).
This is the first study showing the effect of
peptone on protease synthesis during a fed-batch
SSF process. Complementary studies should be
designed to minimize the effect of homogeniza-
tion (shaking) in the fed-batch mode and thus
improve the advantages of SSF for producing bio-
active compounds.
Figure 5. Profiles of protease activity (PA, U gdm-1
), spe-
cific protease activity (SPA, U mg protein-1
), reducing su-
gars (RS, mg glucose gdm-1
), moisture (M, %) and protein
(Prot, mg gdm-1
x100) obtained for SSF of the fungus A.
niger sp. UPT 03 in batch system.
Figure 6. Profiles of protease activity (PA, U gdm-1
), speci-
fic protease activity (SPA, U mg protein-1
), reducing sugars
(RS, mg glucose gdm-1
), moisture (M, %), protein (Prot,
mg gdm-1
x100), obtained for SSF of the fungus A. niger sp.
UPT 03 in fed-batch system.
ENZYME PURIFICATION
The purification level of crude enzyme is
summarized in Table 4. The precipitate formed at
70 % saturation of ammonium sulphate, which
showed a 4.5-fold increase in specific activity com-
pared to the crude sample, was used for further pu-
69ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013
rification employing ion-exchange chromatogra-
phy. Elution at the DEAE-cellulose column gave a
peak with protease activity, which was eluted with
buffer containing 0.1M NaCl. This step resulted
in protease recovery with 30-fold purification with
specific activity of 550 U mg protein-1
.
SDS-PAGE under reducing conditions
yielded a single band (Fig. 7) with the molecular
mass of protease estimated by comparing the elec-
trophoretic mobility of marker protein, showing
that the homogeneous protease obtained has an
apparent molecular mass of 37 kDa.
EFFECT OF PH AND TEMPERATURE
Protease from A. niger UPT-03 was active in
the pH range 5–6, with an optimum pH of 5.5
(Fig. 8-a). Enzyme activity decreased under very
acidic and alkaline conditions, indicating slightly
acid characteristic. The enzyme was stable in the
temperature range 30–60 ºC with optimum tem-
perature for activity of 55 ºC (Fig. 8-b). More than
80 % of the activity was conserved between 35 and
55 ºC. The enzyme was stable at pH 5.5 and more
than 90 % activity was retained even after incuba-
tion (55 ºC) for 1h at pH between 5 and 6.
CONCLUSIONS
There is no general defined medium that
can be used for protease production by different
microbial strains. Every microorganism has its
own peculiar physicochemical and nutritional
requirements for protease production. In view of
the commercial utility of the enzyme, devising a
cost-effective medium formulation is a primary
concern. This study indicated the possibility of
producing fungal protease from an easily available
industry residue, namely the trub and the barley
bagasse derived from the brewery industry.
The fungus A. niger sp. UPT-03, a new
strain isolated from the trub residue, was appro-
priated for protease production. The main factors
affecting protease activity were found to be pH,
mean diameter of substrate particle, and peptone
concentration. Different levels of these param-
eters are proposed to be tested in a subsequent
optimization study of protease production. The
unique addition of 0.53 % peptone at the start
of the conventional batch process showed better
results of protease yield.
Figure 7. Reductive SDS-PAGE of purified sample conduc-
ted on 15 % polyacrylamide gel. Lane 1: molecular weight
marker (MW), lane 2: fraction after ion-exchange chroma-
tography. MW and purified sample were injected twice.
Table 4. Purification level
Sample
Protein
(mg
gdm-1
)
PA
(U
gdm-1
)
SPA
(U mg
protein-1
)
Fold of
purifi-
cation
Crude 0.65 12.0 18.5 1.0
Sam pre-
cipitation
0.12 10.0 83.3 4.5
DEAE-
cellulose
0.01 5.5 550.0 30
Figure 8-a. Activity at different pH: enzyme assay was con-
ducted in different buffer systems of pH 2–10 at 45 ºC.
70 ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013
Figure 8-b. Activity at different temperature: enzyme assay
was carried out at pH 5.5 at different temperatures.
ACKNOWLEDGMENT
The research was supported by Cnpq, Bra-
zil.
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Brewery engevista 2013

  • 1. 61ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013 Brewery-residue utilization of a freshly isolated A. niger sp. upt-03 for protease production under solid-state fermentation Salah Din Mahmud Hasan1 Citieli Giongo2 Sonia Aparecida Reis Lopes-Shikida3 Sérgio Luiz de Lucena4 Mônica Lady Fiorese5 Abstract: The operation parameters used in solid-state fermentation (SSF) support the growth of filamentous fungi, which grow on solid substrates producing important metabolites such as proteases. The aim of this work is to obtain fungal proteases by SSF using the residues of a local brewery industry (barley bagasse and trub), that have high contents of proteins and soluble matter such as carbohydrates, vitamins, and mineral salts. The methodology includes the preparation of residues, the screening of microorganisms, evaluation of operational conditions for SSF using factorial design, purification and partial characterization of protease. The results indicate that A. niger sp. UPT-03 isolated from the residue shows higher yields in terms of enzyme production (0.36 U gdm-1 h-1 ). The purification with DEAE-cellulose resulted in protease recovery with 30-fold of purification with a specific activity of 550 U mg protein-1 . Higher proteolytic activity of purified enzyme was obtained at pH 5.5 and 55 ºC. Keywords: solid-state fermentation, brewery residues, fungi proteases, trub INTRODUCTION In recent years, there has been an increasing trend toward efficient utilization and value addition of agro–industrial residues such as coffee pulp and husk, cassava husk, cassava bagasse, sugarcane bagasse, sugar-beet pulp, apple pomace, and declassified potatoes. There are several recent publications describing bioprocesses that have been developed utilizing these raw materials for the production of bulk chemicals and value-added fine products, such as ethanol, single-cell proteins, mushrooms, enzymes, organic acids, amino acids, and biologically active secondary metabolites. The application of agro–industrial residues in biopro- cesses not only provides alternative substrates but also helps in solving pollution problems. Biotechnological processes, especially the solid-state fermentation (SSF) technique, have contributed enormously for such fruitful utilization (Singhania et al., 2010; Soccol & Vandenberghe, 2003). Microbial proteases are among the most important hydrolytic enzymes and have been studied ex- tensively. This group of enzymes represents one of the three largest groups of industrial enzymes and ac- counts for approximately 60 % of the total enzyme sales in the world. They have numerous applications in the industrial production of different items, viz. detergents, foods, pharmaceutical, leather, diagnostics, 1 Programa de Pós-graduação Stricto Sensu em Engenharia Química da Universidade Estadual do Oeste do Paraná – UNIOES- TE. Rua da Faculdade, 645. Jardim Santa Maria. CEP 85903-000. E-mail: salahdmh@gmail.com 2 Programa de Pós-graduação Stricto Sensu em Engenharia Química da Universidade Estadual do Oeste do Paraná – UNIOES- TE. Rua da Faculdade, 645. Jardim Santa Maria. CEP 85903-000. E-mail: citifarma@yahoo.com.br 3 Departamento de Biologia da Universidade Paranaense – UNIPAR, campus de Toledo/PR. Avenida Parigot de Souza, 3636. Jardim Prada. CEP 85903-170. E-mail: perysonia@uol.com.br 4 Programa de Pós-graduação Stricto Sensu em Engenharia Química da Universidade Estadual do Oeste do Paraná – UNIOES- TE. Rua da Faculdade, 645. Jardim Santa Maria. CEP 85903-000. E-mail: lucenasergio@yahoo.com.br 5 Programa de Pós-graduação Stricto Sensu em Engenharia Química da Universidade Estadual do Oeste do Paraná – UNIOES- TE. Rua da Faculdade, 645. Jardim Santa Maria. CEP 85903-000. E-mail: mlfiorese@gmail.com
  • 2. 62 ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013 MATERIALS AND METHODS MICROORGANISMS Aspergillus niger (ATCC 16404), A. awa- mori (NRRL 3112) and Trichoderma pseu- dokoningii rifai were used in the present study. Moreover, different fungal strains secreting pro- tease were screened from the brewery residues, including the fungus A. niger sp. UPT-03 and UPT-13. The strains were maintained on potato- -dextrose-agar slants and subcultured for growth at 35 °C for 7 days. The spores obtained from a fully sporulated slant were dispersed in 10 mL of 0.1 % Tween 80. The spore suspension was used as inoculum, and the spore concentration was estimated by direct microscopic counting using a Neubauer cell. The final spore concentration used for inoculation was 4 x 106 spores per g of solid medium. SSF PROCESS The agro-residues, trub and barley bagas- se, collected from a local brewery industry, were dried at 50 °C for 3 days and processed using standard sieve sets to obtain mean particle sizes of 0.6–1.18 mm for trub and 1.18 mm for barley bagasse. The barley bagasse, which shows larger size, less protein (27 %), and large fiber content (18 %), was used preferentially as support, for fa- cilitating the easier diffusion of gases and quicker release of heat formed during the fermentation process. The residues were stored till further use. Before fermentation, the residues were mixed in the proportion of 70 % trub and 30 % barley bagasse. In this case, the trub was considered as the main substrate, because it has much higher protein content (70 %) and an appropriate par- ticle size. The mixture was then enriched with a nutrient solution composed of 10 g K2 HPO4 ; 1.6 g NaNO3 ; 2.4 g urea; 0.6 g MgSO4 ; 0.4 g ZnSO4 ; 0.4 g FeSO4 ; 0.15 g MnSO4 ; and 0.15 g CuSO4 , made up to 1 L with sterile water. The final pH was adjusted with 0.5 N HCl and the substrate was moistened with sterile water. The substrate was dispensed in 250-mL Erlenmeyer flasks and autoclaved at 121 ºC for 20 min. After inoculation, the SSF process was carried out by incubation at 32 °C. including waste management and silver recovery (Zambare et al., 2011). They hydrolyze peptide bonds in aqueous environments and synthesize peptide bonds in microaqueous environments. Proteases are generally produced using the sub- merged fermentation (SmF) process due to its apparent advantages with respect to consistent enzyme-production characteristics controlled by defined medium-and-process conditions and ad- vantages in downstream processing, in spite of the cost intensiveness of the medium components (Prakasham et al., 2006; Pandey et al., 2000). In this context, SSF has gained renewed interest and fresh attention from researchers owing to its im- portance in the following developments: recent progress in biomass-energy conservation, solid- -waste treatment and its application for the pro- duction of secondary metabolites. Production of these biocatalysts using agro– biotech substrates under SSF conditions provides several advantages such as productivity, cost-effec- tiveness with respect to labor, time, and medium components, in addition to environmental ad- vantages such as less effluent production and wa- ste minimization (Mukherjee et al., 2008). There are several reports describing the use of agro-in- dustrial residues, such as soybean meal (Zambare et al., 2011), pigeon pea (Johnvesly et al., 2002) and wheat bran (Negi & Banerjee, 2009), for the production of protease. However, these produc- tion models would have to offer a competitive ad- vantage over other existing procedures. In general, each microbial strain is unique in its molecular, biochemical, metabolic, and enzyme-production properties. This necessitates a thorough characte- rization of the isolated individual microbial spe- cies to evaluate its potential at the commercial level (Prakasham et al., 2006). The solid residues from the brewery indus- try, such as trub and barley bagasse, contain large amounts of proteins and other soluble substances including carbohydrates, vitamins, and salts. Due to their physical, chemical, and biochemical cha- racteristics, these residues have a great potential for application in SSF processes, for the produc- tion of high-priced bio-products such as protea- ses. The present investigation aims to exploit the locally available, inexpensive agro-substrates, trub and barley bagasse, for fungal protease production under SSF conditions.
  • 3. 63ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013 ANALYTICAL METHODS The protease activity, PA, was measured using the modified method described by Germa- no et al. (2003). One unit of proteolytic enzyme activity (U/gram of dried medium) was defined as the amount of enzyme that produced an ab- sorbance difference (in relation to control) during 1-h-incubation period at 45 °C for one gram of fermented medium (based on dry weight). The unit gdm indicates grams of dried medium. It was used water instead the substrate at the con- trol. The productivity, Y (U gdm-1 h-1 ), was deter- mined by dividing PA by the fermentation time. Protein content, Prot (mg gdm-1 ), was estimated by Bradford method (1976), using bovine serum albumin as the protein standard. Specific protease activity, SPA (U/mg of protein), was determined by dividing the PA value by the protein content. Reducing sugars, RS (mg glucose gdm-1 ), were quantified by the method of Miller (1959). Mois- ture content in dry basis, M (%), was determined by the gravimetric method. EXPERIMENTAL DESIGN The fermenting parameters were evaluated by the statistical design of experiments accor- ding to a fractional factorial design of the type 25-2 (Montgomery, 1997). The influence of five variables on the protease activity were evaluated using eight experiments with two levels (-1 and +1) for each factor and a trial of experiments for the central point (level 0) for error estimation. In this study, the five factors analyzed were: initial moisture of fermenting medium (M), initial pH, inoculum concentration (Co), mean diameter of substrate particle (dp), and amount of peptone addition (Pep), levels of which are shown in Table 1. Pep = 0 % (for level -1) implies that no pep- tone was added, and this consideration does not restrict further evaluation of the data. The results obtained from the factorial design were subjected to a first-order multiple-regression analysis using the least squares regression methodology to ob- tain the parameters of the response-surface equa- tion and plots. Table 1: Coded and assigned factors of different levels of the 25-2 design. Factor Level -1 0 +1 pH = initial pH 3.0 4.5 6.0 M = initial moisture of fermenting medium (%) 40.0 55.0 70.0 Co = inoculum concentration (spores g-1 ) 4.105 4.106 4.107 dp = mean diameter of substrate particle (mm) 0.748 0.844 0.940 Pep = initial peptone concentration (%) 0.00 1.67 3.33 PEPTONE ADDITION Batch and fed-batch systems were tested for the addition of peptone, used as a protease indu- cer in SSF of brewery residues by the fungus A. niger sp. UPT-03. Both SSF processes were car- ried out in 250-mL Erlenmeyer flasks at 32 °C. Samples were collected after every 12-h period for the characterization of the fungal growth curve. For the fed-batch process, 1 % peptone was added to the system every 12 h (Rao et al., 2006; Sanzo et al., 2001; Bertolin et al., 2001). ENZYME PURIFICATION The protease enzyme was extracted by the simple contact method of extraction, using dis- tilled water as solvent (Chellappan et al., 2006; Hasan et al., 2003). Ten volumes of distilled water were added per gram of fermented medium (ba- sed on dry weight), and enzyme extraction was carried out by agitation at room temperature for 1 h. The suspension was filtered under vacuum, and the filtrate was used as the crude enzyme extract. Protease produced under SSF was partially purified employing ammonium sulphate preci- pitation, followed by dialyzis and ion-exchange chromatography. Ammonium sulphate at a 70 % final concentration was used to precipita- te the protease enzyme from the crude extract. The precipitated protein was resuspended in 0.1 M phosphate buffer (pH 6), dialyzed against 0.01 M solution of the same buffer for 36 h, at
  • 4. 64 ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013 5 ºC, with six changes of buffer. Further an ion- -exchange chromatography with DEAE cellulose packing column was carried out. Dialyzed sample was applied to DEAE-cellulose column that had been pre-equilibrated with 0.01 M phosphate bu- ffer pH 6. Elution was done at a flow rate of 120 ml.h-1 with 0.2 M NaCl in the same buffer and 5 ml fractions were collected. Peak fractions from the column were assayed for protease activity and protein content. The molecular weight of active fractions of protease collected after ion-exchange chroma- tography was electrophoresed by reductive con- ditions of SDS-PAGE in a 15 % polyacrylamide gel according to Laemmlli (1970). Protein bands were visualized by silver staining. Low molecular weight markers was used as molecular mass stan- dard and molecular weight of protease was esti- mated. PARTIAL CHARACTERIZATION The pH for maximal protease activity was determined with purified enzyme by checking the enzyme activity in different buffer systems of pH 2–10 including, 0.2 M HCl–KCl (pH 2), 0.1 M citrate (pH 3–6), 0.2 M phosphate (pH 7), Tris– HCl (pH 8), glycine–NaOH (pH 9-10). The temperature ranged from 30 to 70 ºC. RESULTS AND DISCUSSION FUNGI SCREENING For the screening of microorganisms, five Erlenmeyer flasks were prepared for SSF, and each flask, including the initial sample (t = 0 h), was removed after every 24 h, until the 96 h. Each run was duplicated, totaling 10 samples. The yield profiles of the protease obtained by SSF were eva- luated for the five microorganisms tested in this work. A higher yield was obtained for the fun- gus A. niger UPT-03 after 24 h of fermentation (Fig. 1). This fungus, which was isolated from the trub residue and identified as A. niger sp. UPT-03 that produced the extracellular protease enzyme within 24 h, was screened for subsequent studies. Figure 1. Yield (Y) profiles of the protease obtained by SSF for the five microorganisms. The strain Trichoderma pseudoko-ningii rifai had a smaller yield of protease until 24 h, but at 48 h it showed a higher value, together with the fungus A. niger sp. UPT-03. The microorganis- ms A. niger (ATCC 16404), A. awamori (NRRL 3112), Trichoderma pseudokoningii rifai, and UPT-Trub-13 showed less visual proliferation and virulence in the solid culture medium and had smaller final yield values at 96 h. In this work, fungal growth alone was investigated. However, in many researches, during the screening procedures for the microorganism, some bacterial species were also observed to grow in the substrates. Bacterial cultures, in general, were considered nonsuitable for SSF due to their greater water-activity requirement. However, bac- terial cultures can be maintained and manipula- ted for SSF processes (Mahanta et al., 2008; Pan- dey, 2003). KINETICS OF SSF PROCESS The production of proteases is related to the metabolic demands spanning many different as- pects, including the type of fermentation (SSF or SmF), substrate used, microorganism considered (different species of bacteria or fungi), nutrients added to the medium, and operating parameters (pH, inoculum concentration, temperature, wa- ter activity, fermentation time, etc.). The meta- bolic changes occurring inside the fermentation medium due to the growth of the microorganism, substrate and nutrient consumption, respiration, and metabolite production were evaluated. For growth-curve calibration, five Erlenmeyer flasks
  • 5. 65ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013 were prepared for SSF, and each one, including the initial sample (t=0h), was removed after every 24 h, until the 96 h. Each run was duplicated, totaling 10 samples. The curves obtained from the analysis of all fermented samples are shown in Fig. 2. The profi- les of reducing sugars (RS), moisture (M), prote- ase activity (PA), specific protease activity (SPA), and protein (Prot) during SSF were obtained for the fungus A. niger sp. UPT-03. A comparison of the protease activity (U gdm-1 ) in Fig. 2 with the yield values (U gdm-1 h-1 ) in Fig. 1 with respect to the time of incubation (h) showed a lag phase between 0 and 24 h due to a small variation of RS, M, PA, and Prot. After 24 h, RS decreased and PA and M increased indicating a probable exponen- tial phase of growth, evidenced by the increase of protein content. After 48 h of culture, an increase in the protein content occurred, probably mainly due to the cellular mass increase, because an addi- tional increase in protease production was not ob- served (almost constant values of protease activity and a decrease of SPA values). After 72 h, the protein content decreased indicating decay of the fungus, as evidenced by the almost-constant final values of PA, RS, and M. Hence, protease production could be achie- ved, without yield prejudice, within 48 h of fer- mentation of the fungus A. niger sp. UPT-03 on trub and barley-bagasse substrates. The increase in moisture content may be due to the fact that no flux of air was added to the medium during the SSF process, rendering mois- ture control, release of gases, and heat dissipation more difficult. In studies with Penicillium sp., some authors observed a peak in protease activity after 3 days of incubation in wheat bran contai- ning 50 % moisture. Figure 2. Profiles of reducing sugars RS (mg glucose gdm-1 ), moisture (M, %), protease activity (PA, U gdm-1 ), specific protease activity (SPA, U mg protein-1 ) and protein (Prot, mg gdm-1 x100) obtained for SSF of the fungus A. niger sp. UPT 03. Other reports indicated the requirement of 55, 63, and 140 % initial moisture content for maximum protease production by Penicillium LPB-9 (Germano et al., 2003; Agrawal et al., 2004), Aspergillus flavus IMI 327634 (Pandey, 2003), and Rhizopus oryzae (Tunga et al., 1998), respectively. A. niger was also shown to secrete maxi- mum levels of alkaline and acid proteases after 2–3 days of incubation at 52–72 % moisture le- vels (Mahanta et al., 2008), which supports the present findings with A. niger sp. UPT-03. Various agro–industrial residues have been tested as substrates for protease production by A. Oryzae, including spent brewing grain, whe- at bran, rice husk, rice bran, coconut-oil cake, palm-kernel cake, sesame-oil cake, jackfruit-seed powder, and olive-oil cake. An almost two-fold increase in enzyme activities was observed in whe- at bran-based SSF medium (11.2 U gdm-1 ) when compared to the yield in the next most effective substrate, coconut-oil cake (5.9 U gdm-1 ). Almost similar patterns were obtained in the SmF process (Sandhya et al., 2005). It was interesting to note that all the substrates tested for SSF showed measurable enzyme production. Working with spent brewing grain under SSF and SmF, approximately 0.9 U gdm-1 and 4.8 U gdm- 1 of protease activity were obtained, respectively. In the present work, approximately 12.5 U gdm-1 was obtained for trub and barley bagasse (used as substrate for SSF) at the end of the same period of incubation, which indicates a promising use for this barley residue on a large scale. Table 2 shows the coded factors and the re- sults obtained for protease activity after 48 h of fermentation during each experiment. Trub, used as the substrate, was mixed with enough quantity of barley bagasse to give the desired mean size of the particles (dp), as specified in Table 1. The protease activity varied markedly in the range of 0.9–20 Ugdm-1 (Table 2). Runs 9 to 11 represents a triplicate at the central point of the variables and is important for the error term cal- culation, with a higher degree of freedom.
  • 6. 66 ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013 The results showed that higher protease ac- tivities (20 U gdm-1 ) were obtained for run 6 with the following parameters: pH = 6.0; M = 40 %; Co = 4 x 107 spores g-1 ; dp = 0.748 mm, and Pep = 0 %. However, according to the Pareto chart of effects (Fig. 3), only the following factors – pH, mean diameter of substrate particle (dp), and peptone concentration (Pep) – significantly in- fluenced the protease activity results, with 95 % confidence interval, as evidenced by the horizon- tal bands extending beyond the dotted line. Table 2. Matrix of fractional factorial design 25-2 , with coded variables and results of PA obtained for SSF of A. niger sp. UPT 03. Run pH M Co dp Pep PA (U gdm-1 ) 1 - 1 - 1 - 1 - 1 + 1 5.7 2 + 1 - 1 - 1 + 1 - 1 11.6 3 - 1 + 1 - 1 + 1 - 1 4.5 4 + 1 + 1 - 1 - 1 + 1 7.9 5 - 1 - 1 + 1 + 1 + 1 0.9 6 + 1 - 1 + 1 - 1 - 1 20.0 7 - 1 + 1 + 1 - 1 - 1 12.0 8 + 1 + 1 + 1 + 1 + 1 1.5 9 0 0 0 0 0 5.7 10 0 0 0 0 0 5.7 11 0 0 0 0 0 3.5 An exponential increase in the enzyme acti- vity of Penicillium sp. with an increase in the size of inoculum has already been observed (Agrawal et al., 2004), and the optimum spore concentra- tion required for obtaining maximum protease activity from Rhizopus oryzae NRRL 21498 was ~2 x 103 spores g-1 wheat bran; moreover, a further increase in the size of inoculum did not show in- creased protease activity. However, in the case of Penicillium sp., no such optimum inoculum size could be observed up to a very high spore count of 10 billion spores g-1 wheat bran (Tunga et al., 1998). The negative values for the effects of dp and Pep in this study indicate that PA tends to increase for their lower values, whereas the posi- tive effect of pH is indicated by the increase in protease activity with pH increase. These results are evidenced by the response surfaces shown in Fig. 4. The lowest values of protease activity were achieved when an acidic medium was used (pH 3.0), indicating a neutral nature of the protease. The differential sensitivity of protease-producing fungal strains toward pH was also pointed earlier (Agrawal et al., 2004). Moreover, the larger mean diameters of substrate particles (dp) proved to be prejudicial to the culti- vation of the fungus. Particle size has a profound effect on enzyme production. Small particles have more surface area for growth but reduced porosity, leading to a lower- ing of both gas diffusion and heat transfer, whereas the larger particles absorb less moisture, swell less, and, by drying rapidly, support only a suboptimal growth of fungi (Chellappan et al., 2006). Wheat- bran particles of average size <425 μm enhanced protease production and enzyme production was considerably reduced with increasing particle size. In addition, wheat bran, without sieving, sup- ported the production of considerable levels of enzyme and increased the specific activity. Moreover, the addition of peptone (Pep), used as a protease inducer, might compact the solid medium because of its chemical and physical constitution; thus, combined with the negative effect of moisture increase, peptone might inhibit fungal growth due to the negligible diffusion of air and nutrients and, consequently, may result in less enzyme production. Earlier reports, however, indicated that complex carbon and nitrogen sources were bet- ter substrates for protease production than simple sugars, such as glucose, which caused catabolic re- pression (Rao et al., 2006). Conflicting reports are available on the protease activity of fungi grown on protein-supplemented wheat bran. Aspergillus niger var. tieghem showed about 1.4-fold increase in acid protease activity in the presence of casein and trader’s protein that were added to wheat bran.
  • 7. 67ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013 Figure 3. Pareto chart of effects, 95 % of confidence inter- val, obtained for the fractional factorial design 25-2 . On the contrary, 6, 14, and 55 % reduction in alkaline protease activity of Aspergillus flavus IMI 327634 was recorded after supplementing wheat bran with casein, traders’ protein, and gela- tin, respectively; this result leads to the conclusion that induction of protease activity by supplemen- ting wheat bran with protein appears to be depen- dent on the fungal strain used for the experiment (Agrawal et al., 2005; Chakraborty et al., 2005). Therefore, a parallel study was carried out for establishing whether a fed-batch regime is ne- cessary for peptone addition. Although the frac- tional factorial design 25-2 caused some partial confounding in the interpretation of the mean effects and two-way interaction effects due to its small resolution, it was possible to verify the in- fluence of the main parameters on protease activi- ty at 95 % confidence intervals. The equation below represents the depen- dence of the protease activity on the variables. 4.01.Pep3.39.dp2.24.pH7.18)PA(Ugdm 1 −−+=− Figure 4. Response surface of PA (real values), affected by Pep and pH (coded values), obtained for the fractional fac- torial design 25-2 . This linear regression was carried out to a determination coefficient R2 =0.921, and it was considered valid at 95 % confidence interval through the analysis of variance (ANOVA) (Table 3), wherein FCALC is higher than the FTAB . The result of the F-test indicated the fitness and validated the use of the model in response- -surface construction. Table 3. ANOVA obtained for linear regression of the factorial design Variation Source Sum of squares Degrees of freedom Mean squares FCALC* Model regression 282.33 5 56.47 11.61 Residues 24.31 5 4.86 Total 306.64 10 * FTAB (0.95, 5, 5) = 5.05 There is a growing acceptance among scien- tists for the use of statistical experimental designs in biotechnology. Many scientists have reported a satisfactory optimization of protease production from microbial sources using the statistical appro- ach. The application of the statistical design for screening and optimization of culture conditions facilitates the quick identification of the impor- tant factors in the process and characterization of the interactions between them. Almost two-fold enhancement in protease production was achie- ved using the statistical design of experiments. Subsequent designs of experiments, such as the central composite rotary designs for the signifi- cant factors–pH, mean diameter of substrate par- ticle (dp), and peptone concentration (Pep)–will prove to be helpful for a statistical optimization of the process in terms of protease activity. FED-BATCH PROCESS When using discontinuous systems, nu- trients are added right at the start of cultivation and productivity might hence be impaired by substrate repression. Fed-batch fermentation, where all or some of the nutrients are added du- ring the cultivation process, aims to avoid such re- ductions in product yields (Bertolin et al., 2001; Tunga et al;. 1998).
  • 8. 68 ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013 However, with respect to fed-batch SSF, not much information is available in literature, which poses hurdles in the investigation of scale-up stra- tegies for such modes of cultivation (Lonsane et al., 1992). Several studies have shown peptone, casein, soy protein, gelatin, and yeast extract as nitrogen sources and as typical inducers of protease produc- tion during submerged and SSF processes (Rao et al., 2006; Mahanta et al., 2008; Chauhan & Gupta, 2004; Joo & Chang, 2005). In the present work, the effect of peptone on batch and fed-ba- tch SSF for protease production was determined. Figures 5 and 6 illustrate the kinetic beha- vior of fungal growth in SSF carried out by batch and fed-batch processes, respectively. Considering the protein profile as an indirect estimation of fungal biomass, the gradual addition of peptone into the fed-batch system decreased the lag-phase by almost 12 h. However, after 24 h of fed-batch cultivation, a probable inhibition by the substrate occurred, characterized by the lack of fungal gro- wth (constant values of reducing sugars and pro- tein content) and by the lower values of protease activity. As observed before, there was a negative in- fluence of higher values of dp, Pep, and M over PA, indicating a damage or destruction of the fa- vorable substrate conditions for fungus growth, probably due to material compacting, which was visible at the final stages of the process. In addition, the overall yield of protease was reduced by 21.7 % in the fed-batch system. Better results were obtained for the batch process of SSF, with the unique addition of 0.53 % peptone to the nutrient solution at t = 0 h. In earlier studies, the production of prote- ases under batch and fed-batch systems of SmF for Bacillus sphaericus, an obligate alkalophile that overproduces extracellular alkaline proteases, the initial concentration of glucose and nitrogen sources was shown to significantly affect the cell growth and enzyme secretion. Fed-batch cultures were conducted to ma- ximize protease production in a bioreactor. By using suitable feeding strategies, the protease acti- vity and productivity in a fed-batch process were increased by 44 % compared to that in a batch process, primarily due to the longer maintenance of increased rates of growth and enzyme produc- tion by providing a continuous and controlled su- pply of additional substrate and nutrients (Singh et al., 2004). This is the first study showing the effect of peptone on protease synthesis during a fed-batch SSF process. Complementary studies should be designed to minimize the effect of homogeniza- tion (shaking) in the fed-batch mode and thus improve the advantages of SSF for producing bio- active compounds. Figure 5. Profiles of protease activity (PA, U gdm-1 ), spe- cific protease activity (SPA, U mg protein-1 ), reducing su- gars (RS, mg glucose gdm-1 ), moisture (M, %) and protein (Prot, mg gdm-1 x100) obtained for SSF of the fungus A. niger sp. UPT 03 in batch system. Figure 6. Profiles of protease activity (PA, U gdm-1 ), speci- fic protease activity (SPA, U mg protein-1 ), reducing sugars (RS, mg glucose gdm-1 ), moisture (M, %), protein (Prot, mg gdm-1 x100), obtained for SSF of the fungus A. niger sp. UPT 03 in fed-batch system. ENZYME PURIFICATION The purification level of crude enzyme is summarized in Table 4. The precipitate formed at 70 % saturation of ammonium sulphate, which showed a 4.5-fold increase in specific activity com- pared to the crude sample, was used for further pu-
  • 9. 69ENGEVISTA, V. 15, n. 1. p. 61-71, abril 2013 rification employing ion-exchange chromatogra- phy. Elution at the DEAE-cellulose column gave a peak with protease activity, which was eluted with buffer containing 0.1M NaCl. This step resulted in protease recovery with 30-fold purification with specific activity of 550 U mg protein-1 . SDS-PAGE under reducing conditions yielded a single band (Fig. 7) with the molecular mass of protease estimated by comparing the elec- trophoretic mobility of marker protein, showing that the homogeneous protease obtained has an apparent molecular mass of 37 kDa. EFFECT OF PH AND TEMPERATURE Protease from A. niger UPT-03 was active in the pH range 5–6, with an optimum pH of 5.5 (Fig. 8-a). Enzyme activity decreased under very acidic and alkaline conditions, indicating slightly acid characteristic. The enzyme was stable in the temperature range 30–60 ºC with optimum tem- perature for activity of 55 ºC (Fig. 8-b). More than 80 % of the activity was conserved between 35 and 55 ºC. The enzyme was stable at pH 5.5 and more than 90 % activity was retained even after incuba- tion (55 ºC) for 1h at pH between 5 and 6. CONCLUSIONS There is no general defined medium that can be used for protease production by different microbial strains. Every microorganism has its own peculiar physicochemical and nutritional requirements for protease production. In view of the commercial utility of the enzyme, devising a cost-effective medium formulation is a primary concern. This study indicated the possibility of producing fungal protease from an easily available industry residue, namely the trub and the barley bagasse derived from the brewery industry. The fungus A. niger sp. UPT-03, a new strain isolated from the trub residue, was appro- priated for protease production. The main factors affecting protease activity were found to be pH, mean diameter of substrate particle, and peptone concentration. Different levels of these param- eters are proposed to be tested in a subsequent optimization study of protease production. The unique addition of 0.53 % peptone at the start of the conventional batch process showed better results of protease yield. Figure 7. Reductive SDS-PAGE of purified sample conduc- ted on 15 % polyacrylamide gel. Lane 1: molecular weight marker (MW), lane 2: fraction after ion-exchange chroma- tography. MW and purified sample were injected twice. Table 4. Purification level Sample Protein (mg gdm-1 ) PA (U gdm-1 ) SPA (U mg protein-1 ) Fold of purifi- cation Crude 0.65 12.0 18.5 1.0 Sam pre- cipitation 0.12 10.0 83.3 4.5 DEAE- cellulose 0.01 5.5 550.0 30 Figure 8-a. Activity at different pH: enzyme assay was con- ducted in different buffer systems of pH 2–10 at 45 ºC.
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