Bioschemas - TeSS Integration @ Rothamsted Hackathon 2016
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Presentation given by Niall Beard in November 2016 at Rothamsted research centre. The presentation is a use case overview of bioschemas (schema.org for science) and how it can be used to structure data included in aggregated registries. The registry is TeSS (https://tess.elixir-uk.org) which collects training events and materials from a distributed heterogeneous collection of sources
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Bioschemas for Aggregating ELIXIR Events - Comms Webinar
Bioschemas for Aggregating ELIXIR Events - Comms Webinar
DrupalSouth 2015 - Performance: Not an Afterthought
DrupalSouth 2015 - Performance: Not an Afterthought
Drupal as a Rapid Application Development (RAD) Framework for Startups
Drupal as a Rapid Application Development (RAD) Framework for Startups
Drupal as a Rapid Application Development Framework for Non Profits / NGOs
Drupal as a Rapid Application Development Framework for Non Profits / NGOs
SPSDenver - Wrapping Your Head Around the SharePoint Beast
SPSDenver - Wrapping Your Head Around the SharePoint Beast
Building Data Portals and Science Gateways with Globus
Building Data Portals and Science Gateways with Globus
More from Niall Beard
Concept Maps in TeSS
The ELIXIR Implementation study TeSS yielded a Javascript application called Concept Maps. The idea is to abstract the typical steps taken in a data analysis workflow into EDAM Operation and Data nodes, and connect these abstract steps with narrative text, available tools, and training resources.
Bioschemas Adoption Meeting: Training materials and Events
Presentation about Training materials and events specifications at the Bioschemas Adoption Meeting on 2nd October 2017. Presentation given by Niall Beard. Shows the aggregation use case of Bioschemas - showing adoption of the schema.org and a new tool for importing schema.org annotations
TeSS @ ISMB/ECCB 2017, Prague
This presentation describes TeSS, the motivations behind it, some of it's many features and looks at some of the ongoing and future developments and activities we're working towards. Additionally there are some slides on Bioschemas at the end
schema.org - Simple Structured Data for the Web
Bioschemas lightning talk for Collaborations Workshop 2017 in Leeds. Find out about how to take advantage of lightweight schema.org markup to enhance the discoverability of your web data through search engines and by aggregators
TeSS ELIXIR All Hands Rome 2017
This presentation shows you what you can do with TeSS to find training resource, both events and materials. This could be for someone looking for training resources to learn new skills, or trainers to find materials to build on for delivering their own courses.
It then talks about how you can integrate TeSS content into your own websites using several plugins, APIs, and links.
And finally, how do you get your own materials and events registered in TeSS
ELIXIR TeSS And Bioschemas: An aggregated portal and an aggregation tool
Webinar by Niall Beard about the aggregated training platform TeSS, and the schema.org working group Bioschemas. The presentation describes the need for TeSS, many of it's features and a look into the difficulties aggregating ANY data online. We go on to the solution of using schema.org as a lightweight method for structuring data. This talk was for the FAIRDOM webinar series. A live recording of it can be found here>
TeSS: ELIXIR Training Portal (Eubic Winter School 2017)
EuBiC Proteomics winter school. Presentation about ELIXIR training platform and the TeSS training portal for the Training Workflows workshop given on Monday 10th Jan 2017
TeSS trcg meeting nov16
Tess training coordinators meeting. New features including iAnn handover, event subscriptions and curation tools. Plus discussion into how to curate content in TeSS
Bioschemas presentation at ECCB 2016, The Hague
Bioschemas is an open community initiative that aims to improve data interoperability in the life sciences. It does so by encouraging life scientists to use schema.org mark-up, so that their websites and services contain consistently structured information. This makes it easier to discover, collate and analyse distributed data. The main outcome of Bioschemas is a collection of specifications that provide guidelines to facilitate a more consistent adoption of schema.org mark-up within the life sciences.
ISMB BioSchemas Presentation
This document provides an overview of ELIXIR, a European infrastructure for biological information. ELIXIR aims to coordinate life science data infrastructure across Europe to support data sharing and interoperability. It has 17 member countries and 2 observer countries. ELIXIR focuses on areas like metadata standards, APIs, identifiers, and secure access to data. It also promotes principles like findability, accessibility, interoperability, and reusability of data. The document discusses ELIXIR's role in supporting areas like marine metagenomics, human data, crops/plants, and rare diseases. It notes that ELIXIR's hub is located alongside the European Molecular Biology Laboratory European Bioinformatics Institute.
RDA Web service discoverability workshop
Niall Beards presentation about the BiodiversityCatalogue and how it facilitates web service discoverability, its interaction with Taverna, and it's interoperability with the bio.tools registry.
Lightningtalk BioSchemas
This is just a printscreen of our homepage for the lightning talk at the Collaborations Workshop 2016 hosted in Edinburgh
TeSS Lightning Talk - cw16
This is just a printscreen of our homepage for the lightning talk at the Collaborations Workshop 2016 hosted in Edinburgh
TeSS training eSupport System
The document discusses TeSS (Training eSupport System), a central registry maintained by ELIXIR to index training materials from various sources using a scraping process. It notes challenges with scraping including being labor intensive, sensitive to changes, and not scalable. The document proposes using Schema.org annotations on web pages to facilitate automated indexing of training materials and events. It encourages involvement in the TeSS and BioSchemas initiatives.
The Biodiversity Catalogue and support for Web Map Services - TDWG 2015
This document discusses web services and the Biodiversity Catalogue. It defines what web services are and provides an overview of the Biodiversity Catalogue, which allows users to register, find, and invoke web services. The Biodiversity Catalogue benefits both service providers and community members. For service providers, it provides easy registration, exposure to potential users, and community annotation of services. For community members, it allows exploration of web services through search and filtering and ensures long-term reliability of services through monitoring. The document also provides details on Web Map Services (WMS) and examples of WMS usage.
More from Niall Beard (15)
Bioschemas Adoption Meeting: Training materials and Events
Bioschemas Adoption Meeting: Training materials and Events
ELIXIR TeSS And Bioschemas: An aggregated portal and an aggregation tool
ELIXIR TeSS And Bioschemas: An aggregated portal and an aggregation tool
TeSS: ELIXIR Training Portal (Eubic Winter School 2017)
TeSS: ELIXIR Training Portal (Eubic Winter School 2017)
The Biodiversity Catalogue and support for Web Map Services - TDWG 2015
The Biodiversity Catalogue and support for Web Map Services - TDWG 2015
Recently uploaded
Immersive Learning That Works: Research Grounding and Paths Forward
We will metaverse into the essence of immersive learning, into its three dimensions and conceptual models. This approach encompasses elements from teaching methodologies to social involvement, through organizational concerns and technologies. Challenging the perception of learning as knowledge transfer, we introduce a 'Uses, Practices & Strategies' model operationalized by the 'Immersive Learning Brain' and ‘Immersion Cube’ frameworks. This approach offers a comprehensive guide through the intricacies of immersive educational experiences and spotlighting research frontiers, along the immersion dimensions of system, narrative, and agency. Our discourse extends to stakeholders beyond the academic sphere, addressing the interests of technologists, instructional designers, and policymakers. We span various contexts, from formal education to organizational transformation to the new horizon of an AI-pervasive society. This keynote aims to unite the iLRN community in a collaborative journey towards a future where immersive learning research and practice coalesce, paving the way for innovative educational research and practice landscapes.
快速办理(UAM毕业证书)马德里自治大学毕业证学位证一模一样
学校原件一模一样【微信：741003700 】《(UAM毕业证书)马德里自治大学毕业证学位证》【微信：741003700 】学位证，留信认证（真实可查，永久存档）原件一模一样纸张工艺/offer、雅思、外壳等材料/诚信可靠,可直接看成品样本，帮您解决无法毕业带来的各种难题！外壳，原版制作，诚信可靠，可直接看成品样本。行业标杆！精益求精，诚心合作，真诚制作！多年品质 ,按需精细制作，24小时接单,全套进口原装设备。十五年致力于帮助留学生解决难题，包您满意。
本公司拥有海外各大学样板无数，能完美还原。
1:1完美还原海外各大学毕业材料上的工艺：水印，阴影底纹，钢印LOGO烫金烫银，LOGO烫金烫银复合重叠。文字图案浮雕、激光镭射、紫外荧光、温感、复印防伪等防伪工艺。材料咨询办理、认证咨询办理请加学历顾问Q/微741003700
【主营项目】
一.毕业证【q微741003700】成绩单、使馆认证、教育部认证、雅思托福成绩单、学生卡等！
二.真实使馆公证(即留学回国人员证明,不成功不收费)
三.真实教育部学历学位认证（教育部存档！教育部留服网站永久可查）
四.办理各国各大学文凭(一对一专业服务,可全程监控跟踪进度)
如果您处于以下几种情况：
◇在校期间，因各种原因未能顺利毕业……拿不到官方毕业证【q/微741003700】
◇面对父母的压力，希望尽快拿到；
◇不清楚认证流程以及材料该如何准备；
◇回国时间很长，忘记办理；
◇回国马上就要找工作，办给用人单位看；
◇企事业单位必须要求办理的
◇需要报考公务员、购买免税车、落转户口
◇申请留学生创业基金
留信网认证的作用:
1:该专业认证可证明留学生真实身份
2:同时对留学生所学专业登记给予评定
3:国家专业人才认证中心颁发入库证书
4:这个认证书并且可以归档倒地方
5:凡事获得留信网入网的信息将会逐步更新到个人身份内，将在公安局网内查询个人身份证信息后，同步读取人才网入库信息
6:个人职称评审加20分
7:个人信誉贷款加10分
8:在国家人才网主办的国家网络招聘大会中纳入资料，供国家高端企业选择人才
Applied Science: Thermodynamics, Laws & Methodology.pdf
When I was asked to give a companion lecture in support of ‘The Philosophy of Science’ (https://shorturl.at/4pUXz) I decided not to walk through the detail of the many methodologies in order of use. Instead, I chose to employ a long standing, and ongoing, scientific development as an exemplar. And so, I chose the ever evolving story of Thermodynamics as a scientific investigation at its best.
Conducted over a period of >200 years, Thermodynamics R&D, and application, benefitted from the highest levels of professionalism, collaboration, and technical thoroughness. New layers of application, methodology, and practice were made possible by the progressive advance of technology. In turn, this has seen measurement and modelling accuracy continually improved at a micro and macro level.
Perhaps most importantly, Thermodynamics rapidly became a primary tool in the advance of applied science/engineering/technology, spanning micro-tech, to aerospace and cosmology. I can think of no better a story to illustrate the breadth of scientific methodologies and applications at their best.
20240520 Planning a Circuit Simulator in JavaScript.pptx
Evaporation step counter work. I have done a physical experiment.
(Work in progress.)
The cost of acquiring information by natural selection
This is a short talk that I gave at the Banff International Research Station workshop on Modeling and Theory in Population Biology. The idea is to try to understand how the burden of natural selection relates to the amount of information that selection puts into the genome.
It's based on the first part of this research paper:
The cost of information acquisition by natural selection
Ryan Seamus McGee, Olivia Kosterlitz, Artem Kaznatcheev, Benjamin Kerr, Carl T. Bergstrom
bioRxiv 2022.07.02.498577; doi: https://doi.org/10.1101/2022.07.02.498577
Compexometric titration/Chelatorphy titration/chelating titration
Classification
Metal ion ion indicators
Masking and demasking reagents
Estimation of Magnisium sulphate
Calcium gluconate
Complexometric Titration/ chelatometry titration/chelating titration, introduction, Types-
1.Direct Titration
2.Back Titration
3.Replacement Titration
4.Indirect Titration
Masking agent, Demasking agents
formation of complex
comparition between masking and demasking agents,
Indicators/Metal ion indicators/ Metallochromic indicators/pM indicators,
Visual Technique,PM indicators (metallochromic), Indicators of pH, Redox Indicators
Instrumental Techniques-Photometry
Potentiometry
Miscellaneous methods.
Complex titration with EDTA.
Shallowest Oil Discovery of Turkiye.pptx
The Petroleum System of the Çukurova Field - the Shallowest Oil Discovery of Türkiye, Adana
Describing and Interpreting an Immersive Learning Case with the Immersion Cub...
Current descriptions of immersive learning cases are often difficult or impossible to compare. This is due to a myriad of different options on what details to include, which aspects are relevant, and on the descriptive approaches employed. Also, these aspects often combine very specific details with more general guidelines or indicate intents and rationales without clarifying their implementation. In this paper we provide a method to describe immersive learning cases that is structured to enable comparisons, yet flexible enough to allow researchers and practitioners to decide which aspects to include. This method leverages a taxonomy that classifies educational aspects at three levels (uses, practices, and strategies) and then utilizes two frameworks, the Immersive Learning Brain and the Immersion Cube, to enable a structured description and interpretation of immersive learning cases. The method is then demonstrated on a published immersive learning case on training for wind turbine maintenance using virtual reality. Applying the method results in a structured artifact, the Immersive Learning Case Sheet, that tags the case with its proximal uses, practices, and strategies, and refines the free text case description to ensure that matching details are included. This contribution is thus a case description method in support of future comparative research of immersive learning cases. We then discuss how the resulting description and interpretation can be leveraged to change immersion learning cases, by enriching them (considering low-effort changes or additions) or innovating (exploring more challenging avenues of transformation). The method holds significant promise to support better-grounded research in immersive learning.
The debris of the ‘last major merger’ is dynamically young
The Milky Way’s (MW) inner stellar halo contains an [Fe/H]-rich component with highly eccentric orbits, often referred to as the
‘last major merger.’ Hypotheses for the origin of this component include Gaia-Sausage/Enceladus (GSE), where the progenitor
collided with the MW proto-disc 8–11 Gyr ago, and the Virgo Radial Merger (VRM), where the progenitor collided with the
MW disc within the last 3 Gyr. These two scenarios make different predictions about observable structure in local phase space,
because the morphology of debris depends on how long it has had to phase mix. The recently identified phase-space folds in Gaia
DR3 have positive caustic velocities, making them fundamentally different than the phase-mixed chevrons found in simulations
at late times. Roughly 20 per cent of the stars in the prograde local stellar halo are associated with the observed caustics. Based
on a simple phase-mixing model, the observed number of caustics are consistent with a merger that occurred 1–2 Gyr ago.
We also compare the observed phase-space distribution to FIRE-2 Latte simulations of GSE-like mergers, using a quantitative
measurement of phase mixing (2D causticality). The observed local phase-space distribution best matches the simulated data
1–2 Gyr after collision, and certainly not later than 3 Gyr. This is further evidence that the progenitor of the ‘last major merger’
did not collide with the MW proto-disc at early times, as is thought for the GSE, but instead collided with the MW disc within
the last few Gyr, consistent with the body of work surrounding the VRM.
在线办理(salfor毕业证书)索尔福德大学毕业证毕业完成信一模一样
学校原件一模一样【微信：741003700 】《(salfor毕业证书)索尔福德大学毕业证》【微信：741003700 】学位证，留信认证（真实可查，永久存档）原件一模一样纸张工艺/offer、雅思、外壳等材料/诚信可靠,可直接看成品样本，帮您解决无法毕业带来的各种难题！外壳，原版制作，诚信可靠，可直接看成品样本。行业标杆！精益求精，诚心合作，真诚制作！多年品质 ,按需精细制作，24小时接单,全套进口原装设备。十五年致力于帮助留学生解决难题，包您满意。
本公司拥有海外各大学样板无数，能完美还原。
1:1完美还原海外各大学毕业材料上的工艺：水印，阴影底纹，钢印LOGO烫金烫银，LOGO烫金烫银复合重叠。文字图案浮雕、激光镭射、紫外荧光、温感、复印防伪等防伪工艺。材料咨询办理、认证咨询办理请加学历顾问Q/微741003700
【主营项目】
一.毕业证【q微741003700】成绩单、使馆认证、教育部认证、雅思托福成绩单、学生卡等！
二.真实使馆公证(即留学回国人员证明,不成功不收费)
三.真实教育部学历学位认证（教育部存档！教育部留服网站永久可查）
四.办理各国各大学文凭(一对一专业服务,可全程监控跟踪进度)
如果您处于以下几种情况：
◇在校期间，因各种原因未能顺利毕业……拿不到官方毕业证【q/微741003700】
◇面对父母的压力，希望尽快拿到；
◇不清楚认证流程以及材料该如何准备；
◇回国时间很长，忘记办理；
◇回国马上就要找工作，办给用人单位看；
◇企事业单位必须要求办理的
◇需要报考公务员、购买免税车、落转户口
◇申请留学生创业基金
留信网认证的作用:
1:该专业认证可证明留学生真实身份
2:同时对留学生所学专业登记给予评定
3:国家专业人才认证中心颁发入库证书
4:这个认证书并且可以归档倒地方
5:凡事获得留信网入网的信息将会逐步更新到个人身份内，将在公安局网内查询个人身份证信息后，同步读取人才网入库信息
6:个人职称评审加20分
7:个人信誉贷款加10分
8:在国家人才网主办的国家网络招聘大会中纳入资料，供国家高端企业选择人才
The binding of cosmological structures by massless topological defects
Assuming spherical symmetry and weak field, it is shown that if one solves the Poisson equation or the Einstein field
equations sourced by a topological defect, i.e. a singularity of a very specific form, the result is a localized gravitational
field capable of driving flat rotation (i.e. Keplerian circular orbits at a constant speed for all radii) of test masses on a thin
spherical shell without any underlying mass. Moreover, a large-scale structure which exploits this solution by assembling
concentrically a number of such topological defects can establish a flat stellar or galactic rotation curve, and can also deflect
light in the same manner as an equipotential (isothermal) sphere. Thus, the need for dark matter or modified gravity theory is
mitigated, at least in part.
Equivariant neural networks and representation theory
Or: Beyond linear.
Abstract: Equivariant neural networks are neural networks that incorporate symmetries. The nonlinear activation functions in these networks result in interesting nonlinear equivariant maps between simple representations, and motivate the key player of this talk: piecewise linear representation theory.
Disclaimer: No one is perfect, so please mind that there might be mistakes and typos.
dtubbenhauer@gmail.com
Corrected slides: dtubbenhauer.com/talks.html
ESR spectroscopy in liquid food and beverages.pptx
With increasing population, people need to rely on packaged food stuffs. Packaging of food materials requires the preservation of food. There are various methods for the treatment of food to preserve them and irradiation treatment of food is one of them. It is the most common and the most harmless method for the food preservation as it does not alter the necessary micronutrients of food materials. Although irradiated food doesn’t cause any harm to the human health but still the quality assessment of food is required to provide consumers with necessary information about the food. ESR spectroscopy is the most sophisticated way to investigate the quality of the food and the free radicals induced during the processing of the food. ESR spin trapping technique is useful for the detection of highly unstable radicals in the food. The antioxidant capability of liquid food and beverages in mainly performed by spin trapping technique.
Direct Seeded Rice - Climate Smart Agriculture
Direct Seeded Rice - Climate Smart AgricultureInternational Food Policy Research Institute- South Asia Office
PPT on Direct Seeded Rice presented at the three-day 'Training and Validation Workshop on Modules of Climate Smart Agriculture (CSA) Technologies in South Asia' workshop on April 22, 2024.
ESA/ACT Science Coffee: Diego Blas - Gravitational wave detection with orbita...
ESA/ACT Science Coffee: Diego Blas - Gravitational wave detection with orbita...Advanced-Concepts-Team
Presentation in the Science Coffee of the Advanced Concepts Team of the European Space Agency on the 07.06.2024.
Speaker: Diego Blas (IFAE/ICREA)
Title: Gravitational wave detection with orbital motion of Moon and artificial
Abstract:
In this talk I will describe some recent ideas to find gravitational waves from supermassive black holes or of primordial origin by studying their secular effect on the orbital motion of the Moon or satellites that are laser ranged.Recently uploaded (20)
Immersive Learning That Works: Research Grounding and Paths Forward
Immersive Learning That Works: Research Grounding and Paths Forward
Applied Science: Thermodynamics, Laws & Methodology.pdf
Applied Science: Thermodynamics, Laws & Methodology.pdf
20240520 Planning a Circuit Simulator in JavaScript.pptx
20240520 Planning a Circuit Simulator in JavaScript.pptx
The cost of acquiring information by natural selection
The cost of acquiring information by natural selection
Compexometric titration/Chelatorphy titration/chelating titration
Compexometric titration/Chelatorphy titration/chelating titration
Describing and Interpreting an Immersive Learning Case with the Immersion Cub...
Describing and Interpreting an Immersive Learning Case with the Immersion Cub...
The debris of the ‘last major merger’ is dynamically young
The debris of the ‘last major merger’ is dynamically young
The binding of cosmological structures by massless topological defects
The binding of cosmological structures by massless topological defects
Equivariant neural networks and representation theory
Equivariant neural networks and representation theory
ESR spectroscopy in liquid food and beverages.pptx
ESR spectroscopy in liquid food and beverages.pptx
GBSN - Biochemistry (Unit 6) Chemistry of Proteins
GBSN - Biochemistry (Unit 6) Chemistry of Proteins
ESA/ACT Science Coffee: Diego Blas - Gravitational wave detection with orbita...
ESA/ACT Science Coffee: Diego Blas - Gravitational wave detection with orbita...
Bioschemas - TeSS Integration @ Rothamsted Hackathon 2016
- 1. Events, training materials and integration in TeSS Niall Beard Bioschemas Hackathon, Rothamsted Research Centre 9th November 2016
- 2. Quick TeSS Overview • Aggregation and registration of training events and materials • Tools to filter, search, and discover • Users can organize into packages and training workflows • Interlinking with other ELIXIR registries • ELIXIR Node ‘shop window’ view • https://tess.elixir-uk.org
- 3. Aggregation – Not a very API situation
- 4. HTML scraper • Difficult to write. • - Every site is unique • - Some have more treacherous HTML • Very susceptible to change • - Fixing is re-implementing. • - Build up of technical debt http://cdn2.bigcommerce.com/server100/367cc/p
- 5. Mark up using schema.org – Google Markup Helper
- 6. Mark up using schema.org –Google Markup Helper
- 9. Store and display in TeSS
- 10. Distributed Via TeSS and via widgets embedded in pages Passes to
- 11. Mark up types • HTML By hand • CMS Extensions – Drupal, Joomla, Wordpress • Github Pages. YAML file -> JSON-LD • Framework Extensions – Ruby on Rails, Django
- 12. Common Issues
Editor's Notes
- Distributed Research Infrastrtucture. Developing training opportunities across 20+ member nodes Collect and harmonize. Feture rich environment. Connected outwardly to complimentary projects. Promote ELIXIR nodes and keep access to data open to be utilized