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I.     Purpose
II.    Background Information
III.   Methods
IV.    Results
V.     Conclusion
VI.    Future Considerations
VII.   Acknowledgements
There are no commercial standards of
    mycosporine-like amino acids (MAAs) available.

 Isolate MAAs to be used for standards
 Become proficient with HPLC system and
  software
 Document methods for future student research
 Ultraviolet radiation (UVR)
 Mycosporine-like amino acids (MAAs)
 Reversed-phase high performance liquid chromatography
  (HPLC)
   A portion of the electromagnetic spectrum
    between visible light and x-rays




       http://missionscience.nasa.gov/ems/10_ultravioletwaves.html
Karentz 2001
adeletang8.edu.glogster.com
http://earthobservatory.nasa.gov/Features/UVB/
   UV-absorbing compounds that filter radiation in
    the 309-360 nm range




                       Karentz 2001
O                          NH

                       OCH3                        OCH3
mycosporine-glycine                                         palythine
 max = 310 nm                                                max = 320 n

           HO OH       NH             HO OH        NH

                        CO2 H                       CO2 H




               CO2 H                      CO2 H

                   N                          N
              OH                         OH                 porphyra-33
 shinorine                                         OCH
                                                             max = 334 n
                       OCH3                           3
  max = 334 nm


           HO OH       NH             HO OH        NH

                        CO2 H                       CO2 H


                       Karentz 2001
Karentz 2001
 Chromatography = the separation of mixtures
 Liquid = liquid mobile phase
 High-performance = small packing materials and
  high pressure
 Reversed-phase = non-polar stationary phase
http://commons.wikimedia.org/wiki/File:HPLC_apparatus.svg
   Conditions to consider:
    › Composition of mobile phase (running solvent)
    › Composition of stationary phase (packing material of
      column)
    › Flow rate
    › Injection volume
    › Run time
1. Sample collection and storage performed by
   Professor Karentz
2. Extraction with methanol
3. Separation of MAAs by HPLC
4. Isolation of MAAs by fraction collecting
5. Run samples in scanning spectrophotometer
6. Co-chromatography to identify common MAAs
1.   Sample collection and storage performed by Professor Karentz
   Rhodophyta (red algae)
    ›   Anthopleura sola
    ›   Erythrophyllum delesserioides
    ›   Gigartina papillata
    ›   Hymenena flabelligera
    ›   Iridaea cordata
    ›   Mastocarpus papillatus
    ›   Mazzaella splendens
    ›   Plocamium cartilagineum
    ›   Smithora naiadum
   Other
    ›   Euphausia superba (krill)
    ›   Limacina helicina (pteropod)
    ›   Orchomene plebes (amphipod)
    ›   Prasiola crispa (green algae)
2.   Extraction with methanol
3.   Separation of MAAs by HPLC
4.   Isolation of MAAs by fraction collecting
5.   Run samples in scanning spectrophotometer
6.   Co-chromatography to identify common MAAs
   Species selected for MAA isolation
    › Gigartina papillata
    › Iridaea cordata
    › Mastocarpus papillatus
    › Mazaella splendens
   Co-chromatography of Iridaea cordata and
    Gigartina papillata
Species     Peak Landmark      Delay      Collection
              Retention Time                 Amount
   Iridaea      3 minutes,     30 seconds    25 drops
  cordata       22 seconds
 Gigartina      3 minutes,     25 seconds   25 drops
  papillata     17 seconds
Mastocarpus     3 minutes,      1 minute,   30 drops
 papillatus     18 seconds     15 seconds
 Mazzaella      3 minutes,     50 seconds   15 drops
 splendens      30 seconds
Tube 1               Tube 2




Tube 3               Tube 4




Mazaella splendens
 MAA isolation was successful
 Co-chromatography confirmed identical MAAs
 Reproducible for future student research
    Preparative HPLC                              Mass spectrometry




http://www.mac-mod.com/ace_catalog/ac-prep.html
                                                  http://www.chemguide.co.uk/analysis/masspec/
 Professor Deneb Karentz
 Professor Patricia Schulz
 Professor Megan Bolitho
 David and Bela Villongco

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Biology Honors Research Thesis

  • 1.
  • 2. I. Purpose II. Background Information III. Methods IV. Results V. Conclusion VI. Future Considerations VII. Acknowledgements
  • 3. There are no commercial standards of mycosporine-like amino acids (MAAs) available.  Isolate MAAs to be used for standards  Become proficient with HPLC system and software  Document methods for future student research
  • 4.  Ultraviolet radiation (UVR)  Mycosporine-like amino acids (MAAs)  Reversed-phase high performance liquid chromatography (HPLC)
  • 5. A portion of the electromagnetic spectrum between visible light and x-rays http://missionscience.nasa.gov/ems/10_ultravioletwaves.html
  • 8. UV-absorbing compounds that filter radiation in the 309-360 nm range Karentz 2001
  • 9. O NH OCH3 OCH3 mycosporine-glycine palythine max = 310 nm max = 320 n HO OH NH HO OH NH CO2 H CO2 H CO2 H CO2 H N N OH OH porphyra-33 shinorine OCH max = 334 n OCH3 3 max = 334 nm HO OH NH HO OH NH CO2 H CO2 H Karentz 2001
  • 11.  Chromatography = the separation of mixtures  Liquid = liquid mobile phase  High-performance = small packing materials and high pressure  Reversed-phase = non-polar stationary phase
  • 13. Conditions to consider: › Composition of mobile phase (running solvent) › Composition of stationary phase (packing material of column) › Flow rate › Injection volume › Run time
  • 14. 1. Sample collection and storage performed by Professor Karentz 2. Extraction with methanol 3. Separation of MAAs by HPLC 4. Isolation of MAAs by fraction collecting 5. Run samples in scanning spectrophotometer 6. Co-chromatography to identify common MAAs
  • 15. 1. Sample collection and storage performed by Professor Karentz
  • 16. Rhodophyta (red algae) › Anthopleura sola › Erythrophyllum delesserioides › Gigartina papillata › Hymenena flabelligera › Iridaea cordata › Mastocarpus papillatus › Mazzaella splendens › Plocamium cartilagineum › Smithora naiadum  Other › Euphausia superba (krill) › Limacina helicina (pteropod) › Orchomene plebes (amphipod) › Prasiola crispa (green algae)
  • 17. 2. Extraction with methanol
  • 18. 3. Separation of MAAs by HPLC
  • 19. 4. Isolation of MAAs by fraction collecting
  • 20. 5. Run samples in scanning spectrophotometer
  • 21. 6. Co-chromatography to identify common MAAs
  • 22. Species selected for MAA isolation › Gigartina papillata › Iridaea cordata › Mastocarpus papillatus › Mazaella splendens  Co-chromatography of Iridaea cordata and Gigartina papillata
  • 23. Species Peak Landmark Delay Collection Retention Time Amount Iridaea 3 minutes, 30 seconds 25 drops cordata 22 seconds Gigartina 3 minutes, 25 seconds 25 drops papillata 17 seconds Mastocarpus 3 minutes, 1 minute, 30 drops papillatus 18 seconds 15 seconds Mazzaella 3 minutes, 50 seconds 15 drops splendens 30 seconds
  • 24.
  • 25. Tube 1 Tube 2 Tube 3 Tube 4 Mazaella splendens
  • 26.
  • 27.
  • 28.  MAA isolation was successful  Co-chromatography confirmed identical MAAs  Reproducible for future student research
  • 29. Preparative HPLC  Mass spectrometry http://www.mac-mod.com/ace_catalog/ac-prep.html http://www.chemguide.co.uk/analysis/masspec/
  • 30.  Professor Deneb Karentz  Professor Patricia Schulz  Professor Megan Bolitho  David and Bela Villongco

Editor's Notes

  1. (frozen, lyophilized, ground, and stored at -80 C)