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Daniela	
  Sanges,	
  PhD	
  
endoderm	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  mesoderm	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  ectoderm	
  
lung	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  pancreas	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  heart	
  	
  	
  	
  	
  	
  	
  red	
  blood	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  skin	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  neuron	
  
Regenera9on	
  poten9al	
  
Evolu9onary	
  scale	
  
Planaria	
  
Salamander	
  
Mammalian	
  
n  Planaria	
  have	
  an	
  amazing	
  ability	
  to	
  regenerate	
  parts	
  of	
  
themselves	
  
n  Planaria	
  regenera9on	
  is	
  a	
  great	
  model	
  for	
  demonstra9ng	
  stem	
  
cell	
  func9on	
  and	
  complexity	
  of	
  9ssue	
  regenera9on	
  
n  They	
  can	
  grow	
  easily	
  in	
  the	
  lab	
  
n  Freshwater	
  flatworms	
  (phylum:	
  Platyhelminthes)	
  
n  Live	
  in	
  freshwater	
  under	
  leaves	
  and	
  stones	
  
n  Avoid	
  light	
  (“nega9ve	
  phototaxis”)	
  
n  Free	
  living	
  –	
  not	
  parasites	
  
n  Carnivores	
  –	
  eat	
  decaying	
  meat,	
  insects	
  and	
  larvae	
  (egg	
  
yolks	
  or	
  liver	
  in	
  the	
  lab)	
  
n  1-­‐20	
  mm	
  in	
  size	
  
n  Long	
  lived	
  
n  Use	
  sexual	
  or	
  asexual	
  reproduc9on	
  
n  20-­‐30%	
  of	
  all	
  the	
  cells	
  in	
  a	
  planaria	
  are	
  
Neoblasts.	
  
	
  
n  Neoblasts	
  divide	
  by	
  mitosis	
  and	
  can	
  make	
  
more	
  of	
  themselves.	
  	
  They	
  are	
  the	
  only	
  
dividing	
  cells	
  in	
  planaria.	
  
	
  
n  When	
  a	
  planaria	
  is	
  wounded,	
  neoblasts	
  
migrate	
  to	
  the	
  site	
  and	
  begin	
  dividing	
  
	
  
n  Neoblasts	
  can	
  become	
  ANY	
  cell	
  the	
  
planaria	
  needs—nerve	
  cells,	
  flame	
  cells,	
  
reproduc9ve	
  cells…	
  
Ann. Rev. Cell. Dev. Biol. 20:725-757, 2004
Three types of planaria
with their neoblasts
labeled with BrdU
BrdU	
  (bromodeoxyuridine)	
  is	
  	
  
subs9tuted	
  for	
  thymine	
  during	
  DNA	
  replica9on.	
  
Only	
  dividing	
  cells—in	
  this	
  	
  
case	
  the	
  neoblasts—will	
  show	
  	
  
detec9ble	
  amounts	
  of	
  BrdU.	
  
A.	
  Phagocata	
  sp.	
  
B.	
  Girardia	
  dorotocephala	
  
C.	
  Schmidtea	
  mediterranea	
  
	
  Dugesia	
  sp.	
  
To	
  set	
  up	
  an	
  experiment	
  of	
  
regenera9on	
  with	
  
Planaria	
  in	
  the	
  classroom	
  
n  The	
  type	
  of	
  water	
  is	
  very	
  important!	
  Fresh	
  water	
  from	
  a	
  
pond,	
  stream	
  or	
  lake	
  is	
  best;	
  spring	
  water	
  is	
  adequate	
  
	
  
n  Keep	
  cultures	
  in	
  a	
  cool,	
  dark	
  place	
  
	
  
n  Feed	
  planaria	
  at	
  least	
  once	
  a	
  week	
  
	
  
n  Change	
  the	
  water	
  twice	
  a	
  week,	
  especially	
  a_er	
  feeding	
  
	
  
n  A_er	
  cu`ng	
  them,	
  the	
  cultures	
  should	
  not	
  be	
  fed	
  
Each	
  team	
  will	
  receive	
  3	
  planaria:	
  
	
  
n  Experimental	
  Planaria	
  #1	
  
	
   	
  Every	
  team	
  will	
  cut	
  this	
  into	
  half,	
  separa9ng	
  	
  
	
   	
  the	
  anterior	
  from	
  the	
  posterior	
  halves.	
  
	
  
n  Experimental	
  Planaria	
  #2	
  
	
   	
  This	
  will	
  be	
  cut	
  in	
  a	
  manner	
  determined	
  by	
  your	
  team.	
  
	
  
n  Control	
  Planaria	
  
	
   	
  This	
  will	
  not	
  be	
  cut.	
  
Used	
  with	
  permission	
  from	
  UC	
  Museum	
  of	
  Paleontology	
  
How	
  will	
  the	
  Planaria	
  regenerate?	
  
This	
  step	
  is	
  important	
  to	
  learn	
  to	
  formulate	
  an	
  HIPOTHESIS	
  
Report	
  the	
  informa9on	
  and	
  the	
  results	
  DAILY	
  
§ A_er	
  you	
  cut	
  the	
  planaria,	
  how	
  does	
  the	
  mobility	
  of	
  the	
  tail	
  
fragments	
  compare	
  with	
  the	
  mobility	
  of	
  the	
  head	
  fragments?	
  
Do	
  they	
  move	
  the	
  same	
  or	
  differently?	
  If	
  they	
  move	
  
differently,	
  why	
  do	
  you	
  think	
  that	
  is?	
  
§ Do	
  you	
  think	
  the	
  head	
  fragments	
  prefer	
  light	
  or	
  shade?	
  
How	
  could	
  you	
  test	
  this?	
  	
  	
  
§ Did	
  all	
  the	
  tail	
  fragments	
  regenerate	
  photoreceptors?	
  If	
  not,	
  
which	
  fragments	
  did	
  not?	
  	
  
§ Did	
  all	
  the	
  tail	
  fragments	
  regenerate	
  photoreceptors	
  at	
  the	
  same	
  
rate?	
  If	
  not,	
  which	
  were	
  slower	
  and	
  which	
  were	
  faster?	
  	
  
§ Did	
  you	
  no9ce	
  a	
  change	
  in	
  mobility	
  in	
  the	
  tail	
  fragments	
  over	
  
9me?	
  What	
  about	
  the	
  head	
  fragments?	
  	
  
§ As	
  the	
  days	
  went	
  by,	
  what	
  did	
  you	
  no9ce	
  about	
  the	
  color	
  of	
  the	
  
regenera9ng	
  9ssue?	
  	
  
Days	
  
Head	
   Middle	
   Tail	
  
Did	
  all	
  the	
  tail	
  fragments	
  regenerate	
  photoreceptors	
  at	
  the	
  same	
  rate?	
  
If	
  not,	
  which	
  were	
  slower	
  and	
  which	
  were	
  faster?	
  	
  
	
  
Regenera9on	
  poten9al	
  
Evolu9onary	
  scale	
  
Planaria	
  
Salamander	
  
Mammalian	
  
High	
   Moderate	
   Low	
  
 
	
  
n  LOST	
  OR	
  ALTERED	
  GENETIC	
  PROGRAM	
  
	
  
	
  
	
  
	
  
n  SMALLEST	
  STEM	
  CELL	
  PULLS	
  
	
  
	
  
turning	
  on	
  the	
  	
  
right	
  genes	
  at	
  the	
  	
  
right	
  9me	
  	
  
in	
  the	
  cells	
  that	
  come	
  from	
  the	
  
dividing	
  stem	
  cells	
  (neoblast).	
  
What is a stem cell?

a single cell that can…

replicate itself, or…

differentiate into many cell types
Differen9a9on	
  
De-­‐differen9a9on	
  
A	
   B	
   Trans-­‐differen9a9on	
  
Pluripotent	
   Mul9potent	
  
embryonic	
  stem	
  cell	
   soma9c	
  cell	
  
pluripotent	
  genes	
  
cell	
  fusion	
  
reprogramming	
  
embryonic	
  stem	
  cell	
   soma9c	
  cell	
  
pluripotent	
  genes	
  
cell	
  fusion	
  
reprogramming	
  
WNT	
  
• Re9ni9s	
  Pigmentosa	
  
• Usher	
  Syndrome	
  
• Amaurosis	
  de	
  Leber	
  
• Glaucoma	
  
• Diabe9s	
  re9nopathy	
  
• Macular	
  Degenera9on	
  
• Re9nal	
  Detachment	
  
RETINAL	
  DEGENERATIONS	
  
Sanges	
  et	
  al.,	
  Cell	
  reports,	
  2013	
  
d0	
   d2-­‐4	
   d30	
  
Damage-­‐dependent	
  
Cell	
  fusion	
  
Wnt-­‐mediated	
  
reprogramming	
  	
  
Regenera9on	
  
	
  	
  
Sanges	
  et	
  al.,	
  Cell	
  reports,	
  2013	
  
§ General	
  discussion	
  on	
  9ssue	
  regenera9on	
  
§ Planaria	
  regenera9on	
  experiment	
  in	
  the	
  classroom	
  (Wednesday)	
  
	
  	
  Predic9on	
  exercise	
  
	
  	
  Prac9cal	
  and	
  theore9cal	
  ques9on	
  on	
  the	
  experiment	
  
§ Mammalian	
  Stem	
  Cells	
  and	
  Reprogramming	
  (Thursday)	
  
§ Adult	
  stem	
  cells.	
  Summary	
  of	
  the	
  course	
  
	
  
AmgenTeach Webinar 2 - Stem Cell Biology

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AmgenTeach Webinar 2 - Stem Cell Biology

  • 2. endoderm                                      mesoderm                                      ectoderm   lung                    pancreas                    heart              red  blood                      skin                      neuron  
  • 3.
  • 4. Regenera9on  poten9al   Evolu9onary  scale   Planaria   Salamander   Mammalian  
  • 5. n  Planaria  have  an  amazing  ability  to  regenerate  parts  of   themselves   n  Planaria  regenera9on  is  a  great  model  for  demonstra9ng  stem   cell  func9on  and  complexity  of  9ssue  regenera9on   n  They  can  grow  easily  in  the  lab  
  • 6. n  Freshwater  flatworms  (phylum:  Platyhelminthes)   n  Live  in  freshwater  under  leaves  and  stones   n  Avoid  light  (“nega9ve  phototaxis”)   n  Free  living  –  not  parasites   n  Carnivores  –  eat  decaying  meat,  insects  and  larvae  (egg   yolks  or  liver  in  the  lab)   n  1-­‐20  mm  in  size   n  Long  lived   n  Use  sexual  or  asexual  reproduc9on  
  • 7.
  • 8. n  20-­‐30%  of  all  the  cells  in  a  planaria  are   Neoblasts.     n  Neoblasts  divide  by  mitosis  and  can  make   more  of  themselves.    They  are  the  only   dividing  cells  in  planaria.     n  When  a  planaria  is  wounded,  neoblasts   migrate  to  the  site  and  begin  dividing     n  Neoblasts  can  become  ANY  cell  the   planaria  needs—nerve  cells,  flame  cells,   reproduc9ve  cells…   Ann. Rev. Cell. Dev. Biol. 20:725-757, 2004
  • 9. Three types of planaria with their neoblasts labeled with BrdU BrdU  (bromodeoxyuridine)  is     subs9tuted  for  thymine  during  DNA  replica9on.   Only  dividing  cells—in  this     case  the  neoblasts—will  show     detec9ble  amounts  of  BrdU.   A.  Phagocata  sp.   B.  Girardia  dorotocephala   C.  Schmidtea  mediterranea    Dugesia  sp.  
  • 10. To  set  up  an  experiment  of   regenera9on  with   Planaria  in  the  classroom  
  • 11. n  The  type  of  water  is  very  important!  Fresh  water  from  a   pond,  stream  or  lake  is  best;  spring  water  is  adequate     n  Keep  cultures  in  a  cool,  dark  place     n  Feed  planaria  at  least  once  a  week     n  Change  the  water  twice  a  week,  especially  a_er  feeding     n  A_er  cu`ng  them,  the  cultures  should  not  be  fed  
  • 12. Each  team  will  receive  3  planaria:     n  Experimental  Planaria  #1      Every  team  will  cut  this  into  half,  separa9ng        the  anterior  from  the  posterior  halves.     n  Experimental  Planaria  #2      This  will  be  cut  in  a  manner  determined  by  your  team.     n  Control  Planaria      This  will  not  be  cut.   Used  with  permission  from  UC  Museum  of  Paleontology  
  • 13. How  will  the  Planaria  regenerate?   This  step  is  important  to  learn  to  formulate  an  HIPOTHESIS  
  • 14. Report  the  informa9on  and  the  results  DAILY  
  • 15.
  • 16.
  • 17.
  • 18. § A_er  you  cut  the  planaria,  how  does  the  mobility  of  the  tail   fragments  compare  with  the  mobility  of  the  head  fragments?   Do  they  move  the  same  or  differently?  If  they  move   differently,  why  do  you  think  that  is?   § Do  you  think  the  head  fragments  prefer  light  or  shade?   How  could  you  test  this?      
  • 19. § Did  all  the  tail  fragments  regenerate  photoreceptors?  If  not,   which  fragments  did  not?     § Did  all  the  tail  fragments  regenerate  photoreceptors  at  the  same   rate?  If  not,  which  were  slower  and  which  were  faster?     § Did  you  no9ce  a  change  in  mobility  in  the  tail  fragments  over   9me?  What  about  the  head  fragments?     § As  the  days  went  by,  what  did  you  no9ce  about  the  color  of  the   regenera9ng  9ssue?    
  • 20. Days   Head   Middle   Tail   Did  all  the  tail  fragments  regenerate  photoreceptors  at  the  same  rate?   If  not,  which  were  slower  and  which  were  faster?      
  • 21. Regenera9on  poten9al   Evolu9onary  scale   Planaria   Salamander   Mammalian  
  • 22. High   Moderate   Low  
  • 23.     n  LOST  OR  ALTERED  GENETIC  PROGRAM           n  SMALLEST  STEM  CELL  PULLS       turning  on  the     right  genes  at  the     right  9me     in  the  cells  that  come  from  the   dividing  stem  cells  (neoblast).  
  • 24. What is a stem cell? a single cell that can… replicate itself, or… differentiate into many cell types
  • 25.
  • 26.
  • 27.
  • 28.
  • 29. Differen9a9on   De-­‐differen9a9on   A   B   Trans-­‐differen9a9on  
  • 30.
  • 31.
  • 32.
  • 33.
  • 35.
  • 36.
  • 37.
  • 38. embryonic  stem  cell   soma9c  cell   pluripotent  genes   cell  fusion   reprogramming  
  • 39. embryonic  stem  cell   soma9c  cell   pluripotent  genes   cell  fusion   reprogramming   WNT  
  • 40. • Re9ni9s  Pigmentosa   • Usher  Syndrome   • Amaurosis  de  Leber   • Glaucoma   • Diabe9s  re9nopathy   • Macular  Degenera9on   • Re9nal  Detachment   RETINAL  DEGENERATIONS  
  • 41. Sanges  et  al.,  Cell  reports,  2013  
  • 42. d0   d2-­‐4   d30   Damage-­‐dependent   Cell  fusion   Wnt-­‐mediated   reprogramming     Regenera9on       Sanges  et  al.,  Cell  reports,  2013  
  • 43. § General  discussion  on  9ssue  regenera9on   § Planaria  regenera9on  experiment  in  the  classroom  (Wednesday)      Predic9on  exercise      Prac9cal  and  theore9cal  ques9on  on  the  experiment   § Mammalian  Stem  Cells  and  Reprogramming  (Thursday)   § Adult  stem  cells.  Summary  of  the  course