ABSTRACT
The global view of ocean productivity has been defined for the past three decades by satellite-derived images of optical properties of the ocean’s surface layer. Yet in most of the ocean, zones of enhanced phytoplankton production and nutrient recycling are located at depths below the view of optical satellites. In the subtropical gyres, the almost ubiquitous deep chlorophyll maximum is often located at depths exceeding 100m, along density interfaces at a boundary between the down welling light flux and upward transport of nutrients. Below the chlorophyll maximum heterotrophic production is the dominant process resulting in strong oxygen consumption and dissolved nutrient regeneration. Observing the physical forcing and biogeochemical dynamics that drive this system at the relevant time scales ranging from the diel to the seasonal has been a long-standing challenge in oceanography. In particular, measuring the processes occurring through perturbations to relaxation has often been more happenstance than design. In this presentation we describe advances in sensor systems deployed on autonomous robotic profilers to quantify carbon, oxygen and nutrient cycling within the interior ocean and present examples from the subtropical Indian Ocean and western Mediterranean.
Acknowledgements: Funding for CSIRO provided through the Australia-India Strategic Research Fund, OCE Postdoctoral fellowship scheme and Antarctic Climate and Ecosystems Cooperative Research Centre.
Presentation to the Canadian Department of Fisheries and Oceans expert committee assessing the effectiveness of current mitigation guidelines for seismic surveys (oil and gas exploration at sea).
Here's a glimpse of what our group has been working on this week. The video is part of our presentation, so there's no sound. But in short, we've been mapping out kelp growth around Catalina Island and analyzing threats to the kelp population. Special thanks to the USC Wrigley Institute for Environmental Studies for all of the resources they provided us.
Investigation of Groundwater Potential and Aquifer Protective Capacity of Par...Premier Publishers
The aim of this study was to investigate groundwater potential and aquifer protective capacity of an area behind the College of Science, Federal University of Petroleum Resources, Effurun-Warri area of Delta State, Nigeria. The data was acquired using ABEM SAS 4000 Terrameter and processed using IPI2win and Interpex software. Five Vertical Electrical Soundings were carried out with maximum current electrode separation (AB) of 120 m. The VES curves generated from the data revealed HKH curve type for VES 1 and VES 2, KQH curve for VES 3 and KH curve for VES 4 and 5. Five resistivity layers were identified for VES 1 - 3 while four resistivity layers were identified for VES 4 – 5. Analysis and interpretation of VES data obtained from the study area showed VES 3, VES 4 and VES 5 to be most appropriate locations to be explored for borehole development due to low resistivity of the weathered/fractured aquiferous layers coupled with the relatively high thicknesses of the weathered layers. However, all the aquifers in the VES locations are poorly protected due to the very low aquifer protective capacity parameters in the VES locations.
Presentation to the Canadian Department of Fisheries and Oceans expert committee assessing the effectiveness of current mitigation guidelines for seismic surveys (oil and gas exploration at sea).
Here's a glimpse of what our group has been working on this week. The video is part of our presentation, so there's no sound. But in short, we've been mapping out kelp growth around Catalina Island and analyzing threats to the kelp population. Special thanks to the USC Wrigley Institute for Environmental Studies for all of the resources they provided us.
Investigation of Groundwater Potential and Aquifer Protective Capacity of Par...Premier Publishers
The aim of this study was to investigate groundwater potential and aquifer protective capacity of an area behind the College of Science, Federal University of Petroleum Resources, Effurun-Warri area of Delta State, Nigeria. The data was acquired using ABEM SAS 4000 Terrameter and processed using IPI2win and Interpex software. Five Vertical Electrical Soundings were carried out with maximum current electrode separation (AB) of 120 m. The VES curves generated from the data revealed HKH curve type for VES 1 and VES 2, KQH curve for VES 3 and KH curve for VES 4 and 5. Five resistivity layers were identified for VES 1 - 3 while four resistivity layers were identified for VES 4 – 5. Analysis and interpretation of VES data obtained from the study area showed VES 3, VES 4 and VES 5 to be most appropriate locations to be explored for borehole development due to low resistivity of the weathered/fractured aquiferous layers coupled with the relatively high thicknesses of the weathered layers. However, all the aquifers in the VES locations are poorly protected due to the very low aquifer protective capacity parameters in the VES locations.
Reckless driving is defined as a mental state which shows a neglect for the rules of the road. This type of behavior quite often causes traffic accidents, and injuries to other drivers and passengers.
Schmidt Ocean Institute 2018 Annual ReportEric Schmidt
Schmidt Ocean Institute 2018 Annual Report (Short Version) https://schmidtocean.org/about/annual-reports/
Falkor Deep Sea Oceanography Research Conservation Eric and Wendy Schmidt
Reckless driving is defined as a mental state which shows a neglect for the rules of the road. This type of behavior quite often causes traffic accidents, and injuries to other drivers and passengers.
Schmidt Ocean Institute 2018 Annual ReportEric Schmidt
Schmidt Ocean Institute 2018 Annual Report (Short Version) https://schmidtocean.org/about/annual-reports/
Falkor Deep Sea Oceanography Research Conservation Eric and Wendy Schmidt
Psychrophilic (cold-adapted) microorganisms make a major contribution
to Earth’s biomass and perform critical roles in global biogeochemical cycles.
The vast extent and environmental diversity of Earth’s cold biosphere
has selected for equally diverse microbial assemblages that can include archaea,
bacteria, eucarya, and viruses. Underpinning the important ecological
roles of psychrophiles are exquisite mechanisms of physiological adaptation.
Evolution has also selected for cold-active traits at the level of molecular
adaptation, and enzymes from psychrophiles are characterized by specific
structural, functional, and stability properties. These characteristics of enzymes
from psychrophiles not only manifest in efficient low-temperature
activity, but also result in a flexible protein structure that enables biocatalysis
in nonaqueous solvents. In this review, we examine the ecology of Antarctic
psychrophiles, physiological adaptation of psychrophiles, and properties of
cold-adapted proteins, and we provide a view of how these characteristics
inform studies of astrobiology.
The International Journal of Engineering & Science is aimed at providing a platform for researchers, engineers, scientists, or educators to publish their original research results, to exchange new ideas, to disseminate information in innovative designs, engineering experiences and technological skills. It is also the Journal's objective to promote engineering and technology education. All papers submitted to the Journal will be blind peer-reviewed. Only original articles will be published.
Greetings all,
This month’s newsletter is devoted to Data Assimilation and its techniques and progress for operational oceanography.
Gary Brassington is first introducing this newsletter with a paper telling us about the international summer school for “observing,
assimilating and forecasting the ocean” which will be held in Perth, Western Australia in 11-22 January 2010
(http://www.bom.gov.au/bluelink/summerschool/). The course curriculum will include topics covering the leading edge science in
ocean observing systems, as well as the latest methods and techniques for analysis, data assimilation and ocean modeling.
Scientific articles about Data Assimilation are then displayed as follows: The first article by Broquet et al. is dealing with Ocean
state and surface forcing correction using the ROMS-IS4DVAR Data Assimilation System. Then, Cosme et al. are describing the
SEEK smoother as a Data Assimilation scheme for oceanic reanalyses. The next article by Brankart et al. is displaying a synthetic
literature review on the following subject: Is there a simple way of controlling the forcing function of the Ocean? Then Ferry et al.
are telling us about Ocean-Atmosphere flux correction by Ocean Data Assimilation. The last article by Oke et al. is dealing with
Data Assimilation in the Australian BlueLink System.
The next October 2009 newsletter will review the current work on ocean biology and biogeochemistry.
We wish you a pleasant reading!
Considerations on the collection of data from bio-argo floats across sampling...SeaBirdScientific
Ian D. Walsh, Ph. D, Joel Reiter, Dan Quittman, David J. Murphy, Thomas O. Mitchell, Ph.D. Sea-Bird Scientific. GAIC 2015 Meeting, Galway, Ireland, 14 – 18 Sept. 2015.
ABSTRACT
The flexibility of the current generation of float sensor packages peovides an opportunity to craft mission specific sampling schemes that balance the collection of data for specific sampling goals with the practicalities of float operation. Autonomous floats operate within constraints of battery life and data transfer rates.
For simplicity of data transfer and handling, most float data sets are transmitted after binning on pressure. Within a given pressure bin different instruments will be sampling within a particular defined sequence. A sampling sequence should be balanced towards minimizing energy consumption while maximizing data accuracy of each instrument. As the number of sensors increases and the breadth of mission parameters expands it becomes more difficult to optimize data sequencing and reporting.
We consider methods to reduce the size of the problem by setting rules for sequence development and test those rules relative to field data. We examine a set of data from a float that was equipped with internal memory that captured the full set of sample data taken during the profiling mission.
Comparing the ‘raw’ data and the transmitted data we examine the variance around the transmitted data and discuss the impact of data sequencing on the data.
Long-term stability of a moored optical oxygen sensor in an estuarySeaBirdScientific
Project Goal: Assess the long-term, undisturbed
performance of the SBE63 optical oxygen sensor in a
high fouling coastal environment over a two-year
period. Results indicate stability within +/- 2% in the
field.
• Instrument left on the mooring for 2 years without removal, cleaning,
or servicing
• Test site was a shallow nearshore estuarine environment at Shilshole
Marina, north of Seattle, WA USA
• Test site visited periodically with water samples and CTD profiles
collected for field validation of mooring
Oil in water fluorescence and backscattering relationshipsSeaBirdScientific
Ian Walsh
Sea-Bird Scientific Ocean Research
Brian Robinson
Fisheries and Oceans Canada, Bedford Institute of Oceanography
John Koegler
Sea-Bird Scientific Ocean Research
Robyn Conmy
3USEPA/NRMRL/LRPCD
February, 2016
In-situ tracking of oil from the Deepwater Horizon oil spill using spectral f...SeaBirdScientific
Corey Koch, Paula Coble,2Leslie Slasor,3Joseph Needoba,3Andrew Barnard,1Scott Pegau4
1-WET Labs Inc. Philomath OR. 2-University of South Florida, St. Petersburg FL. 3-Oregon Health and Sciences University, Portland, OR. 4-Oil Spill Recovery Institute, Cordova, AK.
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
This pdf is about the Schizophrenia.
For more details visit on YouTube; @SELF-EXPLANATORY;
https://www.youtube.com/channel/UCAiarMZDNhe1A3Rnpr_WkzA/videos
Thanks...!
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
The increased availability of biomedical data, particularly in the public domain, offers the opportunity to better understand human health and to develop effective therapeutics for a wide range of unmet medical needs. However, data scientists remain stymied by the fact that data remain hard to find and to productively reuse because data and their metadata i) are wholly inaccessible, ii) are in non-standard or incompatible representations, iii) do not conform to community standards, and iv) have unclear or highly restricted terms and conditions that preclude legitimate reuse. These limitations require a rethink on data can be made machine and AI-ready - the key motivation behind the FAIR Guiding Principles. Concurrently, while recent efforts have explored the use of deep learning to fuse disparate data into predictive models for a wide range of biomedical applications, these models often fail even when the correct answer is already known, and fail to explain individual predictions in terms that data scientists can appreciate. These limitations suggest that new methods to produce practical artificial intelligence are still needed.
In this talk, I will discuss our work in (1) building an integrative knowledge infrastructure to prepare FAIR and "AI-ready" data and services along with (2) neurosymbolic AI methods to improve the quality of predictions and to generate plausible explanations. Attention is given to standards, platforms, and methods to wrangle knowledge into simple, but effective semantic and latent representations, and to make these available into standards-compliant and discoverable interfaces that can be used in model building, validation, and explanation. Our work, and those of others in the field, creates a baseline for building trustworthy and easy to deploy AI models in biomedicine.
Bio
Dr. Michel Dumontier is the Distinguished Professor of Data Science at Maastricht University, founder and executive director of the Institute of Data Science, and co-founder of the FAIR (Findable, Accessible, Interoperable and Reusable) data principles. His research explores socio-technological approaches for responsible discovery science, which includes collaborative multi-modal knowledge graphs, privacy-preserving distributed data mining, and AI methods for drug discovery and personalized medicine. His work is supported through the Dutch National Research Agenda, the Netherlands Organisation for Scientific Research, Horizon Europe, the European Open Science Cloud, the US National Institutes of Health, and a Marie-Curie Innovative Training Network. He is the editor-in-chief for the journal Data Science and is internationally recognized for his contributions in bioinformatics, biomedical informatics, and semantic technologies including ontologies and linked data.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
Advances in bio-optical sensing on robotic platforms to elucidate ecosystem production in the interior ocean
1. Ian D. Walsh Sea-Bird Scientific,
Nick Hardman-Mountford, CSIRO
Francois Dufois, CSIRO
Bozena Wojtasiewicz, CSIRO
Dirk Slawinski, CSIRO
David J. Murphy, Sea-Bird Scientific
ABSTRACT
The global view of ocean productivity has been defined for the past three decades by satellite-derived images of optical properties
of the ocean’s surface layer. Yet in most of the ocean, zones of enhanced phytoplankton production and nutrient recycling are
located at depths below the view of optical satellites. In the subtropical gyres, the almost ubiquitous deep chlorophyll maximum is
often located at depths exceeding 100m, along density interfaces at a boundary between the down welling light flux and upward
transport of nutrients. Below the chlorophyll maximum heterotrophic production is the dominant process resulting in strong oxygen
consumption and dissolved nutrient regeneration. Observing the physical forcing and biogeochemical dynamics that drive this
system at the relevant time scales ranging from the diel to the seasonal has been a long-standing challenge in oceanography. In
particular, measuring the processes occurring through perturbations to relaxation has often been more happenstance than design.
In this presentation we describe advances in sensor systems deployed on autonomous robotic profilers to quantify carbon, oxygen
and nutrient cycling within the interior ocean and present examples from the subtropical Indian Ocean and western Mediterranean.
NAVIS BGC float 0028 after
deployment in the Western
Mediterranean. The ECO
Triplet is visible on the upper
right side of the float. Photo by
Christoph Gerigk.
Biogeochemical Floats
Autonomous ARGO floats have proven to be reliable and economical vehicles for
collecting data from remote locations and on a world wide scale. As the float
technology has proven itself, the range of biogeochemical sensors installed on floats
has rapidly expanded.
IS44A-2352: Advances in bio-optical sensing on robotic platforms
to elucidate ecosystem production in the interior ocean
AGU Ocean Sciences Meeting
New Orleans
22 – 26 February 2016
ian@wetlabs.com
nick.hardman-mountford@csiro.au
Francois.Dufois@csiro.au
Bozena.Wojtasiewicz@csiro.au
Dirk.Slawinski@csiro.au
dmurphy@seabird.com
1
9/23/12
245
2/14/14
Locations of the floats discussed in this poster. The
Indian Ocean floats are still functioning. The
Western Mediterranean float ran out of battery
power after 245 profiles.
Indian Ocean Eddies: Profiles in Warm Core (Anticyclonic) and Cold Core (Cyclonic) Rings
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Western Mediterranean: Physical and Biological Response to a water column overturn event
Floats have also increased in mission flexibility,
with the ability to perform complex mission plan
sequences. Floats can also be reprogrammed after
release with new mission sequences to, for example,
increase the time the float spends in an eddy
structure.
Sensors:
CTD, DO, Backscattering,
Chlorophyll, FDOM, PAR, NO3, pH
Float data presented here is raw
data with minimal processing.
Adjustments have not been made
for expected drift in the pH and
NO3 sensors. Note that profiles
were made on a nominal four
times a day schedule and have
variable depths. The NO3 data
is collected at a lower rate to
reduce total power consumption.
Float 528 was deployed in the cold core ring located in the center of the SST plot while Float 391 was deployed in the warm core ring in the
upper right of the SST plot. The MODIS chlorophyll image shows the dramatic difference in surface chlorophyll concentration within each
eddy. While surface chlorophyll concentration is much lower in the warm core ring, the rapid profiling of the float captures diel cycles in
the physical (T,S) and biological (Chl, NO3) parameters, particularly in the deep chlorophyll maximum.
Profiles just before (93) and after an overturn event in the Western Mediterranean off the Gulf of Lyon.
The overturn event acts as a boundary condition that allows for rate calculations of net changes in
biogeochemical parameters in the upper water column. Trend data are the averages in the upper 200 m.
Acknowledgements: Funding for CSIRO provided through the Australia-India Strategic Research Fund, OCE Postdoctoral fellowship
scheme and Antarctic Climate and Ecosystems Cooperative Research Centre.
0"
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35.5$
35.52$
35.54$
35.56$
35.58$
35.6$
35.62$
35.64$
35.66$
35.68$
35.7$
35.72$
0$ 0.5$ 1$ 1.5$ 2$
Pressuer&(dBar)&
Chlorphyll&(fl.)&ug/l&
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Pressuer&(dBar)&
Backsca.ering&700&nm&(Beta,&m71&sr71)&&
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Diel Data : Float 391
Four consecutive profiles by float 391 demonstrate coherence between chlorophyll,
particles (as backscattering) and the nutricline (as NO3). Note that vertical excursions are
mostly due to variability of the density field, using the salinity as a proxy for density.