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Dr Poonam K Panjwani
Dept of Pathology, TMH
 Technique to identify cellular or tissue constituents
(ANTIGENS) by means of ANTIGEN – ANTIBODY interactions.
 Used to diagnose the type of cancer and to help determine
the patient's prognosis or as a predictive marker of
therapeutic response.
 Protein, carbohydrate or lipid molecule on a cell surface
which bears one or more binding sites for antibodies.
 These binding sites are highly specific regions made up of
small number of amino-acids or monosaccharide units
 Group of serum proteins known as Immunoglobulins (Ig’s)
 Synthesised by plasma cells
 5 types – IgG,IgA,IgD,IgM,IgE
 Most common - IgG (used in IHC too)
 Antigenic epitope combines with a specific binding site on
amino acid chains of antibodies.
 Ag-Ab complexes are held together by a combination of
hydrogen bonds,electrostatic forces and van der Waal’s forces
Polyclonal Ab’s Monoclonal Ab’s
 Produced when a host
animal like mouse/rabbit is
injected with a purified
antigen
 Multiple types of Ab’s
produced
 Produced when a specific
antibody is produced for a
specific epitope
 Produced by a single B-cell
line called a clone
 Mouse/rabbit injected with purified Ag and Abs are produced
against the Ag
 After large number of Abs produced, animal is killed and
spleen is removed as it contains large no of B-lymphocytes
 This B-cell suspension is mixed with myeloma cells in a
medium which will cause cells to fuse ---- Hybridoma
 Antigen – Antibody reactions are detected on tissues with the
help of chromogens like: DAB (3,3 diamino benzidine
tetrahydrochloride) or AEC (3 amino-9-ethyl carbazole)
 DAB – insoluble in alcohol
 AEC- soluble in alcohol, so water medium like glycerin used
for mounting - temporary
 These are substances which when incubated with a suitable
chromogen produce a stable coloured end product which can
be visualised on light microscopy.
 Various different types of labels can be used.
I . ENZYMES :
 Horseradish peroxidase – reacts with DAB – Brown colour
 3 amino-9-ethylcarbazole – Red colour
 Calf intestinal alkaline phosphatase – blue and red colour
with chromogens called Fast blue BB and Fast red TR resp
 Glucose oxidase
II . COLLOIDAL METALS:
Colloidal gold – pink colour ; silver
precipitation recation used
III. FLUORESCENT LABELS :
FITC (Fluorescein isothiocyanate), tetramethyl
rhodamine isothiocyanate – require fluorescent microscope for
visualisation.
IV . RADIOLABELS :
Needs radiographic facilities.
 Direct method
 Indirect method
 Peroxidase antiperoxidase method
 Avidin-Biotin Complex method
 Polymer method
Direct method
Indirect method
PAP method
Avidin-Biotin complex method
 Polymer technology :
Consists of an integrated polymer of active enzyme
and secondary antibody that binds to a primary
antibody target.
This integrated format introduces significantly more
enzyme at the site of localization, thereby generating
a greater reaction with the subsequent chromogen,
compared with a secondary antibody directly
conjugated with enzyme.
Detection system
Primary Antibody
Tissue section
with antigen
Anti
gen
Primary Antibody
Labeled
Secondary
Antibody
Cell with antigens on surface
Anti
gen
B
B
PX
PX
PX
B
Avidin Biotin
Complex/ Polymer
DAB+H2O2
IHC
Primary Antibody
Labeled
Secondary
Antibody
Cell with antigens on surface
Detection system
Chromogen
 Manual
 Automated
Ideal Fixative :
 Gives good morphological preservation
 Doesn’t destroy the immuno-reactivity of the Ag
 Prevents extraction, diffusion and displacement of the Ag during
procedural steps after fixation
 Doesn’t interfere with the subsequent Ag-Ab reactions employed in
the localisation of the Ag.
 Preferred fixative - 10% neutral buffered formalin
 Slides may be coated with Poly-L-Lysine (PLL) or APES (3-
aminopropyltriethoxysilane) before tissue sections are taken
onto them. This ensures a better fixation of sections on the
slides during all the steps of staining. Commercially available
coated slides can be used.
 Alternatively, slides may be heat-fixed well in advance of
staining.
 Many WBCs, RBCs, muscle cells contain peroxidase. It is
important to block this activity if peroxidase based system
(PAP) is used
 Peroxidase blocking done by pre-incubation with 0.3% H2O2
for 10-30 minutes at room temp.
 Endogenous alkaline phosphatase can be blocked by
levamisole , 20% acetic acid or 0.3% H2O2
 Non specific binding occurs as Abs are charged molecules
and they can react with substances in tissue bearing the
reciprocal charge (eg: collagen)
 This blocking is done to block unwanted sites before adding
primary Ab
 Blocking serum consists of dilute serum from the same
species of animals used to produce the secondary Ab
 Protein in the serum binds the charged sites in tissue and
doesn’t interfere/participate in the Ag-Ab reaction during
immunostaining
 Most Ag get partially or extensively masked after
formalin fixation due to the cross linking of amino
acid groups.
 2 methods commonly used to retrieve Ag from tissue
are :
i. Proteolytic enzymes
ii. Heat retrieval
 Sections are exposed to enzymes like trypsin,
protease, proteinase K or pronase for 10-15 min
 Enzyme cleaves the protein links allowing the epitope
to return to its normal confirmation enabling more
effective Ab binding
 After deparaffinizing and rehydrating tissue sections, slides
are immersed in an aqueous solution called the ‘retreival
solution’ and heated
 This leads to breaking of the formalin induced cross links and
exposes the epitope of the Ag to the Ab
 Commonly used solutions are :
i. Citrate buffer at a pH of 6.0
ii. EDTA buffer at a pH of 8.0
iii. TRIS-EDTA buffer at a pH of 9.0
 Various methods of heating :
Microwave processing
Pressure cooker
Water bath/steamer
 Combination of enzyme and heat retrieval can also be used
(esp if 2-3 Ag’s are being labelled together)
 Positive control – Slide which contains a tissue known to have
the Ag under study
 Positive control slide processed exactly like the sample to be
tested
 Negative control – Additional section of the test slide on
which the primary Ab is not added. Rest steps are same. It
helps to differentiate positive staining from non-specific
background staining
CYTOKERATIN
CD3
CD20
 Deparaffinize in xylene with agitation
 Ag retreival (enzyme/heat)
 Blocking - 0.3% H2O2
 Primary Ab- Incubation
 Secondary Ab – Incubation
 Add chromogen DAB
 Stain with Haematoxylin (light) counterstain
Titration is a must
Date Antibody
Used
Dilution Appropriate
dilution
Remarks
04-04-23 CD20 1:50 1:100
1:200
1:100 GOOD
05-05-23 CD3 1:100
1:200
1:300
1:200 BEST
Validation of new antibody
Antibody_CD138______ Clone M115 CodeNo._M7228
Vendor _ ___ Batch/Lot No._00037097__________
Comments:
Sign: Date:
S.N0 BLOCK MANUFACT.DILn. REMARKS
PATH NO. TISSUE 1:50
1 22320CW “ Satisfactory.
2 22210CW “ Satisfactory
3 18083CW “ Satisfactory
4 14597CS “ Satisfactory
Making the required entries
Blocks are cut in routine manner
Tissue sections on
poly-L-lysine
coated slides
Bind Primary antibody
Wash
Biotinylated 2nd
antibody
Wash
Chromogen development
Counterstain dehydrate
coverslip examine
Block non-sp
binding
Deparaffinize
Xylene
Block
endogenous
peroxidase
Antigen Retrieval
 Proteolytic enzyme methods
 Heat induced epitope retrieval
Microwave
Pressure cooker
Achieving the desired temperature
pH of buffer- calibration
Holding times
Slides immersed in buffer solution
After opening make 20
aliquots of 50 microlitre each
Antibody dilution chart Date 10/06/2023
Antibody Dilution
1 CD20 1:100
2 MPO 1:300
3 CD23 1:100
4 ER 1:50
Making the dilutions of antibodies with buffer/diluent
Washings and wiping
Primary antibody on slide
Incubation in humidity chambers
Coloured visual product demonstrating an antigen antibody
reaction:
 Brown colour (DAB)
 Red colour (PAP-APAAP)
 Greenish yellow in immunofluorescence
 Knowledge of Ag location is a must
 Knowledge of pattern of staining is essential
 Cytoplasmic (diffuse,paranuclear, perinuclear)
 Nuclear (diffuse, nucleolar)
 Membranous (Continuous, broken)
 Interstitial
 The cell of interest (larger tumor cell etc)
CD20 CD3
CD23 bcl2
CD15
CD20
CD163
CD30
No, beware!
 Background staining
 False positivity including artifacts
 Hydrophobic and electrostatic interactions
 Endogenous peroxidase
 Endogenous biotin
 Antigen diffusion
 Antigen retrieval
 Polyclonal antibody
 Necrotic tissue
 p63 positivity in B-cell lymphomas
 C-kit positivity in nasopharyngeal carcinomas
 Aberrant CD4 in myeloid leukemias
 CD138 in myelomas and carcinomas
 ……….and the list goes on and on……..
 Endogenous peroxidase activity
 Non specific background staining
 Artefacts – precipitates, tissue artefacts, crushing, necrosis,
haemorrhage
 Failure of technique – always do with positive & negative
controls.
Polyclonal antibody Necrotic tissue
kappa light chain lambda light chain
 Cross reactivity due to epitope sharing may result in false
positivity
 An example is CD79a, a B cell marker cross reacts with
smooth muscle
 Error in data entry and mislabelling (MyoD1 and Mib1)
 Edge and trapping artefacts
 Desquamation artefacts
 Bubble artefacts
 Drying artefacts
 Artefacts of poor fixation
 Precipitated DAB artefacts
 Biotin artefacts
 Do not call an immunostain negative without
checking out the positive controls
 Remember the best control is positive internal
control
Breast Cancer Negative hormonal markers
Positive ER Positive PR
 Vimentin immunostain used to decide the
immunoreactivity/preservation of antigenicity of tissue.
 Vimentin is virtually present in all tissues and even smallest of
biopsies usually show some vimentin reactivity, if well
preserved
 Standardised procedures
 Validated antibodies
 Sensitivities and specificities of antibodies
 Accurate, reproducible and comparable results
 Checkpoints for corrective actions
 Continuous monitoring and improvement
Quality
control In
IHC
Pre-
analytical
Fixation
Processing
Embedding& cutting
Pretreatment
Analytical
Pre-staining
Staining
Post-staining
Post-
analytical
Choice of markers
Interpretation
 Ensure optimal, timely fixation, use standard reagents, freshly
prepared
 Calibrated and well maintained instruments
 Optimize antigen retrieval
 Validate antibody (Pos and Neg controls)
 Adhere to Standard operating procedures
 Audit and corrective actions
 External quality assurance programs
AUTOMATION
wwwwwwwwwwwwwwwww
wwwwwwwwwwwwwwwww
wwwwwwwwwwwwwwwww
wwwwwwwwwww
System Control Center
Staining Module
Waste System
Automated Fluidics
Module (AFM)
EZ PREP
HEAT PADS
Deparaffinisation
HRP
Diaminobenzidine Brown
DAB Brown
DAB Brown DAB Brown
Endogenous Peroxidase
H2O2
Liquid Coverslip
Ensures complete slide coverage
Prevents tissue drying artifact
Maintains reaction environment and volume
Slide
Liquid Coverslip
Tissue
Aqueous Layer
LCS
CC1
Round cell tumour Round cell tumour
Round cell tumour,
Neuroblastoma
Round cell tumour,
Ewing sarcoma
NKX2.2
chromogranin
CD20
 Cell lineage and tissue type – typing of neoplasms
 Prognostic markers
 Quantification; it is no longer enough that the 'stain' is there;
rather it is a question of 'How much is there?'
 Predictive markers for targeted therapy
 Benign conditions like infections (HSV, CMV, HPV etc)
 All the technical staff in IHC laboratory
 My colleagues – Dr Katha Rabade, Dr Santosh Menon, Dr
Tanuja Shet
 Dr Sumeet Gujral and the whole organizing team
9_Dr  Poonam Panjwani Basic principles of IHC.pptx

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9_Dr Poonam Panjwani Basic principles of IHC.pptx

  • 1. Dr Poonam K Panjwani Dept of Pathology, TMH
  • 2.  Technique to identify cellular or tissue constituents (ANTIGENS) by means of ANTIGEN – ANTIBODY interactions.  Used to diagnose the type of cancer and to help determine the patient's prognosis or as a predictive marker of therapeutic response.
  • 3.  Protein, carbohydrate or lipid molecule on a cell surface which bears one or more binding sites for antibodies.  These binding sites are highly specific regions made up of small number of amino-acids or monosaccharide units
  • 4.  Group of serum proteins known as Immunoglobulins (Ig’s)  Synthesised by plasma cells  5 types – IgG,IgA,IgD,IgM,IgE  Most common - IgG (used in IHC too)
  • 5.
  • 6.  Antigenic epitope combines with a specific binding site on amino acid chains of antibodies.  Ag-Ab complexes are held together by a combination of hydrogen bonds,electrostatic forces and van der Waal’s forces
  • 7. Polyclonal Ab’s Monoclonal Ab’s  Produced when a host animal like mouse/rabbit is injected with a purified antigen  Multiple types of Ab’s produced  Produced when a specific antibody is produced for a specific epitope  Produced by a single B-cell line called a clone
  • 8.  Mouse/rabbit injected with purified Ag and Abs are produced against the Ag  After large number of Abs produced, animal is killed and spleen is removed as it contains large no of B-lymphocytes  This B-cell suspension is mixed with myeloma cells in a medium which will cause cells to fuse ---- Hybridoma
  • 9.  Antigen – Antibody reactions are detected on tissues with the help of chromogens like: DAB (3,3 diamino benzidine tetrahydrochloride) or AEC (3 amino-9-ethyl carbazole)  DAB – insoluble in alcohol  AEC- soluble in alcohol, so water medium like glycerin used for mounting - temporary
  • 10.  These are substances which when incubated with a suitable chromogen produce a stable coloured end product which can be visualised on light microscopy.  Various different types of labels can be used.
  • 11. I . ENZYMES :  Horseradish peroxidase – reacts with DAB – Brown colour  3 amino-9-ethylcarbazole – Red colour  Calf intestinal alkaline phosphatase – blue and red colour with chromogens called Fast blue BB and Fast red TR resp  Glucose oxidase
  • 12. II . COLLOIDAL METALS: Colloidal gold – pink colour ; silver precipitation recation used III. FLUORESCENT LABELS : FITC (Fluorescein isothiocyanate), tetramethyl rhodamine isothiocyanate – require fluorescent microscope for visualisation. IV . RADIOLABELS : Needs radiographic facilities.
  • 13.  Direct method  Indirect method  Peroxidase antiperoxidase method  Avidin-Biotin Complex method  Polymer method
  • 18.  Polymer technology : Consists of an integrated polymer of active enzyme and secondary antibody that binds to a primary antibody target. This integrated format introduces significantly more enzyme at the site of localization, thereby generating a greater reaction with the subsequent chromogen, compared with a secondary antibody directly conjugated with enzyme.
  • 21. Anti gen B B PX PX PX B Avidin Biotin Complex/ Polymer DAB+H2O2 IHC Primary Antibody Labeled Secondary Antibody Cell with antigens on surface Detection system Chromogen
  • 23.
  • 24. Ideal Fixative :  Gives good morphological preservation  Doesn’t destroy the immuno-reactivity of the Ag  Prevents extraction, diffusion and displacement of the Ag during procedural steps after fixation  Doesn’t interfere with the subsequent Ag-Ab reactions employed in the localisation of the Ag.  Preferred fixative - 10% neutral buffered formalin
  • 25.  Slides may be coated with Poly-L-Lysine (PLL) or APES (3- aminopropyltriethoxysilane) before tissue sections are taken onto them. This ensures a better fixation of sections on the slides during all the steps of staining. Commercially available coated slides can be used.  Alternatively, slides may be heat-fixed well in advance of staining.
  • 26.  Many WBCs, RBCs, muscle cells contain peroxidase. It is important to block this activity if peroxidase based system (PAP) is used  Peroxidase blocking done by pre-incubation with 0.3% H2O2 for 10-30 minutes at room temp.  Endogenous alkaline phosphatase can be blocked by levamisole , 20% acetic acid or 0.3% H2O2
  • 27.  Non specific binding occurs as Abs are charged molecules and they can react with substances in tissue bearing the reciprocal charge (eg: collagen)  This blocking is done to block unwanted sites before adding primary Ab  Blocking serum consists of dilute serum from the same species of animals used to produce the secondary Ab  Protein in the serum binds the charged sites in tissue and doesn’t interfere/participate in the Ag-Ab reaction during immunostaining
  • 28.  Most Ag get partially or extensively masked after formalin fixation due to the cross linking of amino acid groups.  2 methods commonly used to retrieve Ag from tissue are : i. Proteolytic enzymes ii. Heat retrieval
  • 29.  Sections are exposed to enzymes like trypsin, protease, proteinase K or pronase for 10-15 min  Enzyme cleaves the protein links allowing the epitope to return to its normal confirmation enabling more effective Ab binding
  • 30.  After deparaffinizing and rehydrating tissue sections, slides are immersed in an aqueous solution called the ‘retreival solution’ and heated  This leads to breaking of the formalin induced cross links and exposes the epitope of the Ag to the Ab
  • 31.  Commonly used solutions are : i. Citrate buffer at a pH of 6.0 ii. EDTA buffer at a pH of 8.0 iii. TRIS-EDTA buffer at a pH of 9.0  Various methods of heating : Microwave processing Pressure cooker Water bath/steamer  Combination of enzyme and heat retrieval can also be used (esp if 2-3 Ag’s are being labelled together)
  • 32.  Positive control – Slide which contains a tissue known to have the Ag under study  Positive control slide processed exactly like the sample to be tested  Negative control – Additional section of the test slide on which the primary Ab is not added. Rest steps are same. It helps to differentiate positive staining from non-specific background staining
  • 34.  Deparaffinize in xylene with agitation  Ag retreival (enzyme/heat)  Blocking - 0.3% H2O2  Primary Ab- Incubation  Secondary Ab – Incubation  Add chromogen DAB  Stain with Haematoxylin (light) counterstain
  • 35.
  • 36. Titration is a must Date Antibody Used Dilution Appropriate dilution Remarks 04-04-23 CD20 1:50 1:100 1:200 1:100 GOOD 05-05-23 CD3 1:100 1:200 1:300 1:200 BEST
  • 37. Validation of new antibody Antibody_CD138______ Clone M115 CodeNo._M7228 Vendor _ ___ Batch/Lot No._00037097__________ Comments: Sign: Date: S.N0 BLOCK MANUFACT.DILn. REMARKS PATH NO. TISSUE 1:50 1 22320CW “ Satisfactory. 2 22210CW “ Satisfactory 3 18083CW “ Satisfactory 4 14597CS “ Satisfactory
  • 38.
  • 40. Blocks are cut in routine manner
  • 42. Bind Primary antibody Wash Biotinylated 2nd antibody Wash Chromogen development Counterstain dehydrate coverslip examine Block non-sp binding Deparaffinize Xylene Block endogenous peroxidase Antigen Retrieval
  • 43.  Proteolytic enzyme methods  Heat induced epitope retrieval Microwave Pressure cooker Achieving the desired temperature pH of buffer- calibration Holding times
  • 44. Slides immersed in buffer solution
  • 45.
  • 46.
  • 47.
  • 48.
  • 49. After opening make 20 aliquots of 50 microlitre each
  • 50.
  • 51.
  • 52. Antibody dilution chart Date 10/06/2023 Antibody Dilution 1 CD20 1:100 2 MPO 1:300 3 CD23 1:100 4 ER 1:50
  • 53. Making the dilutions of antibodies with buffer/diluent
  • 56.
  • 58. Coloured visual product demonstrating an antigen antibody reaction:  Brown colour (DAB)  Red colour (PAP-APAAP)  Greenish yellow in immunofluorescence
  • 59.
  • 60.
  • 61.  Knowledge of Ag location is a must  Knowledge of pattern of staining is essential  Cytoplasmic (diffuse,paranuclear, perinuclear)  Nuclear (diffuse, nucleolar)  Membranous (Continuous, broken)  Interstitial  The cell of interest (larger tumor cell etc)
  • 63. CD15
  • 65. CD30
  • 67.  Background staining  False positivity including artifacts
  • 68.  Hydrophobic and electrostatic interactions  Endogenous peroxidase  Endogenous biotin  Antigen diffusion  Antigen retrieval  Polyclonal antibody  Necrotic tissue
  • 69.  p63 positivity in B-cell lymphomas  C-kit positivity in nasopharyngeal carcinomas  Aberrant CD4 in myeloid leukemias  CD138 in myelomas and carcinomas  ……….and the list goes on and on……..
  • 70.  Endogenous peroxidase activity  Non specific background staining  Artefacts – precipitates, tissue artefacts, crushing, necrosis, haemorrhage  Failure of technique – always do with positive & negative controls.
  • 72. kappa light chain lambda light chain
  • 73.  Cross reactivity due to epitope sharing may result in false positivity  An example is CD79a, a B cell marker cross reacts with smooth muscle  Error in data entry and mislabelling (MyoD1 and Mib1)
  • 74.  Edge and trapping artefacts  Desquamation artefacts  Bubble artefacts  Drying artefacts  Artefacts of poor fixation  Precipitated DAB artefacts  Biotin artefacts
  • 75.
  • 76.
  • 77.
  • 78.  Do not call an immunostain negative without checking out the positive controls  Remember the best control is positive internal control
  • 79. Breast Cancer Negative hormonal markers Positive ER Positive PR
  • 80.  Vimentin immunostain used to decide the immunoreactivity/preservation of antigenicity of tissue.  Vimentin is virtually present in all tissues and even smallest of biopsies usually show some vimentin reactivity, if well preserved
  • 81.  Standardised procedures  Validated antibodies  Sensitivities and specificities of antibodies  Accurate, reproducible and comparable results  Checkpoints for corrective actions  Continuous monitoring and improvement
  • 83.  Ensure optimal, timely fixation, use standard reagents, freshly prepared  Calibrated and well maintained instruments  Optimize antigen retrieval  Validate antibody (Pos and Neg controls)  Adhere to Standard operating procedures  Audit and corrective actions  External quality assurance programs
  • 85.
  • 87.
  • 88. System Control Center Staining Module Waste System Automated Fluidics Module (AFM)
  • 90. HRP Diaminobenzidine Brown DAB Brown DAB Brown DAB Brown Endogenous Peroxidase H2O2
  • 91. Liquid Coverslip Ensures complete slide coverage Prevents tissue drying artifact Maintains reaction environment and volume Slide Liquid Coverslip Tissue Aqueous Layer LCS CC1
  • 92.
  • 93.
  • 94.
  • 95. Round cell tumour Round cell tumour
  • 96. Round cell tumour, Neuroblastoma Round cell tumour, Ewing sarcoma NKX2.2 chromogranin
  • 97.
  • 98. CD20
  • 99.  Cell lineage and tissue type – typing of neoplasms  Prognostic markers  Quantification; it is no longer enough that the 'stain' is there; rather it is a question of 'How much is there?'  Predictive markers for targeted therapy  Benign conditions like infections (HSV, CMV, HPV etc)
  • 100.
  • 101.  All the technical staff in IHC laboratory  My colleagues – Dr Katha Rabade, Dr Santosh Menon, Dr Tanuja Shet  Dr Sumeet Gujral and the whole organizing team