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TITULO PRINCIPAL
LUIS FELIPE ÁLVAREZ HERNÁNDEZ
MARÍA CAMILA ZAPATA VÁSQUEZ
Introduction
Salmonella
Bacteria gram-negative
bacillus
Affects intestinal tract of humans and
other animals
invading the epithelial cells of the small
intestine and macrophages
Range from 0.7 to 1.5 µm
in diamater and from 2 to
5 µm in length.
They possess flagella
which project in all
directions and enable
them to move around.
Rod-shaped
Three-layers:
- outer membrane
- THIN peptidoglycan layer
- inner plasma membrane.
Salmonella
It has two species
Genus
Salmonella
bongori
Salmonella
enterica
• Enterica
• Salamae
• Arizonae
• Diarizonae
• houtenae
• indica
Belongs to the family
Enterobacteriaceae
Salmonella spreads by
• Via fecal-oral route when animals or
people pass stools
• Consuming food or drink products that
have been contaminated with bacteria
from the feces of infected people or
animals.
• Handling infected meat
• Cleaning up animal droppings and then
eating with your hands or putting your
hands in your mouth without washing
them.
• Salmonella bacteria are not spread by
coughing or sneezing
Salmonella produces
• Salmonellosis
• Thypoid fever
Historically the incidence of different
infectious diseases has been high in
Yunnan, one of the minority habitations
in China
The prevalence and incidence of S.
Paratyphi A in Yunnan since 2005 ranked
first in China where the average
incidence rate was ten times higher
compared to other provinces.
Multilocus sequence typing
(MLST) is suitable to study
the evolutionary relationships
of the pathogen.
We used PFGE and MLST including antibiotic susceptibility
tests to identify the characteristics and the molecular
features of S. Paratyphi A isolates.
Pulse-field gel electrophoresis
(PFGE) is used for pathogen
molecular typing and shows
high discriminatory power in
epidemiology investigations.
GENERAL OBJECTIVE
Study the characteristics of the molecular
epidemiology for S. Paratyphi A isolates in Yunnan
using pulsed-field gel electrophoresis (PFGE) and
the multilocus sequence typing (MLST)
Cepas Bacterianas
En el estudio se aislaron
• 349 cepas mediante hemocultivo
• 13 cepas del ambiente (agua
contaminada)
• 4 cepas de los alimentos
• Escherichia coli cepa ATCC
25922 sirvió como control.
Todas las bacterias fueron
identificadas como
Salmonella spp utilizando
Vitek Compact 2 , y lo
confirmaron con prueba
de aglutinación en suero
como S. Paratyphi A.
MATERIALES Y MÉTODOS
Se determinó la sensibilidad a los antimicrobianos de todas las cepas utilizando el método
de difusión en disco en agar Mueller-Hinton (MH)
Susceptibilidad
antimicrobiana
Los antibióticos utilizados fueron:
• Ampicilina (AMP)
• Cefotaxima (CTX)
• Ácido nalidíxico (NAL)
• Ciprofloxacina (CIP)
• Trimetoprim /sulfametoxazol (SMZ).
MATERIALES Y MÉTODOS
Pulsed-field gel
electrophoresis (PFGE)
• Is a highly discriminative molecular typing technique
that is used in epidemiological studies worldwide.
• By comparing the fingerprints of any two isolates,
one can investigate if they belong to the same strain
(i.e. the two isolates are clonal) or if they are
genetically unrelated.
• PFGE is based upon the variable migration of large
DNA restriction fragments in an electrical field of
alternating polarity.
MATERIALES Y MÉTODOS
• Is a procedure for characterizing isolates of bacterial
species using the sequences of internal fragments of
(usually) seven house-keeping genes.
• Approximately 450-500 bp internal fragments of each
gene are used, as these can be accurately sequenced on
both strands using an automated DNA sequencer.
The multilocus sequence
typing (MLST)
MATERIALES Y MÉTODOS
FIG 1
RESULTS
FIG 1
RESULTS
FIG 2
RESULTS
AUTHORS WHAT THEY SAID YES OR NO
Goh et al., 2002
During the past few years, the isolation
rates of S. Paratyphi A has increased
throughout South Asia within creased
antimicrobial drug resistance YES
Didelot et al., 2007, 2011;
McClelland et al., 2004
Furthermore, several studies showed the
genomes of S. Paratyphi A were extremely
conserved YES
DISCUSSION
AUTHORS WHAT THEY SAID YES OR NO
Lu et al., 2006; Zhou et al.,
2006; Gong et al., 2006; Fu et
al., 2011
Additionally, nalidixic acid resistant
S.Paratyphi A were found highly prevalent
in Shenzhen, China ( Wu et al., 2010 ).
YES
Chandel et al., 2000 Chandel et al. found S. Paratyphi A
resistant to chloramphenicol and
cotrimoxazole increased in India and a
portion of the strains were resistant to
ciprofloxacin
NO
DISCUSSION
1. Some bacteria such as salmonella have
evolved to avoid the effect of antibiotics but has
persisted their ability to be cloned and
transmitted in the middle
CONCLUSIONS
2. The pharmaceutical laboratories have the task
of creating new drugs or methods to counter the
resistance of microorganisms as evidenced in
this case
CONCLUSIONS
3. The bacterial strains could proliferate in
humans for bad manipulation of the food and
water, because they didn’t meet the
requirements of sanitation
CONCLUSIONS
4. S. Paratyphi A could proliferate due to poor
infrastructure, waste like feces and urine
drained in the food crops. The majority of
diseases are caused by not have a proper water
supply system
CONCLUSIONS
LUIS FELIPE ÁLVAREZ HERNÁNDEZ
MARIA CAMILA ZAPATA VÁSQUEZ
THANK YOU
Seminario: Biología Molecular

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Seminario: Biología Molecular

  • 1.
  • 2. TITULO PRINCIPAL LUIS FELIPE ÁLVAREZ HERNÁNDEZ MARÍA CAMILA ZAPATA VÁSQUEZ
  • 3. Introduction Salmonella Bacteria gram-negative bacillus Affects intestinal tract of humans and other animals invading the epithelial cells of the small intestine and macrophages Range from 0.7 to 1.5 µm in diamater and from 2 to 5 µm in length. They possess flagella which project in all directions and enable them to move around. Rod-shaped Three-layers: - outer membrane - THIN peptidoglycan layer - inner plasma membrane.
  • 4. Salmonella It has two species Genus Salmonella bongori Salmonella enterica • Enterica • Salamae • Arizonae • Diarizonae • houtenae • indica Belongs to the family Enterobacteriaceae
  • 5. Salmonella spreads by • Via fecal-oral route when animals or people pass stools • Consuming food or drink products that have been contaminated with bacteria from the feces of infected people or animals. • Handling infected meat • Cleaning up animal droppings and then eating with your hands or putting your hands in your mouth without washing them. • Salmonella bacteria are not spread by coughing or sneezing Salmonella produces • Salmonellosis • Thypoid fever
  • 6. Historically the incidence of different infectious diseases has been high in Yunnan, one of the minority habitations in China The prevalence and incidence of S. Paratyphi A in Yunnan since 2005 ranked first in China where the average incidence rate was ten times higher compared to other provinces.
  • 7. Multilocus sequence typing (MLST) is suitable to study the evolutionary relationships of the pathogen. We used PFGE and MLST including antibiotic susceptibility tests to identify the characteristics and the molecular features of S. Paratyphi A isolates. Pulse-field gel electrophoresis (PFGE) is used for pathogen molecular typing and shows high discriminatory power in epidemiology investigations.
  • 8. GENERAL OBJECTIVE Study the characteristics of the molecular epidemiology for S. Paratyphi A isolates in Yunnan using pulsed-field gel electrophoresis (PFGE) and the multilocus sequence typing (MLST)
  • 9. Cepas Bacterianas En el estudio se aislaron • 349 cepas mediante hemocultivo • 13 cepas del ambiente (agua contaminada) • 4 cepas de los alimentos • Escherichia coli cepa ATCC 25922 sirvió como control. Todas las bacterias fueron identificadas como Salmonella spp utilizando Vitek Compact 2 , y lo confirmaron con prueba de aglutinación en suero como S. Paratyphi A. MATERIALES Y MÉTODOS
  • 10. Se determinó la sensibilidad a los antimicrobianos de todas las cepas utilizando el método de difusión en disco en agar Mueller-Hinton (MH) Susceptibilidad antimicrobiana Los antibióticos utilizados fueron: • Ampicilina (AMP) • Cefotaxima (CTX) • Ácido nalidíxico (NAL) • Ciprofloxacina (CIP) • Trimetoprim /sulfametoxazol (SMZ). MATERIALES Y MÉTODOS
  • 11. Pulsed-field gel electrophoresis (PFGE) • Is a highly discriminative molecular typing technique that is used in epidemiological studies worldwide. • By comparing the fingerprints of any two isolates, one can investigate if they belong to the same strain (i.e. the two isolates are clonal) or if they are genetically unrelated. • PFGE is based upon the variable migration of large DNA restriction fragments in an electrical field of alternating polarity. MATERIALES Y MÉTODOS
  • 12.
  • 13. • Is a procedure for characterizing isolates of bacterial species using the sequences of internal fragments of (usually) seven house-keeping genes. • Approximately 450-500 bp internal fragments of each gene are used, as these can be accurately sequenced on both strands using an automated DNA sequencer. The multilocus sequence typing (MLST) MATERIALES Y MÉTODOS
  • 17. AUTHORS WHAT THEY SAID YES OR NO Goh et al., 2002 During the past few years, the isolation rates of S. Paratyphi A has increased throughout South Asia within creased antimicrobial drug resistance YES Didelot et al., 2007, 2011; McClelland et al., 2004 Furthermore, several studies showed the genomes of S. Paratyphi A were extremely conserved YES DISCUSSION
  • 18. AUTHORS WHAT THEY SAID YES OR NO Lu et al., 2006; Zhou et al., 2006; Gong et al., 2006; Fu et al., 2011 Additionally, nalidixic acid resistant S.Paratyphi A were found highly prevalent in Shenzhen, China ( Wu et al., 2010 ). YES Chandel et al., 2000 Chandel et al. found S. Paratyphi A resistant to chloramphenicol and cotrimoxazole increased in India and a portion of the strains were resistant to ciprofloxacin NO DISCUSSION
  • 19. 1. Some bacteria such as salmonella have evolved to avoid the effect of antibiotics but has persisted their ability to be cloned and transmitted in the middle CONCLUSIONS
  • 20. 2. The pharmaceutical laboratories have the task of creating new drugs or methods to counter the resistance of microorganisms as evidenced in this case CONCLUSIONS
  • 21. 3. The bacterial strains could proliferate in humans for bad manipulation of the food and water, because they didn’t meet the requirements of sanitation CONCLUSIONS
  • 22. 4. S. Paratyphi A could proliferate due to poor infrastructure, waste like feces and urine drained in the food crops. The majority of diseases are caused by not have a proper water supply system CONCLUSIONS
  • 23. LUIS FELIPE ÁLVAREZ HERNÁNDEZ