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Tumor Viruses
                                     Oncogenes &
                                     Tumor Supressor
                                     genes




Adapted from The Biology of          Karobi Moitra (Ph.D)
          Cancer
       First Edition
                                     NCI Frederick , NIH
                                     Cancer Inflammation Program
     Robert A. Weinberg
                                     Human Genetics Section
      Chapter 3, 4 & 7
                                     Frederick MD.
                                               MD.
  Copyright Ā© Garland Science 2007
Peyton Rous and Rous Sarcoma Virus (RSV)




                                      1910                  1966




Figure 3.1 The Biology of Cancer (Ā© Garland Science 2007)
1909 Rousā€™s Protocol for inducing breast sarcomas in chicken




           Viruses can cause cancer in chickens !



Figure 3.2 The Biology of Cancer (Ā© Garland Science 2007)
The Virion (virus particle) of RSV and other related viruses:
                       RNA viruses (retroviruses) can cause cancer




Figure 3.4a The Biology of Cancer (Ā© Garland Science 2007)
Structure of the RSV genome




        ALV = Avian leukosis virus                             Oncogene




Figure 3.19 The Biology of Cancer (Ā© Garland Science 2007)
The Double Helix
RNA vs DNA
The Virion (virus particle) of RSV and other related viruses:
                       RNA viruses (retroviruses) can cause cancer




Figure 3.4a The Biology of Cancer (Ā© Garland Science 2007)
RNA to DNA

Reverse transcription
  with the enzyme
reverse transcriptase
The flow of genetic information- the central dogma
Murine (mouse) Leukemia Virus particles budding from an infected cell




Figure 3.4b The Biology of Cancer (Ā© Garland Science 2007)
Normal cells can be converted into tumor cells (transformation)




Figure 3.7a The Biology of Cancer (Ā© Garland Science 2007)
Normal cells can be converted into tumor cells (transformation) :
                  RSV can transform infected cultured cells (in a petri dish)




                                                An RSV induced Foci
                                                                      CALTECH:
                                                                      Dulbecco,Rubin & Temin
Figure 3.5 The Biology of Cancer (Ā© Garland Science 2007)
Some viruses can transform normal cells




         1910              1966
                       Nobel prize in
                  Physiology and medicine
DNA Viruses can also induce cancer




                                                     Shopes virus
                                                     Richard Shope
Figure 3.9a The Biology of Cancer (Ā© Garland Science 2007)
HPV = Human papilloma virus - A DNA tumor virus



Figure 3.9b The Biology of Cancer (Ā© Garland Science 2007)
Table 3.1 The Biology of Cancer (Ā© Garland Science 2007)
Oncogenes were first discovered in viruses
   and called v-oncs , viral oncogenes
Oncogenes &
Proto-oncogenes
Genes and Cancer
                    Viruses

  Chemicals                       Radiation




           Heredity




Chemicals (e.g., from smoking), radiation, viruses, and   Chromosomes
heredity all contribute to the development of cancer by   are DNA
          triggering changes in a cellā€™s genes            molecules
Oncogenes or tumor genes are genes with potential properties for the
               induction of neoplastic transformation
                     (either in natural or experimental conditions)
                                                                      (Duesberg 1980)




Normal cellular genes with the potential to become oncogenes
                 are called proto-oncogenes
Proto-oncogene   Oncogene
Proto-Oncogenes and Normal Cell Growth
                             Normal Growth-Control Pathway

   Growth factor

         Receptor
                                                      Signaling enzymes

                                                                         Transcription
                                                                         factors

    Cell nucleus                                                                 DNA




                                                           Cell proliferation


     Oncogenes are related to normal genes called proto-oncogenes that encode components of the cellā€™s normal
     growth-control pathway. Some of these components are growth factors, receptors, signaling enzymes, and
     transcription factors. Growth factors bind to receptors on the cell surface, which activate signaling enzymes
     inside the cell that, in turn, activate special proteins called transcription factors inside the cellā€™s nucleus. The
     activated transcription factors ā€œturn onā€ the genes required for cell growth and proliferation.
Normal cell                         Normal
                                     genes
                                      regulate
                                        cell growth




                                    Oncogenes
Cancer cell                         accelerate
                                     cell growth
                                      and division




                                              Oncogenes are genes whose PRESENCE in
         Mutated/damaged oncogene               certain forms and/or overactivity can
                                                stimulate the development of cancer.
Oncogenes or tumor genes are genes with potential properties for the
              induction of neoplastic transformation
                    (either in natural or experimental conditions)
                                                                     (Duesberg 1980)




 The word oncogene comes from the word ā€˜onkos ā€˜ meaning tumor
When a proto-oncogene becomes activated it is
            called an oncogene
Proto-oncogene   Oncogene
When an oncogene becomes activated it might
              cause cancer




    Proto-oncogene -> oncogene -> other steps -> cancer
Activation of Oncogenes


1. Mutation

   a. Insertional mutagenesis

   b. Point mutagenesis


2. Amplification

3. Translocation
Mutation : A mutation is a permanent change in
the DNA sequence of a gene. Mutations in a
gene's DNA sequence can alter the amino acid
sequence of the protein encoded by the gene.
1a. Insertional Mutagenesis
          ALV provirus may become integrated with the c-myc oncogene




                                                                  ALV switches on c-myc




Figure 3.23b The Biology of Cancer (Ā© Garland Science 2007)
Activation of oncogenes



1b. Mutagenesis of oncogenes

Altered polypeptides produced by mutant oncogenes could be
related to the origin of some human tumors
Activation of oncogenes
                Mutation responsible for H-ras oncogene activtion




        Human bladder cancer oncogene - 12th codon of H-ras ,mutation
        converts glycine codon to valine codon




Figure 4.10 The Biology of Cancer (Ā© Garland Science 2007)
Activation of oncogenes


2. Amplification of oncogenes




                                More than one copy of a gene:
                                        Amplification
Activation of oncogenes
              The N-myc gene is often amplified in human childhood
                               neuroblastomas




                                                              FISH - showing amplification
                                                              of N-myc to produces HSRā€™s
                                                              homogeneous staining regions
                                                              (chromosome 2)




Figure 4.11a The Biology of Cancer (Ā© Garland Science 2007)
How are oncogenes amplified?




     Double minute chromosomes
Activation of oncogenes

 3. Translocation

A chromosome translocation is a chromosome     A karyotype is the number and appearance
abnormality caused by rearrangement of parts      of chromosomes in the nucleus of a
between nonhomologous chromosomes. A gene                     eukaryote cell
fusion may be created when the translocation
joins two otherwise separated genes, the
occurrence of which is common in cancer.
Burkitts lymphoma t(8;14) the c-myc gene is placed under the
            control of the enhancer sequence of an immunoglubulin gene




Figure 4.13a The Biology of Cancer (Ā© Garland Science 2007)
Reciprocal translocations between human Chr 9 (abl) and 22 (bcr)




                                                                               Fusion protein



                                                              Bcr-abl oncogene formation gives rise to acute lymphocytic leukemia
                                                                     (ALL),chronic myelogenous leukemia (CML) or chronic
                                                                                  neutrophillic leukemia (CNL)



Figure 4.15a The Biology of Cancer (Ā© Garland Science 2007)
Activation of Oncogenes


1. a. Insertional mutagenesis

           b. Point mutagenesis

2. Amplification

3. Translocation
Tumor Suppressor Genes
Tumor Suppressor Genes


Tumor suppressor genes are normal genes whose ABSENCE
                   can lead to cancer
       i.e. Tumor suppressor genes protect the cell
Tumor Suppressor Genes - Tumor suppressor genes are normal genes whose ABSENCE can lead to cancer
                                i.e. Tumor suppressor genes protect the cell




    Normal cell                                                     Normal
                                                                    genes
                                                                     prevent
                                                                       cancer



 Remove or inactivate
 tumor suppressor genes




     Cancer cell                                                   Damage to
                                                                   both genes
                                                                    leads to
                                                                      cancer

                       Mutated/inactivated                                     If a pair of tumor suppressor genes are either
                     tumor suppressor genes                                    lost from a cell or inactivated by mutation,
                                                                               their functional absence might allow cancer
                                                                               to develop
Tumor Suppressor Genes
                               Act Like a Brake Pedal
                                                              Tumor Suppressor
                                                                Gene Proteins
             Growth factor

                      Receptor


                                                   Signaling
                                                   enzymes                                 Transcription
                                                                                           factors
                 Cell nucleus                                                                 DNA




                                                                         Cell proliferation


Tumor suppressor genes are a family of normal genes that instruct cells to produce proteins that restrain cell growth and division. Since tumor
suppressor genes code for proteins that slow down cell growth and division, the loss of such proteins allows a cell to grow and divide in an
uncontrolled fashion. Tumor suppressor genes are like the brake pedal of an automobile. The loss of a tumor suppressor gene function is like
having a brake pedal that does not function properly, thereby allowing the cell to grow and divide continually.
Tumor suppressors act similar to the ā€˜brakesā€™ of a car (analogy)
p53 Tumor Suppressor Protein
         Triggers Cell Suicide

                                    p53 protein




Normal cell                          Excessive DNA damage                                       Cell suicide
                                                                                                (Apoptosis)

One particular tumor suppressor gene codes for a protein called ā€œp53ā€ that can trigger cell suicide (apoptosis). In cells
that have undergone DNA damage, the p53 protein acts like a brake pedal to halt cell growth and division. If the damage
cannot be repaired, the p53 protein eventually initiates cell suicide, thereby preventing the genetically damaged cell
from growing out of control.
pRB - Tumor suppressor gene




  From R Bernards
Petite arm
(small)




             NLM
Retinoblastoma occurs when pRB is mutated (inactivated)
                                   or sometimes deleted




Figure 7.4b The Biology of Cancer (Ā© Garland Science 2007)
Inherit mutant
      allele




Figure 7.7 The Biology of Cancer (Ā© Garland Science 2007)
Deletion of a part of Chromosome 13 in a retinoblastoma patient




Figure 7.10 The Biology of Cancer (Ā© Garland Science 2007)
Oncogenes or tumor genes are genes with potential properties for the
      induction of neoplastic transformation either in natural
                     or experimental conditions
                                                      (Duesberg 1980)




   Tumor suppressor genes are normal genes whose ABSENCE
                      can lead to cancer
ā€œNever, never, never give upā€
                               Winston Churchill




              1966
          Nobel prize in
     Physiology and medicine

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Biology of cancer, lecture 2 tumor viruses,oncogenes,tsgs

  • 1. Tumor Viruses Oncogenes & Tumor Supressor genes Adapted from The Biology of Karobi Moitra (Ph.D) Cancer First Edition NCI Frederick , NIH Cancer Inflammation Program Robert A. Weinberg Human Genetics Section Chapter 3, 4 & 7 Frederick MD. MD. Copyright Ā© Garland Science 2007
  • 2. Peyton Rous and Rous Sarcoma Virus (RSV) 1910 1966 Figure 3.1 The Biology of Cancer (Ā© Garland Science 2007)
  • 3. 1909 Rousā€™s Protocol for inducing breast sarcomas in chicken Viruses can cause cancer in chickens ! Figure 3.2 The Biology of Cancer (Ā© Garland Science 2007)
  • 4.
  • 5. The Virion (virus particle) of RSV and other related viruses: RNA viruses (retroviruses) can cause cancer Figure 3.4a The Biology of Cancer (Ā© Garland Science 2007)
  • 6. Structure of the RSV genome ALV = Avian leukosis virus Oncogene Figure 3.19 The Biology of Cancer (Ā© Garland Science 2007)
  • 9. The Virion (virus particle) of RSV and other related viruses: RNA viruses (retroviruses) can cause cancer Figure 3.4a The Biology of Cancer (Ā© Garland Science 2007)
  • 10. RNA to DNA Reverse transcription with the enzyme reverse transcriptase
  • 11. The flow of genetic information- the central dogma
  • 12. Murine (mouse) Leukemia Virus particles budding from an infected cell Figure 3.4b The Biology of Cancer (Ā© Garland Science 2007)
  • 13. Normal cells can be converted into tumor cells (transformation) Figure 3.7a The Biology of Cancer (Ā© Garland Science 2007)
  • 14. Normal cells can be converted into tumor cells (transformation) : RSV can transform infected cultured cells (in a petri dish) An RSV induced Foci CALTECH: Dulbecco,Rubin & Temin Figure 3.5 The Biology of Cancer (Ā© Garland Science 2007)
  • 15. Some viruses can transform normal cells 1910 1966 Nobel prize in Physiology and medicine
  • 16. DNA Viruses can also induce cancer Shopes virus Richard Shope Figure 3.9a The Biology of Cancer (Ā© Garland Science 2007)
  • 17. HPV = Human papilloma virus - A DNA tumor virus Figure 3.9b The Biology of Cancer (Ā© Garland Science 2007)
  • 18. Table 3.1 The Biology of Cancer (Ā© Garland Science 2007)
  • 19. Oncogenes were first discovered in viruses and called v-oncs , viral oncogenes
  • 21. Genes and Cancer Viruses Chemicals Radiation Heredity Chemicals (e.g., from smoking), radiation, viruses, and Chromosomes heredity all contribute to the development of cancer by are DNA triggering changes in a cellā€™s genes molecules
  • 22. Oncogenes or tumor genes are genes with potential properties for the induction of neoplastic transformation (either in natural or experimental conditions) (Duesberg 1980) Normal cellular genes with the potential to become oncogenes are called proto-oncogenes
  • 23. Proto-oncogene Oncogene
  • 24. Proto-Oncogenes and Normal Cell Growth Normal Growth-Control Pathway Growth factor Receptor Signaling enzymes Transcription factors Cell nucleus DNA Cell proliferation Oncogenes are related to normal genes called proto-oncogenes that encode components of the cellā€™s normal growth-control pathway. Some of these components are growth factors, receptors, signaling enzymes, and transcription factors. Growth factors bind to receptors on the cell surface, which activate signaling enzymes inside the cell that, in turn, activate special proteins called transcription factors inside the cellā€™s nucleus. The activated transcription factors ā€œturn onā€ the genes required for cell growth and proliferation.
  • 25. Normal cell Normal genes regulate cell growth Oncogenes Cancer cell accelerate cell growth and division Oncogenes are genes whose PRESENCE in Mutated/damaged oncogene certain forms and/or overactivity can stimulate the development of cancer.
  • 26. Oncogenes or tumor genes are genes with potential properties for the induction of neoplastic transformation (either in natural or experimental conditions) (Duesberg 1980) The word oncogene comes from the word ā€˜onkos ā€˜ meaning tumor
  • 27. When a proto-oncogene becomes activated it is called an oncogene
  • 28. Proto-oncogene Oncogene
  • 29. When an oncogene becomes activated it might cause cancer Proto-oncogene -> oncogene -> other steps -> cancer
  • 30. Activation of Oncogenes 1. Mutation a. Insertional mutagenesis b. Point mutagenesis 2. Amplification 3. Translocation
  • 31. Mutation : A mutation is a permanent change in the DNA sequence of a gene. Mutations in a gene's DNA sequence can alter the amino acid sequence of the protein encoded by the gene.
  • 32. 1a. Insertional Mutagenesis ALV provirus may become integrated with the c-myc oncogene ALV switches on c-myc Figure 3.23b The Biology of Cancer (Ā© Garland Science 2007)
  • 33. Activation of oncogenes 1b. Mutagenesis of oncogenes Altered polypeptides produced by mutant oncogenes could be related to the origin of some human tumors
  • 34. Activation of oncogenes Mutation responsible for H-ras oncogene activtion Human bladder cancer oncogene - 12th codon of H-ras ,mutation converts glycine codon to valine codon Figure 4.10 The Biology of Cancer (Ā© Garland Science 2007)
  • 35.
  • 36. Activation of oncogenes 2. Amplification of oncogenes More than one copy of a gene: Amplification
  • 37. Activation of oncogenes The N-myc gene is often amplified in human childhood neuroblastomas FISH - showing amplification of N-myc to produces HSRā€™s homogeneous staining regions (chromosome 2) Figure 4.11a The Biology of Cancer (Ā© Garland Science 2007)
  • 38. How are oncogenes amplified? Double minute chromosomes
  • 39. Activation of oncogenes 3. Translocation A chromosome translocation is a chromosome A karyotype is the number and appearance abnormality caused by rearrangement of parts of chromosomes in the nucleus of a between nonhomologous chromosomes. A gene eukaryote cell fusion may be created when the translocation joins two otherwise separated genes, the occurrence of which is common in cancer.
  • 40. Burkitts lymphoma t(8;14) the c-myc gene is placed under the control of the enhancer sequence of an immunoglubulin gene Figure 4.13a The Biology of Cancer (Ā© Garland Science 2007)
  • 41. Reciprocal translocations between human Chr 9 (abl) and 22 (bcr) Fusion protein Bcr-abl oncogene formation gives rise to acute lymphocytic leukemia (ALL),chronic myelogenous leukemia (CML) or chronic neutrophillic leukemia (CNL) Figure 4.15a The Biology of Cancer (Ā© Garland Science 2007)
  • 42. Activation of Oncogenes 1. a. Insertional mutagenesis b. Point mutagenesis 2. Amplification 3. Translocation
  • 43.
  • 45. Tumor Suppressor Genes Tumor suppressor genes are normal genes whose ABSENCE can lead to cancer i.e. Tumor suppressor genes protect the cell
  • 46. Tumor Suppressor Genes - Tumor suppressor genes are normal genes whose ABSENCE can lead to cancer i.e. Tumor suppressor genes protect the cell Normal cell Normal genes prevent cancer Remove or inactivate tumor suppressor genes Cancer cell Damage to both genes leads to cancer Mutated/inactivated If a pair of tumor suppressor genes are either tumor suppressor genes lost from a cell or inactivated by mutation, their functional absence might allow cancer to develop
  • 47. Tumor Suppressor Genes Act Like a Brake Pedal Tumor Suppressor Gene Proteins Growth factor Receptor Signaling enzymes Transcription factors Cell nucleus DNA Cell proliferation Tumor suppressor genes are a family of normal genes that instruct cells to produce proteins that restrain cell growth and division. Since tumor suppressor genes code for proteins that slow down cell growth and division, the loss of such proteins allows a cell to grow and divide in an uncontrolled fashion. Tumor suppressor genes are like the brake pedal of an automobile. The loss of a tumor suppressor gene function is like having a brake pedal that does not function properly, thereby allowing the cell to grow and divide continually.
  • 48. Tumor suppressors act similar to the ā€˜brakesā€™ of a car (analogy)
  • 49. p53 Tumor Suppressor Protein Triggers Cell Suicide p53 protein Normal cell Excessive DNA damage Cell suicide (Apoptosis) One particular tumor suppressor gene codes for a protein called ā€œp53ā€ that can trigger cell suicide (apoptosis). In cells that have undergone DNA damage, the p53 protein acts like a brake pedal to halt cell growth and division. If the damage cannot be repaired, the p53 protein eventually initiates cell suicide, thereby preventing the genetically damaged cell from growing out of control.
  • 50. pRB - Tumor suppressor gene From R Bernards
  • 52. Retinoblastoma occurs when pRB is mutated (inactivated) or sometimes deleted Figure 7.4b The Biology of Cancer (Ā© Garland Science 2007)
  • 53. Inherit mutant allele Figure 7.7 The Biology of Cancer (Ā© Garland Science 2007)
  • 54. Deletion of a part of Chromosome 13 in a retinoblastoma patient Figure 7.10 The Biology of Cancer (Ā© Garland Science 2007)
  • 55. Oncogenes or tumor genes are genes with potential properties for the induction of neoplastic transformation either in natural or experimental conditions (Duesberg 1980) Tumor suppressor genes are normal genes whose ABSENCE can lead to cancer
  • 56. ā€œNever, never, never give upā€ Winston Churchill 1966 Nobel prize in Physiology and medicine