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Mollecular and
Cellular Biology
Lecture – 2
Nafis Neehal, Lecturer, Department of CSE, DIU
CONTENTS
1. Cell
- Eukaryotes VS Prokaryotes
- Mitosis VS Meiosis
2. Nucleic Acids
-DNA
* DNA Structure
* DNA Replication
-RNA
* RNA Structure
* Major RNA Types
3. Gene Structure
4. Central Dogma
5. Protein
6. Gene Regulation and Alternative Splicing
7. Miscellaneous Terms
1. Cell
Let’s learn about Eukaryotes, Prokaryotes and Cell Division
Eukaryotic Cells
• Single or Multi Cell
• Are called Eukaryotes
• Have Nucleus
• Have membrane bounded organelles
• Have chromosomes inside Nucleus
• Seen in most of the life forms
Prokaryotic Cells
â–ąSingle Cell organism
â–ąAre called Prokaryotes
â–ąNo Nucleus
â–ąNo other membrane bounded organelles
â–ąOne piece of rolled up DNA floating in cellular fluid
â–ąMostly some forms of very ancient Bacteria
Mitosis Cell Division
• Happens in Somatic Cells (general body
cells)
• Cell and chromosome, both gets divided
only once
• No cross over
• Takes part in healing and repair
Meiosis Cell Division
• Happens in Germ Cells
• Cell is divided twice, but chromosome only
once
• Cross over happens
• Takes part in formation of gametes and
maintenance of chromosome number in
the race
2. DeOxyRiboNucleic Acid (DNA)
Carrier of genetic instructions
DNA Structure
â–ąDouble Helix Structure (Watson and Crick, Nature
1953)
â–ąTwo complimentary antiparallel strands, one runs
from 5’ to 3’ end and another runs from 3’ to 5’ end
▹3 major parts – Nitrogenous Base, 5-Carbon
Deoxyribose Sugar and Phosphate Group
▹Four nitrogenous bases – Adenine (A), Cytosine (C),
Guanine (G), Thymine (T)
â–ąA-T is Double Hydrogen Bond and G-C is Triple
Hydrogen Bond
â–ąDNA is more stable than RNA due to its Deoxyribose
Sugar Structure
DNA Replication
â–ąInitiation
- Helicase enzyme unwinds DNA strands
- Replication fork is created
- RNA Primer is created by Primase enzyme
- Primer is starting point of elongation
â–ąElongation
- New DNA Strand grows 1 base at a time as
complimentary of leading strand (5’ to 3’)
- DNA Polymerase enzyme controls it
- Complimentary strand of lagging strand is
created in small fragments called Okazaki
Fragments (3’ to 5’)
â–ąTermination
- Exonuclease enzyme removes all the
primer sequences from new strands
- Again, DNA Polymerase fills the gaps
- DNA Ligase enzyme seals all the gaps
* DNA Replication is Semi-Conservative, because, in new sets of DNA, one strand is newly created but the
other strand comes from the ancestor.
3. RiboNucleic Acid (RNA)
Protein Coding and Carrier
RNA Structure
â–ąSingle Helix Structure
▹Single Strand which generally runs from 5’ to 3’
▹3 major parts – Nitrogenous Base, 5-Carbon Ribose
Sugar and Phosphate Group
▹Four nitrogenous bases – Adenine (A), Cytosine (C),
Guanine (G), Uracil (U)
â–ąA-U is Double Hydrogen Bond and G-C is Triple
Hydrogen Bond
â–ąRNA is less stable than DNA due to its Ribose
Sugar’s structure
RNA Types
Messenger RNA (mRNA)
Carries a genes coding message for
protein from Nucleus to Ribosome
Transfer RNA (tRNA)
Transfers specific amino acid
sequence to ribosome to form
Protein
Ribosomal RNA (rRNA)
Protein and rRNA combinedly forms
ribosome
Non-Coding RNA
Not translated into protein. Ex –
tRNA, rRNA
Catalytic RNA
Catalyze chemical reaction.
Double Stranded RNA
Contains complementary strands
like DNA. Induces gene exrpression.
4. Gene Structure
A basic structure of Eukaryotic Gene Gene
Eukaryotic Gene Structure
▹Two major parts – Exon & Intron
▹Exon – Takes part in protein coding and production
▹Intron – Does not take part in protein coding, part of pre-mRNA but
gets filtered out in matured mRNA
5. Central Dogma
Producing Protein from DNA
Major Steps of Central Dogma
â–ąTranscription
- RNA Polymerase enzyme attaches to the start of the
gene
- mRNA is created (complimentary to DNA strand RNA
Polymerase is attached)
- mRNA is processed, unnecessary sections are
removed (introns)
- mRNA moves out of nucleus into cytoplasm
â–ąTranslation
- mRNA binds to Ribosome
- Ribosome reads code in mRNA (triplets/codons)
- tRNA brings Amino Acid corresponding to codon
- Chain of Polypeptide / Amino Acid is formed
- Chain folds in different 3D shapes and produces
different types of Proteins
Genetic Codes in Translation (Codons)
▹Start Codon – AUG
â–ąStart Codon codes Methionine
▹Stop Codon – UAA, UAG, UGA
â–ą64 Combinations Possible
â–ą20 Amino Acids
â–ąMore than 1 combination can code single Amino
Acid (Ex – UUU, UUC both codes -Phe-)
6. Protein
3D Structure with different formation of Amino Acid chain
Protein Overview
â–ąChains of 20 types of Amino Acid
â–ąPerforms most of the cell functions
- Regulates gene expression
- Acts as enzymes which catalyze chemical reactions
- Forms structures
â–ąFolds into 3 dimensional structures
â–ąFunction of a protein is determined by its structure
7. Gene Regulation and Alternative
Splicing
Study different gene regulations and splicing method
Regulating Gene Expression
â–ąGene regulation refers to the mechanism of
inducing or repressing the expression of a gene
▹2 types of regulation – Positive & Negative
â–ąPositive Regulation works with Activator
* Operator + Activator = Transcription
* Operator – Activator = No Transcription
â–ąNegative Regulation works with Repressor
* Operator + Repressor = No Transcription
* Operator – Repressor = Transcription
Alternative Splicing
â–ąDNA has genes
▹Genes has regions – Exons & Introns
â–ąPre-mRNA has both introns and exons
â–ąMatured mRNA has only exons
â–ąDifferent combinations of exon regions
form different protein, this is alternative
splicing
â–ąAlternative Splicing is the process in which
one gene produces many different proteins
8. Miscellaneous Terms
Some comparisons, terms etc.
Phenotype VS Genotype
â–ąPhenotype is the physical expression of a gene
â–ąGenotype is the genetic structure
▹Example – Eye color is phenotype, and the gene
responsible for eye color is genotype.
Deoxyribose VS Ribose Sugar
â–ąDNA has deoxyribose sugar
â–ąRNA has ribose sugar
â–ąDNA is more stable than RNA due to
the sugar structure stability
Purine VS Pyrimidine
â–ąPurines have double ring
â–ąPyrimidines have single ring
Nucleotide VS Nucleoside
â–ąNucleoside = Base + Sugar
â–ąNucleotide = Base + Sugar + Phosphate
3-7 Years Average
Lifespan of a Human Hair
32 Million
Bacteria lives in every inch of your skin
1 Cm
Taller in the morning than in the evening
Human Tongue
Strongest muscle in the body
Motivated?
Youtube Links
â–ąDNA Structure - https://www.youtube.com/watch?v=C1CRrtkWwu0
â–ąDNA Replication - https://www.youtube.com/watch?v=TNKWgcFPHqw
â–ąCentral Dogma - https://www.youtube.com/watch?v=gG7uCskUOrA

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Molecular and Cellular Biology Lecture

  • 1. Mollecular and Cellular Biology Lecture – 2 Nafis Neehal, Lecturer, Department of CSE, DIU
  • 2. CONTENTS 1. Cell - Eukaryotes VS Prokaryotes - Mitosis VS Meiosis 2. Nucleic Acids -DNA * DNA Structure * DNA Replication -RNA * RNA Structure * Major RNA Types 3. Gene Structure 4. Central Dogma 5. Protein 6. Gene Regulation and Alternative Splicing 7. Miscellaneous Terms
  • 3. 1. Cell Let’s learn about Eukaryotes, Prokaryotes and Cell Division
  • 4. Eukaryotic Cells • Single or Multi Cell • Are called Eukaryotes • Have Nucleus • Have membrane bounded organelles • Have chromosomes inside Nucleus • Seen in most of the life forms
  • 5. Prokaryotic Cells â–ąSingle Cell organism â–ąAre called Prokaryotes â–ąNo Nucleus â–ąNo other membrane bounded organelles â–ąOne piece of rolled up DNA floating in cellular fluid â–ąMostly some forms of very ancient Bacteria
  • 6. Mitosis Cell Division • Happens in Somatic Cells (general body cells) • Cell and chromosome, both gets divided only once • No cross over • Takes part in healing and repair
  • 7. Meiosis Cell Division • Happens in Germ Cells • Cell is divided twice, but chromosome only once • Cross over happens • Takes part in formation of gametes and maintenance of chromosome number in the race
  • 8. 2. DeOxyRiboNucleic Acid (DNA) Carrier of genetic instructions
  • 9. DNA Structure â–ąDouble Helix Structure (Watson and Crick, Nature 1953) â–ąTwo complimentary antiparallel strands, one runs from 5’ to 3’ end and another runs from 3’ to 5’ end â–ą3 major parts – Nitrogenous Base, 5-Carbon Deoxyribose Sugar and Phosphate Group â–ąFour nitrogenous bases – Adenine (A), Cytosine (C), Guanine (G), Thymine (T) â–ąA-T is Double Hydrogen Bond and G-C is Triple Hydrogen Bond â–ąDNA is more stable than RNA due to its Deoxyribose Sugar Structure
  • 10. DNA Replication â–ąInitiation - Helicase enzyme unwinds DNA strands - Replication fork is created - RNA Primer is created by Primase enzyme - Primer is starting point of elongation â–ąElongation - New DNA Strand grows 1 base at a time as complimentary of leading strand (5’ to 3’) - DNA Polymerase enzyme controls it - Complimentary strand of lagging strand is created in small fragments called Okazaki Fragments (3’ to 5’) â–ąTermination - Exonuclease enzyme removes all the primer sequences from new strands - Again, DNA Polymerase fills the gaps - DNA Ligase enzyme seals all the gaps * DNA Replication is Semi-Conservative, because, in new sets of DNA, one strand is newly created but the other strand comes from the ancestor.
  • 11. 3. RiboNucleic Acid (RNA) Protein Coding and Carrier
  • 12. RNA Structure â–ąSingle Helix Structure â–ąSingle Strand which generally runs from 5’ to 3’ â–ą3 major parts – Nitrogenous Base, 5-Carbon Ribose Sugar and Phosphate Group â–ąFour nitrogenous bases – Adenine (A), Cytosine (C), Guanine (G), Uracil (U) â–ąA-U is Double Hydrogen Bond and G-C is Triple Hydrogen Bond â–ąRNA is less stable than DNA due to its Ribose Sugar’s structure
  • 13. RNA Types Messenger RNA (mRNA) Carries a genes coding message for protein from Nucleus to Ribosome Transfer RNA (tRNA) Transfers specific amino acid sequence to ribosome to form Protein Ribosomal RNA (rRNA) Protein and rRNA combinedly forms ribosome Non-Coding RNA Not translated into protein. Ex – tRNA, rRNA Catalytic RNA Catalyze chemical reaction. Double Stranded RNA Contains complementary strands like DNA. Induces gene exrpression.
  • 14. 4. Gene Structure A basic structure of Eukaryotic Gene Gene
  • 15. Eukaryotic Gene Structure â–ąTwo major parts – Exon & Intron â–ąExon – Takes part in protein coding and production â–ąIntron – Does not take part in protein coding, part of pre-mRNA but gets filtered out in matured mRNA
  • 16. 5. Central Dogma Producing Protein from DNA
  • 17. Major Steps of Central Dogma â–ąTranscription - RNA Polymerase enzyme attaches to the start of the gene - mRNA is created (complimentary to DNA strand RNA Polymerase is attached) - mRNA is processed, unnecessary sections are removed (introns) - mRNA moves out of nucleus into cytoplasm â–ąTranslation - mRNA binds to Ribosome - Ribosome reads code in mRNA (triplets/codons) - tRNA brings Amino Acid corresponding to codon - Chain of Polypeptide / Amino Acid is formed - Chain folds in different 3D shapes and produces different types of Proteins
  • 18. Genetic Codes in Translation (Codons) â–ąStart Codon – AUG â–ąStart Codon codes Methionine â–ąStop Codon – UAA, UAG, UGA â–ą64 Combinations Possible â–ą20 Amino Acids â–ąMore than 1 combination can code single Amino Acid (Ex – UUU, UUC both codes -Phe-)
  • 19. 6. Protein 3D Structure with different formation of Amino Acid chain
  • 20. Protein Overview â–ąChains of 20 types of Amino Acid â–ąPerforms most of the cell functions - Regulates gene expression - Acts as enzymes which catalyze chemical reactions - Forms structures â–ąFolds into 3 dimensional structures â–ąFunction of a protein is determined by its structure
  • 21. 7. Gene Regulation and Alternative Splicing Study different gene regulations and splicing method
  • 22. Regulating Gene Expression â–ąGene regulation refers to the mechanism of inducing or repressing the expression of a gene â–ą2 types of regulation – Positive & Negative â–ąPositive Regulation works with Activator * Operator + Activator = Transcription * Operator – Activator = No Transcription â–ąNegative Regulation works with Repressor * Operator + Repressor = No Transcription * Operator – Repressor = Transcription
  • 23. Alternative Splicing â–ąDNA has genes â–ąGenes has regions – Exons & Introns â–ąPre-mRNA has both introns and exons â–ąMatured mRNA has only exons â–ąDifferent combinations of exon regions form different protein, this is alternative splicing â–ąAlternative Splicing is the process in which one gene produces many different proteins
  • 24. 8. Miscellaneous Terms Some comparisons, terms etc.
  • 25. Phenotype VS Genotype â–ąPhenotype is the physical expression of a gene â–ąGenotype is the genetic structure â–ąExample – Eye color is phenotype, and the gene responsible for eye color is genotype.
  • 26. Deoxyribose VS Ribose Sugar â–ąDNA has deoxyribose sugar â–ąRNA has ribose sugar â–ąDNA is more stable than RNA due to the sugar structure stability
  • 27. Purine VS Pyrimidine â–ąPurines have double ring â–ąPyrimidines have single ring
  • 28. Nucleotide VS Nucleoside â–ąNucleoside = Base + Sugar â–ąNucleotide = Base + Sugar + Phosphate
  • 29. 3-7 Years Average Lifespan of a Human Hair 32 Million Bacteria lives in every inch of your skin 1 Cm Taller in the morning than in the evening Human Tongue Strongest muscle in the body
  • 31. Youtube Links â–ąDNA Structure - https://www.youtube.com/watch?v=C1CRrtkWwu0 â–ąDNA Replication - https://www.youtube.com/watch?v=TNKWgcFPHqw â–ąCentral Dogma - https://www.youtube.com/watch?v=gG7uCskUOrA