OSFair2017 Workshop | Open Science Publishing
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Alessia Bardi and Paolo Manghi talk about open science publishing | OSFair2017 Workshop Workshop title: Open Science as a service: tools for research communities Workshop overview: The aim of this workshop is to work with research communities especially interested/relevant to open science publishing paradigms: publishing of literature, datasets, methods, and experiments for reproducibility and transparent assessment of science. This will be an interactive session with communities presenting their requirements and current tooling to identify overlaps, better and cost-effective solutions. When: DAY 2 - PARALLEL SESSION 3
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OSFair2017 Workshop | Open Science Publishing
- 1. @openaire_eu Open Science Publishing OpenScienceas-a-ServiceWorkshop OpenScienceFAIR 6th ofSeptember2017,Athens AlessiaBardiandPaoloManghi InstituteofInformationScienceandTechnologies-CNR This is where you type in the event
- 2. WORKSHOPSCHEDULE Welcome&Intro “OpenSciencePublishingChallenges”,PaoloManghi,ISTI-CNR(IT) Community perspectives “AStructuralBiologyviewofOpenScience”,ChrisMorris,STFC(UK) “AnEcologyandEvolutionviewofOpenScience”,AnticaCulina,KNAW(NL) “TheELIXIRviewofOpenScience”,ThanasisVergoulis,AthenaResearchandInnovationCentre(GR) OpenAIRE-Connect ServicesforOpenScience as-a-Service “ResearchCommunityDashboard”,PaoloManghi,ISTI-CNR(IT) “Catch-AllBrokerService”,AlessiaBardi,ISTI-CNR(IT) 2
- 3. OpenSciencepublishing Supportingreproducibilityandtransparentevaluation Research data Research methods e-infra Tools & Services Research data Scientific process Research literature: Articles, docs, white papers Publishing01101010 01100001 11010010 01101010 01100001 11010010 Research Communication Infrastructure Repeat/Reproduce/Reuse and Evaluation What does Open Science Publishing mean?
- 4. OpenSciencepublishing Supportingreproducibilityandtransparentevaluation Research data Research methods e-infra Tools & Services Research data Scientific process Research literature: Articles, docs, white papers Publishing 01101010 01100001 11010010 01101010 01100001 11010010 Publication Repository 01101010 01100001 11010010 Data Repository Software Repository 01101010 01100001 11010010 01101010 01100001 11010010 Package RepositoryEnabling Reproducibility citation citation Enabling Transparent evaluation Other products: methods, workflows, protocols
- 5. OpenSciencepublishing:enablingfactors Publishing of all kinds of research artefacts Publishing packages of artefacts Publishing an up-to-date record of research artefacts metadata and links Enabling transparent evaluation Enabling reproducibility
- 6. OpenSciencePublishing:barriers Repositories lack support to Open Science publishing No support for integration of repositories for software, methods, or packages Minimal or no support for links between artefacts in different repositories No support for keeping repositories with up-to-date links between artefacts Research communities lack culture of Open Science publishing Lack of e-infrastructure and tools for Open Science: e.g. repository limits above, exchange formats, workflows Difficulties to self-organize and sustain research communication solutions: e.g. identify the problems, see the benefits, devise solutions, applying economy of scale
- 7. @openaire_eu OpenScienceas-a-Service intheOpenAIREinfrastructure PaoloManghi InstituteofInformationScienceandTechnologies-CNR This is where you type in the event
- 8. TheOpenAIREInfrastructure European (and beyond) infrastructure for Open Access and Open Science Networking infrastructure: Open Access/Science advocacy and support, global alignment and interoperability, etc. Technical infrastructure: services for monitoring of Open Access/Science and Research Impact for funders and communities
- 9. OpenAIREtosupportOpenScience Facilitate Research Communities adoption of Open Science publishing principles by supporting publishing tools as-a-Service Facilitate repositories at moving towards Open Science publishing by supporting notification- based research communication as-a-Service
- 10. OpenAIREtechnicalinfrastructure 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 fund fund Harvest Harmonize De-duplicate Inference 01101010 01100001 11010010 Deposit articles/datasets (DOI) Claim links Stats: • research impact • Open Access trends Repositories of publications, datasets, projects Entities: • 21M+ publications (de-duplicated) • 450,000+ links inferred (and collected) from publications and projects • 500,000+ datasets (linked to publications or projects) Collected from: • 2700+ repositories and journals
- 11. OpenScienceas-a-Service(OSaaS) Catch-All-Notification Broker Software Packages Articles DataProjects Research Community Dashboard Harvesting Search-Browse-Monitor- Research Impact Subscription & Notification Articles Data Researchers Content Providers Articles Data Projects Methods Software
- 13. OpenAIREOSaaS:methodsandpackages 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 fund fund Harvest Harmonize De-duplicate Inference 01101010 01100001 11010010 Repositories of publications, datasets, projects, methods, packages • Metadata description for methods and packages: citation and reproducibility (e.g. Research Objects, Rmap) • Interoperability guidelines for exchanging packages of interlinked artefacts: enabling exchange of information across research communication infrastructure
- 14. DashboardforResearchCommunities 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 fund Harvest Harmonize De-duplicate Inference Repositories of publications, datasets, projects, methods, packages Research Community Service Research Community Operator 01101010 01100001 11010010 fund Request Dashboard for Community
- 15. DashboardforResearchCommunities 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 fund Harvest Harmonize Deduplicate Inference Repositories of publications, datasets, projects, methods, packages Research Community Service Research Community Operator Researchers 01101010 01100001 11010010 • Deposit (DOI) • Claim • Manage users • Configure stats • Configure inference fund
- 16. DashboardforResearchCommunities 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 fund Harvest Harmonize Deduplicate Inference Repositories of publications, datasets, projects, methods, packages Research Community Service Research Community Operator Researchers 01101010 01100001 11010010 • Deposit (DOI) • Claim • Stats: research impact & OA • Manage users • Configure stats • Configure inference fund
- 17. DashboardforResearchCommunities 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 fund Harvest Harmonize Deduplicate Inference Repositories of publications, datasets, projects, methods, packages Research Community Service Research Community Operator Researchers 01101010 01100001 11010010 • Deposit (DOI) • Claim • Stats: research impact & OA • Manage users • Configure stats • Configure inference fund
- 18. ResearchCommunitiesandOpenSciencebenefits • Can continue their publishing practices, but, if needed they have support for deposition of any artefact Common repository for publishing (deposition) of datasets, methods, and packages • Community information space to share, discovery, and reuse (reproduce) scientific results Collaborative curation of a community-specific research communication domain • Scientific reward strategies can be developed Research impact and statistics
- 20. SubscriptionandNotificationforRepositories 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 fund Harvest Harmonize De-duplicate Inference Repositories of publications, datasets, projects, methods, packages Catch-All Notification Broker Service 01101010 01100001 11010010 fund Repository Manager Request Notification Workspace
- 21. SubscriptionandNotificationforRepositories 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 fund Harvest Harmonize De-duplicate Inference Repositories of publications, datasets, projects, methods, packages Catch-All Notification Broker Service 01101010 01100001 11010010 fund Repository Manager • Subscription: enrichment or additions to repository • Notification management
- 22. SubscriptionandNotificationforRepositories 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 fund Harvest Harmonize De-duplicate Inference Repositories of publications, datasets, projects, methods, packages Catch-All Notification Broker Service 01101010 01100001 11010010 fund Repository Manager• Subscription: enrichment or additions to repository • Notification management ?
- 23. SubscriptionandNotificationforRepositories 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 01101010 01100001 11010010 fund Harvest Harmonize Deduplicate Inference Repositories of publications, datasets, projects, methods, packages Catch-All Notification Broker Service 01101010 01100001 11010010 fund Repository Manager • Subscription: enrichment or additions to repository • Notification management Notifications • Mail • APIs • UIs ?
- 24. EnablingaNetworkofResearchCommunicationBrokers Producers of events Subscriptions Subscriptions Subscriptions Consumers of events subscribe notify subscribe notify subscribe notify Exchanging Subscriptions & channeling notifications Exchanging Subscriptions & channeling notifications
- 25. Repositories:OpenSciencebenefits • Enabling addition of links to artefacts of any kind Extending repository metadata models to Open Science • “Almost real-time” exchange of information: notifications about links to other artefacts, missing properties, and missing artefacts Keeping their collection up-to-date: enrichments and additions • Enabling repositories to be notified of content of interest, enabling construction of research-focused aggregators by notifications Fostering notification-based and federated dissemination of knowledge
- 26. OpenAIREtowardsOpenScience Research Community Dashboard Catch-All Notification Broker Served on-demand according to the OSaaS approach Customizable by different disciplines and providers, each with different practices and maturity levels Framework aligning communities and repositories on practices addressing transparent evaluation and reproducibility
- 27. Thank you! Alessia Bardi and Paolo Manghi name.surname@isti.cnr.it
Editor's Notes
- Highlight difference between citation and other kinds of relationships
- Highlight difference between citation and other kinds of relationships
- Enriched, de-duplicated graph Subjects PIDs (e.g. DOI) Links to dataset, projects, publications, software, other research Repo managers very interested, they can improve metadata in repo with: Missing information Missing metadata Request for notification workspace: no changes needed on the repo side
- Workspace to configure what is of interest (which kinds of events) and how to be notified. Example: pubs from repo (green)
- Enrichment events: link to dataset, to project Addition event: pub in repo links to dataset, another pub (not from repo) links to the dataset: is this second pub interesting to the repo? Should its metadata be ingested into the repo?
- Apply the approach outside the OpenAIRE context: aggregators communicating events with each other
- Open Science enabling factors: Publishing of all kinds of research artefacts [Publishing packages of artefacts] Publishing an up-to-date record of research artefacts metadata and links