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PHASE CONTRAST
MICROSCOPY &
FLUORESCENT
MICROSCOPY
Vivek kumar
MSC MICROBIOLOGY
1ST YEAR
Bangalore university
INTRODUCTION TO PHASE CONTRAST
MICROSCOPY
 Phase contrast microscopy, first described in 1934
by Dutch physicist Frits Zernike
 Contrast-enhancing optical technique that can be
utilized to produce high-contrast images of
transparent specimens
 such as living cells (usually in culture),
microorganisms, thin tissue slices, fibers, glass
fragments, and subcellular particles (including
nuclei and other organelles).
.
 The phase contrast microscopy is a special
adaptation of the light microscopy & helps to obtain
a clear picture of living or unstained cells.
 The adaptors convert minute difference in phase
changes in transmitted light due to refractive
indices of all cell organelles in to perceptible
shades of grey
 This allow organelles of the living cell to become
visible with fair contrast in them.
ANNULAR RING AND PHASERING
 ANNULAR RING : is between condenserand light
source
 PHASE RING : is between objective lens and
image plane
 SPL PROPERTY : both the rings allow partial light
to pass through it and the rest is blocked
WORKING PRINCIPLE
 Regions of different composition likely to have
different Refractive indices. Normally such
differences cannot be detected by our eyes.
However, PCM converts differences in μ into
differences in intensity (relative brightness and
darkness) Which are visible to eye. •
 Interference of light: interaction of two light waves
which leads to the formation of resultant wave
constructive interference
destructive interference
.
 Light passes through the condenser via annular
ring.
 After reaching the specimen plate two types of beams
are formed
 IF THERE IS NO SPECIMEN IN LENS
1 Surrounding wave (S)
2 Particle wave (P)
P=S
NO INTERFERENCE
Light source
Annular ring
Condenser
Specimen plate
(interference)
Objective lens
Phase ring
Imge plane
.
 IF LENS CONTAIN SAMPLE :
 Light beams gets diffracted because of different
density at different regions of sample
1 Surrounding wave (S)
2 Diffaractive wave (D)
P=S+D
Either constructive interference or destructive
interference may occur
.
 The ring shaped illuminating light that passes the
condenser annulus is focused on the specimen by
the condenser • Some of the illuminating light is
scattered by the specimen .The remaining light is
unaffected by the specimen and forms the
background light. In a phase contrast microscope
 The image contrast is improved by two different
methods
 • Negative Phase contrast
 • Positive Phase contrast
.
 Negative Phase contrast produces destructive interference
• Thus , the image obtained is
• Inner region of the sample - bright
• Outer region of the sample - darker
• Surrounding lens - opaque
 Positive phase contrast produces constructive interference
Thus, the image of the specimen obtained is
* Inner region of the sample –darker
* Outer region of the sample – bright
* Surrounding lens - opaque
ADVANTAGES
 Small unstained specimens such as a living cell can
be seen.
 It makes Highly Transparent objects more visible.
 Examining Intracellular components of living cells at
relatively high resolution.
 eg: The dynamic motility of Mitochondria, mitotic
chromosomes & vacuoles.
 It made it possible for Biologists to study living cells
and how they proliferate through cell division.
FLUORESCENCE MICROSCOPY
.
DISCOVERY
 British scientist Sir George G.Stokes first described
fluorescence in 1852
 He observed that the mineral fluorspar emitted red
light when it was illuminated by ultraviolet excitation
 Stokes noted that fluorescence emission always
occurred at a longer wavelength than of the
excitation light
 This shift towards longer wavelength is known as
Stokes Shift
INTRODUCTION TO FLUORESCENCE MICROSCOPY
 Fluorescence microscopy is an one of the light
microscope
 It refers to any microscope that users fluorescence
to generate an image
 It produces 3d image
 The technique is used to study specimen , which
can be made to fluorescence
HOW DOES FLUORESCENCE OCCURS
 Florescence is a phenomenon that takes place
when a substances absorbs light at a given
wavelength and emits light at another wavelength.
 Florescence occurs as an electron, which has been
excited to a higher, and more unstable energy state
, relaxes to its ground state and gives off a photon
of light
WORKING PRINCIPLE
 The sample to be analyzed is placed on a lens and
the sample is coated with a fluorescence materials
 The light is illuminated through the lens with the
higher energy source. The illumination light is
absorbed by the fluorophores
 The sample causes them to emit a longer lower
energy wavelength light
 This fluorescence light can be separated from the
surroundings radiation with filters
DICHROIC FILTER
 A dichroic filter or thin film filter , is a very accurate
color filter used to selective pass light of a small
range of colors while reflecting other colors
.
 The light from the light source is passed through
the excitation
 The specific wavelength of light is passed through
the sample via dichromatic filter
 The objective lens focuses the light to the specimen
 The light emitted from the specimen is filtered by
barrier filter
APPLICATIONS
 Imaging structural components of small specimens
, such as cells
 Conducting viability studies on cell populations (are
they alive or dead)
 Imaging the genetic material within a cell (DNA and
RNA)
 To differentiate different types of cells
Thank you

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Phase contrast & Flurosence microscope

  • 1. PHASE CONTRAST MICROSCOPY & FLUORESCENT MICROSCOPY Vivek kumar MSC MICROBIOLOGY 1ST YEAR Bangalore university
  • 2. INTRODUCTION TO PHASE CONTRAST MICROSCOPY  Phase contrast microscopy, first described in 1934 by Dutch physicist Frits Zernike  Contrast-enhancing optical technique that can be utilized to produce high-contrast images of transparent specimens  such as living cells (usually in culture), microorganisms, thin tissue slices, fibers, glass fragments, and subcellular particles (including nuclei and other organelles).
  • 3.
  • 4. .  The phase contrast microscopy is a special adaptation of the light microscopy & helps to obtain a clear picture of living or unstained cells.  The adaptors convert minute difference in phase changes in transmitted light due to refractive indices of all cell organelles in to perceptible shades of grey  This allow organelles of the living cell to become visible with fair contrast in them.
  • 5. ANNULAR RING AND PHASERING  ANNULAR RING : is between condenserand light source  PHASE RING : is between objective lens and image plane  SPL PROPERTY : both the rings allow partial light to pass through it and the rest is blocked
  • 6. WORKING PRINCIPLE  Regions of different composition likely to have different Refractive indices. Normally such differences cannot be detected by our eyes. However, PCM converts differences in μ into differences in intensity (relative brightness and darkness) Which are visible to eye. •  Interference of light: interaction of two light waves which leads to the formation of resultant wave constructive interference destructive interference
  • 7. .  Light passes through the condenser via annular ring.  After reaching the specimen plate two types of beams are formed  IF THERE IS NO SPECIMEN IN LENS 1 Surrounding wave (S) 2 Particle wave (P) P=S NO INTERFERENCE
  • 8. Light source Annular ring Condenser Specimen plate (interference) Objective lens Phase ring Imge plane
  • 9. .  IF LENS CONTAIN SAMPLE :  Light beams gets diffracted because of different density at different regions of sample 1 Surrounding wave (S) 2 Diffaractive wave (D) P=S+D Either constructive interference or destructive interference may occur
  • 10.
  • 11. .  The ring shaped illuminating light that passes the condenser annulus is focused on the specimen by the condenser • Some of the illuminating light is scattered by the specimen .The remaining light is unaffected by the specimen and forms the background light. In a phase contrast microscope  The image contrast is improved by two different methods  • Negative Phase contrast  • Positive Phase contrast
  • 12. .  Negative Phase contrast produces destructive interference • Thus , the image obtained is • Inner region of the sample - bright • Outer region of the sample - darker • Surrounding lens - opaque  Positive phase contrast produces constructive interference Thus, the image of the specimen obtained is * Inner region of the sample –darker * Outer region of the sample – bright * Surrounding lens - opaque
  • 13. ADVANTAGES  Small unstained specimens such as a living cell can be seen.  It makes Highly Transparent objects more visible.  Examining Intracellular components of living cells at relatively high resolution.  eg: The dynamic motility of Mitochondria, mitotic chromosomes & vacuoles.  It made it possible for Biologists to study living cells and how they proliferate through cell division.
  • 15. DISCOVERY  British scientist Sir George G.Stokes first described fluorescence in 1852  He observed that the mineral fluorspar emitted red light when it was illuminated by ultraviolet excitation  Stokes noted that fluorescence emission always occurred at a longer wavelength than of the excitation light  This shift towards longer wavelength is known as Stokes Shift
  • 16. INTRODUCTION TO FLUORESCENCE MICROSCOPY  Fluorescence microscopy is an one of the light microscope  It refers to any microscope that users fluorescence to generate an image  It produces 3d image  The technique is used to study specimen , which can be made to fluorescence
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  • 18. HOW DOES FLUORESCENCE OCCURS  Florescence is a phenomenon that takes place when a substances absorbs light at a given wavelength and emits light at another wavelength.  Florescence occurs as an electron, which has been excited to a higher, and more unstable energy state , relaxes to its ground state and gives off a photon of light
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  • 20. WORKING PRINCIPLE  The sample to be analyzed is placed on a lens and the sample is coated with a fluorescence materials  The light is illuminated through the lens with the higher energy source. The illumination light is absorbed by the fluorophores  The sample causes them to emit a longer lower energy wavelength light  This fluorescence light can be separated from the surroundings radiation with filters
  • 21. DICHROIC FILTER  A dichroic filter or thin film filter , is a very accurate color filter used to selective pass light of a small range of colors while reflecting other colors
  • 22. .  The light from the light source is passed through the excitation  The specific wavelength of light is passed through the sample via dichromatic filter  The objective lens focuses the light to the specimen  The light emitted from the specimen is filtered by barrier filter
  • 23. APPLICATIONS  Imaging structural components of small specimens , such as cells  Conducting viability studies on cell populations (are they alive or dead)  Imaging the genetic material within a cell (DNA and RNA)  To differentiate different types of cells