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Xenobiotic Metabolism
Basic definitions:
1. Xenobiotic
• Chemicals foreign to the body. Can be
manufactured or natural.
– Drugs
– Industrial chemicals
– Pesticides
– Pollutants
– Pyrolysis products in grilled foods
– Secondary plant metabolites
– Toxins produced by molds, plants, animals
Elimination of Xenobiotics
• Depends on their lipophilicity
– Lipophilic compounds can be reabsorbed more
easily, therefore they circulate longer.
• Depends on their conversion to water
soluble compounds – biotransformation.
Biotransformation
• Definition: Conversion of a xenobiotic to a
more water soluble compound.
• Biotransformation = metabolism
• Biotransformation is catalyzed by enzymes
in the liver and other tissues.
Tissue sources of metabolizing
enzymes:
• The liver is the richest source.
• Tissues associated with the major routes of
exposure: skin, lung, nasal mucosa, eye,
gastrointestinal tract.
• Others: Kidney, adrenal, pancreas, spleen, heart,
brain, testis, ovary, placenta, plasma, erythrocytes,
platelets, lymphocytes, aorta.
Biotransformation is accomplished by a
small number of enzymes with broad
substrate specificities.
• Some xenobiotic metabolizing enzymes
also metabolize endogenous compounds.
Ex: bile salts, bilirubin.
• Metabolizing enzymes are either:
– 1. Constitutive
– 2. Inducible – enzyme synthesis is induced by
some external stimulus.
Biotransformation
More water soluble,
Less toxic
More water soluble,
More toxic compound
More effective drug
Less effective drug,
Less toxic
Age of Enlightenment:
• All substances are poisons; there is none
which is not a poison. The right dose
differentiates a poison from a remedy.
Paracelsus
Biotransformation Reactions:
• Phase I: Oxidation, reduction, hydrolysis
• Phase II: conjugation
Biotransformation Reactions:
• Phase I: Oxidation, reduction, hydrolysis
– Reactions that expose or introduce a functional
group.
• Phase II: conjugation
– Covalent linkage between the xenobiotic or one
of its metabolites with a water-soluble,
endogenous compound, e.g., glutathione.
Biotransformation Reactions:
• Phase I: Oxidation, reduction, hydrolysis
– Imparts small increases in hydrophilicity.
• Phase II: conjugation
– Imparts large increases in hydrophilicity.
Phase I Hydrolytic Enzymes:
• Carboxylesterases
– Hydrolyze esters, amides, and thioesters
• Organophosphatases
– Hydrolyze phosphoric acid esters
• Important to insecticide/pesticide metabolism
Organophosphatases
Ex) Paraoxonase
O
P
O
O
O C2H5
C2H5
NO2
NO2
OH
OH
P
O
O
O C2H5
C2H5
+
H2O
Paraoxon
Reduction:
• Reduction of alkenes, nitro or azo
compounds can occur in the intestine by:
– 1. Intestinal microflora
– 2. Cytochrome P450
• Requires low oxygen tension.
Ex) Nitrobenzene
NO2 NH2
aniline
Azo reduction:
N N
NH2
H2N SO2NH2 NH2
NH2
H2N
H2N SO2NH2
Prontosil
Sulfanilamide
+
Oxidations
• Cytochrome P450
• Alcohol dehydrogenase
• Peroxidases
Alcohol Dehydrogenase (ADH)
• Oxidation of alcohols to aldehydes
• Found in:
– Liver
– Kidney
– Lung
– Gastric mucosa
Metabolism of Ethanol
R CH2OH R C
O
H
R C
O
OH
NAD
+
NADH NADH
NAD
+
ADH ALDH
Microsomes
Cytosol Mitochondria
CH3 CH2OH CH3 C
O
H
CH3 C
O
OH
NAD
+
NADH NADH
NAD
+
ADH ALDH
CH3 CHOH
OH
CYP2E1
NADPH
NADP
+
Peroxidases
• Cooxidation reactions: Reactions which
couple the reduction of hydrogen peroxide
or arachidonic acid with the oxidation of a
xenobiotic.
• Do not require NADPH or NADH
• Include many different enzymes in a variety
of tissues.
Examples of peroxidase
enzymes:
• Prostaglandin H synthase (cyclooxygenase):
– Kidney, platelets, vasculature, GI tract, brain,
lung, bladder
• Myeloperoxidase
– leukocytes
• Lactoperoxidase
– Mammary tissue
N
H C
CH3
OH
O
.N
C
CH3
OH
O
N
C
CH3
O
O
NAPQI
free radical
NAPQI
Metabolism of Acetaminophen by
PHS (Cyclooxygenase)
N
H C
CH3
OH
O
.N
C
CH3
OH
O
N
C
CH3
O
O
NAPQI
free radical
NAPQI
Metabolism of Acetaminophen by
PHS (Cyclooxygenase)
Binding to protein Binding to protein
Metabolism of benzene to toxic
intermediates
OH
P450 P450
OH
OH
OH
OH
myeloperoxidase
O.
OH
Protein and
DNA binding -
bone marrow
suppression
Liver
Bone marrow
Cytochrome P450-mediated
oxidations
• Most important phase I enzyme.
• High concentrations found in the liver in the
endoplasmic reticulum (microsomes).
• Appreciable levels found in just about every tissue
in the body.
• Important role in the duration of action of drugs.
• Plays a pivotal role in both the detoxication of
xenobiotics and their activation to toxic or
tumorigenic intermediates.
Cytochrome P450-mediated
oxidations (continued)
• Can metabolize a large number of xenobiotics.
• Various isoforms are present in a variety of
tissues, each with diverse substrate specificities.
• Heme protein that can bind oxygen.
• Requires NADPH for catalytic activity.
• Can also metabolize endogenous compounds, for
example, steroid hormones, bile acids, vitamins,
fatty acids.
• Some isoforms also present in the mitochondria.
• Hydroxylation of aliphatic or aromatic carbon.
• Epoxidation of a double bond.
• Heteroatom (S-, N-) oxygenation and N-
hydroxylation.
• Heteroatom dealkylation (Ex. ROR ROH or
SR SH)
• Ester cleavage
• Dehydrogenation
Cytochrome P450 catalyzes
many types of reactions:
Cytochrome P450-mediated
epoxidation
O O O O
O
H
H
Coumarin
Coumarin-3,4-epoxide
Cytochrome P450 – mediated
hydroxylation
COOH COOH
OH
CYP3A4
Lauric acid Hydroxylauric acid
Cytochrome P450 – mediated
dehydrogenation
N
C
CH3
OH
H
O
N
C
CH3
O
O
Acetaminophen NAPQI
CYP2E1
CYP1A2
CYP3A4
Chemical Interactions
• Toxicity is influenced by chemical
interactions.
Chemical Interactions
(Drug-drug interactions)
• Potentiation => one chemical causes a another
chemical to have greater effect than if given
alone
– Example: hepatotoxicity of acetaminophen is
enhanced by ethanol
+
®
Chemical Interactions
(Drug-drug interactions)
• Potentiation => one chemical causes a another
chemical to have greater effect than if given
alone
– Example: hepatotoxicity of acetaminophen is
enhanced by ethanol
+
®
Induces CYP2E1
Drugs which Modulate P450
Inducers Drug whose metabolism is enhanced
Phenobarbital and other barbiturates Chloramphenicol, digitoxin,
doxorubicin, estradiol, phenytoin,
cortisol
Omeprazole (Prilosec) or cigarette
smoke
Tricyclic antidepressants, propranolol
warfarin, theophylline
Rifampin Digitoxin, glucocorticoids, oral
contraceptives, propanolol
Ethanol acetaminophen
Inhibitors Drug whose metabolism is inhibited
Cimetidine (Tagamet) Diazepam, warfarin
Ketoconazole (antifungals) Cyclosporine, terfenadine
Grapefruit juice Tricyclic antidepressants, propranolol
warfarin, theophylline
Phase II
A. Glucuronidation : UDP - glucuronic acid is the
glucuronyl donor, and a variety of
glucuronosyltransferases, present in both the
endoplasmic reticulum and cytosol, are the
catalysts. Molecules such as 2-acetylamino
fluorene ( a carcinogen), aniline, benzoic acid,
memprobamate (a tranquilizer), phenol, and many
steroids are excreted as glucuronides. The
glucuronide may be attached to oxygen, nitrogen ,
or sulfur groups of the substrates. Glucuronidation
is probably the most frequent conjugation reaction
B. Sulfation : Some alcohols, arylamines, and
phenols are sulfated. The sulfate donor in
these and other biologic sulfation reactions
(eg : glycosaminoglycans, glycolipids) is
adenosine 3’ - phosphate - 5’ -
phosphosulfate (PAPS)
C : Conjugation with glutathione : A number of
potentially toxic electrophilic xenobiotics (such as
certain carcinogens) are conjugated to the nucleophilic
GSH in reactions that can be represented as follows
R + GSH R ---- S ----- G
Where R = an electrophilic xenobiotic. The enzymes
catalyzing these reactions are called glutathione S-
transferases and are present in high amounts in liver
cytosol and in lower amounts in other tissues. A variety
of glutathione S-transferases are present in human
tissue. If the potentially toxic xenobiotics were not
conjugated ato GSH, they would be free to combine
covalently with DNA, RNA, or cell protein and could
thus lead to serious cell damage.
D - Other reactions :
• Acetylation - Acetylation is represented by
X + Acetyl-CoA Acetyl-X + CoA
Where X represents a xenobiotic. As for other acetylation
reactions, acetyl-CoA (active acetate) is the acetyl
donor. These reactions are catalyzed by
acetyltransferases present in the cytosol of various
tissues, particularly liver. The drug isoniazid, used in
the treatment of tuberculosis, is subject to acetylation.
Polymorphic types of acetyltransferases exist, resulting
in individuals who are classified as slow or fast
acetylators,and influence the rate of clearance of drugs
such as isoniazid from blood. Slow acetylators are
more subject to certain toxic effects of isoniazid
because the drug persists longer in these individuals.
• Methylation : A few xenobiotics are subject
to methylation by methyltransferases,
employing S-adenosylmethionine as the
methyl donor.
xenobiotic metabolism, detoxification of  drugs, enzyme action

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xenobiotic metabolism, detoxification of drugs, enzyme action

  • 2. Basic definitions: 1. Xenobiotic • Chemicals foreign to the body. Can be manufactured or natural. – Drugs – Industrial chemicals – Pesticides – Pollutants – Pyrolysis products in grilled foods – Secondary plant metabolites – Toxins produced by molds, plants, animals
  • 3. Elimination of Xenobiotics • Depends on their lipophilicity – Lipophilic compounds can be reabsorbed more easily, therefore they circulate longer. • Depends on their conversion to water soluble compounds – biotransformation.
  • 4. Biotransformation • Definition: Conversion of a xenobiotic to a more water soluble compound. • Biotransformation = metabolism • Biotransformation is catalyzed by enzymes in the liver and other tissues.
  • 5. Tissue sources of metabolizing enzymes: • The liver is the richest source. • Tissues associated with the major routes of exposure: skin, lung, nasal mucosa, eye, gastrointestinal tract. • Others: Kidney, adrenal, pancreas, spleen, heart, brain, testis, ovary, placenta, plasma, erythrocytes, platelets, lymphocytes, aorta.
  • 6. Biotransformation is accomplished by a small number of enzymes with broad substrate specificities. • Some xenobiotic metabolizing enzymes also metabolize endogenous compounds. Ex: bile salts, bilirubin. • Metabolizing enzymes are either: – 1. Constitutive – 2. Inducible – enzyme synthesis is induced by some external stimulus.
  • 7. Biotransformation More water soluble, Less toxic More water soluble, More toxic compound More effective drug Less effective drug, Less toxic
  • 8. Age of Enlightenment: • All substances are poisons; there is none which is not a poison. The right dose differentiates a poison from a remedy. Paracelsus
  • 9. Biotransformation Reactions: • Phase I: Oxidation, reduction, hydrolysis • Phase II: conjugation
  • 10. Biotransformation Reactions: • Phase I: Oxidation, reduction, hydrolysis – Reactions that expose or introduce a functional group. • Phase II: conjugation – Covalent linkage between the xenobiotic or one of its metabolites with a water-soluble, endogenous compound, e.g., glutathione.
  • 11. Biotransformation Reactions: • Phase I: Oxidation, reduction, hydrolysis – Imparts small increases in hydrophilicity. • Phase II: conjugation – Imparts large increases in hydrophilicity.
  • 12. Phase I Hydrolytic Enzymes: • Carboxylesterases – Hydrolyze esters, amides, and thioesters • Organophosphatases – Hydrolyze phosphoric acid esters • Important to insecticide/pesticide metabolism
  • 14. Reduction: • Reduction of alkenes, nitro or azo compounds can occur in the intestine by: – 1. Intestinal microflora – 2. Cytochrome P450 • Requires low oxygen tension.
  • 16. Azo reduction: N N NH2 H2N SO2NH2 NH2 NH2 H2N H2N SO2NH2 Prontosil Sulfanilamide +
  • 17. Oxidations • Cytochrome P450 • Alcohol dehydrogenase • Peroxidases
  • 18. Alcohol Dehydrogenase (ADH) • Oxidation of alcohols to aldehydes • Found in: – Liver – Kidney – Lung – Gastric mucosa
  • 19. Metabolism of Ethanol R CH2OH R C O H R C O OH NAD + NADH NADH NAD + ADH ALDH
  • 20. Microsomes Cytosol Mitochondria CH3 CH2OH CH3 C O H CH3 C O OH NAD + NADH NADH NAD + ADH ALDH CH3 CHOH OH CYP2E1 NADPH NADP +
  • 21. Peroxidases • Cooxidation reactions: Reactions which couple the reduction of hydrogen peroxide or arachidonic acid with the oxidation of a xenobiotic. • Do not require NADPH or NADH • Include many different enzymes in a variety of tissues.
  • 22. Examples of peroxidase enzymes: • Prostaglandin H synthase (cyclooxygenase): – Kidney, platelets, vasculature, GI tract, brain, lung, bladder • Myeloperoxidase – leukocytes • Lactoperoxidase – Mammary tissue
  • 24. N H C CH3 OH O .N C CH3 OH O N C CH3 O O NAPQI free radical NAPQI Metabolism of Acetaminophen by PHS (Cyclooxygenase) Binding to protein Binding to protein
  • 25. Metabolism of benzene to toxic intermediates OH P450 P450 OH OH OH OH myeloperoxidase O. OH Protein and DNA binding - bone marrow suppression Liver Bone marrow
  • 26. Cytochrome P450-mediated oxidations • Most important phase I enzyme. • High concentrations found in the liver in the endoplasmic reticulum (microsomes). • Appreciable levels found in just about every tissue in the body. • Important role in the duration of action of drugs. • Plays a pivotal role in both the detoxication of xenobiotics and their activation to toxic or tumorigenic intermediates.
  • 27. Cytochrome P450-mediated oxidations (continued) • Can metabolize a large number of xenobiotics. • Various isoforms are present in a variety of tissues, each with diverse substrate specificities. • Heme protein that can bind oxygen. • Requires NADPH for catalytic activity. • Can also metabolize endogenous compounds, for example, steroid hormones, bile acids, vitamins, fatty acids. • Some isoforms also present in the mitochondria.
  • 28. • Hydroxylation of aliphatic or aromatic carbon. • Epoxidation of a double bond. • Heteroatom (S-, N-) oxygenation and N- hydroxylation. • Heteroatom dealkylation (Ex. ROR ROH or SR SH) • Ester cleavage • Dehydrogenation Cytochrome P450 catalyzes many types of reactions:
  • 29. Cytochrome P450-mediated epoxidation O O O O O H H Coumarin Coumarin-3,4-epoxide
  • 30. Cytochrome P450 – mediated hydroxylation COOH COOH OH CYP3A4 Lauric acid Hydroxylauric acid
  • 31. Cytochrome P450 – mediated dehydrogenation N C CH3 OH H O N C CH3 O O Acetaminophen NAPQI CYP2E1 CYP1A2 CYP3A4
  • 32. Chemical Interactions • Toxicity is influenced by chemical interactions.
  • 33. Chemical Interactions (Drug-drug interactions) • Potentiation => one chemical causes a another chemical to have greater effect than if given alone – Example: hepatotoxicity of acetaminophen is enhanced by ethanol + ®
  • 34. Chemical Interactions (Drug-drug interactions) • Potentiation => one chemical causes a another chemical to have greater effect than if given alone – Example: hepatotoxicity of acetaminophen is enhanced by ethanol + ® Induces CYP2E1
  • 35. Drugs which Modulate P450 Inducers Drug whose metabolism is enhanced Phenobarbital and other barbiturates Chloramphenicol, digitoxin, doxorubicin, estradiol, phenytoin, cortisol Omeprazole (Prilosec) or cigarette smoke Tricyclic antidepressants, propranolol warfarin, theophylline Rifampin Digitoxin, glucocorticoids, oral contraceptives, propanolol Ethanol acetaminophen Inhibitors Drug whose metabolism is inhibited Cimetidine (Tagamet) Diazepam, warfarin Ketoconazole (antifungals) Cyclosporine, terfenadine Grapefruit juice Tricyclic antidepressants, propranolol warfarin, theophylline
  • 36. Phase II A. Glucuronidation : UDP - glucuronic acid is the glucuronyl donor, and a variety of glucuronosyltransferases, present in both the endoplasmic reticulum and cytosol, are the catalysts. Molecules such as 2-acetylamino fluorene ( a carcinogen), aniline, benzoic acid, memprobamate (a tranquilizer), phenol, and many steroids are excreted as glucuronides. The glucuronide may be attached to oxygen, nitrogen , or sulfur groups of the substrates. Glucuronidation is probably the most frequent conjugation reaction
  • 37. B. Sulfation : Some alcohols, arylamines, and phenols are sulfated. The sulfate donor in these and other biologic sulfation reactions (eg : glycosaminoglycans, glycolipids) is adenosine 3’ - phosphate - 5’ - phosphosulfate (PAPS)
  • 38. C : Conjugation with glutathione : A number of potentially toxic electrophilic xenobiotics (such as certain carcinogens) are conjugated to the nucleophilic GSH in reactions that can be represented as follows R + GSH R ---- S ----- G Where R = an electrophilic xenobiotic. The enzymes catalyzing these reactions are called glutathione S- transferases and are present in high amounts in liver cytosol and in lower amounts in other tissues. A variety of glutathione S-transferases are present in human tissue. If the potentially toxic xenobiotics were not conjugated ato GSH, they would be free to combine covalently with DNA, RNA, or cell protein and could thus lead to serious cell damage.
  • 39. D - Other reactions : • Acetylation - Acetylation is represented by X + Acetyl-CoA Acetyl-X + CoA Where X represents a xenobiotic. As for other acetylation reactions, acetyl-CoA (active acetate) is the acetyl donor. These reactions are catalyzed by acetyltransferases present in the cytosol of various tissues, particularly liver. The drug isoniazid, used in the treatment of tuberculosis, is subject to acetylation. Polymorphic types of acetyltransferases exist, resulting in individuals who are classified as slow or fast acetylators,and influence the rate of clearance of drugs such as isoniazid from blood. Slow acetylators are more subject to certain toxic effects of isoniazid because the drug persists longer in these individuals.
  • 40. • Methylation : A few xenobiotics are subject to methylation by methyltransferases, employing S-adenosylmethionine as the methyl donor.