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Crop Growth Observers Required to Reach
Full Automation of a Greenhouse
Divas Karimanzira* and Thomas Rauschenbach
Fraunhofer IOSB, Am Vogelherd 90, 98693 Ilmenau, Germany
Opinion
In reality, greenhouse cultivation is an adaptive process, where the grower observes his
crops and adapt the environmental conditions accordingly through experience and guess
work. Manual observation and control are associated with sub-optimality and delays. To
achieve a fully automated greenhouse, a modified hierarchical control structure as shown in
Figure 1 adopted from Van Straten et al. [1] is required.
Figure 1: A modified version of the commonly used hierarchical control
structure of current greenhouse-crop systems (original version Van
Straten et al. [1]).
As shown in Figure 1, in the original control structure Van Straten et al. [1], crop growth
state observations (or predictions) are taken manually by experienced growers, rather than
sensors or computerized observers. Observers for energy/mass transportation are employed
to help controller make decisions, most existing greenhouse models focus on this topic.
However, data and information about the growth state of the crops (marked by a dotted line
rectangle) is rarely used by the controller. Another drawback is that in most of the physical
crop models that are used, typically requires a lot of parameters to be defined. The best
example is the tomato growth model, TOMGRO [2]. In version 3.0, it has 574 parameters. As
we know in control engineering, a vast number of parameters in the model is associated not
only with high computational load, but also poor model feasibility in applications [3].
In our opinion these drawbacks as identified above can only be addressed by a new
observer building strategy for greenhouse crop growth to be put in the rectangle marked by
the dotted line in Figure 1. Based on the information from the growth observer, and depending
on the size, type and structure of the greenhouse the controllers will manage factors such as,
vents, heating, cooling, lighting, temperature, CO2
, irrigation, roof to create optimal conditions
for the crops in real-time. Due to mis-controls of greenhouse environment, large economic
losses to growers may incur [4]. Fast and precision control responses based on the internal
and structural requirements of crops are essential, and the research of crop physiological
information embedded observer becomes crucial. Recently, there have been very encouraging
Crimson Publishers
Wings to the Research
Opinion
*Corresponding author: Divas
Karimanzira, Fraunhofer IOSB, Am
Vogelherd 90, 98693 Ilmenau, Germany
Submission: April 28, 2021
Published: May 04, 2021
Volume 8 - Issue 4
How to cite this article: Divas
Karimanzira, Thomas Rauschenbach. Crop
Growth Observers Required to Reach Full
Automation of a Greenhouse. Mod Concep
Dev Agrono. 8(4). MCDA. 000691. 2021.
DOI: 10.31031/MCDA.2021.08.000691
Copyright@ Divas Karimanzira. This
article is distributed under the terms of
the Creative Commons Attribution 4.0
International License, which permits
unrestricted use and redistribution
provided that the original author and
source are credited.
ISSN: 2637-7659
827
Modern Concepts & Developments in Agronomy
828
Mod Concep Dev Agrono Copyright © Divas Karimanzira
MCDA.000692. 8(4).2021
studies on sensing technologies for crop physiological information.
Misra et al. [5] & Ajigboye et al. [6] have shown that chlorophyll
fluorescence has become biological probes to investigate the
physical status of high plants such as wheat or tomatoes.
Therefore, our expectation is that chlorophyll fluorescence
and leaf gas exchanges parameters and other derived physiological
parameters can be used as a powerful tool to reveal crop growth
status in response to changes of greenhouse environmental
conditions [7] to enable adaptive control without the grower in
between.
Our proposed state observer modeling strategy for greenhouse
crop growth is to take a well proven crop physiological model such
as TOMGRO simulate it under optimal condition for crop growth,
collect data from it to create a Long-term memory (LSTM) based
reference model to be used as the observer. The data collected will
include physiological parameters photosynthesis, water potential,
and leaf gas exchange, and the environmental parameters such
as, temperature, CO2
concentration, Vapor Pressure Deficit (VPD),
lighting intensity etc., and the growth parameters will include plant
height, leaf area, fresh weight, and dry weight. The physiological
parameters and the environmental parameters will be used as the
inputs to the model and the growth parameters as the output of
the LSTM model. A LSTM is a Recurrent Neural Network (RNN)
architecture that is well-suited to classify, process and predict
time series given time lags of unknown duration. This makes LSTM
superior over alternative RNNs, hidden Markov models and other
sequence learning methods. A two-step method based on Long
Short-Term Memory (LSTM) will be used to detect when the control
behavior needs to be adjusted. In a first step, the LSTM is employed
to learn the normal time series patterns and to predict future
values of the optimally trained TOMGRO model. This is followed
by the anomaly detection in the second step, which is performed
by computing anomaly scores from the prediction errors. The first
results of the observer are shown in Figure 2.
Figure 2: Results of tomato growth observation for early warning.
Benefits of greenhouse automation using observers are vast
and plentiful, which include reduced the amount of work that
needs to be done manually, know exactly the current situation of
the greenhouse and make data driven decisions based on facts and
not assumptions, and increase quality and yield through precise
control, and learn from previous crop cycles.
References
1.	 Van Straten G, vanWilligenburg LG, Van Henten EJ, Van Ooteghem RJC
(2010) Optimal control of greenhouse cultivation. Boca Raton, FL: CRC
Press; Taylor & Francis, UK.
2.	 Jones JW, Kenig A, Vallejos CE (1999) Reduced state-variable tomato
growth model. Trans of the ASAE 42(1): 255-265.
3.	 Speetjens SL, Stigter JD, Van Straten G (2009) Towards an adaptive
model for greenhouse control. Comput Electron Agric 67(1-2): 1-8.
4.	 Moriyuki S, Fukuda H (2016) High-throughput growth prediction for
Lactuca sativa L. seedlings using chlorophyll fluorescence in a plant
factory with artificial lighting. Front Plant Sci 7: 394.
5.	 Misra AN, Misra M, Singh R (2012) “Chlorophyll fluorescence in plant
biology,” in Biophysics, Chapter 7, Misra AN (Ed.), (Shanghai: InTech),
China, pp: 171-192.
6.	 Ajigboye OO, Bousquet L, Murchie EH, Ray RV (2016) Chlorophyll
fluorescence parameters allow the rapid detection and differentiation
of plant responses in three different wheat pathosystems. Funct Plant
Biol 43(4): 356-369.
7.	 Nishina H (2015) Development of speaking plant approach technique
for intelligent greenhouse. Agric Agric Sci Proc 3: 9-13.
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The Cap Dualism-Efficiency or Competition

  • 1. Crop Growth Observers Required to Reach Full Automation of a Greenhouse Divas Karimanzira* and Thomas Rauschenbach Fraunhofer IOSB, Am Vogelherd 90, 98693 Ilmenau, Germany Opinion In reality, greenhouse cultivation is an adaptive process, where the grower observes his crops and adapt the environmental conditions accordingly through experience and guess work. Manual observation and control are associated with sub-optimality and delays. To achieve a fully automated greenhouse, a modified hierarchical control structure as shown in Figure 1 adopted from Van Straten et al. [1] is required. Figure 1: A modified version of the commonly used hierarchical control structure of current greenhouse-crop systems (original version Van Straten et al. [1]). As shown in Figure 1, in the original control structure Van Straten et al. [1], crop growth state observations (or predictions) are taken manually by experienced growers, rather than sensors or computerized observers. Observers for energy/mass transportation are employed to help controller make decisions, most existing greenhouse models focus on this topic. However, data and information about the growth state of the crops (marked by a dotted line rectangle) is rarely used by the controller. Another drawback is that in most of the physical crop models that are used, typically requires a lot of parameters to be defined. The best example is the tomato growth model, TOMGRO [2]. In version 3.0, it has 574 parameters. As we know in control engineering, a vast number of parameters in the model is associated not only with high computational load, but also poor model feasibility in applications [3]. In our opinion these drawbacks as identified above can only be addressed by a new observer building strategy for greenhouse crop growth to be put in the rectangle marked by the dotted line in Figure 1. Based on the information from the growth observer, and depending on the size, type and structure of the greenhouse the controllers will manage factors such as, vents, heating, cooling, lighting, temperature, CO2 , irrigation, roof to create optimal conditions for the crops in real-time. Due to mis-controls of greenhouse environment, large economic losses to growers may incur [4]. Fast and precision control responses based on the internal and structural requirements of crops are essential, and the research of crop physiological information embedded observer becomes crucial. Recently, there have been very encouraging Crimson Publishers Wings to the Research Opinion *Corresponding author: Divas Karimanzira, Fraunhofer IOSB, Am Vogelherd 90, 98693 Ilmenau, Germany Submission: April 28, 2021 Published: May 04, 2021 Volume 8 - Issue 4 How to cite this article: Divas Karimanzira, Thomas Rauschenbach. Crop Growth Observers Required to Reach Full Automation of a Greenhouse. Mod Concep Dev Agrono. 8(4). MCDA. 000691. 2021. DOI: 10.31031/MCDA.2021.08.000691 Copyright@ Divas Karimanzira. This article is distributed under the terms of the Creative Commons Attribution 4.0 International License, which permits unrestricted use and redistribution provided that the original author and source are credited. ISSN: 2637-7659 827 Modern Concepts & Developments in Agronomy
  • 2. 828 Mod Concep Dev Agrono Copyright © Divas Karimanzira MCDA.000692. 8(4).2021 studies on sensing technologies for crop physiological information. Misra et al. [5] & Ajigboye et al. [6] have shown that chlorophyll fluorescence has become biological probes to investigate the physical status of high plants such as wheat or tomatoes. Therefore, our expectation is that chlorophyll fluorescence and leaf gas exchanges parameters and other derived physiological parameters can be used as a powerful tool to reveal crop growth status in response to changes of greenhouse environmental conditions [7] to enable adaptive control without the grower in between. Our proposed state observer modeling strategy for greenhouse crop growth is to take a well proven crop physiological model such as TOMGRO simulate it under optimal condition for crop growth, collect data from it to create a Long-term memory (LSTM) based reference model to be used as the observer. The data collected will include physiological parameters photosynthesis, water potential, and leaf gas exchange, and the environmental parameters such as, temperature, CO2 concentration, Vapor Pressure Deficit (VPD), lighting intensity etc., and the growth parameters will include plant height, leaf area, fresh weight, and dry weight. The physiological parameters and the environmental parameters will be used as the inputs to the model and the growth parameters as the output of the LSTM model. A LSTM is a Recurrent Neural Network (RNN) architecture that is well-suited to classify, process and predict time series given time lags of unknown duration. This makes LSTM superior over alternative RNNs, hidden Markov models and other sequence learning methods. A two-step method based on Long Short-Term Memory (LSTM) will be used to detect when the control behavior needs to be adjusted. In a first step, the LSTM is employed to learn the normal time series patterns and to predict future values of the optimally trained TOMGRO model. This is followed by the anomaly detection in the second step, which is performed by computing anomaly scores from the prediction errors. The first results of the observer are shown in Figure 2. Figure 2: Results of tomato growth observation for early warning. Benefits of greenhouse automation using observers are vast and plentiful, which include reduced the amount of work that needs to be done manually, know exactly the current situation of the greenhouse and make data driven decisions based on facts and not assumptions, and increase quality and yield through precise control, and learn from previous crop cycles. References 1. Van Straten G, vanWilligenburg LG, Van Henten EJ, Van Ooteghem RJC (2010) Optimal control of greenhouse cultivation. Boca Raton, FL: CRC Press; Taylor & Francis, UK. 2. Jones JW, Kenig A, Vallejos CE (1999) Reduced state-variable tomato growth model. Trans of the ASAE 42(1): 255-265. 3. Speetjens SL, Stigter JD, Van Straten G (2009) Towards an adaptive model for greenhouse control. Comput Electron Agric 67(1-2): 1-8. 4. Moriyuki S, Fukuda H (2016) High-throughput growth prediction for Lactuca sativa L. seedlings using chlorophyll fluorescence in a plant factory with artificial lighting. Front Plant Sci 7: 394. 5. Misra AN, Misra M, Singh R (2012) “Chlorophyll fluorescence in plant biology,” in Biophysics, Chapter 7, Misra AN (Ed.), (Shanghai: InTech), China, pp: 171-192. 6. Ajigboye OO, Bousquet L, Murchie EH, Ray RV (2016) Chlorophyll fluorescence parameters allow the rapid detection and differentiation of plant responses in three different wheat pathosystems. Funct Plant Biol 43(4): 356-369. 7. Nishina H (2015) Development of speaking plant approach technique for intelligent greenhouse. Agric Agric Sci Proc 3: 9-13. For possible submissions Click below: Submit Article