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Chapter 3
Staining techniques
By: Ahmedmenewer (Msc
)
12/12/20191
Learning Objectives
At the end of this chapter, the student will be
able to:
 Explain the general principle of staining in blood
films in hematology
 Identify type of staining technique
 Describe the appearance of cells and cell
components stained blood films
12/12/20192
Outline
 Introduction
 Principle of staining
 Blood film(BF)
 Giemsa Stain
 Gram stain
 AFB stain
12/12/20193
Introduction
Stains (Dyes) are coloured chemical
compounds that
are used to selectively give colour to the
colourless structures of bacteria or other cells.
Bacterial staining is the process of giving
colour to the colourless structures (cell wall,
spore, etc) of the bacteria in order to make it
visible under the microscope.
12/12/20194
Uses of staining
1. To observe the morphology, size and
arrangement of cell
2. To differentiate one group of bacteria from
the other group.
Staining reactions are made possible because
of the
Physical phenomena of capillary osmosis,
solubility,
adsorption, and absorption of stains or dyes
by cells of
micro-organisms. 12/12/20195
Principle of Staining
 Acidic dyes such as eosin unite with the basic
components of the cell (cytoplasm)
 Conversely, basic stains like methylene blue are
attracted to and combine with the acidic parts of the
cell (nucleic acid and nucleoproteins of the nucleus.
 Other structures stained by combination of the two
are neutrophilic
12/12/20196
Steps for Blood Film
The shape of blood film
Examples of unacceptable
smears
Giemsa stain
 Employs various compounds (thionine and its
methyl derivative) with eosin and methylene blue
 Is an alcohol-based Romanowsky stain that
requires dilution in pH 7.1-7.2 buffered water
 It is excellent in staining malaria parasites in thick films.
12/12/201910
Indications of the different stains for
use
 Wright stain
 Peripheral smears
 Leishamn
 Peripheral smears
 Geimsa
 For malaria thick films
12/12/201911
 Cytoplasm
 Monocytes – gray blue with fine reddish granules
 Neutrophils: light pink with lilac (pale purple) granules
 Lymphocytes: varying shades of blue
 Malaria parasites – sky blue cytoplasm and red purple
chromatin
12/12/201912
Appearance of cells and cell components in -stained
blood films
Increased neutrophils count (neutrophilia)
1. Acute bacterial infection.
2. Many inflammatory processes.
3. During physical stress.
4. With tissue necrosis.
5. Granulocytic leukemia.
Decreased neutrophil count (neutropenia)
1. Typhoid fever
2. Brucellosis
3. Viral diseases, including hepatitis, influenza,
rubella, and mumps.
4. A great infection can also deplete the bone
marrow of neutrophils.
5. Many drugs used to treat cancer produce bone
6. marrow depression.
Bacteriological staining
 Why we need to make smears?
 Making smear is a precondition to facilitate
staining and further observation of
microorganisms under microscope.
 Without making appropriate smear, which is thin
enough to make a single layer of bacteria, it is
difficult to observe and read different staining
reactions of bacteria. .
12/12/201916
Preparing smear
 If smears are to provide reliable information they must be
prepared, labeled and fixed correctly prior to being
stained.
Labeling Slides
 Every slide must be labeled clearly with the date and the
patients name and number. When ever possible, smears
should be spread on slides which have one end frosted
for labeling
 A lead pencil should be used for writing on the
frosted area. Because pencil marks unlike grease
pencil marks, will not be washed off during the
staining processes.
12/12/201917
The thickness of the smear should allow to read a text when
placed under the smear.
12/12/201918
PRINCIPLE OF STAINING IN
BACTERIOLOGY
 Even with the microscope, bacteria are difficult to see
unless they are treated in a way that increases contrast
between the organisms and their background.
 The most common method to increase contrast is to
stain part or all of the microbe.
12/12/201919
 The cellular components of mammalian as well as
microbial cell are different.
 For example the nuclei of cell is negatively charged
because of the presence of acidic component (DNA)
hence it combines with positively charged compounds,
(basic dyes). and the cytoplasm parts of a cell is
generally positively charged therefore combines with
negatively charged compounds (acidic dyes).
12/12/201920
PRINCIPLE OF STAINING IN
BACTERIOLOGY
GRAM’S STAIN
 This method was developed by the Danish
bacteriologist
Christian Gram in 1984.
Basic concepts:
 Most bacteria are differentiated by their gram reaction
due to differences in their cell wall structure.
 The surface of bacterial cell has got a negative
charge due to the presence of polysaccharides and
lipids (PG) this has made the surface of the bacteria
to have affinity to cationic or basic dyes (when the
colouring part is contained in the basic part.)
12/12/201921
Principle of Gram’s stain
 The principle of Gram’s stain is that cells are first fixed to
slide by heat or alcohol and stained with a basic dye (e.g.
crystal violate), which is taken up in similar amounts by all
bacteria.
The slides are then treated with an Gram’s iodine
(iodine KI mixture) to fix (mordant) the crystal violet stain
on Gram positive bacteria, decolorized with acetone or
alcohol, and finally counter stained with Safranin.
12/12/201922
Gram positive bacteria
 Gram positive bacteria: - stain dark purple with
crystal violet and are not decolorized by acetone or
ethanol. The following are some important examples
of gram positive bacteria.
 Staphylococcus,
 Streptococcus,
 Clostridium
 Bacillus
 Corynebacterium …
 N.B. The reason for the retention of the primary
stain (CV) by the gram positive bacteria after
decolorization is due to the presence of more acidic
protoplasm (PG layer) of these organisms which
bind to the basic dye.
12/12/201923
Gram negative bacteria
Gram negative bacteria: - stain red because
after being stained with crystal violet they are
decolorized by acetone or ethanol and take up
red counter stain. (Neutral red, Safranin or
dilute carbol fuchsin).
 The following are some important gram
negative bacteria:-
 Nesseria spp.
 Haemophilus spp.
 Salmonella, shigella, vibrio, Klebsilla, Coliforms
…etc.
12/12/201924
Reagents for Gram stain
Required reagents
 Crystal violet
 Gram’s Iodine
 Acetone-Alcohol or 95% Alcohol
 Safranin or Neutral red
12/12/201925
Results of Gram’s stained smear
Results
 Gram positive bacteria …..………………….. Purple(blue)
 Yeast cells ……………………………………. Dark purple
 Gram negative bacteria …….……………….. Pale to red
 Nuclei of pus cell …….………….…………… Red
 Epithelia cells …………………………………. Pale red
12/12/201926
Figure: Gram positive and Gram negative bacteria
12/12/201927
Report of Gram’s stained smear
1. Number of bacteria present whether many, moderate, few or
scanty
2. Gram reaction of the bacteria whether Gram positive or
Gram negative
3. Morphology and arrangement of the bacteria whether cocci,
diplococci, streptococci, rods, or coccobacili; also whether
the organisms are intracellular.
4. Presence and number of pus cells.
5. Presence of yeast cells and epithelia cells.
Example of a gram stain report 12/12/201928
Ziehl-Neelson (Acid fast Bacilli-AFB) staining
method
 Ziehl-Neelson stain is used for staining mycobacteria
which are hardly stained by Gram‘s staining method.
 Once the Mycobacteria is stained with primary stain it
can not be decolorized with acid, so named as acid-fast
bacteria.
12/12/201929
- Mycobacteria typically are slightly bent or curved slender
rods. About 2um- 4 um long and 0.2 um – 0.5 um wide.
- The most striking chemical feature of mycobacteria is their
extra ordinary high lipid content in the cell wall (up to 60%
of its dry weight). This high lipid content probably accounts
for some of the other unusual properties of mycobacteria.
E.g Relative impermeability to stains, acid fastness, unusual
resistance to killing by acid and alkali.
 The cell wall of Mycobacteria also contains a peptido-
glycan layer, glycolipids, protein and Mycolic acid(This is
unique to mycobacteria, nocardiae and corynebacteria).
12/12/201930
Ziehl- Neelson (Acid fast Bacilli-AFB) staining
method
Principle of Ziehl-Neelson (Acid fast) staining method
 Sputum smear is heat –fixed, flooded with a solution of
carbilfusin (a mixture of basic fuschin and phenol) and
heated until steam rises. The heating which facilitate
penetration (entrance) of the primary stain into the
bacterium.
 After washing with water, the slide is covered with 3% HCl
(decolourizer). Then washed with water and flooded with
methylene blue ( Mycobacterium tuberculosis) and
malachite green (Mycobacterium leprae).
12/12/201931
Photogenic Mycobacteria
1. Tubercle bacilli
- M. tuberculosis (human tubercle type)
- M. bovis (bovine type)
2. Leprosy bacilli
- M. leprae
- M. lepraemurium
3. Environmental mycobacteria (atypical, anonymous)
mycobacteria
- M. avium- intercellulare
- M. xenopi etc
12/12/201932
Materials for AFB staining
 Sputum container (for M. tuberculosis) – for sample collection
 Wire loop or applicator stick – to spread sputum on the microscope
slide
 Microscope slide – for making smears
 Marking pen – to put identification number on the microscope slide
 Forceps- to hold smeared slide
 Bunsen burner or sprit lamp – to fix the smeared slide and to flame
the smear during staining.
 Staining racks (staining rods) – for staining.
 Slide rack – to place stained slide to dry in the air
 Ziehel – Neelson (AFB) stain - Carbolfuchsin
- 3% Acid alcohol
- Methylene blue (malachite green)
12/12/201933
M. tuberculosis
 Most infections with M. tuberculosis are caused by
inhaling cough droplets or dust particles containing
tubercle bacilli which become lodged in the lung
forming a small inflammatory lesion and cause
Pulmonary tuberculosis.
 Infected droplets remain air born for considerable
time, and may be inhaled by susceptible persons
 Tuberculosis is a disease of global importance. One
third of the world’s population is estimated to have
been infected with M. tuberculosis and eight million
new cases of tuberculosis arise each year.
12/12/201934
M. bovis
 Is found mainly as a pathogen in a cattle and
occasionally in other animals.
 Humans become infected by close contact
with infected cattle or by ingesting the
organisms in raw un treated milk.
 Person to person transmission of bovine
strains may also occur.
12/12/201935
M. Leprae
 causes leprosy, a chronic infectious disease that affects
the skin, peripheral nerves, mucosa of the upper
respiratory tact and the eye.
 It is mainly transmitted via the respiratory tract or skin
and has a long period of incubation(2 – 5 years) or
latency
Environmental Mycobacteria –
 are the most frequent causes of pulmonary infections resembling
tuberculosis, and disseminated disease and also cause lymphadenitis
(mainly in children).
 Such species are acid fast but differ from the M. tuberculosis complex
by being opportunistic pathogens, with limited distribution and
acquired from the environment. E.g Soil or water.
12/12/201936
Other forms of tuberculosis
 Tuberculous meningitis – when tubercle bacilli
reach the meninges through blood and affect
the meninge.
 Miliary tuberculosis: - Wide spread miliary
infection (liver, spleen & lymph glands)
 Renal and urogental tuberculosis
 Bone and joint tuberculosis
12/12/201937
Results of AFB STAIN
 AFB............. Red, straight or slightly curved rods,
occurring single or in a small groups
 Cells......................................... Blue
 Background Material ……….. Blue
12/12/201938
Fig. AFB under the microscope
Report of Sputum Smear
 When any definite red bacilli are seen report the
smear as AFB positive and give an indication of the
number of bacteria present as follows:
When
1- 9 AFB /100 fields --------------- report the exact
number
10 – 100 AFB/100 fields ------------------ report +
1 – 10 AFB/field --------------------------- report ++
More than 10 AFB/field ------------------ report +++
12/12/201939
12/12/201940
Thank you

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staining in medical laboratory

  • 1. Chapter 3 Staining techniques By: Ahmedmenewer (Msc ) 12/12/20191
  • 2. Learning Objectives At the end of this chapter, the student will be able to:  Explain the general principle of staining in blood films in hematology  Identify type of staining technique  Describe the appearance of cells and cell components stained blood films 12/12/20192
  • 3. Outline  Introduction  Principle of staining  Blood film(BF)  Giemsa Stain  Gram stain  AFB stain 12/12/20193
  • 4. Introduction Stains (Dyes) are coloured chemical compounds that are used to selectively give colour to the colourless structures of bacteria or other cells. Bacterial staining is the process of giving colour to the colourless structures (cell wall, spore, etc) of the bacteria in order to make it visible under the microscope. 12/12/20194
  • 5. Uses of staining 1. To observe the morphology, size and arrangement of cell 2. To differentiate one group of bacteria from the other group. Staining reactions are made possible because of the Physical phenomena of capillary osmosis, solubility, adsorption, and absorption of stains or dyes by cells of micro-organisms. 12/12/20195
  • 6. Principle of Staining  Acidic dyes such as eosin unite with the basic components of the cell (cytoplasm)  Conversely, basic stains like methylene blue are attracted to and combine with the acidic parts of the cell (nucleic acid and nucleoproteins of the nucleus.  Other structures stained by combination of the two are neutrophilic 12/12/20196
  • 8. The shape of blood film
  • 10. Giemsa stain  Employs various compounds (thionine and its methyl derivative) with eosin and methylene blue  Is an alcohol-based Romanowsky stain that requires dilution in pH 7.1-7.2 buffered water  It is excellent in staining malaria parasites in thick films. 12/12/201910
  • 11. Indications of the different stains for use  Wright stain  Peripheral smears  Leishamn  Peripheral smears  Geimsa  For malaria thick films 12/12/201911
  • 12.  Cytoplasm  Monocytes – gray blue with fine reddish granules  Neutrophils: light pink with lilac (pale purple) granules  Lymphocytes: varying shades of blue  Malaria parasites – sky blue cytoplasm and red purple chromatin 12/12/201912 Appearance of cells and cell components in -stained blood films
  • 13.
  • 14.
  • 15. Increased neutrophils count (neutrophilia) 1. Acute bacterial infection. 2. Many inflammatory processes. 3. During physical stress. 4. With tissue necrosis. 5. Granulocytic leukemia. Decreased neutrophil count (neutropenia) 1. Typhoid fever 2. Brucellosis 3. Viral diseases, including hepatitis, influenza, rubella, and mumps. 4. A great infection can also deplete the bone marrow of neutrophils. 5. Many drugs used to treat cancer produce bone 6. marrow depression.
  • 16. Bacteriological staining  Why we need to make smears?  Making smear is a precondition to facilitate staining and further observation of microorganisms under microscope.  Without making appropriate smear, which is thin enough to make a single layer of bacteria, it is difficult to observe and read different staining reactions of bacteria. . 12/12/201916
  • 17. Preparing smear  If smears are to provide reliable information they must be prepared, labeled and fixed correctly prior to being stained. Labeling Slides  Every slide must be labeled clearly with the date and the patients name and number. When ever possible, smears should be spread on slides which have one end frosted for labeling  A lead pencil should be used for writing on the frosted area. Because pencil marks unlike grease pencil marks, will not be washed off during the staining processes. 12/12/201917
  • 18. The thickness of the smear should allow to read a text when placed under the smear. 12/12/201918
  • 19. PRINCIPLE OF STAINING IN BACTERIOLOGY  Even with the microscope, bacteria are difficult to see unless they are treated in a way that increases contrast between the organisms and their background.  The most common method to increase contrast is to stain part or all of the microbe. 12/12/201919
  • 20.  The cellular components of mammalian as well as microbial cell are different.  For example the nuclei of cell is negatively charged because of the presence of acidic component (DNA) hence it combines with positively charged compounds, (basic dyes). and the cytoplasm parts of a cell is generally positively charged therefore combines with negatively charged compounds (acidic dyes). 12/12/201920 PRINCIPLE OF STAINING IN BACTERIOLOGY
  • 21. GRAM’S STAIN  This method was developed by the Danish bacteriologist Christian Gram in 1984. Basic concepts:  Most bacteria are differentiated by their gram reaction due to differences in their cell wall structure.  The surface of bacterial cell has got a negative charge due to the presence of polysaccharides and lipids (PG) this has made the surface of the bacteria to have affinity to cationic or basic dyes (when the colouring part is contained in the basic part.) 12/12/201921
  • 22. Principle of Gram’s stain  The principle of Gram’s stain is that cells are first fixed to slide by heat or alcohol and stained with a basic dye (e.g. crystal violate), which is taken up in similar amounts by all bacteria. The slides are then treated with an Gram’s iodine (iodine KI mixture) to fix (mordant) the crystal violet stain on Gram positive bacteria, decolorized with acetone or alcohol, and finally counter stained with Safranin. 12/12/201922
  • 23. Gram positive bacteria  Gram positive bacteria: - stain dark purple with crystal violet and are not decolorized by acetone or ethanol. The following are some important examples of gram positive bacteria.  Staphylococcus,  Streptococcus,  Clostridium  Bacillus  Corynebacterium …  N.B. The reason for the retention of the primary stain (CV) by the gram positive bacteria after decolorization is due to the presence of more acidic protoplasm (PG layer) of these organisms which bind to the basic dye. 12/12/201923
  • 24. Gram negative bacteria Gram negative bacteria: - stain red because after being stained with crystal violet they are decolorized by acetone or ethanol and take up red counter stain. (Neutral red, Safranin or dilute carbol fuchsin).  The following are some important gram negative bacteria:-  Nesseria spp.  Haemophilus spp.  Salmonella, shigella, vibrio, Klebsilla, Coliforms …etc. 12/12/201924
  • 25. Reagents for Gram stain Required reagents  Crystal violet  Gram’s Iodine  Acetone-Alcohol or 95% Alcohol  Safranin or Neutral red 12/12/201925
  • 26. Results of Gram’s stained smear Results  Gram positive bacteria …..………………….. Purple(blue)  Yeast cells ……………………………………. Dark purple  Gram negative bacteria …….……………….. Pale to red  Nuclei of pus cell …….………….…………… Red  Epithelia cells …………………………………. Pale red 12/12/201926
  • 27. Figure: Gram positive and Gram negative bacteria 12/12/201927
  • 28. Report of Gram’s stained smear 1. Number of bacteria present whether many, moderate, few or scanty 2. Gram reaction of the bacteria whether Gram positive or Gram negative 3. Morphology and arrangement of the bacteria whether cocci, diplococci, streptococci, rods, or coccobacili; also whether the organisms are intracellular. 4. Presence and number of pus cells. 5. Presence of yeast cells and epithelia cells. Example of a gram stain report 12/12/201928
  • 29. Ziehl-Neelson (Acid fast Bacilli-AFB) staining method  Ziehl-Neelson stain is used for staining mycobacteria which are hardly stained by Gram‘s staining method.  Once the Mycobacteria is stained with primary stain it can not be decolorized with acid, so named as acid-fast bacteria. 12/12/201929
  • 30. - Mycobacteria typically are slightly bent or curved slender rods. About 2um- 4 um long and 0.2 um – 0.5 um wide. - The most striking chemical feature of mycobacteria is their extra ordinary high lipid content in the cell wall (up to 60% of its dry weight). This high lipid content probably accounts for some of the other unusual properties of mycobacteria. E.g Relative impermeability to stains, acid fastness, unusual resistance to killing by acid and alkali.  The cell wall of Mycobacteria also contains a peptido- glycan layer, glycolipids, protein and Mycolic acid(This is unique to mycobacteria, nocardiae and corynebacteria). 12/12/201930 Ziehl- Neelson (Acid fast Bacilli-AFB) staining method
  • 31. Principle of Ziehl-Neelson (Acid fast) staining method  Sputum smear is heat –fixed, flooded with a solution of carbilfusin (a mixture of basic fuschin and phenol) and heated until steam rises. The heating which facilitate penetration (entrance) of the primary stain into the bacterium.  After washing with water, the slide is covered with 3% HCl (decolourizer). Then washed with water and flooded with methylene blue ( Mycobacterium tuberculosis) and malachite green (Mycobacterium leprae). 12/12/201931
  • 32. Photogenic Mycobacteria 1. Tubercle bacilli - M. tuberculosis (human tubercle type) - M. bovis (bovine type) 2. Leprosy bacilli - M. leprae - M. lepraemurium 3. Environmental mycobacteria (atypical, anonymous) mycobacteria - M. avium- intercellulare - M. xenopi etc 12/12/201932
  • 33. Materials for AFB staining  Sputum container (for M. tuberculosis) – for sample collection  Wire loop or applicator stick – to spread sputum on the microscope slide  Microscope slide – for making smears  Marking pen – to put identification number on the microscope slide  Forceps- to hold smeared slide  Bunsen burner or sprit lamp – to fix the smeared slide and to flame the smear during staining.  Staining racks (staining rods) – for staining.  Slide rack – to place stained slide to dry in the air  Ziehel – Neelson (AFB) stain - Carbolfuchsin - 3% Acid alcohol - Methylene blue (malachite green) 12/12/201933
  • 34. M. tuberculosis  Most infections with M. tuberculosis are caused by inhaling cough droplets or dust particles containing tubercle bacilli which become lodged in the lung forming a small inflammatory lesion and cause Pulmonary tuberculosis.  Infected droplets remain air born for considerable time, and may be inhaled by susceptible persons  Tuberculosis is a disease of global importance. One third of the world’s population is estimated to have been infected with M. tuberculosis and eight million new cases of tuberculosis arise each year. 12/12/201934
  • 35. M. bovis  Is found mainly as a pathogen in a cattle and occasionally in other animals.  Humans become infected by close contact with infected cattle or by ingesting the organisms in raw un treated milk.  Person to person transmission of bovine strains may also occur. 12/12/201935
  • 36. M. Leprae  causes leprosy, a chronic infectious disease that affects the skin, peripheral nerves, mucosa of the upper respiratory tact and the eye.  It is mainly transmitted via the respiratory tract or skin and has a long period of incubation(2 – 5 years) or latency Environmental Mycobacteria –  are the most frequent causes of pulmonary infections resembling tuberculosis, and disseminated disease and also cause lymphadenitis (mainly in children).  Such species are acid fast but differ from the M. tuberculosis complex by being opportunistic pathogens, with limited distribution and acquired from the environment. E.g Soil or water. 12/12/201936
  • 37. Other forms of tuberculosis  Tuberculous meningitis – when tubercle bacilli reach the meninges through blood and affect the meninge.  Miliary tuberculosis: - Wide spread miliary infection (liver, spleen & lymph glands)  Renal and urogental tuberculosis  Bone and joint tuberculosis 12/12/201937
  • 38. Results of AFB STAIN  AFB............. Red, straight or slightly curved rods, occurring single or in a small groups  Cells......................................... Blue  Background Material ……….. Blue 12/12/201938 Fig. AFB under the microscope
  • 39. Report of Sputum Smear  When any definite red bacilli are seen report the smear as AFB positive and give an indication of the number of bacteria present as follows: When 1- 9 AFB /100 fields --------------- report the exact number 10 – 100 AFB/100 fields ------------------ report + 1 – 10 AFB/field --------------------------- report ++ More than 10 AFB/field ------------------ report +++ 12/12/201939