This document summarizes a study that uses coarse-grained molecular dynamics (MD) simulations to model the coordination between competing RNA base pairs. The study uses two RNA systems, each with two separated complementary strands, to test the coarse-grained model. For the first system, the simulation showed little conformational change, but the second system indicated a base pairing interaction as the RMSD sharply decreased partway through the simulation, suggesting the strands bent back together. The coarse-grained model reduces computational expenses compared to all-atom MD while optimizing accuracy and speed for simulating macromolecules like RNA, which could aid drug development efforts.