Next-Generation Science Journals: Challenges and Opportunities by Janet Carter, UCLA Louise M. Darling Biomedical Library
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Friday, November 5, 2010 3:10 - 4:00 PM JoVE, Journal of Visualized Experiments, is the first PubMed-indexed video methods journal in biology. Join a publisher and co-founder of JoVE and a senior collection management librarian in a discussion on next generation science journals: marketing and distribution of non-traditional online publications, licensing and subscription issues, and the challenges related to the acceptance of these publications within the library community. During the session, we will engage the audience aiming to answer questions such as: how next-generation publishers can help the library community to recognize the value of novel tools for the faculty, researchers, and students.
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Next-Generation Science Journals: Challenges and Opportunities by Janet Carter, UCLA Louise M. Darling Biomedical Library
- 1. NEXT- GENERATION SCIENCE JOURNALS CHALLENGES & OPPORTUNITIES JANET D. CARTER UCLA LOUISE M. DARLING BIOMEDICAL LIBRARY 2010 CHARLESTON CONFERENCE NOVEMBER 5, 2010
- 2. 8 About UCLA Biomedical Sciences Neuroscience Building Calif Nanosystems
- 3. Federal Grants US Dept of Transportation, 0.11, 0% US Dept of Commerce, 0.36, 0% US Dept of Energy, 10.58, 2% National Aeronautics Space Admin., 12.33, 2% US Dept of Education, 16.41, 3% US Dept of Defense, 28.41, 5% Other Federal, 40.00, 7% National Science Foundation, 52.95, 9% US Dept of Health and Human Services, 425.10, 72% Awards By Federal Sponsors FY 2006-2007 (In Millions) 5
- 4. Funding Mechanism Amount Number Other $1,575,940 4 Fellowships $2,158,239 65 Training $12,821,950 55 Research Grants $364,874,327 750 Total $384,430,456 874 UCLA NIH Awards 2009
- 6. Biomedical Research Minor Biomedical Research 5HA - Biomedical Research: Concepts and Strategies. In this course, outstanding research faculty from the Medical School and College are invited to give a seminar on cutting edge research recently conducted in their laboratory. Each seminar is videotaped and used as an entry point for a series of lectures by the instructor that center on concepts and experimental approaches relevant to the seminar. Life Sciences 10H - Research Training in Genes, Genetics and Genomics. This discovery-based research course gives students hands-on experience with laboratory research in Drosphila genetics. Sponsored by Dr. Utpal Banerjee's HHMI Professors Award, LS 10H has already yielded publications in some major science journals with an unprecedented list of authors that includes over 150 undergraduates.
- 8. Louise M. Darling Biomedical Library • School of Medicine • School of Nursing • School of Public Health • Life Sciences Division • Related Research Institutes & Centers • UCLA Medical Center
- 9. Louise M. Darling Biomedical Library • Life Sciences Division – Ecology and Evolutionary Biology – Microbiology Immunology, & Molecular Genetics – Molecular Cell & Developmental Biology – Physiological Science – Psychology • Interdepartmental Programs
- 10. LS10H Seminar • Drosophila as a Disease Model • Genetics and Genomics Libguide: http://guides.library.ucla.edu/genetics_genomics • Protocols & Methods • PubMed, BIOSIS, & WoS
- 11. Publications Research Training in Genes, Genetics and Genomics • Chen J, Call G, Milchanowski A, Banerjee U, et al. (2005) Discovery-based science education: functional genomic dissection in Drosophila by undergraduate researchers. PLoS Biology 3(2):59. PMID: 15719063; PMC548953 • Call GB, Olson JM, Chen J, (252 undergraduate authors), Banerjee U. (2007) Genomewide clonal analysis of lethal mutations in the Drosophila melanogaster eye: comparison of the X chromosome and autosomes. Genetics 177(2):689-97. PMCID: PMC2034635
- 12. Publications Research Training in Genes, Genetics and Genomics • Evans C, Olson J, Ngo K, Kim E, Lee N, Kuoy E, Patananan A, Sitz D, Tran P, Do M, Yackle K, Cespedes A, Hartenstein V, Call G, Banerjee U. (2009) G-TRACE rapid Gal4-based cell lineage analysis in Drosophila. Nature Methods 6(8):603-605. PMID: 19633663; PMC2754220 • Sinenko SA, Hung T, Moroz T, Tran QM, Sidhu S, Cheney MD, Speck NA, Banerjee U. (2010) Genetic manipulation of AML1-ETO-induced expansion of hematopoietic precursors in a Drosophila model. Blood. 2010 Aug 5. [Epub ahead of print]. PMID: 20688956
- 13. Publications Research Training in Genes, Genetics and Genomics • Ngo KT, Wang J, Junker M, Kriz S, Vo G, Asem B, Olson JM, Banerjee U, Hartenstein V. (2010) Concomitant requirement for Notch and Jak/Stat signaling during neuro-epithelial differentiation in the Drosophila optic lobe. Dev Biol. Oct 15;346(2):284-95. Epub 2010 Aug 6. • Yavari A, Nagaraj R, Owusu-Ansah E, Folick A, Ngo K, Hillman T, Call G, Rohatgi R, Scott MP, Banerjee U. (2010) Role of lipid metabolism in smoothened derepression in hedgehog signaling. Dev Cell. Jul 20;19(1):54-65.
- 14. How Do We Decide to License Journals • How new is the journal, is it indexed by an article database (PubMed, BIOSIS, WoS, Scopus)? • Faculty and/or student recommendations vs Direct mass marketing strategies by the Publisher/Vendor • Any ILL borrowing history • Costs – can our budget support the subscription • Licensing agreement elements
- 15. Licensing Guidelines • California Digital Library Information for Vendors http://www.cdlib.org/ • CDL Licensing Process: Provides an overview of the process for acquiring digital resources • CDL Licensing Guidelines for Vendors – CDL Standard Agreements and Checklists – CDL standard license agreement – License agreement checklist
- 16. Renewal Issues • UC or UCLA Faculty on Editorial Board(s) • UC or UCLA Faculty publishing in the Journal • Usage Statistics: How often, What is being counted, What Standards are used? • Bibliometric data: Impact Factor , SNIP, Eigenfactor • Business Model changes • Faculty Input
- 17. JoVE Usage Statistics Definitions • Number of Visitors The number of unique visitors. If multiple requests are made from the same IP address within 1 hour, the user is considered to be a single visitor. • Activity is the total number of requests made during that time. This includes requests for articles as well as dynamic requests for page resources.
- 18. UCLA JoVE Usage Statistics June 2009-August 2010 • Number of Visitors: 6,258 • Activity: 87, 797 – Counter Compliant? Where are we? – View of actual video articles – View of PDF articles – Searching sessions
- 19. UCLA & UC Authors • 2007-2010 [PubMed Search] – 108 UC authors – 18 UCLA authors • SOM: Depts. of Neurology; Physiology; Psychiatry & Behavioral Sciences • Ecology and Evolutionary Biology • Molecular Cell & Developmental Biology • Physiological Sciences • Electrical Engineering
- 20. Bibliometrics Journal of Visualized Experiments JoVE • WoS - Not indexed J Vis Exp searchable in Cited Search – 270 Cited Reference Search Results – Not listed in Journal Citation Reports (JCR) • SCOPUS - Indexed • Scopus Journal Analyzer – SJR 0.071 – SNIP 0.090
- 22. NISO & Other Guidelines • Best Practices for Ejournals: Publication and Website Design Guidelines http://www.library.vanderbilt.edu/ercelawn/bestpractices.htm • Hawkins, Les. (2009) Best Practices for Presentation of E-journal Titles on Provider Web Sites and in Other E-content Products . Serials Review .Sept.; 35(3): 168-169 • NISO PIE-J (Presentation & Identification of E-Journals) Working Group http://www.niso.org/workrooms/piej
- 23. It’s a complicated world – any questions? • Janet D. Carter jcarter@library.ucla.edu
Editor's Notes
- About UCLA: http://www.ucla.edu/about.html UCLA is California's largest university, with an enrollment of more than 38,000 undergraduate and graduate students. The UCLA College of Letters and Science and the university's 11 professional schools feature renowned faculty and offer 328 degree programs and majors. Teaching faculty: 4,016 Enrollment 26,536 undergraduates, 12,716 graduates and professional (Fall 2008) College of Letters and Science and 11 professional schools Degree Programs: 118 undergraduate, 200 graduate UCLA ranks among the nation's top five institutions in research funding. This ensures a dynamic and broad array of research opportunities for students in every field. UCLA is a science powerhouse. The School of Medicine and UCLA's premiere research hospital provide access to biomedical research projects. Research strengths extend to the other sciences, arts in all forms, humanities, and social sciences. UCLA's research centers and institutes offer students the opportunity to work with faculty in an atmosphere of inquiry and discovery. Explore some of UCLA's premiere research centers, below: Broad Center of Regenerative Medicine and Stem Cell Research California Center for Population Research California NanoSystems Institute Center for Chinese Studies Center for Embedded Networked Sensing Center for Medieval and Renaissance Studies Center for Society and Genetics Center for the Study of Urban Poverty Institute for Pure and Applied Mathematics Institute of the Environment
- UCLA Undergraduate Research Center: http://www.ugeducation.ucla.edu/urhass/ Minority Access to Research Careers Undergraduate Student Training in Research (MARC U*STAR) The MARC U*Star Program is an NIH funded honors program intended to prepare highly able minority students for graduate programs at outstanding universities throughout the United States. The MARC U*Star Program pays partial tuition and provides students with stipends to undertake research projects in UCLA faculty laboratories during the academic year. Students are also funded to participate in laboratory research at other universities during the summer. Trainees are encouraged to give oral and poster presentations of their research at local and national conferences. Trainees also receive special mentoring and preparation via counseling, journal clubs, workshops and honors courses. The Howard Hughes Undergraduate Research Program (HHURP) is intended for students planning to pursue graduate studies in the biomedical sciences The HHURP offers UCLA students the opportunity to work closely with faculty on biomedical research topics during the academic year and summer. Because the HHURP in an intensive research program, students are expected to spend a minimum of 10 hours per week in a laboratory
- About the Biomedical Research Minor The UCLA Minor in Biomedical Research was officially launched in Spring 2007. Conceived by Prof. Utpal Banerjee and Dean Fred Eiserling as a logical extension of Dr. Banerjee's highly successful HHMI Professors program, the Undergraduate Research Consortium in Functional Genomics (URCFG; www.bruinfly.ucla.edu), the Minor was designed to make laboratory research a core part of the scientific curriculum as early as the first year of college. Independent research is complemented by coursework that develops important skills such as critical thinking, analysis of research literature and data presentation. In addition, an ethics and social science component trains students to recognize the political, social and philosophical issues facing science today. The UCLA Minor in Biomedical Research was made possible by generous support from the Howard Hughes Medical Institute.
- Undergrad journal hosted and archived by the UCLA Library's Digital Library Program
- Interdepartmental programs: LS, Chemistry, Physics, SOM, School of Engineering ,etc. Bioinformatics Center for Society and Genetics Computational and Systems Biology Minor in Biomedical Research Molecular Biology Molecular, Cell and Integrative Biology (ACCESS) Molecular, Cell and Integrative Physiology Neuroscience
- Drosophila as a Disease Model or Genetic Model Eye Diseases Parkinsons Other Nervous system diseases/manifestations Enhancer trasp and gene expreassion FLP/FRT
- Message fro John Olson, Oct. 25, 2010: Here are two other publications. Eight undergraduates are represented in the authors list and both papers have first authors that did the research as undergraduates. Both of them graduated before the papers came out, but the work was conducted when they were undergrads.
- CDL web site: http://www.cdlib.org/ and follow the Information Gateway link for Vendors
- CDL web site: http://www.cdlib.org/ and follow the Information Gateway link for Vendors
- SJR: weighted citations per document SCImago Journal Rank (SJR) , is a measure of the scientific prestige of scholarly sources: value of weighted citations per document. A source transfers its own 'prestige', or status, to another source through the act of citing it. A citation from a source with a relatively high SJR is worth more than a citation from a source with a lower SJR. For more information on SNIP: SNIP = Source normalized impact per paper: corrects for differences in the frequency of citation across research fields Source Normalized Impact per Paper (SNIP) measures contextual citation impact by weighting citations based on the total number of citations in a subject field. The impact of a single citation is given higher value in subject areas where citations are less likely, and vice versa Citations: Total number of citations received by a journal in the year, considering all documents. Documents: Total number of documents published in the journal in the year. % Not Cited: Percentage of documents published in that year that have never been cited to date.
- Concerns regarding the new JoVE publishing business model [author fees & increasing library subscriptions] Adding new section that require separate pricing [jump in cost by 2/3’s Jove Neuroscience Jove Immunology Not considering these to be new journals with separate ISSNs : PubMed indexing issues & ability for faculty and researchers to locate the articles. [CHAOS] PubMed Indexing policy