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Presentation On
Modeling of Microfluidics Devices
Presented By:
Awesh Kumar Singh
PhD Scholar
 Contents
 Some Basic Definition
 Classification of Designing/ SIMULATION process

 Electrokinetics in microfluidics
 Electroosmosis
 Electroosmotic flow is defined as when the solid surfaces of microchannel
acquire electrostatic charges when they are in contact with an aqueous solution,
The surface charge in turn attracts the counter-ions in the liquid to the region
close to the surface, forming the electric double layer (EDL). Under a
tangentially applied electric field, the excess counter-ions in the double layer
region move to resulting in a bulk liquid motion via viscous effect.
 The electroosmotic flow of incompressible liquids can be described by the
Navier–Stokes equations.
 Electrophoresis
 Electrophoresis is defined as when motion of the charged particles relative to
surrounding liquid under an applied electric field . When a charged colloidal
particle or molecule suspended in an electric field, it will experience a lateral
electric force due this force liquid will flow.
 Dielectrophoresis
 Dielectrophoresis(DEP) is defined as the movement of a neutral but
polarizable particle when it is subjected to a non-uniform electric field due to the
interaction of the particle's dipole and spatial gradient of the electric field, and
produce moment ,due to which liquid will flow.
 The electric field can be produced by either a direct current (DC) or
alternating current (AC) but non-uniform.
 Using DEP, manipulation of particles can be realized by controlling the
electric field without any mechanical moving part.
Modeling of microfluidics Devices

Simulation
Models
Statistical
Models
Deterministic
Models
Continuum
Models
Molecular
Models
DSMC LBM
MD
 The continuum model
 Continuum theory in the Navier–Stokes equations only validates when the
mean free path of the molecules is smaller than the characteristic length
scale of the flow field.
 Navier–Stokes equations for microfluidic channel
 Navier–Stokes/Stokes simulation
 Computational fluid dynamics (CFD) based on the continuum Navier–
Stokes equations has been successfully used in fundamental research and
engineering design in different fluid.
 The Navier–Stokes equations
 ρ ( ∂tu + u.▼u) = -▼p + µ▼2u - ρe ▼•Ф ………………………….(1)
 Where u is the flow velocity vector, ρ is the fluid density, µ is the fluid
viscosity, p is the pressure, ρe is the net charge density, and is the electric
potential. E
 ρe is related to the potential by the Poisson equation
ε▼2Ф = ρe ……………….. (2)
 Where ε is the dielectric constant of the fluid medium.
 The charge density can be described by a Boltzmann distribution
ρe=-2 z e no sinh(
𝑧𝑒Ф
𝐾𝑏 𝑇
) ……………………. (3)
 Where z is the valence, e is the charge of an electron, no is the bulk electrolyte
concentration, kb is the Boltzmann constant, and T is the temperature.
 Combining Eqs. (2) and (3) yields the non-linear Poisson–Boltzmann
distribution equation
 ▼2Ф – k2 sinh(Ф)=0 ………………………(4)
 Where k is a constant determined by the ionic composition of the
electrolyte
 These equation are used for linearized the Navier Stocks equation.
 Molecular dynamics simulation (MD)
 Molecular dynamics (MD) method mainly used in nano fluidics because it defined
as an atom or molecules are described as a system of interacting material points,
whose motion is determined dynamically by a vector of instantaneous positions and
velocities.
 The velocities Vi and positions ri of the single atoms evolve according to Newton’s
law of motion
mi
𝜕𝑉𝑖
𝜕𝑡
= 𝑗≠𝑖▼ 𝑉(𝑟ij) ,
𝜕𝑟𝑖
𝜕𝑡
= Vi(t) ……………… (1)
 Where mi is the mass and V (rij) is the interaction potential
 It is inefficient for dilute fluids.
 MD simulations are usually employed for homogeneous system where periodic
boundary conditions are used
 1. Example MD simulations to investigate the wetting behavior of water
droplets confined in carbon nanotubes and found that pure water showed a
nonwetting behavior in nanotubes.
 2. Example MD to study osmotically driven transport of water molecules
through hexagonally packed carbon nanotube membranes and revealed several
distinct features of the nanoflows.
 Direct simulation Monte Carlo (DSMC) method
 DSMC is a direct particle simulation method based on kinetic theory and its
basic idea is to track a large number of statistically representative particles.
 DSMC simulations are not correct at atomic scale, but they are accurate at
scales smaller than mean free path.
 DSMC methods are based on the following Boltzmann equation

𝜕𝑛𝑓
𝑑𝑡 + 𝑐.
𝜕𝑛𝑓
𝜕𝑟
+ 𝐹.
𝜕𝑛𝑓
𝜕𝑐
= ͚
͚
0
4𝜋
𝑛2 (f* f1-f f1)x Cr σ dΩ dc1 ………… (1)
 Where nf is the product of the number density n and the velocity
distribution function f, c is the molecular velocity vector, Cr is the relative
molecular speed, F is an external force, the superscript * denotes post
collision values, f and f1 represent two different kinds of molecules, σ is the
collision cross section, and Ω is the solid angle.
 In the DSMC simulations, the physical flow is into a grid of cells,
structured or unstructured form.
 Lattice-Boltzmann method (LBM)
 Based Kinetic equations and statistical physics
 In LBM, the motion of the fluid is modeled by a lattice Boltzmann equation
for the distribution function of the fluid molecules.
 Boltzmann equation

𝜕𝑓
𝜕𝑡
+ 𝑐.▼ 𝑓 = Ω + F …………….. (1)
 Where f is the single-particle distribution function for particles moving at
velocity c, F is the external force term, and Ω is collision operator representing
the change rate resulting from collisions in f.
 The most commonly used collision operator is the BGK (Bhatnagar–Gross–
Krook) model which uses a single relaxation time approximation
 Ω( f (x,t) ) = -
𝑓 𝑥,𝑡 −𝑓𝑒𝑞(𝑥,𝑡)
τ
… … … … … … … … . 2
 The appropriately chosen equilibrium distribution, denoted by feq, depends on the
local fluid variables, and 1/τ is the rate of approach to this equilibrium.
 External force field (e.g., applied electric field) can be more easily added to the
lattice Boltzmann equation than to the Navier–Stokes equations.
 Example Horbach and Frenkel, 2001, Applied LBM to study electrokinetic
flows in microfluidic devices
 Example of microfluidics Application
 1. Enhanced macromixing using heterogeneous surface
Fig 1. Different surface charge
patterning configuration (Biddiss
et al., 2004).
 It was found that using the
optimized micromixer, mixing
efficiencies were improved between
22% and 68% for electric fields ranging
from 70 to 555 V/cm .
Fig 2. Images of steady-state species transport under
an electric field of280 V/cm for (a) the homogeneous
microchannel and (b) the heterogeneous microchannel
with six offset staggered patches (Biddiss et al., 2004).
 2. Particle/cell separation using
DC-DEP

Fig 3. Separation of 5.7 nm and 15.7 nm particles at 500V
voltage level. Applied voltages at different electrodes: VA=54
V, VB =244 V, VC =502 V, VD=0V; (a) superposed particle
trajectories; (b) comparison of the simulation results and the
 References
 Ajdari, A., 1995. Electro-osmosis on in homogeneously charged surfaces.
Physical Review Letters 75, 755–758. Ajdari, A., 1996.
 Generation of transverse fluid current and forces by an electric field:
electro-osmosis on charge-modulated and undulated surfaces.Physical
Review E 53, 4996–5005.Ajdari, A., 2001.
 Pumping liquids using asymmetric electrode arrays. Physical Review E
61, R45. Ajdari, A., 2002.
 Transverse electrokinetic and microfluidic effects in micropatterned
channels: lubrication analysis for slab geometries. Physical Review E 65,
016301. Alder, B.J., Wainwright, T.E., 1959.
 Studies in molecular dynamics. I. General method. Journal of Chemical
Physics 31, 459–466. Allen, M.P., Tildesley, D.J., 1987.
Literature survey modeling of microfluidics devices

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Literature survey modeling of microfluidics devices

  • 1. Presentation On Modeling of Microfluidics Devices Presented By: Awesh Kumar Singh PhD Scholar
  • 2.  Contents  Some Basic Definition  Classification of Designing/ SIMULATION process 
  • 3.  Electrokinetics in microfluidics  Electroosmosis  Electroosmotic flow is defined as when the solid surfaces of microchannel acquire electrostatic charges when they are in contact with an aqueous solution, The surface charge in turn attracts the counter-ions in the liquid to the region close to the surface, forming the electric double layer (EDL). Under a tangentially applied electric field, the excess counter-ions in the double layer region move to resulting in a bulk liquid motion via viscous effect.  The electroosmotic flow of incompressible liquids can be described by the Navier–Stokes equations.  Electrophoresis  Electrophoresis is defined as when motion of the charged particles relative to surrounding liquid under an applied electric field . When a charged colloidal particle or molecule suspended in an electric field, it will experience a lateral electric force due this force liquid will flow.
  • 4.  Dielectrophoresis  Dielectrophoresis(DEP) is defined as the movement of a neutral but polarizable particle when it is subjected to a non-uniform electric field due to the interaction of the particle's dipole and spatial gradient of the electric field, and produce moment ,due to which liquid will flow.  The electric field can be produced by either a direct current (DC) or alternating current (AC) but non-uniform.  Using DEP, manipulation of particles can be realized by controlling the electric field without any mechanical moving part.
  • 5. Modeling of microfluidics Devices  Simulation Models Statistical Models Deterministic Models Continuum Models Molecular Models DSMC LBM MD
  • 6.  The continuum model  Continuum theory in the Navier–Stokes equations only validates when the mean free path of the molecules is smaller than the characteristic length scale of the flow field.  Navier–Stokes equations for microfluidic channel  Navier–Stokes/Stokes simulation  Computational fluid dynamics (CFD) based on the continuum Navier– Stokes equations has been successfully used in fundamental research and engineering design in different fluid.  The Navier–Stokes equations  ρ ( ∂tu + u.▼u) = -▼p + µ▼2u - ρe ▼•Ф ………………………….(1)
  • 7.  Where u is the flow velocity vector, ρ is the fluid density, µ is the fluid viscosity, p is the pressure, ρe is the net charge density, and is the electric potential. E  ρe is related to the potential by the Poisson equation ε▼2Ф = ρe ……………….. (2)  Where ε is the dielectric constant of the fluid medium.  The charge density can be described by a Boltzmann distribution ρe=-2 z e no sinh( 𝑧𝑒Ф 𝐾𝑏 𝑇 ) ……………………. (3)  Where z is the valence, e is the charge of an electron, no is the bulk electrolyte concentration, kb is the Boltzmann constant, and T is the temperature.
  • 8.  Combining Eqs. (2) and (3) yields the non-linear Poisson–Boltzmann distribution equation  ▼2Ф – k2 sinh(Ф)=0 ………………………(4)  Where k is a constant determined by the ionic composition of the electrolyte  These equation are used for linearized the Navier Stocks equation.
  • 9.  Molecular dynamics simulation (MD)  Molecular dynamics (MD) method mainly used in nano fluidics because it defined as an atom or molecules are described as a system of interacting material points, whose motion is determined dynamically by a vector of instantaneous positions and velocities.  The velocities Vi and positions ri of the single atoms evolve according to Newton’s law of motion mi 𝜕𝑉𝑖 𝜕𝑡 = 𝑗≠𝑖▼ 𝑉(𝑟ij) , 𝜕𝑟𝑖 𝜕𝑡 = Vi(t) ……………… (1)  Where mi is the mass and V (rij) is the interaction potential  It is inefficient for dilute fluids.  MD simulations are usually employed for homogeneous system where periodic boundary conditions are used
  • 10.  1. Example MD simulations to investigate the wetting behavior of water droplets confined in carbon nanotubes and found that pure water showed a nonwetting behavior in nanotubes.  2. Example MD to study osmotically driven transport of water molecules through hexagonally packed carbon nanotube membranes and revealed several distinct features of the nanoflows.  Direct simulation Monte Carlo (DSMC) method  DSMC is a direct particle simulation method based on kinetic theory and its basic idea is to track a large number of statistically representative particles.  DSMC simulations are not correct at atomic scale, but they are accurate at scales smaller than mean free path.
  • 11.  DSMC methods are based on the following Boltzmann equation  𝜕𝑛𝑓 𝑑𝑡 + 𝑐. 𝜕𝑛𝑓 𝜕𝑟 + 𝐹. 𝜕𝑛𝑓 𝜕𝑐 = ͚ ͚ 0 4𝜋 𝑛2 (f* f1-f f1)x Cr σ dΩ dc1 ………… (1)  Where nf is the product of the number density n and the velocity distribution function f, c is the molecular velocity vector, Cr is the relative molecular speed, F is an external force, the superscript * denotes post collision values, f and f1 represent two different kinds of molecules, σ is the collision cross section, and Ω is the solid angle.  In the DSMC simulations, the physical flow is into a grid of cells, structured or unstructured form.
  • 12.  Lattice-Boltzmann method (LBM)  Based Kinetic equations and statistical physics  In LBM, the motion of the fluid is modeled by a lattice Boltzmann equation for the distribution function of the fluid molecules.  Boltzmann equation  𝜕𝑓 𝜕𝑡 + 𝑐.▼ 𝑓 = Ω + F …………….. (1)  Where f is the single-particle distribution function for particles moving at velocity c, F is the external force term, and Ω is collision operator representing the change rate resulting from collisions in f.
  • 13.  The most commonly used collision operator is the BGK (Bhatnagar–Gross– Krook) model which uses a single relaxation time approximation  Ω( f (x,t) ) = - 𝑓 𝑥,𝑡 −𝑓𝑒𝑞(𝑥,𝑡) τ … … … … … … … … . 2  The appropriately chosen equilibrium distribution, denoted by feq, depends on the local fluid variables, and 1/τ is the rate of approach to this equilibrium.  External force field (e.g., applied electric field) can be more easily added to the lattice Boltzmann equation than to the Navier–Stokes equations.  Example Horbach and Frenkel, 2001, Applied LBM to study electrokinetic flows in microfluidic devices
  • 14.  Example of microfluidics Application  1. Enhanced macromixing using heterogeneous surface Fig 1. Different surface charge patterning configuration (Biddiss et al., 2004).
  • 15.  It was found that using the optimized micromixer, mixing efficiencies were improved between 22% and 68% for electric fields ranging from 70 to 555 V/cm . Fig 2. Images of steady-state species transport under an electric field of280 V/cm for (a) the homogeneous microchannel and (b) the heterogeneous microchannel with six offset staggered patches (Biddiss et al., 2004).
  • 16.  2. Particle/cell separation using DC-DEP  Fig 3. Separation of 5.7 nm and 15.7 nm particles at 500V voltage level. Applied voltages at different electrodes: VA=54 V, VB =244 V, VC =502 V, VD=0V; (a) superposed particle trajectories; (b) comparison of the simulation results and the
  • 17.  References  Ajdari, A., 1995. Electro-osmosis on in homogeneously charged surfaces. Physical Review Letters 75, 755–758. Ajdari, A., 1996.  Generation of transverse fluid current and forces by an electric field: electro-osmosis on charge-modulated and undulated surfaces.Physical Review E 53, 4996–5005.Ajdari, A., 2001.  Pumping liquids using asymmetric electrode arrays. Physical Review E 61, R45. Ajdari, A., 2002.  Transverse electrokinetic and microfluidic effects in micropatterned channels: lubrication analysis for slab geometries. Physical Review E 65, 016301. Alder, B.J., Wainwright, T.E., 1959.  Studies in molecular dynamics. I. General method. Journal of Chemical Physics 31, 459–466. Allen, M.P., Tildesley, D.J., 1987.