Revisiting publication at Nature Neuroscience in 2023 by Giordani, B. L. et al. on "Intermediate acoustic-to-semantic representations link behavioral and neural responses to natural sounds"
A monkey model of auditory scene analysisPradeepD32
My work impacts half the world who develop age-related hearing loss with difficulty understanding speech in noise. To understand how the brain solves the cocktail party problem, I need to record from neurons suitable only in animals. Monkeys are best suited for this given our similar auditory brains. I use sounds without semantics and employ fMRI to show that monkeys use similar brain regions as humans to separate overlapping sounds. This study is the first to show such evidence in any animal. Now, I can record from monkey neurons and generalize the results to humans!
Graphical visualization of musical emotionsPranay Prasoon
The document discusses graphical visualization of musical emotions using artificial neural networks. 13 audio features are extracted from Hindustani classical music clips labeled as happy or sad. An ANN model with backpropagation algorithm is trained on 70% of data, validated on 15% and tested on 15%. The model correctly classified 15 of 17 happy clips and 21 of 22 sad clips. Testing was repeated 10 times with over 90% accuracy each time, showing the model effectively recognizes musical emotions. Future work involves expanding the model to recognize additional emotions and incorporating physiological features.
This study investigated differences in brain structural connectivity and the functional default mode network between deaf and hearing individuals using MRI. Results found increased activation in the posterior cingulate cortex, precuneus, and medial temporal lobes in the deaf group's default mode network. Analysis of structural connectivity found differences in node degree and fiber density in these areas and the motor cortex for the deaf group, suggesting neuronal plasticity related to sign language processing. Preliminary results provide new insights into brain network adaptations related to deafness and sign language use.
There are two aspects of dissonance perception: learned/top-down and innate/bottom-up. Sensory dissonance can be modeled using either auditory models based on the auditory periphery or curve-mapping models based on empirical data. Computer programs that simulate sensory dissonance processing can estimate the degree of dissonance for a given sound. The models were tested on piano music, drone music, and synthesized chords by comparing their predictions of dissonance to participant ratings. The curve-mapping models predicted ratings reasonably well for isolated chords and drone music but not piano music, possibly due to non-sensory influences on ratings for more complex music.
Distinguishing Violinists and Pianists Based on Their Brain SignalsGianpaolo Coro
Many studies in neuropsychology have highlighted that expert musicians, who started learning music in childhood, present structural differences in their brains with respect to non-musicians. This indicates that early music learning affects the development of the brain. Also, musicians’ neuronal activity is different depending on the played instrument and on the expertise. This difference can be analysed by processing electroencephalographic (EEG) signals through Artificial Intelligence models. This paper explores the feasibility to build an automatic model that distinguishes violinists from pianists based only on their brain signals. To this aim, EEG signals of violinists and pianists are recorded while they play classical music pieces and an Artificial Neural Network is trained through a cloud computing platform to build a binary classifier of segments of these signals. Our model has the best classification performance on 20 seconds EEG segments, but this performance depends on the involved musicians’ expertise. Also, the brain signals of a cellist are demonstrated to be more similar to violinists’ signals than to pianists’ signals. In summary, this paper demonstrates that distinctive information is present in the two types of musicians’ brain signals, and that this information can be detected even by an automatic model working with a basic EEG equipment.
Abstract of the scientific paper
Coro, G., Masetti, G., Bonhoeffer, P., & Betcher, M. (2019, September). Distinguishing Violinists and Pianists Based on Their Brain Signals. In International Conference on Artificial Neural Networks (pp. 123-137). Springer, Cham.
https://link.springer.com/chapter/10.1007%2F978-3-030-30487-4_11
This document discusses bridging the gap between brain, mind and behavior through cognitive models. It summarizes that analyzing behavior at different levels allows understanding of the underlying mental processes and neural implementation. Taking arithmetic as an example, cognitive models of skills can identify learning problems and related brain structures. Studies of bilinguals show the importance of proficiency over age of language learning for brain organization. Future challenges involve deeper understanding of mental operations from brain imaging data.
A monkey model of auditory scene analysisPradeepD32
My work impacts half the world who develop age-related hearing loss with difficulty understanding speech in noise. To understand how the brain solves the cocktail party problem, I need to record from neurons suitable only in animals. Monkeys are best suited for this given our similar auditory brains. I use sounds without semantics and employ fMRI to show that monkeys use similar brain regions as humans to separate overlapping sounds. This study is the first to show such evidence in any animal. Now, I can record from monkey neurons and generalize the results to humans!
Graphical visualization of musical emotionsPranay Prasoon
The document discusses graphical visualization of musical emotions using artificial neural networks. 13 audio features are extracted from Hindustani classical music clips labeled as happy or sad. An ANN model with backpropagation algorithm is trained on 70% of data, validated on 15% and tested on 15%. The model correctly classified 15 of 17 happy clips and 21 of 22 sad clips. Testing was repeated 10 times with over 90% accuracy each time, showing the model effectively recognizes musical emotions. Future work involves expanding the model to recognize additional emotions and incorporating physiological features.
This study investigated differences in brain structural connectivity and the functional default mode network between deaf and hearing individuals using MRI. Results found increased activation in the posterior cingulate cortex, precuneus, and medial temporal lobes in the deaf group's default mode network. Analysis of structural connectivity found differences in node degree and fiber density in these areas and the motor cortex for the deaf group, suggesting neuronal plasticity related to sign language processing. Preliminary results provide new insights into brain network adaptations related to deafness and sign language use.
There are two aspects of dissonance perception: learned/top-down and innate/bottom-up. Sensory dissonance can be modeled using either auditory models based on the auditory periphery or curve-mapping models based on empirical data. Computer programs that simulate sensory dissonance processing can estimate the degree of dissonance for a given sound. The models were tested on piano music, drone music, and synthesized chords by comparing their predictions of dissonance to participant ratings. The curve-mapping models predicted ratings reasonably well for isolated chords and drone music but not piano music, possibly due to non-sensory influences on ratings for more complex music.
Distinguishing Violinists and Pianists Based on Their Brain SignalsGianpaolo Coro
Many studies in neuropsychology have highlighted that expert musicians, who started learning music in childhood, present structural differences in their brains with respect to non-musicians. This indicates that early music learning affects the development of the brain. Also, musicians’ neuronal activity is different depending on the played instrument and on the expertise. This difference can be analysed by processing electroencephalographic (EEG) signals through Artificial Intelligence models. This paper explores the feasibility to build an automatic model that distinguishes violinists from pianists based only on their brain signals. To this aim, EEG signals of violinists and pianists are recorded while they play classical music pieces and an Artificial Neural Network is trained through a cloud computing platform to build a binary classifier of segments of these signals. Our model has the best classification performance on 20 seconds EEG segments, but this performance depends on the involved musicians’ expertise. Also, the brain signals of a cellist are demonstrated to be more similar to violinists’ signals than to pianists’ signals. In summary, this paper demonstrates that distinctive information is present in the two types of musicians’ brain signals, and that this information can be detected even by an automatic model working with a basic EEG equipment.
Abstract of the scientific paper
Coro, G., Masetti, G., Bonhoeffer, P., & Betcher, M. (2019, September). Distinguishing Violinists and Pianists Based on Their Brain Signals. In International Conference on Artificial Neural Networks (pp. 123-137). Springer, Cham.
https://link.springer.com/chapter/10.1007%2F978-3-030-30487-4_11
This document discusses bridging the gap between brain, mind and behavior through cognitive models. It summarizes that analyzing behavior at different levels allows understanding of the underlying mental processes and neural implementation. Taking arithmetic as an example, cognitive models of skills can identify learning problems and related brain structures. Studies of bilinguals show the importance of proficiency over age of language learning for brain organization. Future challenges involve deeper understanding of mental operations from brain imaging data.
Emotion Detection from Voice Based Classified Frame-Energy Signal Using K-Mea...ijseajournal
Emotion detection is a new research era in health informatics and forensic technology. Besides having some challenges, voice based emotion recognition is getting popular, as the situation where the facial image is not available, the voice is the only way to detect the emotional or psychiatric condition of a
person. However, the voice signal is so dynamic even in a short-time frame so that, a voice of the same person can differ within a very subtle period of time. Therefore, in this research basically two key criterion have been considered; firstly, this is clear that there is a necessity to partition the training data according
to the emotional stage of each individual speaker. Secondly, rather than using the entire voice signal, short time significant frames can be used, which would be enough to identify the emotional condition of the speaker. In this research, Cepstral Coefficient (CC) has been used as voice feature and a fixed valued kmeans clustered method has been used for feature classification. The value of k will depend on the number
of emotional situations in human physiology is being an evaluation. Consequently, the value of k does not necessarily consider the volume of experimental dataset. In this experiment, three emotional conditions: happy, angry and sad have been detected from eight female and seven male voice signals. This methodology has increased the emotion detection accuracy rate significantly comparing to some recent works and also reduced the CPU time of cluster formation and matching.
The document discusses an experiment that analyzed cultural differences in emotion recognition through electroencephalography (EEG) brain scans. Researchers recorded EEG data from Serbian and Chinese participants as they listened to audio clips expressing different emotions. They aimed to determine if language understanding impacts emotion perception and if different nationalities experience emotions differently. Classification analysis found brain signals in response to different emotions were not considerably different, suggesting some commonality in how emotions are experienced.
The document discusses an experiment that analyzed cultural differences in emotion recognition through electroencephalography (EEG) brain scans. Researchers recorded EEG data from Serbian and Chinese participants as they listened to audio clips expressing different emotions. They aimed to determine if language understanding impacts emotion perception and if different nationalities experience emotions differently based on brain activity patterns. Classification accuracy results suggested brain signals in response to different emotions were not considerably different, regardless of nationality.
An introduction to the biology and neurophysiology of human speech. The target audience is researchers and engineers working on speech recognition technology.
1) The auditory evoked N1 response becomes attenuated when sounds are self-generated compared to listening to sounds. This is due to forward models in the motor cortex predicting and cancelling out self-generated sounds.
2) An experiment was conducted using MEG to measure brain activity while participants either listened to sounds, or self-generated sounds with or without cues. Greater attenuation of the N1 response and more motor cortex activity was found for self-initiated sounds.
3) The results provide evidence that intention and motor planning affect auditory processing, with more planning for self-initiated sounds linked to stronger N1 attenuation. This has applications in engineering, neuroscience, and understanding disorders like stuttering
The sophisticated signal processing techniques developed during last years for structural and functional imaging methods allow us to detect abnormalities of brain connectivity in brain disorders with unprecedented detail. Interestingly, recent works shed light on both functional and structural underpinnings of musical anhedonia (i.e., the individual's incapacity to enjoy listening to music). On the other hand, computational models based on brain simulation tools are being used more and more for mapping the functional consequences of structural abnormalities. The latter could help to better understand the mechanism that is impaired in people unable to derive pleasure from music, and formulate hypotheses on how music acquired reward value. The presentation gives an overview of today's studies and proposes a possible simulation pipeline to reproduce such scenario.
This document summarizes research on tone deafness, a disorder characterized by an inability to perceive changes in musical pitch. The key points are:
1. Neuroimaging and patient studies suggest tone deafness involves abnormal pitch processing in secondary auditory cortex and distributed networks beyond the auditory cortex.
2. Research found tone deaf individuals have difficulties perceiving pitch direction and changes in pitch.
3. Studies of brain structure found decreased white matter density and increased cortical thickness in right frontal and auditory areas in tone deaf individuals, suggesting a genetic basis involving abnormal cortical development and connectivity.
1. The study investigated how attentional state and stimulus familiarity influence categorical perception in speech and music sounds. Participants listened to speech and music continua in both active and passive listening conditions.
2. Results showed categorical perception was only evident for speech sounds during active listening, supporting the idea that attention is needed. Reaction times were faster for familiar speech categories compared to ambiguous sounds.
3. Neural activity 100-200ms after sound presentation predicted identification performance for speech only during active listening. The study suggests categorical perception depends on attention and stored auditory knowledge of familiar stimulus categories.
A comparative analysis of classifiers in emotion recognition thru acoustic fea...Pravena Duplex
This document presents a comparative analysis of different classifiers for emotion recognition through acoustic features. It analyzes prosody features like energy and pitch as well as spectral features like MFCCs. Feature fusion, which combines prosody and spectral features, improves classification performance for LDA, RDA, SVM and kNN classifiers by around 20% compared to using features individually. Results on the Berlin and Spanish emotional speech databases show that RDA performs best as it avoids the singularity problem that affects LDA when dimensionality is high relative to the number of training samples.
Individual functional atlasing of the human brain with multitask fMRI data: l...Ana Luísa Pinho
Linking brain systems and mental functions requires accurate descriptions of behavioral tasks and fine demarcations of brain regions. Functional Magnetic Resonance Imaging (fMRI) has opened the possibility to investigate how brain activity is modulated by behavior. However, to date, no data collection has systematically addressed the functional mapping of cognitive mechanisms at a fine spatial scale. Most studies so far are bound to one single task, in which functional responses to a handful of contrasts are analyzed and reported as a group average brain map. The Individual Brain Charting (IBC) project stands for a high-resolution (1.5mm), multi-task fMRI dataset, intended to provide an objective basis for the establishment of a neurocognitive atlas based on the individual mapping of the human brain. This data collection refers to a permanent cohort during performance of a wide variety of tasks across many sessions. Data up to the third release---comprising 28 tasks---are publicly available in the OpenNeuro repository (ds002685). Derived statistical maps from the first and second releases can be found in NeuroVault (id6618) and they amount for 205 canonical contrasts described on the basis of 113 cognitive concepts taken from the Cognitive Atlas. These derivatives reveal all together a comprehensive brain coverage of regions engaged in cognitive processes as well as a successful encoding of the functional networks reported by the original studies. As the dataset becomes larger and the ensuing collection of concepts gets richer, finer subject-specific, cognitive topographies can be extracted from the data. We thus explore this individual-functional-atlasing approach in order to link functional segregation of specialized brain regions to elementary mental functions. Results show that individual topographies---common to all tasks---are consistently mapped within and, to a lesser extent, across participants. Besides, prediction scores associated with the reconstruction of contrasts of one task from the remaining ones reveal the quantitative contribution of each task to these common representations. Yet, scores decreased when subjects were permuted between train and test, confirming that topographies are driven by subject-specific variability. Lastly, we demonstrate how cognitive mapping can benefit from contrasts accumulation, by analyzing the functional fingerprints of a set of individualized regions-of-interest from the language network.
Open science resources for `Big Data' Analyses of the human connectomeCameron Craddock
Neuroimaging has become a `Big Data' pursuit that requires very large datasets and high throughput computational tools. In this talk I will highlight many open science resources for acquiring the necessary data. This is from a lecture that I gave in 2015 at the USC Neuroimaging and Informatics Institute.
TASK-OPTIMIZED DEEP NEURAL NETWORK TO REPLICATE THE HUMAN AUDITORY CORTEXSairam Adithya
this presentation is about a research paper which deals with the development of a deep-learning model to replicate the human auditor system. A lot of interesting facts about the human auditory cortex has been found out through the model. Ultimately, the model is able to replicate the human both task-wise and structure-wise. In other words, appropriate information about the brain was obtained through the model which was performing like the human.
Speech perception is defined as the process by which a perceiver tries to identify the talkers underlying language patterns on the basis of speech sounds and movements. The ultimate goal of speech perception is to determine the meaning and intent behind the spoken message.
-Arthur Boothroyd (1998)
In many everyday situations, we find ourselves listening to speech-often trying to understand the speech of one particular person even as other conversions, radio broadcasts, and public address announcements create a troublesome speech background. How do we understand the speech of other people? How do we select one voice particularly from a crowd of conversing persons? By what processes do we take in the perishable acoustic signal of speech and quickly reach decision about who said it, what was said and how it was said? All of these decisions must be made before the speaker produces the next utterance. These are some of the questions that the study of speech perception attempts to answer.
Auditory perception of speech is a process of interpreting the instructions imprinted on the acoustic wave by the speaker over a time span.
Auditory perception of speech per se deals mainly with the temporal management of information from the input (Berlin 1969).
• Speech is a continuous, unsegmented event. The organs of speech glide from one target position to the next, generating transitional information in the process.
• The characteristics of the acoustic stimulus for any given phoneme are considerably influenced by its neighbors i.e., its phonetic context. Coarticulation results from overlapping of the articulatory constituents of one sound with the next.
The perception of any sound can be considered in terms of either
a) The manner of articulation used in its production
b) The resultant acoustic event.
McKay (1956) described two approaches for an explanation of how linguistic value is determined from a speech signal. They are
1) Active
2) Passive
The passive system is envisaged as a filtered system functioning to identify and combine information so as to restructure the pattern. These theories are termed ‘Non mediated’ theories.
The active models are viewed as comparator systems in which input pattern are compared to an internally generated pattern. These models/theories are referred to as ‘mediated’ theories.
International Journal of Engineering Research and Development (IJERD)IJERD Editor
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Computational neuropharmacology drug designingRevathi Boyina
This document discusses computational neuropharmacology, which uses computational modeling approaches from neuroscience and dynamical systems theory integrated with traditional neuropharmacological methods to study drug effects on the brain and behavior. It describes how computational models are used in neuroscience to simulate neurons, neural circuits, and brain regions. It suggests computational neuropharmacology could help integrate molecular and systems-level descriptions of the nervous system to analyze drug effects on neural activity patterns and behavioral states. This may provide strategies for molecular screening of drugs and searching for target-specific drugs to shift pathological brain dynamics to normal patterns.
Predicting the neural encoding of musical structureSeung-Goo Kim
Presented at a small group seminar (Music and acoustics research group, Graduate School for Convergence Science and Technology, Seoul National University, Suwon, South Korea)
Individual functional atlasing of the human brain with multitask fMRI data: l...Ana Luísa Pinho
Linking brain systems and mental functions requires accurate descriptions of behavioral tasks and fine demarcations of brain regions. Functional Magnetic Resonance Imaging (fMRI) has opened the possibility to investigate how brain activity is modulated by behavior. However, to date, no data collection has systematically addressed the functional mapping of cognitive mechanisms at a fine spatial scale. Most studies so far are bound to one single task, in which functional responses to a handful of contrasts are analyzed and reported as a group average brain map. The Individual Brain Charting (IBC) project stands for a high-resolution (1.5mm), multi-task fMRI dataset, intended to provide an objective basis for the establishment of a neurocognitive atlas based on the individual mapping of the human brain. This data collection refers to a permanent cohort during performance of a wide variety of tasks across many sessions. Data up to the third release---comprising 28 tasks---are publicly available in the OpenNeuro repository (ds002685). Derived statistical maps from the first and second releases can be found in NeuroVault (id6618) and they amount for 205 canonical contrasts described on the basis of 113 cognitive concepts taken from the Cognitive Atlas. These derivatives reveal all together a comprehensive brain coverage of regions engaged in cognitive processes as well as a successful encoding of the functional networks reported by the original studies. As the dataset becomes larger and the ensuing collection of concepts gets richer, finer subject-specific, cognitive topographies can be extracted from the data. We thus explore this individual-functional-atlasing approach in order to link functional segregation of specialized brain regions to elementary mental functions. Results show that individual topographies---common to all tasks---are consistently mapped within and, to a lesser extent, across participants. Besides, prediction scores associated with the reconstruction of contrasts of one task from the remaining ones reveal the quantitative contribution of each task to these common representations. Yet, scores decreased when subjects were permuted between train and test, confirming that topographies are driven by subject-specific variability. Lastly, we demonstrate how cognitive mapping can benefit from contrasts accumulation, by analyzing the functional fingerprints of a set of individualized regions-of-interest from the language network.
The document discusses a study that aimed to reconstruct visual experiences from brain activity evoked by natural movies using fMRI. The study:
1. Recorded brain activity from subjects watching hours of movie trailers to build dictionaries linking shapes, edges and motion to brain activity.
2. Tested the dictionaries by recording brain activity to new movie trailers and selecting the clips most similar to the observed activity.
3. Successfully identified the movie stimulus evoking 95% of observed brain activity, far above chance, demonstrating the ability to decode dynamic visual processing from fMRI.
Constantine Kotropoulos, Associate Professor, Aristotle University of Thessaloniki, Department of Informatics, Sparse and Low Rank Representations in Music Signal Analysis
A Study to Assess the Effectiveness of Planned Teaching Programme on Knowledg...ijtsrd
Suctioning is a common procedure performed by nurses to maintain the gas exchange, adequate oxygenation and alveolar ventilation in critical ill patients under mechanical ventilation and aim of this research is to provide knowledge regarding maintaining airway patency with suctioning care that will help in the implementation of the quality of nursing care, eventually it will lead to better results. The planned study is a pre experimental study to assess the effectiveness of planned teaching programme on knowledge regarding airway patency on patients with mechanical ventilator among the B.Sc. internship students of selected college of nursing at Moradabad. To assess the level of knowledge regarding maintaining airway patency in patients with mechanical ventilator among B.Sc. Nursing internship students. To assess the effectiveness of planned teaching programme in term of knowledge regarding airway patency among B.Sc. nursing internship students. The purpose of this study is to examine the association between knowledge and effectiveness regarding airway patency among B.Sc. Nursing internship demographic students and their selected partner variables. A pre experimental study was conducted among 86 participants, selected by non probability convenient sampling method. Demographic Performa and self structured questionnaire was used to collect the data from the B.Sc. internship students. Nafees Ahmed | Sana Usmani "A Study to Assess the Effectiveness of Planned Teaching Programme on Knowledge Regarding Maintaining Airway Patency in Patients with Mechanical Ventilator" Published in International Journal of Trend in Scientific Research and Development (ijtsrd), ISSN: 2456-6470, Volume-6 | Issue-1 , December 2021, URL: https://www.ijtsrd.com/papers/ijtsrd47917.pdf Paper URL: https://www.ijtsrd.com/medicine/nursing/47917/a-study-to-assess-the-effectiveness-of-planned-teaching-programme-on-knowledge-regarding-maintaining-airway-patency-in-patients-with-mechanical-ventilator/nafees-ahmed
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
How to design stimulus presentation for a task-fMRI experimentAna Luísa Pinho
The document discusses how to design stimulus presentation for a task-fMRI experiment. It explains that the goal is to induce psychological states in the subject and detect related brain signals. There are two main types of experimental designs: blocked designs, where similar events are grouped, and event-related designs, where events are mixed. Key psychological considerations for stimulus design include maintaining stimulus predictability, maximizing time on task, and avoiding unintended psychological activity. The level of predictability influences a subject's psychological state, and short stimuli are recommended to keep subjects engaged in the intended task.
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Emotion detection is a new research era in health informatics and forensic technology. Besides having some challenges, voice based emotion recognition is getting popular, as the situation where the facial image is not available, the voice is the only way to detect the emotional or psychiatric condition of a
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The document discusses an experiment that analyzed cultural differences in emotion recognition through electroencephalography (EEG) brain scans. Researchers recorded EEG data from Serbian and Chinese participants as they listened to audio clips expressing different emotions. They aimed to determine if language understanding impacts emotion perception and if different nationalities experience emotions differently. Classification analysis found brain signals in response to different emotions were not considerably different, suggesting some commonality in how emotions are experienced.
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An introduction to the biology and neurophysiology of human speech. The target audience is researchers and engineers working on speech recognition technology.
1) The auditory evoked N1 response becomes attenuated when sounds are self-generated compared to listening to sounds. This is due to forward models in the motor cortex predicting and cancelling out self-generated sounds.
2) An experiment was conducted using MEG to measure brain activity while participants either listened to sounds, or self-generated sounds with or without cues. Greater attenuation of the N1 response and more motor cortex activity was found for self-initiated sounds.
3) The results provide evidence that intention and motor planning affect auditory processing, with more planning for self-initiated sounds linked to stronger N1 attenuation. This has applications in engineering, neuroscience, and understanding disorders like stuttering
The sophisticated signal processing techniques developed during last years for structural and functional imaging methods allow us to detect abnormalities of brain connectivity in brain disorders with unprecedented detail. Interestingly, recent works shed light on both functional and structural underpinnings of musical anhedonia (i.e., the individual's incapacity to enjoy listening to music). On the other hand, computational models based on brain simulation tools are being used more and more for mapping the functional consequences of structural abnormalities. The latter could help to better understand the mechanism that is impaired in people unable to derive pleasure from music, and formulate hypotheses on how music acquired reward value. The presentation gives an overview of today's studies and proposes a possible simulation pipeline to reproduce such scenario.
This document summarizes research on tone deafness, a disorder characterized by an inability to perceive changes in musical pitch. The key points are:
1. Neuroimaging and patient studies suggest tone deafness involves abnormal pitch processing in secondary auditory cortex and distributed networks beyond the auditory cortex.
2. Research found tone deaf individuals have difficulties perceiving pitch direction and changes in pitch.
3. Studies of brain structure found decreased white matter density and increased cortical thickness in right frontal and auditory areas in tone deaf individuals, suggesting a genetic basis involving abnormal cortical development and connectivity.
1. The study investigated how attentional state and stimulus familiarity influence categorical perception in speech and music sounds. Participants listened to speech and music continua in both active and passive listening conditions.
2. Results showed categorical perception was only evident for speech sounds during active listening, supporting the idea that attention is needed. Reaction times were faster for familiar speech categories compared to ambiguous sounds.
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A comparative analysis of classifiers in emotion recognition thru acoustic fea...Pravena Duplex
This document presents a comparative analysis of different classifiers for emotion recognition through acoustic features. It analyzes prosody features like energy and pitch as well as spectral features like MFCCs. Feature fusion, which combines prosody and spectral features, improves classification performance for LDA, RDA, SVM and kNN classifiers by around 20% compared to using features individually. Results on the Berlin and Spanish emotional speech databases show that RDA performs best as it avoids the singularity problem that affects LDA when dimensionality is high relative to the number of training samples.
Individual functional atlasing of the human brain with multitask fMRI data: l...Ana Luísa Pinho
Linking brain systems and mental functions requires accurate descriptions of behavioral tasks and fine demarcations of brain regions. Functional Magnetic Resonance Imaging (fMRI) has opened the possibility to investigate how brain activity is modulated by behavior. However, to date, no data collection has systematically addressed the functional mapping of cognitive mechanisms at a fine spatial scale. Most studies so far are bound to one single task, in which functional responses to a handful of contrasts are analyzed and reported as a group average brain map. The Individual Brain Charting (IBC) project stands for a high-resolution (1.5mm), multi-task fMRI dataset, intended to provide an objective basis for the establishment of a neurocognitive atlas based on the individual mapping of the human brain. This data collection refers to a permanent cohort during performance of a wide variety of tasks across many sessions. Data up to the third release---comprising 28 tasks---are publicly available in the OpenNeuro repository (ds002685). Derived statistical maps from the first and second releases can be found in NeuroVault (id6618) and they amount for 205 canonical contrasts described on the basis of 113 cognitive concepts taken from the Cognitive Atlas. These derivatives reveal all together a comprehensive brain coverage of regions engaged in cognitive processes as well as a successful encoding of the functional networks reported by the original studies. As the dataset becomes larger and the ensuing collection of concepts gets richer, finer subject-specific, cognitive topographies can be extracted from the data. We thus explore this individual-functional-atlasing approach in order to link functional segregation of specialized brain regions to elementary mental functions. Results show that individual topographies---common to all tasks---are consistently mapped within and, to a lesser extent, across participants. Besides, prediction scores associated with the reconstruction of contrasts of one task from the remaining ones reveal the quantitative contribution of each task to these common representations. Yet, scores decreased when subjects were permuted between train and test, confirming that topographies are driven by subject-specific variability. Lastly, we demonstrate how cognitive mapping can benefit from contrasts accumulation, by analyzing the functional fingerprints of a set of individualized regions-of-interest from the language network.
Open science resources for `Big Data' Analyses of the human connectomeCameron Craddock
Neuroimaging has become a `Big Data' pursuit that requires very large datasets and high throughput computational tools. In this talk I will highlight many open science resources for acquiring the necessary data. This is from a lecture that I gave in 2015 at the USC Neuroimaging and Informatics Institute.
TASK-OPTIMIZED DEEP NEURAL NETWORK TO REPLICATE THE HUMAN AUDITORY CORTEXSairam Adithya
this presentation is about a research paper which deals with the development of a deep-learning model to replicate the human auditor system. A lot of interesting facts about the human auditory cortex has been found out through the model. Ultimately, the model is able to replicate the human both task-wise and structure-wise. In other words, appropriate information about the brain was obtained through the model which was performing like the human.
Speech perception is defined as the process by which a perceiver tries to identify the talkers underlying language patterns on the basis of speech sounds and movements. The ultimate goal of speech perception is to determine the meaning and intent behind the spoken message.
-Arthur Boothroyd (1998)
In many everyday situations, we find ourselves listening to speech-often trying to understand the speech of one particular person even as other conversions, radio broadcasts, and public address announcements create a troublesome speech background. How do we understand the speech of other people? How do we select one voice particularly from a crowd of conversing persons? By what processes do we take in the perishable acoustic signal of speech and quickly reach decision about who said it, what was said and how it was said? All of these decisions must be made before the speaker produces the next utterance. These are some of the questions that the study of speech perception attempts to answer.
Auditory perception of speech is a process of interpreting the instructions imprinted on the acoustic wave by the speaker over a time span.
Auditory perception of speech per se deals mainly with the temporal management of information from the input (Berlin 1969).
• Speech is a continuous, unsegmented event. The organs of speech glide from one target position to the next, generating transitional information in the process.
• The characteristics of the acoustic stimulus for any given phoneme are considerably influenced by its neighbors i.e., its phonetic context. Coarticulation results from overlapping of the articulatory constituents of one sound with the next.
The perception of any sound can be considered in terms of either
a) The manner of articulation used in its production
b) The resultant acoustic event.
McKay (1956) described two approaches for an explanation of how linguistic value is determined from a speech signal. They are
1) Active
2) Passive
The passive system is envisaged as a filtered system functioning to identify and combine information so as to restructure the pattern. These theories are termed ‘Non mediated’ theories.
The active models are viewed as comparator systems in which input pattern are compared to an internally generated pattern. These models/theories are referred to as ‘mediated’ theories.
International Journal of Engineering Research and Development (IJERD)IJERD Editor
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Computational neuropharmacology drug designingRevathi Boyina
This document discusses computational neuropharmacology, which uses computational modeling approaches from neuroscience and dynamical systems theory integrated with traditional neuropharmacological methods to study drug effects on the brain and behavior. It describes how computational models are used in neuroscience to simulate neurons, neural circuits, and brain regions. It suggests computational neuropharmacology could help integrate molecular and systems-level descriptions of the nervous system to analyze drug effects on neural activity patterns and behavioral states. This may provide strategies for molecular screening of drugs and searching for target-specific drugs to shift pathological brain dynamics to normal patterns.
Predicting the neural encoding of musical structureSeung-Goo Kim
Presented at a small group seminar (Music and acoustics research group, Graduate School for Convergence Science and Technology, Seoul National University, Suwon, South Korea)
Individual functional atlasing of the human brain with multitask fMRI data: l...Ana Luísa Pinho
Linking brain systems and mental functions requires accurate descriptions of behavioral tasks and fine demarcations of brain regions. Functional Magnetic Resonance Imaging (fMRI) has opened the possibility to investigate how brain activity is modulated by behavior. However, to date, no data collection has systematically addressed the functional mapping of cognitive mechanisms at a fine spatial scale. Most studies so far are bound to one single task, in which functional responses to a handful of contrasts are analyzed and reported as a group average brain map. The Individual Brain Charting (IBC) project stands for a high-resolution (1.5mm), multi-task fMRI dataset, intended to provide an objective basis for the establishment of a neurocognitive atlas based on the individual mapping of the human brain. This data collection refers to a permanent cohort during performance of a wide variety of tasks across many sessions. Data up to the third release---comprising 28 tasks---are publicly available in the OpenNeuro repository (ds002685). Derived statistical maps from the first and second releases can be found in NeuroVault (id6618) and they amount for 205 canonical contrasts described on the basis of 113 cognitive concepts taken from the Cognitive Atlas. These derivatives reveal all together a comprehensive brain coverage of regions engaged in cognitive processes as well as a successful encoding of the functional networks reported by the original studies. As the dataset becomes larger and the ensuing collection of concepts gets richer, finer subject-specific, cognitive topographies can be extracted from the data. We thus explore this individual-functional-atlasing approach in order to link functional segregation of specialized brain regions to elementary mental functions. Results show that individual topographies---common to all tasks---are consistently mapped within and, to a lesser extent, across participants. Besides, prediction scores associated with the reconstruction of contrasts of one task from the remaining ones reveal the quantitative contribution of each task to these common representations. Yet, scores decreased when subjects were permuted between train and test, confirming that topographies are driven by subject-specific variability. Lastly, we demonstrate how cognitive mapping can benefit from contrasts accumulation, by analyzing the functional fingerprints of a set of individualized regions-of-interest from the language network.
The document discusses a study that aimed to reconstruct visual experiences from brain activity evoked by natural movies using fMRI. The study:
1. Recorded brain activity from subjects watching hours of movie trailers to build dictionaries linking shapes, edges and motion to brain activity.
2. Tested the dictionaries by recording brain activity to new movie trailers and selecting the clips most similar to the observed activity.
3. Successfully identified the movie stimulus evoking 95% of observed brain activity, far above chance, demonstrating the ability to decode dynamic visual processing from fMRI.
Constantine Kotropoulos, Associate Professor, Aristotle University of Thessaloniki, Department of Informatics, Sparse and Low Rank Representations in Music Signal Analysis
A Study to Assess the Effectiveness of Planned Teaching Programme on Knowledg...ijtsrd
Suctioning is a common procedure performed by nurses to maintain the gas exchange, adequate oxygenation and alveolar ventilation in critical ill patients under mechanical ventilation and aim of this research is to provide knowledge regarding maintaining airway patency with suctioning care that will help in the implementation of the quality of nursing care, eventually it will lead to better results. The planned study is a pre experimental study to assess the effectiveness of planned teaching programme on knowledge regarding airway patency on patients with mechanical ventilator among the B.Sc. internship students of selected college of nursing at Moradabad. To assess the level of knowledge regarding maintaining airway patency in patients with mechanical ventilator among B.Sc. Nursing internship students. To assess the effectiveness of planned teaching programme in term of knowledge regarding airway patency among B.Sc. nursing internship students. The purpose of this study is to examine the association between knowledge and effectiveness regarding airway patency among B.Sc. Nursing internship demographic students and their selected partner variables. A pre experimental study was conducted among 86 participants, selected by non probability convenient sampling method. Demographic Performa and self structured questionnaire was used to collect the data from the B.Sc. internship students. Nafees Ahmed | Sana Usmani "A Study to Assess the Effectiveness of Planned Teaching Programme on Knowledge Regarding Maintaining Airway Patency in Patients with Mechanical Ventilator" Published in International Journal of Trend in Scientific Research and Development (ijtsrd), ISSN: 2456-6470, Volume-6 | Issue-1 , December 2021, URL: https://www.ijtsrd.com/papers/ijtsrd47917.pdf Paper URL: https://www.ijtsrd.com/medicine/nursing/47917/a-study-to-assess-the-effectiveness-of-planned-teaching-programme-on-knowledge-regarding-maintaining-airway-patency-in-patients-with-mechanical-ventilator/nafees-ahmed
Similar to Journal Club - "Intermediate acoustic-to-semantic representations link behavioral and neural responses to natural sounds" (20)
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
How to design stimulus presentation for a task-fMRI experimentAna Luísa Pinho
The document discusses how to design stimulus presentation for a task-fMRI experiment. It explains that the goal is to induce psychological states in the subject and detect related brain signals. There are two main types of experimental designs: blocked designs, where similar events are grouped, and event-related designs, where events are mixed. Key psychological considerations for stimulus design include maintaining stimulus predictability, maximizing time on task, and avoiding unintended psychological activity. The level of predictability influences a subject's psychological state, and short stimuli are recommended to keep subjects engaged in the intended task.
How to conduct and fMRI experiment in cognitive neuroscienceAna Luísa Pinho
This document outlines the steps to conduct an fMRI experiment in cognitive neuroscience. It discusses prescreening participants and obtaining consent during recruitment. It describes the MRI scanner setup, including the control room and placing participants inside the scanner. The key steps of an experiment are running a localizer scan, anatomical scan, setting the field of view, and running the functional EPI sequence. Resources provided include Western's ethics guidelines and a textbook on fMRI.
Deep behavioral phenotyping in functional MRI for cognitive mapping of the hu...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required, by pooling data or results from different single-task studies. Meta-analyses allow the accumulation of knowledge across studies. Yet, they are typically impacted not only by inter-subject and inter-site variability but also loss of information from sparse peak-coordinate representations. In this talk, I will address a battery of studies, which combine deep phenotyping and multitask-fMRI approaches to extensively investigate the functional signatures of the different components that characterize the human behavior. First, I will describe a set of experiments, based on temporally controlled task designs, reported in [1], [2] and [3], in which we leverage a collection of source task-fMRI data from the Individual Brain Charting (IBC) dataset. The main goal herein is to investigate the feasibility of performing individual functional brain atlasing, free from inter-subject and inter-site variability, as an effort to establish an univocal relationship between functional segregation of brain regions and elementary mental functions. Results show that individual topographies---common to all tasks---are consistently mapped within and, to a lesser extent, across participants. Besides, prediction scores associated with the reconstruction of contrasts of one task from the remaining ones reveal the quantitative contribution of each task to these common representations. Yet, scores decreased when subjects were permuted between train and test, confirming that topographies are driven by subject-specific variability. In addition, we demonstrate how cognitive mapping can benefit from contrasts accumulation, by analyzing the functional fingerprints of a set of individualized regions-of-interest from the language network. Second, I will describe our ongoing work on the quality-assessment and validation of a subset of tasks from the IBC dataset based on naturalistic stimuli using two types of encoding models: the unsupervised Fast Shared Response Model [4], and a feature-defined model based on Deep Convolutional Neural Networks [5, 6].
[1] Pinho, A.L. et al. (2021) DOI: 10.1002/hbm.25189
[2] Pinho, A.L. et al. (2018) DOI: 10.1038/sdata.2018.105
[3] Pinho, A.L. et al. (2020) DOI: 10.1038/s41597-020-00670-4
[4] Richard, H. et al. (2019) DOI: 10.48550/arXiv.1909.12537
[5] Eickenberg, M. et al. (2016) DOI: 10.1016/j.neuroimage.2016.10.001
[6] Güçlü, U. and van Gerven, M. A. J. (2015) DOI: 10.1523/JNEUROSCI.5023-14.2015
Deep behavioral phenotyping in functional MRI for cognitive mapping of the hu...Ana Luísa Pinho
The document summarizes a seminar given by Ana Luisa Pinho on her work analyzing the Individual Brain Charting (IBC) dataset. The IBC dataset consists of high-resolution fMRI scans of 12 healthy adults performing a variety of cognitive tasks. Pinho discussed assessing the quality of data in the IBC First Release, functional mapping of individual brains using the dataset, and encoding analysis of natural stimuli using the Fast Shared Response Model on the IBC Third Release. The goal is to leverage the large, high-quality IBC dataset to better map the relationship between brain systems and mental functions.
Music SDTB: Probing the Neurocognitive Mechanisms of Temporal PredictionsAna Luísa Pinho
This document outlines a study called the Music Single-Domain Task Battery (Music-SDTB) that aims to investigate the neurocognitive mechanisms underlying temporal predictions. The study will test 25 participants using 6 tasks that manipulate timing and sensory domains to probe the contributions of the basal ganglia and cerebellum in forming temporal predictions in rhythmic and non-rhythmic sequences. Key hypotheses are that the basal ganglia contributes more to rhythmic timing judgments while the cerebellum contributes more to single interval timing judgments. Results will provide insights into the role of different brain regions and sensory modalities in temporal prediction.
Revisiting publication at Nature Neuroscience in 2009 by Kriegeskorte, N. et al. on "Circular analysis in systems neuroscience: the dangers of double dipping"
Deep behavioral phenotyping in functional MRI for cognitive mapping of the hu...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required, by pooling data or results from different single-task studies. Meta-analyses allow the accumulation of knowledge across studies. Yet, they are typically impacted not only by inter-subject and inter-site variability but also loss of information from sparse peak-coordinate representations. In this talk, I will address a battery of studies, which combine deep phenotyping and multitask-fMRI approaches to extensively investigate the functional signatures of the different components that characterize the human behavior. First, I will describe a set of experiments, based on temporally controlled task designs, reported in [1], [2] and [3], in which we leverage a collection of source task-fMRI data from the Individual Brain Charting (IBC) dataset. The main goal herein is to investigate the feasibility of performing individual functional brain atlasing, free from inter-subject and inter-site variability, as an effort to establish an univocal relationship between functional segregation of brain regions and elementary mental functions. Results show that individual topographies---common to all tasks---are consistently mapped within and, to a lesser extent, across participants. Besides, prediction scores associated with the reconstruction of contrasts of one task from the remaining ones reveal the quantitative contribution of each task to these common representations. Yet, scores decreased when subjects were permuted between train and test, confirming that topographies are driven by subject-specific variability. In addition, we demonstrate how cognitive mapping can benefit from contrasts accumulation, by analyzing the functional fingerprints of a set of individualized regions-of-interest from the language network. Second, I will describe our ongoing work on the quality-assessment and validation of a subset of tasks from IBC dataset based on naturalistic stimuli using a Fast Shared Response Model encoding experiment [4]. I will finish this presentation with some insights about the application of the aforementioned functional-atlasing techniques to probe region-specific topographies linked to a particular neurocognitive mechanism of interest.
[1] Pinho, A.L. et al. (2021) DOI: 10.1002/hbm.25189
[2] Pinho, A.L. et al. (2018) DOI: 10.1038/sdata.2018.105
[3] Pinho, A.L. et al. (2020) DOI: 10.1038/s41597-020-00670-4
[4] Richard, H. et al. (2019) DOI: 10.48550/arXiv.1909.12537
Single-Domain Task Battery (SDTB) on Temporal PredictionAna Luísa Pinho
This document summarizes a single-domain task battery (SDTB) study on temporal prediction using fMRI. The study aims to assess whether temporal predictions are mediated by context-specific or common neurocognitive mechanisms. It outlines three models of temporal prediction and references a behavioral study that found a double dissociation between rhythmic and single-interval predictions, implicating separate roles of the cerebellum and basal ganglia. The SDTB study will use different tasks manipulating timing and sensory domains to investigate the neural correlates associated with these sub-cortical contributions and their relationship to cortex. Participants will complete production and perception tasks with auditory and visual stimuli in beat and interval conditions.
This document summarizes a meeting that discussed analyzing naturalistic fMRI data using the Fast Shared Response Model (FastSRM). It described the Individual Brain Charting dataset, analyzing clips and raiders tasks with FastSRM, evaluating reproducibility through cross-validation, and finding consistent retinotopic maps and semantic space across subjects. The document concluded that FastSRM is a computationally efficient method for analyzing naturalistic fMRI data.
Individual functional atlasing of the human brain with multitask fMRI data: l...Ana Luísa Pinho
Linking brain systems and mental functions requires accurate descriptions of behavioral tasks and fine demarcations of brain regions. Functional Magnetic Resonance Imaging (fMRI) has opened the possibility to investigate how brain activity is modulated by behavior. However, to date, no data collection has systematically addressed the functional mapping of cognitive mechanisms at a fine spatial scale. Most studies so far are bound to one single task, in which functional responses to a handful of contrasts are analyzed and reported as a group average brain map. The Individual Brain Charting (IBC) project stands for a high-resolution (1.5mm), multi-task fMRI dataset, intended to provide an objective basis for the establishment of a neurocognitive atlas based on the individual mapping of the human brain. This data collection refers to a permanent cohort during performance of a wide variety of tasks across many sessions. Data up to the third release---comprising 28 tasks---are publicly available in the OpenNeuro repository (ds002685). Derived statistical maps from the first and second releases can be found in NeuroVault (id6618) and they amount for 205 canonical contrasts described on the basis of 113 cognitive concepts taken from the Cognitive Atlas. These derivatives reveal all together a comprehensive brain coverage of regions engaged in cognitive processes as well as a successful encoding of the functional networks reported by the original studies. As the dataset becomes larger and the ensuing collection of concepts gets richer, finer subject-specific, cognitive topographies can be extracted from the data. We thus explore this individual-functional-atlasing approach in order to link functional segregation of specialized brain regions to elementary mental functions. Results show that individual topographies---common to all tasks---are consistently mapped within and, to a lesser extent, across participants. Besides, prediction scores associated with the reconstruction of contrasts of one task from the remaining ones reveal the quantitative contribution of each task to these common representations. Yet, scores decreased when subjects were permuted between train and test, confirming that topographies are driven by subject-specific variability. Lastly, we demonstrate how cognitive mapping can benefit from contrasts accumulation, by analyzing the functional fingerprints of a set of individualized regions-of-interest from the language network.
Individual functional atlasing of the human brain with multitask fMRI data: l...Ana Luísa Pinho
Linking brain systems and mental functions requires accurate descriptions of behavioral tasks and fine demarcations of brain regions. Functional Magnetic Resonance Imaging (fMRI) has opened the possibility to investigate how brain activity is modulated by behavior. However, to date, no data collection has systematically addressed the functional mapping of cognitive mechanisms at a fine spatial scale. Most studies so far are bound to one single task, in which functional responses to a handful of contrasts are analyzed and reported as a group average brain map. The Individual Brain Charting (IBC) project stands for a high-resolution (1.5mm), multi-task fMRI dataset, intended to provide an objective basis for the establishment of a neurocognitive atlas based on the individual mapping of the human brain. This data collection refers to a permanent cohort during performance of a wide variety of tasks across many sessions. Data up to the third release---comprising 28 tasks---are publicly available in the OpenNeuro repository (ds002685). Derived statistical maps from the first and second releases can be found in NeuroVault (id6618) and they amount for 205 canonical contrasts described on the basis of 113 cognitive concepts taken from the Cognitive Atlas. These derivatives reveal all together a comprehensive brain coverage of regions engaged in cognitive processes as well as a successful encoding of the functional networks reported by the original studies. As the dataset becomes larger and the ensuing collection of concepts gets richer, finer subject-specific, cognitive topographies can be extracted from the data. We thus explore this individual-functional-atlasing approach in order to link functional segregation of specialized brain regions to elementary mental functions. Results show that individual topographies---common to all tasks---are consistently mapped within and, to a lesser extent, across participants. Besides, prediction scores associated with the reconstruction of contrasts of one task from the remaining ones reveal the quantitative contribution of each task to these common representations. Yet, scores decreased when subjects were permuted between train and test, confirming that topographies are driven by subject-specific variability. Lastly, we demonstrate how cognitive mapping can benefit from contrasts accumulation, by analyzing the functional fingerprints of a set of individualized regions-of-interest from the language network.
Segregation of functional territories in individual brainsAna Luísa Pinho
Aims
FMRI allows for characterization of brain activations in response to behavior. However, cognitive neuroscience is limited to group-level effects on specific tasks. Pooling data from different task-fMRI studies free from inter-subject and inter-site variability is mandatory toward a fine functional profile of cognitive atoms. We present the Individual Brain Charting dataset --concerning fMRI data acquired at high resolution (1.5mm) in the same environment and cohort-- and investigate the feasibility of individual functional atlasing using a rich taskwise dataset.
Methods
Individual z-maps from the 60 main contrasts across tasks were estimated to capture significant functional signatures. These derivatives were analyzed as in Pinho et al. (2018). Besides, contrasts were decomposed using dictionary-learning into individual networks featuring neural correlates common to the tasks. To gain insights about these commonalities, we also reconstructed contrasts from the remaining ones in a cross-validation experiment. Additionally, we delineated the cognitive profile of 6 regions-of-interest and assessed whether voxels were correctly assigned to these regions across participants.
Results
Individual components were consistently mapped and tasks were well predicted from one another. Yet, scores decreased when subjects were permuted between train and test, showing that topographies are driven by subject-specific anatomo-functional characteristics. Additionally, characterization of regions-of-interest from many contrasts objectively establishes functional specialization, supported by prediction accuracies of voxel classification.
Conclusions
Successful predictions revealed the existence of a latent structure underlying different tasks, illustrating the benefit of system-level, multi-task brain mapping. Contrasts and, subsequently, individual topographies are increasing with the latest releases, allowing for better brain-atlasing frameworks.
Individual Brain Charting, a high-resolution fMRI dataset for cognitive mappi...Ana Luísa Pinho
Linking brain systems and mental functions requires accurate descriptions of behavioral tasks and fine demarcations of brain regions. To date, no data collection has systematically addressed the functional mapping of cognitive mechanisms at a fine spatial scale. The Individual Brain Charting (IBC) dataset stands for a high-resolution multi-task fMRI dataset that intends to provide a framework toward a comprehensive functional atlas of the human brain. The data refer to a permanent cohort (12 participants) performing many different tasks, free from both inter-subject and inter-site variability. The first release of the IBC dataset is already out and publicly available in the OpenNeuro (ds000244) and NeuroVault (id=4438). These maps reveal a successful cognitive encoding of many psychological domains in large areas of the human brain, as the main findings of the original studies were reproduced at a high resolution. They thus provide a comprehensive revision of the neural correlates underlying behavior, highlighting nonetheless the spatial variability of functional signatures between participants. Additionally, this dataset supports the investigation of mega-analytic encoding models to be implemented in a brain-atlasing infrastructure, by systematically mapping functional signatures associated with the cognitive components of the tasks.
Individual Brain Charting, a high-resolution fMRI dataset for cognitive mappi...Ana Luísa Pinho
Linking brain systems and mental functions requires accurate descriptions of behavioral tasks and fine demarcations of brain regions. Functional Magnetic Resonance Imaging (fMRI) has contributed to the investigation of brain regions involved in a variety of cognitive processes. However, to date, no data collection has systematically addressed the functional mapping of cognitive mechanisms at a fine spatial scale. The Individual Brain Charting (IBC) project stands for a high-resolution multi-task fMRI dataset that intends to provide the objective basis toward a comprehensive functional atlas of the human brain. The data refer to a permanent cohort performing many different tasks. The large amount of task-fMRI data on the same subjects yields a precise mapping of the underlying functions, free from both inter-subject and inter-site variability. The first release of the IBC dataset consists of data acquired from thirteen participants during performance of a dozen of tasks. Raw data from this release are publicly available in the OpenNeuro repository and derived statistical maps can be found in NeuroVault [1]. These maps reveal a successful cognitive encoding of many psychological domains in large areas of the human brain. Indeed, main findings of the original studies were replicated at higher resolution. Our results thus provide a comprehensive revision of the neural correlates underlying behavior, highlighting nonetheless the spatial variability of functional signatures between participants. In addition, this dataset supports investigations using alternative approaches to group-level analysis of task-specific studies. For instance, such rich task-wise dataset can be applied to mega-analytic encoding models towards the development of a brain-atlasing framework, by systematically mapping functional signatures associated with the cognitive components of the tasks.
Functional specialization in human cognition: a large-scale neuroimaging init...Ana Luísa Pinho
Linking brain systems and mental functions requires accurate descriptions of behavioral tasks and fine demarcations of brain regions. Functional Magnetic Resonance Imaging (fMRI) has contributed to the investigation of brain regions involved in a variety of cognitive processes. However, to date, no data collection has systematically addressed the functional mapping of cognitive mechanisms at a fine spatial scale. The Individual Brain Charting (IBC) project stands for a high-resolution multi-task fMRI dataset that intends to provide the objective basis toward a comprehensive functional atlas of the human brain. The data refer to a permanent cohort performing many different tasks. The large amount of task-fMRI data on the same subjects yields a precise mapping of the underlying functions, free from both inter-subject and inter-site variability. The first release of the IBC dataset consists of data acquired from thirteen participants during performance of a dozen of tasks. Raw data from this release are publicly available in the OpenNeuro repository and derived statistical maps can be found in NeuroVault. These maps reveal a successful cognitive encoding of many psychological domains in large areas of the human brain. Indeed, main findings of the original studies were replicated at higher resolution. Our results thus provide a comprehensive revision of the neural correlates underlying behavior, highlighting nonetheless the spatial variability of functional signatures between participants. In addition, this dataset supports investigations using alternative approaches to group-level analysis of task-specific studies. For instance, such rich task-wise dataset can be applied to mega-analytic encoding models towards the development of a brain-atlasing framework, by systematically mapping functional signatures associated with the cognitive components of the tasks.
Functional specialization in human cognition: a large-scale neuroimaging init...Ana Luísa Pinho
Linking brain systems and mental functions requires accurate descriptions of behavioral tasks and fine demarcations of brain regions. Functional Magnetic Resonance Imaging (fMRI) has contributed to the investigation of brain regions involved in a variety of cognitive processes. However, to date, no data collection has systematically addressed the functional mapping of cognitive mechanisms at a fine spatial scale. The Individual Brain Charting (IBC) project stands for a high-resolution multi-task fMRI dataset that intends to provide the objective basis toward a comprehensive functional atlas of the human brain. The data refer to a permanent cohort performing many different tasks. The large amount of task-fMRI data on the same subjects yields a precise mapping of the underlying functions, free from both inter-subject and inter-site variability. The first release of the IBC dataset consists of data acquired from thirteen participants during performance of a dozen of tasks. Raw data from this release are publicly available in the OpenNeuro repository and derived statistical maps can be found in NeuroVault [1]. These maps reveal a successful cognitive encoding of many psychological domains in large areas of the human brain. Indeed, main findings of the original studies were replicated at higher resolution. Our results thus provide a comprehensive revision of the neural correlates underlying behavior, highlighting nonetheless the spatial variability of functional signatures between participants. In addition, this dataset supports investigations using alternative approaches to group-level analysis of task-specific studies. For instance, such rich task-wise dataset can be applied to mega-analytic encoding models towards the development of a brain-atlasing framework, by systematically mapping functional signatures associated with the cognitive components of the tasks.
Individual Brain Charting, a high-resolution fMRI dataset for cognitive mappi...Ana Luísa Pinho
Linking brain systems and mental functions requires accurate descriptions of behavioral tasks and fine demarcations of brain regions. Functional Magnetic Resonance Imaging (fMRI) has contributed to the investigation of brain regions involved in a variety of cognitive processes. However, to date, no data collection has systematically addressed the functional mapping of cognitive mechanisms at a fine spatial scale. The Individual Brain Charting (IBC) project stands for a high-resolution multi-task fMRI dataset that intends to provide the objective basis toward a comprehensive functional atlas of the human brain. The data refer to a permanent cohort performing many different tasks. The large amount of task-fMRI data on the same subjects yields a precise mapping of the underlying functions, free from both inter-subject and inter-site variability. The first release of the IBC dataset consists of data acquired from thirteen participants during performance of a dozen of tasks. Raw data from this release are publicly available in the OpenNeuro repository and derived statistical maps can be found in NeuroVault. These maps reveal a successful cognitive encoding of many psychological domains in large areas of the human brain. Indeed, main findings of the original studies were replicated at higher resolution. Our results thus provide a comprehensive revision of the neural correlates underlying behavior, highlighting nonetheless the spatial variability of functional signatures between participants. In addition, this dataset supports investigations using alternative approaches to group-level analysis of task-specific studies. For instance, such rich task-wise dataset can be applied to mega-analytic encoding models towards the development of a brain-atlasing framework, by systematically mapping functional signatures associated with the cognitive components of the tasks.
Individual Brain Charting, a high-resolution fMRI dataset for cognitive mappi...Ana Luísa Pinho
Mapping functional neuroanatomy of the human brain has become a central challenge in cognitive neuroscience and it constitutes an essential step toward linking brain systems and behavior. While there is a rich literature on the neural correlates underlying performance of standardized tasks, little is still known about the overall functional organization of the brain and how it can be translated into cognition. Neuroimaging techniques, such as Functional Magnetic Resonance Imaging (fMRI) have contributed to the investigation of brain regions involved in a variety of cognitive processes. However, to date, no data collection has systematically addressed the functional mapping of cognitive mechanisms within a broader scope. The Individual Brain Charting (IBC) project stands for a multi-task fMRI dataset, to be shared with the neuroimaging community, featuring an univocal encoding between task descriptors and brain imaging data. It is intended to support the investigation of the functional principles underlying the cognitive representation of the human brain, allowing for (e.g.) a detailed parcellation of the brain volume into functional-specialized regions. Additionally, the IBC project pertains to the development of a neurocognitive atlas based on the functional signatures of mutual cognitive components between task descriptors.
Remote Sensing and Computational, Evolutionary, Supercomputing, and Intellige...University of Maribor
Slides from talk:
Aleš Zamuda: Remote Sensing and Computational, Evolutionary, Supercomputing, and Intelligent Systems.
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Inter-Society Networking Panel GRSS/MTT-S/CIS Panel Session: Promoting Connection and Cooperation
https://www.etran.rs/2024/en/home-english/
Immersive Learning That Works: Research Grounding and Paths ForwardLeonel Morgado
We will metaverse into the essence of immersive learning, into its three dimensions and conceptual models. This approach encompasses elements from teaching methodologies to social involvement, through organizational concerns and technologies. Challenging the perception of learning as knowledge transfer, we introduce a 'Uses, Practices & Strategies' model operationalized by the 'Immersive Learning Brain' and ‘Immersion Cube’ frameworks. This approach offers a comprehensive guide through the intricacies of immersive educational experiences and spotlighting research frontiers, along the immersion dimensions of system, narrative, and agency. Our discourse extends to stakeholders beyond the academic sphere, addressing the interests of technologists, instructional designers, and policymakers. We span various contexts, from formal education to organizational transformation to the new horizon of an AI-pervasive society. This keynote aims to unite the iLRN community in a collaborative journey towards a future where immersive learning research and practice coalesce, paving the way for innovative educational research and practice landscapes.
Describing and Interpreting an Immersive Learning Case with the Immersion Cub...Leonel Morgado
Current descriptions of immersive learning cases are often difficult or impossible to compare. This is due to a myriad of different options on what details to include, which aspects are relevant, and on the descriptive approaches employed. Also, these aspects often combine very specific details with more general guidelines or indicate intents and rationales without clarifying their implementation. In this paper we provide a method to describe immersive learning cases that is structured to enable comparisons, yet flexible enough to allow researchers and practitioners to decide which aspects to include. This method leverages a taxonomy that classifies educational aspects at three levels (uses, practices, and strategies) and then utilizes two frameworks, the Immersive Learning Brain and the Immersion Cube, to enable a structured description and interpretation of immersive learning cases. The method is then demonstrated on a published immersive learning case on training for wind turbine maintenance using virtual reality. Applying the method results in a structured artifact, the Immersive Learning Case Sheet, that tags the case with its proximal uses, practices, and strategies, and refines the free text case description to ensure that matching details are included. This contribution is thus a case description method in support of future comparative research of immersive learning cases. We then discuss how the resulting description and interpretation can be leveraged to change immersion learning cases, by enriching them (considering low-effort changes or additions) or innovating (exploring more challenging avenues of transformation). The method holds significant promise to support better-grounded research in immersive learning.
Current Ms word generated power point presentation covers major details about the micronuclei test. It's significance and assays to conduct it. It is used to detect the micronuclei formation inside the cells of nearly every multicellular organism. It's formation takes place during chromosomal sepration at metaphase.
ESPP presentation to EU Waste Water Network, 4th June 2024 “EU policies driving nutrient removal and recycling
and the revised UWWTD (Urban Waste Water Treatment Directive)”
The debris of the ‘last major merger’ is dynamically youngSérgio Sacani
The Milky Way’s (MW) inner stellar halo contains an [Fe/H]-rich component with highly eccentric orbits, often referred to as the
‘last major merger.’ Hypotheses for the origin of this component include Gaia-Sausage/Enceladus (GSE), where the progenitor
collided with the MW proto-disc 8–11 Gyr ago, and the Virgo Radial Merger (VRM), where the progenitor collided with the
MW disc within the last 3 Gyr. These two scenarios make different predictions about observable structure in local phase space,
because the morphology of debris depends on how long it has had to phase mix. The recently identified phase-space folds in Gaia
DR3 have positive caustic velocities, making them fundamentally different than the phase-mixed chevrons found in simulations
at late times. Roughly 20 per cent of the stars in the prograde local stellar halo are associated with the observed caustics. Based
on a simple phase-mixing model, the observed number of caustics are consistent with a merger that occurred 1–2 Gyr ago.
We also compare the observed phase-space distribution to FIRE-2 Latte simulations of GSE-like mergers, using a quantitative
measurement of phase mixing (2D causticality). The observed local phase-space distribution best matches the simulated data
1–2 Gyr after collision, and certainly not later than 3 Gyr. This is further evidence that the progenitor of the ‘last major merger’
did not collide with the MW proto-disc at early times, as is thought for the GSE, but instead collided with the MW disc within
the last few Gyr, consistent with the body of work surrounding the VRM.
Travis Hills' Endeavors in Minnesota: Fostering Environmental and Economic Pr...Travis Hills MN
Travis Hills of Minnesota developed a method to convert waste into high-value dry fertilizer, significantly enriching soil quality. By providing farmers with a valuable resource derived from waste, Travis Hills helps enhance farm profitability while promoting environmental stewardship. Travis Hills' sustainable practices lead to cost savings and increased revenue for farmers by improving resource efficiency and reducing waste.
hematic appreciation test is a psychological assessment tool used to measure an individual's appreciation and understanding of specific themes or topics. This test helps to evaluate an individual's ability to connect different ideas and concepts within a given theme, as well as their overall comprehension and interpretation skills. The results of the test can provide valuable insights into an individual's cognitive abilities, creativity, and critical thinking skills
2. Overview
What does “acoustic-to-semantic representation” stand for?
Functional fingerprint in the Auditory Cortex (AC) related to assigning meaning to sound.
Behavioral fingerprint according to a certain metric related to sound discrimination.
Understand how the brain transforms sound waves into meaningful semantic representations?
What is the fundamental question?
What are “acoustic-to-semantic representations” important for?
What are the different encoding stages of the acoustic-to-semantic transformation process?
4. Proposed Computational Models
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Biophysical Models
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Psychophysical Models
Acoustic output
Semantic output
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Natural Language Processing (NLP) models
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Deep Neural Networks (DNN) models
Assessing validity: evaluate the ability to explain behavioural and/or
neural observations of human listeners
5. Encoding natural sounds:
State-of-the-Art
Biophysical Models (variants of time frequency analysis of the sound)
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Explain fMRI patterns in Heschl’s gyrus and early auditory areas
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Superior Temporal Gyrus (STG) exhibit preferential responses to predefined category
of sounds (speech, vocalization, music and action sounds)
DNN trained on speech and music-genre recognition
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Explain fMRI patterns in STG better than biophysical models
6. Goals
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Systematic model comparison framework to assess biophysical, psychophysical, NLP
and DNN models
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Identify a hierarchy of acoustic-to-semantic representations
Approach
Compare predictions of behavioural responses and 7T fMRI responses
to natural sounds, under a cross-validation framework,
using three different features-extraction techniques:
1. Acoustic (Biophysical + Psychophysical)
2. Semantic (NLP)
3. DNN
7. Feature-extraction diagram:
Figure 1 - Panel a
Models arranged according to the cerebral-sound-processing hierarchy.
5 Acoustical Models
3 NLP Models
3 DNN
9. FMRI data: Figure 1 – Panel c
Six auditory cortical ROIs
HG=Heschl’s gyrus
PT=Planum Temporale
PP=Planum Polare
m/p/aSTG = middle/posterior/anterior
Superior Temporal Gyrus
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N=5
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Incidental 1N-back sound-repetition detection task
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Six categories of sounds:
1. human non-speech vocal
2. speech
3. animal cries
4. musical instruments
5. scenes from nature
6. tool sounds
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288 sounds: 72 per category
10. Data-analysis framework
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Model-component distances: between-stimulus cosine distance
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Behavioural data: distance matrices of perceived between-stimulus dissimilarity
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fMRI data: ROI-specific, between-stimulus euclidian distance of beta-values
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Split-half CV for fMRI data
11. Representations in models and brain
Results: Figure 2
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MDS Points = Stimuli
Highlights:
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MSR: Overlap in Acoustics
and DNN, but speech
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MSR: Clusters in NLP
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FMRI: HG and pSTG
resambling respectively
Acoustics and DNN
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FMRI: dissimilarity in STG
between speech and other
categories
12. Representations
in behavioural data
Results: Figure 2
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Significant predictions by all single-class models
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Sound category (top): R2
CV higher for DNN
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Word category (bottom): R2
CV higher for NLP
Variance-partioning analysis indicate that
DNN incorporates a large part of the
perceived-sound-dissimilarity variance
predicted by the other models
Commonality-Analysis Approach
13. Representations
in fMRI data
Results: Figure 3
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HG:Significant predictions by all single-class models
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HG: only Aco predicted unique variance and
Aco+DNN predicted common variance
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STG: single-class and unique DNN gave better
predictions
Variance-partioning analysis showed that
DNN predicted variance could not be predicted
by the other models.
Commonality-Analysis Approach
14. Prediction of fMRI data by hidden DNN
representations of perceived sound:
Figure 5
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Behavioural and fMRI responses are best predicted by intermediate layers in HG and pSTG.
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Incremental contributions of late layers for fMRI resposes in STG
15. Prediction of behavioral data by hidden
DNN representations of fMRI
responses: Figure 6
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Significant predictions of sound-dissimilarity variance by all ROIs and unique HG and pSTG
16. Conclusions
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DNN provide the best predictions in both behavioural and neural datasets
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DNN outperformed for the sound dissimilarity task, but NLP outperformed for word-
dissimilarity task in behavioural + non-primary STG responses and Acoustic Model
matched DNN in HG responses. This dissociation might indicate the contribution of
DNN neither acoustic nor semantic, they are intermediate.
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The layer-by-layer DNN analysis show that intermediate layers contribute
maximally to the predictions in HG and STG, suggesting the encoding of medium-
level auditory features as lower dimensional manifolds.