HPLC- high performance liquid chromatographyhirenthakkar4
HPLC- high performance liquid chromatography or high pressure liquid chromatography overall review
good animation & GIF for presentation
detectors in detail
basic instrumentation with detectors
Introduction of mass spectrometer - basic types of mass analyzer Creative Proteomics
The mass analyzer is the heart of the mass spectrometer, which takes ionized masses and separates them based on mass to charge ratios. There are several general types of mass analyzers, including magnetic sector, time of flight, quadrupole, ion trap
This is a type of chromatography in which similar charged ions are separated by using ion exchange resin, that exchanges ions according to their relative affinities.
HPLC- high performance liquid chromatographyhirenthakkar4
HPLC- high performance liquid chromatography or high pressure liquid chromatography overall review
good animation & GIF for presentation
detectors in detail
basic instrumentation with detectors
Introduction of mass spectrometer - basic types of mass analyzer Creative Proteomics
The mass analyzer is the heart of the mass spectrometer, which takes ionized masses and separates them based on mass to charge ratios. There are several general types of mass analyzers, including magnetic sector, time of flight, quadrupole, ion trap
This is a type of chromatography in which similar charged ions are separated by using ion exchange resin, that exchanges ions according to their relative affinities.
Theoretical background
Cont’d
Ion exchangers
There are three classes of ion exchangers , these include
Resins
Gels
Inorganic exchangers
Selectivity for ion exchange
In general , ion exchangers favour the binding of ions of
Higher charge
Decreased hydrated radius
Increased polarizability
Ion exchange resins are used for the separation of small molecules.
Ion exchange gels are used for the separation of large molecules like protiens ,nucleic acids.
Separations involving harsh chemical conditions(high temperature , high radiation levels, strongly basic solutions or powerful oxidizing agents) employ inorganic ion exchangers
Advantages
Detectability: useful for the detection of many in-organic salts and organic ions with poor uv absorptivity like alkyl amines or sulfonates.
Preparative separations: usually preferred because of the availability of volatile buffers . volatile buffers makes the removal of mobile phase easier.
Useful to resolve very complex samples, i.e in the case of multi step separation
Useful for separation of mixtures of biological origin, in organic salts and some organo- metallics
Applications
Conversion from one salt to other e.g we can prepare tetra propyl ammonium hydroxide from a tetra propyl salt of some other anion.
household (laundry detergents and water filters) to produce soft water
Ion exchange is used to prepare de-ionized water
separate and purify metals
Dealkalization
analysis and purification of immunoglobulins
Separation of inorganic ions
this slide contains all the basic about the topic ion exchange chromatography which contains all important information about topic in very easy language. it will be helpful for BSc, pharmacy and biomedical student.
Ion exchange chromatography works under the principle of reversible adsorption and this method involves the separation of ions by using different types of exchange resins based on the ions to be separated.
Ion-exchange chromatography (IEC) is an important analytical technique used for the separation and determination of ionic compounds, together with ion-partition/interaction and ion-exclusion chromatography. It is based on the ionic interactions between ionic and polar analytes, ions present in the eluent and ionic functional groups fixed to the chromatographic support.
Principles of Ion -exchange chromatography, High performance liquid chromatography (HPLC) , chromatography generally stands for a technique which separates mixtures based on different dynamic sharing of their components between two distinct physio-chemical environments called mobile and stationary phase by repeated absorption/desorption steps. Ion chromatography (IC) is a member of large family of liquid phase
chromatographic methods (that is a mobile phase is a liquid and a stationary phase is a
solid).
Slide share on Ion-Exchange chromatography
It contains-
Introduction of ion exchange,
principle of ion exchange(cat-ion exchanger and an-ion exchanger),
mechanism of ion exchange,
types of resins,
instrumentation of IEC,
its properties,
factors affecting, and
its applications.
Uploaded by:-
Affan Ahmad
B.pharm final year
Sai Meer College of Pharmacy
Chhibramau Kannauj U.P. India
The slides covers brief description of ion exclusion chromatography. i hope the slides will be helpful
for any further details you can contact me through email.
mail id - sobhigaba@gmail.com
INSTRUMENTAL METHODS OF ANALYSIS, B.PHARM 7TH SEM. AND FOR BSC,MSC CHEMISTRY. This is Geeta prasad kashyap (Asst. Professor), SVITS, Bilaspur (C.G) 495001
Chromatography, chromatography techniques,ion exchange chromatography, elution based chromatography,types of chromatography,types of resin,ideal characteristics of resin, physical properties of resin, factors affecting ion exchange process, application of resin, elution of resin, regeneration of resin, Equilibration in ion exchange chromatography, application of ion exchange chromatography
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
The increased availability of biomedical data, particularly in the public domain, offers the opportunity to better understand human health and to develop effective therapeutics for a wide range of unmet medical needs. However, data scientists remain stymied by the fact that data remain hard to find and to productively reuse because data and their metadata i) are wholly inaccessible, ii) are in non-standard or incompatible representations, iii) do not conform to community standards, and iv) have unclear or highly restricted terms and conditions that preclude legitimate reuse. These limitations require a rethink on data can be made machine and AI-ready - the key motivation behind the FAIR Guiding Principles. Concurrently, while recent efforts have explored the use of deep learning to fuse disparate data into predictive models for a wide range of biomedical applications, these models often fail even when the correct answer is already known, and fail to explain individual predictions in terms that data scientists can appreciate. These limitations suggest that new methods to produce practical artificial intelligence are still needed.
In this talk, I will discuss our work in (1) building an integrative knowledge infrastructure to prepare FAIR and "AI-ready" data and services along with (2) neurosymbolic AI methods to improve the quality of predictions and to generate plausible explanations. Attention is given to standards, platforms, and methods to wrangle knowledge into simple, but effective semantic and latent representations, and to make these available into standards-compliant and discoverable interfaces that can be used in model building, validation, and explanation. Our work, and those of others in the field, creates a baseline for building trustworthy and easy to deploy AI models in biomedicine.
Bio
Dr. Michel Dumontier is the Distinguished Professor of Data Science at Maastricht University, founder and executive director of the Institute of Data Science, and co-founder of the FAIR (Findable, Accessible, Interoperable and Reusable) data principles. His research explores socio-technological approaches for responsible discovery science, which includes collaborative multi-modal knowledge graphs, privacy-preserving distributed data mining, and AI methods for drug discovery and personalized medicine. His work is supported through the Dutch National Research Agenda, the Netherlands Organisation for Scientific Research, Horizon Europe, the European Open Science Cloud, the US National Institutes of Health, and a Marie-Curie Innovative Training Network. He is the editor-in-chief for the journal Data Science and is internationally recognized for his contributions in bioinformatics, biomedical informatics, and semantic technologies including ontologies and linked data.
This pdf is about the Schizophrenia.
For more details visit on YouTube; @SELF-EXPLANATORY;
https://www.youtube.com/channel/UCAiarMZDNhe1A3Rnpr_WkzA/videos
Thanks...!
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
4. “ Also called ion chromatography.
Process that allows separation of ions and
polar molecules based on their ion
exchanger.
Charged molecules including large proteins,
small nucleotides and amino acids.
4
5. 5
ION EXCHANGE RESIN--
Column filled with a charged
stationary phase on a solid
support.
CATION EXCHAGE
CHROMATOGRAPHY--
separates out cations using
negatively charged resins.
ANION EXCHANGE
CHROMATOGRAPHY–-
separates out anions using
positively charged resin.
11. 11
Two groups are used to prepare ion
exchange resins:1.Polystyrene.
2.Cellulose.
Polystyrene resins- made by the
polymerization reaction of
styrene and divinyl benzene.
High concentration of divinyl
benzene-produce higher cross
linkages.
12. 12
Polystyrene resins-highly useful for separating
small molecular weight compounds.
Cross linkage
Rigidity
Swelling
Porosity
Solubility of polymeric structure
Sulfonic acids--strong acids
good proton dissociation ability.
13. 13
Resins substituted with sulfonic acid groups-
strong catalytic exchangers.
Eg for cationic exchanger-carboxymethyl
cellulose(CM cellulose).
Eg for anionic exchanger-DEAE cellulose.
15. 15
1.Swelling of medium
Makes functional groups to be
exposed for ion exchange.
Swelling of anionic exchangers -
carried out by treating it first with
an acid(0.5 N HCl) and then with
base.
16. 16
Swelling of cationic exchangers-matrix
is treated with EDTA for impurity
eliminations.
17. 17
2.Removal of very small
particles
༝ Fine particles-decrease the flow rate
and reaction rate.
༝ To remove these fines exchanger is
repeatedly suspended in a large
volume of water.
19. 19
3.Equilibrium with counter ions
Accomplished by washing the exchangers
with different reagents depending upon the
desired counter ion to be introduced.
20. 20
NaOH
Counter ions to be introduced-”Na+”
HCl
Counter ion to be introduced-”H+”
NaNO3
Counter ion to be introduced-”NO3”
24. 24
Ion exchange separations- carried out
in columns packed with an ion
exchanger .
Ion exchangers-commercially available
made up of styrene and divinyl
benzene.
DEAE Cellulose –anionic exchanger
CM Cellulose-cationic exchanger
Choice of exchanger-depends upon
particle to be separated.
25. 25
To separate anions-anionic exchangers is
used.
To separate cations-cationic exchangers
is used.
At first column is filled with ion
exchanger-sample is applied followed by
buffer.
Common buffers used: Tris-buffer,
Pyridine-buffer, Acetate –buffer,
Citrate and phosphate buffers.
26. 26
Particles which have high affinity for
ion exchanger—come down along with
the buffers.
In the next step Tightly bound
particles are separated using
corresponding buffer.
Then these particles are analyzed
spectroscopically.
29. 29
Applications of ion
exchange chromatography
Used in analysis of amino acids.
To determine the base composition
of nucleic acid.
Most effective method for water
purification.(softening of drinking
water)
30. 30
Separation of proteins.
Useful for Separation of many
vitamins, other biological amines
and organic acids & bases.
33. 33
WHAT TO REMEMBER!!!
༝ IEC definition.
༝ Principle.
༝ Cationic anionic exchangers.
༝ Preparation of exchange medium.
༝ Advantages.
༝ Disadvantages.
༝ Applications.
34. 34
QUESTIONS!!!!!
༝ What is ion-exchange chromatography?
༝ Write the principle of IEC.
༝ What are anionic and cationic exchangers? write an
example for each.
༝ What is pre-cycling?
༝ Write a note on preparation of exchange medium.
༝ Buffer for anionic exchange chromatography ----
༝ Buffer for cationic exchange chromatography ----
༝ What are the advantages and disadvantages of IEC?
༝ Short note on applications of IEC.