- The mRNA-1273 vaccine induced robust antibody and neutralizing responses against SARS-CoV-2 in all participants after the first dose. A second dose led to even stronger responses, especially in the 100 μg and 250 μg groups. Systemic side effects were mostly mild or moderate. This interim report provides support for mRNA-1273 as a promising COVID-19 vaccine candidate warranting further development and evaluation.
mRNA rather than DNA may become the nucleotide framework for new classes of drugs and vaccines. Exciting preclinical results in prophylaxis and initial clinical data in oncology suggest that mRNA technology could be translated into improvements in lung cancer and other diseases.
The document discusses hypersensitivity reactions, immune stimulation, and immune suppression. It defines hypersensitivity as increased reactivity to an antigen that an animal has been previously exposed to. Immune stimulation refers to stimulating the immune system through external sources like vaccines to confer a protective effect against microbes. Immune suppression involves deliberately or unintentionally suppressing the immune system through diseases, drugs before transplants, or chemotherapy which increases risk of infection.
Deciphering the Dynamic Coupling of the Human Immune System and the Gut Micro...Larry Smarr
This document discusses Dr. Larry Smarr's research into understanding the relationship between the human immune system and gut microbiome in Crohn's disease. Dr. Smarr sequenced his own genome to identify genetic polymorphisms associated with higher risk of Crohn's disease. He also conducted fine-time resolution sampling to study the distinct dynamics of the innate and adaptive immune system in health and disease. Additionally, he found major shifts in the gut microbiome between healthy individuals and those with two forms of inflammatory bowel disease.
This document summarizes research into developing an anti-HIV vaccine using nucleoside-modified mRNA encoding envelope proteins. Key points:
- Researchers developed mRNA vaccines optimized for protein expression by incorporating modified nucleosides, UTRs, caps, and tails to generate HIV envelope proteins.
- Mice were primed with intradermal mRNA followed by an intramuscular protein boost to achieve strong T cell and B cell responses.
- The mRNA vaccine induced high levels of IFN-γ, TNF-α, IL-2 in antigen-specific T cells and antibody titers, demonstrating the potential of nucleoside-modified mRNA vaccines for infectious diseases like HIV.
Stem-cell based gene therapy aims to genetically modify cells to resist HIV infection through three main strategies: 1) targeting cellular genes essential for viral replication like CCR5, 2) directly targeting HIV gene expression, and 3) introducing genes that interfere with HIV replication. Combination therapy employing multiple genetic modifications may help prevent viral escape. Engineering immunity against HIV through therapeutic vaccines or modified T-cells and stem cells shows promise in controlling infection.
This document provides an overview of recombinant DNA technology and its tools. It discusses how recombinant DNA technology has been used to produce proteins like human insulin through gene cloning in yeast cells and plants. The key developers of this technology in 1973 are mentioned. The technology has proven important for producing vaccines and protein therapies to treat diseases like hemophilia. Restriction enzymes are also discussed as important tools that act as molecular scissors to cut DNA at specific recognition sequences. Their nomenclature and discovery by Arber, Smith, and Nathans in 1978 is noted.
Chapat et al.-orf1 et orf2 cmi with CIRCOVAC vaccination in sowsMerial EMEA
This study assessed the cell-mediated immune response against PCV2 ORF1 and ORF2 proteins in pigs vaccinated with an inactivated PCV2 vaccine. The results showed that vaccination induced gamma interferon production against both ORF1 and ORF2, primed pigs for interleukin-2 secretion after challenge, and stimulated antibody responses. In contrast, unvaccinated pigs only developed immune responses after challenge. The cellular immune response detected is expected to contribute to reduced PCV2 replication in vaccinated pigs. This highlights the importance of including both ORF1 and ORF2 in PCV2 vaccine design.
- The mRNA-1273 vaccine induced robust antibody and neutralizing responses against SARS-CoV-2 in all participants after the first dose. A second dose led to even stronger responses, especially in the 100 μg and 250 μg groups. Systemic side effects were mostly mild or moderate. This interim report provides support for mRNA-1273 as a promising COVID-19 vaccine candidate warranting further development and evaluation.
mRNA rather than DNA may become the nucleotide framework for new classes of drugs and vaccines. Exciting preclinical results in prophylaxis and initial clinical data in oncology suggest that mRNA technology could be translated into improvements in lung cancer and other diseases.
The document discusses hypersensitivity reactions, immune stimulation, and immune suppression. It defines hypersensitivity as increased reactivity to an antigen that an animal has been previously exposed to. Immune stimulation refers to stimulating the immune system through external sources like vaccines to confer a protective effect against microbes. Immune suppression involves deliberately or unintentionally suppressing the immune system through diseases, drugs before transplants, or chemotherapy which increases risk of infection.
Deciphering the Dynamic Coupling of the Human Immune System and the Gut Micro...Larry Smarr
This document discusses Dr. Larry Smarr's research into understanding the relationship between the human immune system and gut microbiome in Crohn's disease. Dr. Smarr sequenced his own genome to identify genetic polymorphisms associated with higher risk of Crohn's disease. He also conducted fine-time resolution sampling to study the distinct dynamics of the innate and adaptive immune system in health and disease. Additionally, he found major shifts in the gut microbiome between healthy individuals and those with two forms of inflammatory bowel disease.
This document summarizes research into developing an anti-HIV vaccine using nucleoside-modified mRNA encoding envelope proteins. Key points:
- Researchers developed mRNA vaccines optimized for protein expression by incorporating modified nucleosides, UTRs, caps, and tails to generate HIV envelope proteins.
- Mice were primed with intradermal mRNA followed by an intramuscular protein boost to achieve strong T cell and B cell responses.
- The mRNA vaccine induced high levels of IFN-γ, TNF-α, IL-2 in antigen-specific T cells and antibody titers, demonstrating the potential of nucleoside-modified mRNA vaccines for infectious diseases like HIV.
Stem-cell based gene therapy aims to genetically modify cells to resist HIV infection through three main strategies: 1) targeting cellular genes essential for viral replication like CCR5, 2) directly targeting HIV gene expression, and 3) introducing genes that interfere with HIV replication. Combination therapy employing multiple genetic modifications may help prevent viral escape. Engineering immunity against HIV through therapeutic vaccines or modified T-cells and stem cells shows promise in controlling infection.
This document provides an overview of recombinant DNA technology and its tools. It discusses how recombinant DNA technology has been used to produce proteins like human insulin through gene cloning in yeast cells and plants. The key developers of this technology in 1973 are mentioned. The technology has proven important for producing vaccines and protein therapies to treat diseases like hemophilia. Restriction enzymes are also discussed as important tools that act as molecular scissors to cut DNA at specific recognition sequences. Their nomenclature and discovery by Arber, Smith, and Nathans in 1978 is noted.
Chapat et al.-orf1 et orf2 cmi with CIRCOVAC vaccination in sowsMerial EMEA
This study assessed the cell-mediated immune response against PCV2 ORF1 and ORF2 proteins in pigs vaccinated with an inactivated PCV2 vaccine. The results showed that vaccination induced gamma interferon production against both ORF1 and ORF2, primed pigs for interleukin-2 secretion after challenge, and stimulated antibody responses. In contrast, unvaccinated pigs only developed immune responses after challenge. The cellular immune response detected is expected to contribute to reduced PCV2 replication in vaccinated pigs. This highlights the importance of including both ORF1 and ORF2 in PCV2 vaccine design.
Improving methodologies for rapid diagnosis of coinfection in plants (updated...Benjamin Schwessinger
This is a talk by Gamran Green an undergrad summer student from University of New South Wales at ANU 2016/17. Nice example of how MinION, Python, and Blast can be used to introduce students to novel technologies. Gamran didn't have any experience in plants, plant pathology, genomics, or scripting before the start of the project. Two months later this. Well done!
Advances in genetic basis for animal diseasesRitasree Sarma
Genetic resistance and tolerance in animals can help address issues with traditional disease control methods like drugs. Genetic factors contribute to an animal's ability to resist a pathogen. Researchers study genetic resistance at species, breed, and individual levels. Identifying genetic markers and polymorphisms associated with resistance can help breed disease-resistant animals through selection. Approaches include transgenic modification to introduce resistance genes and genome editing to modify endogenous genes. Future work involves functional genomics to further understand host-pathogen interactions and develop new disease management strategies.
Vaccine (L. vacca = cow) is a preparation/suspension or extract of dead/attenuated (weakened) germs of a disease which on inoculation (injection) into a healthy person provides temporary/permanent active/passive immunity by inducing antibodies formation.
Thus antibody provoking agents are called vaccines.
Gene therapy involves introducing functional genes into patients' cells to treat diseases caused by defective genes. It works by replacing mutated genes with healthy copies, inactivating mutated genes, or introducing new genes to fight diseases. The process involves identifying the defective gene, cloning the normal gene, selecting target cells, and inserting the functional gene into the host DNA using viruses to deliver the new gene. Engineered cells are then injected into patients so the functional gene can correct the disorder.
Gene therapy involves inserting a normal gene into a patient's cells to treat a genetic disorder, such as cystic fibrosis. Scientists are trying to develop gene therapy for cystic fibrosis by putting copies of the normal gene into patients' cells. Some early tests on cystic fibrosis patients showed improvements, but these did not last. In the future, gene therapy may be used to prevent genetic diseases by modifying genes in sex or egg cells so all cells have the correct version. However, gene therapy of sex cells is currently illegal.
This document reviews the current status of natural virus resistance genes and prospects for deploying these genes against virus infections. It discusses dominant resistance genes that confer monogenic resistance through recognition of viral avirulence factors. To date, 12 examples have been characterized that fall into the nucleotide binding site-leucine rich repeat class. Recessive resistance genes that cause impaired susceptibility by disrupting host factors required for virus infection are also described. These include mutations in translation initiation factors that cause resistance to various potyviruses and other viruses. Advances in genomics and molecular techniques are improving prospects for identifying and utilizing natural virus resistance genes in crop breeding programs.
Analyses of Regulatory Regions of Human TNFAIP3 GeneMark Liber
The document analyzes regulatory regions of the human TNFAIP3 gene, which encodes the A20 protein. Three BACs containing different regulatory regions were injected into mice to create humanized mouse models. The mice were bred to be deficient in mouse A20 but express a specific human A20 transgene. Analysis found the Δ-Down BAC mice, missing enhancers downstream of TNFAIP3, had decreased human A20 expression and RA/SLE-like phenotypes. This demonstrates the importance of the downstream enhancers for inducible A20 expression and inflammation control.
mRNA vaccine is a novel vaccine technology, which delivers mRNA that encoding the antigen protein of pathogen to the cell, and expresses the antigen protein, and then stimulates the immune response of the body.
Creative Biolabs has developed non-replicating mRNA vaccine platform, mRNA vaccine platform, mRNA pharmacology optimization platform, and and Self-amplifying mRNA vaccine platform to spport your vaccine researches. If you need more information about mRNA vaccine, please follow us.
The document discusses several studies on HIV prevention efforts and viral replication. It summarizes trial results showing some vaccine and microbicide trials were disappointing or even dangerous for participants. It also discusses factors influencing viral replication rates in different cell types like metabolic activity and transcription activity. Key host proteins like APOBEC3G, NFAT, and Cyclin-T that are required for HIV infection are identified. A hypothetical virological synapse is discussed as a mechanism for direct cell-to-cell transmission without producing extracellular virus.
Studies on cycloferon by VICTORIA, RUBEN GOMBALANDI, IMMUNOMODULATORSRuben Gombalandi
Cycloferon induced changes in the stomach of old rats. In rats killed 7 days after cycloferon injection, the number of chief cells dropped by 13% compared to controls. The area of zymogenic cells and their nuclei was also less than controls. By day 90, parietal cells increased in number by 42% compared to controls, but morphometric data did not show functional activity increases. By the end of the 180-day experiment, parietal cells increased by 21% and chief cells by 28% compared to controls. Cycloferon was found to activate T-cells to produce IL-2, which through TGF-α expressed in stomach cells, mediated proliferation of secretory cells over the
Methodology for development of defined deletion mutant vaccine for salmonellosisBhoj Raj Singh
1. The document discusses methodology for developing defined deletion mutant vaccines for salmonellosis. Common gene targets for deletion mutagenesis in Salmonella include galE, aroA, cya, crp, PhoP, PhoQ and others.
2. Methods for producing defined deletion mutants include using suicide plasmids for homologous recombination to replace target genes with truncated versions lacking internal sequences. Several techniques for making precise deletions are described.
3. Safety and efficacy testing in animal models is required before field trials, including testing for attenuation, immunogenicity, stability of mutations, safety, and ability to prevent disease caused by wild-type strains.
Better ways to predict effectors for functional characterization and resistan...Kelsey Wood
This document discusses better methods for predicting plant pathogen effectors and identifying resistance genes. It finds that the traditional RXLR motif for predicting effectors is limited, especially in downy mildews which exhibit variants like GXLR. A novel WY domain is found to be prevalent in effectors from Phytophthora and downy mildews, identifying more candidates than RXLR alone. Some Lettuce downy mildew WY effectors can suppress plant immunity and elicit cell death. Recognition of specific WY effectors is linked to resistance in plant varieties, allowing rapid mapping of resistance genes. The study concludes the WY domain should be used for effector prediction in these pathogens, as RXLR alone
In this presentation, I talked about the new mRNA vaccine that is authorized for the prevention of coronavirus infection.
mRNA 1273 is developed by Moderna in the US and has shown almost 94% effectiveness
QBB Engineering Internship Program final presentationMaLi Dong
This document summarizes research on the interaction between Adeno-associated virus (AAV2) and its host cell receptor, AAVR. It describes AAV2 as a non-pathogenic virus that enters cells through receptor-mediated endocytosis without integrating into the host genome. It then discusses experiments expressing the AAVR protein in E. coli with His-tags to test binding with AAV2. Gel electrophoresis showed little difference between short and long induction times. Electron microscopy images of grids showed the AAV2 VLP-KL-His complex aggregated around the virus, indicating binding.
Sleep and the Gut Microbiome-bioRxiv-199075 1Jon Lendrum
This document provides supplemental information on the methods used to administer antibiotics to deplete the gut microbiota, construct 16S metagenomic libraries from fecal samples, and analyze the resulting sequencing data. It describes how: (1) the initial antibiotic cocktail was too toxic and had to be modified by removing an antifungal and decreasing antibiotic concentrations, (2) 16S rRNA gene V3/V4 regions were amplified and sequenced, (3) sequencing reads were processed and clustered into OTUs using QIIME, and (4) alpha and beta diversity analyses were performed to characterize microbial communities. References are also provided.
Gene therapy has potential to treat many genetic diseases by introducing normal genes into patients' cells to compensate for mutated genes. Some potential target diseases include:
1) Type 1 diabetes, by inserting a gene for insulin production regulated by glucose levels, allowing rats to maintain normal blood sugar for over 8 months.
2) Cancer, using oncogene inactivation to reduce cancer-causing proteins or cell-targeted suicide genes combined with prodrugs to selectively kill cancer cells.
3) Parkinson's disease, by delivering a gene for the inhibitory neurotransmitter GABA into the brain to reduce tremors.
4) X-linked severe combined immunodeficiency (SCID), commonly known as "bubble
Diagnosis of inherited disorders and infectious disordersvishnupriya456
Inherited disorders can be caused by genetic abnormalities passed down from parents or spontaneous genetic mutations. Diagnosis techniques include DNA probes tagged with radioactive isotopes to detect mutations, restriction enzyme analysis to study DNA fragments, and analysis of disease-related genes using PCR and fluorescent in situ hybridization. Examples provided are diagnosis of sickle cell anemia, cystic fibrosis, tuberculosis, cancer, and Down syndrome.
Gene therapy involves introducing genetic material into cells to treat disease. It is used for inherited disorders, cancers, and infectious diseases. Viruses are commonly used as vectors to deliver therapeutic genes, though safety issues exist. Some early successes included treating severe combined immunodeficiency using retroviruses to deliver the ADA gene ex vivo. However, the first death in gene therapy occurred treating ornithine transcarbamylase deficiency using an adenovirus vector, highlighting the risks. Improved delivery methods like liposomes may help overcome current limitations and advance this promising approach.
1. The document discusses using chloroplasts to produce vaccine antigens and autoantigens like myelin basic protein (MBP) to induce oral tolerance and potentially treat multiple sclerosis.
2. It describes constructing vectors to express cytokines like IL-4 and IL-10 along with MBP to simplify oral delivery and reduce inflammation.
3. The document also discusses using chloroplasts to produce the cholera toxin B subunit (CTB) fused to a rotavirus protein to develop a dual oral vaccine for cholera and rotavirus diarrhea.
1) Genome editing-based therapies are a promising alternative to highly-active antiretroviral therapy (HAART) for treating HIV infection. These therapies aim to produce immune cells resistant to HIV using tools like zinc finger nucleases, TALENs, and CRISPR/Cas9.
2) The major strategy involves modifying cells like hematopoietic stem cells and T cells in vitro before reinfusing them into patients. Recent genome editing therapies have targeted HIV genes like CCR5, CRX4, and the HIV provirus.
3) While genome editing therapies for HIV have made progress and entered clinical trials, concerns remain around their safety, choice of targets as HIV can switch receptors
This document discusses the challenges involved in developing an HIV vaccine. It provides background on HIV, describing it as a retrovirus that targets CD4+ T cells. It reviews past vaccine trials, noting the only modest success of the RV144 trial. It discusses the massive diversity of HIV strains as a major challenge. It outlines various vaccine design strategies that have been pursued, including recombinant proteins, DNA vaccines, viral vectors, and approaches using broadly neutralizing antibodies. Throughout, it emphasizes the need for a vaccine to elicit robust cellular and humoral immune responses against a wide range of HIV subtypes to achieve protective efficacy.
Improving methodologies for rapid diagnosis of coinfection in plants (updated...Benjamin Schwessinger
This is a talk by Gamran Green an undergrad summer student from University of New South Wales at ANU 2016/17. Nice example of how MinION, Python, and Blast can be used to introduce students to novel technologies. Gamran didn't have any experience in plants, plant pathology, genomics, or scripting before the start of the project. Two months later this. Well done!
Advances in genetic basis for animal diseasesRitasree Sarma
Genetic resistance and tolerance in animals can help address issues with traditional disease control methods like drugs. Genetic factors contribute to an animal's ability to resist a pathogen. Researchers study genetic resistance at species, breed, and individual levels. Identifying genetic markers and polymorphisms associated with resistance can help breed disease-resistant animals through selection. Approaches include transgenic modification to introduce resistance genes and genome editing to modify endogenous genes. Future work involves functional genomics to further understand host-pathogen interactions and develop new disease management strategies.
Vaccine (L. vacca = cow) is a preparation/suspension or extract of dead/attenuated (weakened) germs of a disease which on inoculation (injection) into a healthy person provides temporary/permanent active/passive immunity by inducing antibodies formation.
Thus antibody provoking agents are called vaccines.
Gene therapy involves introducing functional genes into patients' cells to treat diseases caused by defective genes. It works by replacing mutated genes with healthy copies, inactivating mutated genes, or introducing new genes to fight diseases. The process involves identifying the defective gene, cloning the normal gene, selecting target cells, and inserting the functional gene into the host DNA using viruses to deliver the new gene. Engineered cells are then injected into patients so the functional gene can correct the disorder.
Gene therapy involves inserting a normal gene into a patient's cells to treat a genetic disorder, such as cystic fibrosis. Scientists are trying to develop gene therapy for cystic fibrosis by putting copies of the normal gene into patients' cells. Some early tests on cystic fibrosis patients showed improvements, but these did not last. In the future, gene therapy may be used to prevent genetic diseases by modifying genes in sex or egg cells so all cells have the correct version. However, gene therapy of sex cells is currently illegal.
This document reviews the current status of natural virus resistance genes and prospects for deploying these genes against virus infections. It discusses dominant resistance genes that confer monogenic resistance through recognition of viral avirulence factors. To date, 12 examples have been characterized that fall into the nucleotide binding site-leucine rich repeat class. Recessive resistance genes that cause impaired susceptibility by disrupting host factors required for virus infection are also described. These include mutations in translation initiation factors that cause resistance to various potyviruses and other viruses. Advances in genomics and molecular techniques are improving prospects for identifying and utilizing natural virus resistance genes in crop breeding programs.
Analyses of Regulatory Regions of Human TNFAIP3 GeneMark Liber
The document analyzes regulatory regions of the human TNFAIP3 gene, which encodes the A20 protein. Three BACs containing different regulatory regions were injected into mice to create humanized mouse models. The mice were bred to be deficient in mouse A20 but express a specific human A20 transgene. Analysis found the Δ-Down BAC mice, missing enhancers downstream of TNFAIP3, had decreased human A20 expression and RA/SLE-like phenotypes. This demonstrates the importance of the downstream enhancers for inducible A20 expression and inflammation control.
mRNA vaccine is a novel vaccine technology, which delivers mRNA that encoding the antigen protein of pathogen to the cell, and expresses the antigen protein, and then stimulates the immune response of the body.
Creative Biolabs has developed non-replicating mRNA vaccine platform, mRNA vaccine platform, mRNA pharmacology optimization platform, and and Self-amplifying mRNA vaccine platform to spport your vaccine researches. If you need more information about mRNA vaccine, please follow us.
The document discusses several studies on HIV prevention efforts and viral replication. It summarizes trial results showing some vaccine and microbicide trials were disappointing or even dangerous for participants. It also discusses factors influencing viral replication rates in different cell types like metabolic activity and transcription activity. Key host proteins like APOBEC3G, NFAT, and Cyclin-T that are required for HIV infection are identified. A hypothetical virological synapse is discussed as a mechanism for direct cell-to-cell transmission without producing extracellular virus.
Studies on cycloferon by VICTORIA, RUBEN GOMBALANDI, IMMUNOMODULATORSRuben Gombalandi
Cycloferon induced changes in the stomach of old rats. In rats killed 7 days after cycloferon injection, the number of chief cells dropped by 13% compared to controls. The area of zymogenic cells and their nuclei was also less than controls. By day 90, parietal cells increased in number by 42% compared to controls, but morphometric data did not show functional activity increases. By the end of the 180-day experiment, parietal cells increased by 21% and chief cells by 28% compared to controls. Cycloferon was found to activate T-cells to produce IL-2, which through TGF-α expressed in stomach cells, mediated proliferation of secretory cells over the
Methodology for development of defined deletion mutant vaccine for salmonellosisBhoj Raj Singh
1. The document discusses methodology for developing defined deletion mutant vaccines for salmonellosis. Common gene targets for deletion mutagenesis in Salmonella include galE, aroA, cya, crp, PhoP, PhoQ and others.
2. Methods for producing defined deletion mutants include using suicide plasmids for homologous recombination to replace target genes with truncated versions lacking internal sequences. Several techniques for making precise deletions are described.
3. Safety and efficacy testing in animal models is required before field trials, including testing for attenuation, immunogenicity, stability of mutations, safety, and ability to prevent disease caused by wild-type strains.
Better ways to predict effectors for functional characterization and resistan...Kelsey Wood
This document discusses better methods for predicting plant pathogen effectors and identifying resistance genes. It finds that the traditional RXLR motif for predicting effectors is limited, especially in downy mildews which exhibit variants like GXLR. A novel WY domain is found to be prevalent in effectors from Phytophthora and downy mildews, identifying more candidates than RXLR alone. Some Lettuce downy mildew WY effectors can suppress plant immunity and elicit cell death. Recognition of specific WY effectors is linked to resistance in plant varieties, allowing rapid mapping of resistance genes. The study concludes the WY domain should be used for effector prediction in these pathogens, as RXLR alone
In this presentation, I talked about the new mRNA vaccine that is authorized for the prevention of coronavirus infection.
mRNA 1273 is developed by Moderna in the US and has shown almost 94% effectiveness
QBB Engineering Internship Program final presentationMaLi Dong
This document summarizes research on the interaction between Adeno-associated virus (AAV2) and its host cell receptor, AAVR. It describes AAV2 as a non-pathogenic virus that enters cells through receptor-mediated endocytosis without integrating into the host genome. It then discusses experiments expressing the AAVR protein in E. coli with His-tags to test binding with AAV2. Gel electrophoresis showed little difference between short and long induction times. Electron microscopy images of grids showed the AAV2 VLP-KL-His complex aggregated around the virus, indicating binding.
Sleep and the Gut Microbiome-bioRxiv-199075 1Jon Lendrum
This document provides supplemental information on the methods used to administer antibiotics to deplete the gut microbiota, construct 16S metagenomic libraries from fecal samples, and analyze the resulting sequencing data. It describes how: (1) the initial antibiotic cocktail was too toxic and had to be modified by removing an antifungal and decreasing antibiotic concentrations, (2) 16S rRNA gene V3/V4 regions were amplified and sequenced, (3) sequencing reads were processed and clustered into OTUs using QIIME, and (4) alpha and beta diversity analyses were performed to characterize microbial communities. References are also provided.
Gene therapy has potential to treat many genetic diseases by introducing normal genes into patients' cells to compensate for mutated genes. Some potential target diseases include:
1) Type 1 diabetes, by inserting a gene for insulin production regulated by glucose levels, allowing rats to maintain normal blood sugar for over 8 months.
2) Cancer, using oncogene inactivation to reduce cancer-causing proteins or cell-targeted suicide genes combined with prodrugs to selectively kill cancer cells.
3) Parkinson's disease, by delivering a gene for the inhibitory neurotransmitter GABA into the brain to reduce tremors.
4) X-linked severe combined immunodeficiency (SCID), commonly known as "bubble
Diagnosis of inherited disorders and infectious disordersvishnupriya456
Inherited disorders can be caused by genetic abnormalities passed down from parents or spontaneous genetic mutations. Diagnosis techniques include DNA probes tagged with radioactive isotopes to detect mutations, restriction enzyme analysis to study DNA fragments, and analysis of disease-related genes using PCR and fluorescent in situ hybridization. Examples provided are diagnosis of sickle cell anemia, cystic fibrosis, tuberculosis, cancer, and Down syndrome.
Gene therapy involves introducing genetic material into cells to treat disease. It is used for inherited disorders, cancers, and infectious diseases. Viruses are commonly used as vectors to deliver therapeutic genes, though safety issues exist. Some early successes included treating severe combined immunodeficiency using retroviruses to deliver the ADA gene ex vivo. However, the first death in gene therapy occurred treating ornithine transcarbamylase deficiency using an adenovirus vector, highlighting the risks. Improved delivery methods like liposomes may help overcome current limitations and advance this promising approach.
1. The document discusses using chloroplasts to produce vaccine antigens and autoantigens like myelin basic protein (MBP) to induce oral tolerance and potentially treat multiple sclerosis.
2. It describes constructing vectors to express cytokines like IL-4 and IL-10 along with MBP to simplify oral delivery and reduce inflammation.
3. The document also discusses using chloroplasts to produce the cholera toxin B subunit (CTB) fused to a rotavirus protein to develop a dual oral vaccine for cholera and rotavirus diarrhea.
1) Genome editing-based therapies are a promising alternative to highly-active antiretroviral therapy (HAART) for treating HIV infection. These therapies aim to produce immune cells resistant to HIV using tools like zinc finger nucleases, TALENs, and CRISPR/Cas9.
2) The major strategy involves modifying cells like hematopoietic stem cells and T cells in vitro before reinfusing them into patients. Recent genome editing therapies have targeted HIV genes like CCR5, CRX4, and the HIV provirus.
3) While genome editing therapies for HIV have made progress and entered clinical trials, concerns remain around their safety, choice of targets as HIV can switch receptors
This document discusses the challenges involved in developing an HIV vaccine. It provides background on HIV, describing it as a retrovirus that targets CD4+ T cells. It reviews past vaccine trials, noting the only modest success of the RV144 trial. It discusses the massive diversity of HIV strains as a major challenge. It outlines various vaccine design strategies that have been pursued, including recombinant proteins, DNA vaccines, viral vectors, and approaches using broadly neutralizing antibodies. Throughout, it emphasizes the need for a vaccine to elicit robust cellular and humoral immune responses against a wide range of HIV subtypes to achieve protective efficacy.
Immune Based Therapies for HIV Richard Trauger, phdSearch For A Cure
Presentation on Immune Based Therapies and their implications for HIV treatment presented at the Fenway Health Center, Boston, MA for the public education conference An End To AIDS - How A State Bill Can Change Everything conducted by SearchForACure.org, the Fenway Health
Center, and the MA Dept. of Public Health
This document provides an overview of HIV vaccines, including definitions, estimates of herd immunity thresholds for different diseases, types of vaccines, strategies for preventive and therapeutic HIV vaccines, and summaries of clinical trials. It discusses DNA vaccines, viral vector vaccines, dendritic cell vaccines, therapeutic vaccine candidates, and the Canadian HIV Vaccines Initiative.
This document discusses the molecular biology of hepatitis C virus (HCV). It describes HCV's structure, including its genome and genes that encode structural and non-structural proteins. These proteins and their roles in HCV's lifecycle are explained. The document also discusses HCV genotypes, mutations that contribute to its genetic diversity, and molecular targets for new antiviral drugs against HCV proteins and RNA. Resistance to direct antiviral drugs is a concern, as HCV can rapidly develop mutations due to its high replication rate and lack of a DNA stage. Understanding HCV's molecular biology is important for research, treatment, and developing new antiviral therapies.
This document describes the development of reporter Dengue virus (DENV) strains that express green fluorescent protein (GFP) or firefly luciferase (Fluc). The reporter DENV strains were characterized in vitro and in vivo. In vitro, the reporter DENV strains were infectious, sensitive to antiviral compounds and interferons, and allowed screening of a library of interferon-stimulated genes. In vivo bioluminescence imaging in mice revealed that DENV localized predominantly to lymphoid and gut tissues. A mutation (NS4B L52F) was required to confer virulence of the reporter DENV strain in mice. The reporter DENV strains provide a platform for applications such as antiviral discovery and vaccine validation.
1) The study analyzed HIV-1 sequences from 37 patients with high numbers (34 or more) of degenerate base codes in their protease/reverse transcriptase sequences, which can indicate either extensive viral evolution or dual infection. 2) Phylogenetic analysis of envelope and gag sequences from these patients found that 16 (43%) had dual HIV-1 infections, representing 1% of all sequences analyzed. 3) Patients with the highest numbers of degenerate base codes were more likely to have dual infections with different HIV-1 subtypes. The study demonstrates that routine HIV genotyping can help detect undiagnosed dual infections.
Human Immunodeficiency Virus (HIV) is an enveloped RNA virus that causes acquired immunodeficiency syndrome (AIDS). It belongs to the retrovirus family and there are two types, HIV-1 and HIV-2. HIV infects and destroys CD4+ T cells of the immune system, ultimately weakening the body's ability to fight infections and disease. Common routes of transmission include sexual contact, contaminated blood transfusions, and from mother to child during pregnancy, childbirth or breastfeeding. While antiretroviral treatment can slow the progression of the disease, there is currently no cure for HIV/AIDS.
The document discusses the characteristics, transmission, stages, and treatment of HIV/AIDS. It provides details on the structure and life cycle of the HIV virus. It describes the various classes of antiretroviral drugs used to treat HIV/AIDS, including reverse transcriptase inhibitors, protease inhibitors, integrase inhibitors, and entry inhibitors. The treatment section discusses the goals of antiretroviral therapy and examples of specific drugs from different classes like zidovudine, efavirenz, raltegravir, and maraviroc.
This document summarizes key information about HIV/AIDS, including its history, virology, diagnosis, treatment, and prevention. It describes how HIV was first identified in 1981 as the cause of AIDS, belongs to the retrovirus family, and has two types, HIV-1 and HIV-2. Over 30 million people have died of AIDS since 1981, and approximately 2.5 million people are newly infected with HIV each year.
This document provides an overview of gene therapy including its principles, approaches, development, types, vectors, delivery methods, examples, advantages, and disadvantages. Gene therapy involves inserting genes into cells to treat diseases caused by defective genes. There are two main approaches - germline gene therapy, which alters the germ cells and is passed to offspring, and somatic gene therapy, which alters non-reproductive cells only in the individual. Gene therapy development involves pre-clinical and clinical trials. Vectors like viruses are used to deliver therapeutic genes. Examples include treating severe combined immunodeficiency. While gene therapy has potential benefits, there are also risks like immune responses and ensuring genes reach the right cells.
La disponibilidad de un sistema de multiplicación del virus de la hepatitis C (VHC) infeccioso en cultivos celulares está permitiendo investigar nuevos factores de respuesta a tratamientos antivíricos en condiciones controladas. Se presentará evidencia de que el fitness vírico puede ser un factor de multiresistencia a inhibidores y quese pueden obtener eficientes reducciones de carga viral empleando diseños secuenciales de administración de inhibidores que incluyan ribavirina. Se discutirán posibilidades de aplicación clínica.
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offering a wide range of dental certified courses in different formats.for more details please visit
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A detailed description of HIV covering virology, morphology, pathogenesis, clinical stages and manifestations, laboratory diagnosis, and diagnostic strategy, and therapeutic options and prevention.
- AIDS is an acquired immunodeficiency caused by the HIV virus which affects T lymphocytes. It results in opportunistic infections and tumors due to a reduced helper T cell population. HIV is transmitted through sexual contact, blood exposure, and mother-to-child transmission.
- Laboratory diagnosis is by detecting antibodies through ELISA or detecting the virus directly through PCR, antigen detection, or viral culture. Treatment involves antiretroviral therapy using different classes of drugs targeting viral enzymes and entry.
Viruses have evolved sophisticated mechanisms to evade the host's interferon gateway, which mediates the innate antiviral response. The interferon gateway induces interferon stimulated genes upon detection of viral nucleic acids via pathways like RIG-I/MDA5 and TLRs. These genes enact antiviral effects to limit viral replication. However, many viruses encode viral evasion proteins that can inhibit interferon production and interferon stimulated genes at multiple levels of the interferon gateway. This allows viruses to continue replicating in the face of the host's antiviral defenses.
This document summarizes immune evasion strategies used by flaviviruses. It discusses how flaviviruses evade innate immune responses such as type I interferon responses and complement system activation. It also describes adaptive immune evasion mechanisms, including antigenic variation, antibody-dependent enhancement of infection, and inhibition of antigen presentation. The document provides diagrams illustrating key concepts and cites related studies on flavivirus immune evasion and modulation of host inflammatory responses.
low birth weight presentation. Low birth weight (LBW) infant is defined as the one whose birth weight is less than 2500g irrespective of their gestational age. Premature birth and low birth weight(LBW) is still a serious problem in newborn. Causing high morbidity and mortality rate worldwide. The nursing care provide to low birth weight babies is crucial in promoting their overall health and development. Through careful assessment, diagnosis,, planning, and evaluation plays a vital role in ensuring these vulnerable infants receive the specialize care they need. In India every third of the infant weight less than 2500g.
Birth period, socioeconomical status, nutritional and intrauterine environment are the factors influencing low birth weight
Histololgy of Female Reproductive System.pptxAyeshaZaid1
Dive into an in-depth exploration of the histological structure of female reproductive system with this comprehensive lecture. Presented by Dr. Ayesha Irfan, Assistant Professor of Anatomy, this presentation covers the Gross anatomy and functional histology of the female reproductive organs. Ideal for students, educators, and anyone interested in medical science, this lecture provides clear explanations, detailed diagrams, and valuable insights into female reproductive system. Enhance your knowledge and understanding of this essential aspect of human biology.
Travel Clinic Cardiff: Health Advice for International TravelersNX Healthcare
Travel Clinic Cardiff offers comprehensive travel health services, including vaccinations, travel advice, and preventive care for international travelers. Our expert team ensures you are well-prepared and protected for your journey, providing personalized consultations tailored to your destination. Conveniently located in Cardiff, we help you travel with confidence and peace of mind. Visit us: www.nxhealthcare.co.uk
Know the difference between Endodontics and Orthodontics.Gokuldas Hospital
Your smile is beautiful.
Let’s be honest. Maintaining that beautiful smile is not an easy task. It is more than brushing and flossing. Sometimes, you might encounter dental issues that need special dental care. These issues can range anywhere from misalignment of the jaw to pain in the root of teeth.
Breast cancer: Post menopausal endocrine therapyDr. Sumit KUMAR
Breast cancer in postmenopausal women with hormone receptor-positive (HR+) status is a common and complex condition that necessitates a multifaceted approach to management. HR+ breast cancer means that the cancer cells grow in response to hormones such as estrogen and progesterone. This subtype is prevalent among postmenopausal women and typically exhibits a more indolent course compared to other forms of breast cancer, which allows for a variety of treatment options.
Diagnosis and Staging
The diagnosis of HR+ breast cancer begins with clinical evaluation, imaging, and biopsy. Imaging modalities such as mammography, ultrasound, and MRI help in assessing the extent of the disease. Histopathological examination and immunohistochemical staining of the biopsy sample confirm the diagnosis and hormone receptor status by identifying the presence of estrogen receptors (ER) and progesterone receptors (PR) on the tumor cells.
Staging involves determining the size of the tumor (T), the involvement of regional lymph nodes (N), and the presence of distant metastasis (M). The American Joint Committee on Cancer (AJCC) staging system is commonly used. Accurate staging is critical as it guides treatment decisions.
Treatment Options
Endocrine Therapy
Endocrine therapy is the cornerstone of treatment for HR+ breast cancer in postmenopausal women. The primary goal is to reduce the levels of estrogen or block its effects on cancer cells. Commonly used agents include:
Selective Estrogen Receptor Modulators (SERMs): Tamoxifen is a SERM that binds to estrogen receptors, blocking estrogen from stimulating breast cancer cells. It is effective but may have side effects such as increased risk of endometrial cancer and thromboembolic events.
Aromatase Inhibitors (AIs): These drugs, including anastrozole, letrozole, and exemestane, lower estrogen levels by inhibiting the aromatase enzyme, which converts androgens to estrogen in peripheral tissues. AIs are generally preferred in postmenopausal women due to their efficacy and safety profile compared to tamoxifen.
Selective Estrogen Receptor Downregulators (SERDs): Fulvestrant is a SERD that degrades estrogen receptors and is used in cases where resistance to other endocrine therapies develops.
Combination Therapies
Combining endocrine therapy with other treatments enhances efficacy. Examples include:
Endocrine Therapy with CDK4/6 Inhibitors: Palbociclib, ribociclib, and abemaciclib are CDK4/6 inhibitors that, when combined with endocrine therapy, significantly improve progression-free survival in advanced HR+ breast cancer.
Endocrine Therapy with mTOR Inhibitors: Everolimus, an mTOR inhibitor, can be added to endocrine therapy for patients who have developed resistance to aromatase inhibitors.
Chemotherapy
Chemotherapy is generally reserved for patients with high-risk features, such as large tumor size, high-grade histology, or extensive lymph node involvement. Regimens often include anthracyclines and taxanes.
- Video recording of this lecture in English language: https://youtu.be/Pt1nA32sdHQ
- Video recording of this lecture in Arabic language: https://youtu.be/uFdc9F0rlP0
- Link to download the book free: https://nephrotube.blogspot.com/p/nephrotube-nephrology-books.html
- Link to NephroTube website: www.NephroTube.com
- Link to NephroTube social media accounts: https://nephrotube.blogspot.com/p/join-nephrotube-on-social-media.html
Nano-gold for Cancer Therapy chemistry investigatory projectSIVAVINAYAKPK
chemistry investigatory project
The development of nanogold-based cancer therapy could revolutionize oncology by providing a more targeted, less invasive treatment option. This project contributes to the growing body of research aimed at harnessing nanotechnology for medical applications, paving the way for future clinical trials and potential commercial applications.
Cancer remains one of the leading causes of death worldwide, prompting the need for innovative treatment methods. Nanotechnology offers promising new approaches, including the use of gold nanoparticles (nanogold) for targeted cancer therapy. Nanogold particles possess unique physical and chemical properties that make them suitable for drug delivery, imaging, and photothermal therapy.
Summer is a time for fun in the sun, but the heat and humidity can also wreak havoc on your skin. From itchy rashes to unwanted pigmentation, several skin conditions become more prevalent during these warmer months.
These lecture slides, by Dr Sidra Arshad, offer a simplified look into the mechanisms involved in the regulation of respiration:
Learning objectives:
1. Describe the organisation of respiratory center
2. Describe the nervous control of inspiration and respiratory rhythm
3. Describe the functions of the dorsal and respiratory groups of neurons
4. Describe the influences of the Pneumotaxic and Apneustic centers
5. Explain the role of Hering-Breur inflation reflex in regulation of inspiration
6. Explain the role of central chemoreceptors in regulation of respiration
7. Explain the role of peripheral chemoreceptors in regulation of respiration
8. Explain the regulation of respiration during exercise
9. Integrate the respiratory regulatory mechanisms
10. Describe the Cheyne-Stokes breathing
Study Resources:
1. Chapter 42, Guyton and Hall Textbook of Medical Physiology, 14th edition
2. Chapter 36, Ganong’s Review of Medical Physiology, 26th edition
3. Chapter 13, Human Physiology by Lauralee Sherwood, 9th edition
Lecture 6 -- Memory 2015.pptlearning occurs when a stimulus (unconditioned st...AyushGadhvi1
learning occurs when a stimulus (unconditioned stimulus) eliciting a response (unconditioned response) • is paired with another stimulus (conditioned stimulus)
Kosmoderma Academy, a leading institution in the field of dermatology and aesthetics, offers comprehensive courses in cosmetology and trichology. Our specialized courses on PRP (Hair), DR+Growth Factor, GFC, and Qr678 are designed to equip practitioners with advanced skills and knowledge to excel in hair restoration and growth treatments.
2. control/clear HIV from already
infected individuals
Therapeutic vaccines aim to
increase the activity of the body’s
natural defenses.
reduce the risk of infection in people
who are not infected with HIV
This process can act rely on
activation of the
adaptive immune system.
There is still no vaccine for HIV
Therapeutic vaccines Prophylactic vaccines
3. Advantages:
Rapid, cost effective proof of concept assessment of efficacy
even in small phase I/II trials and less toxicity of treatment.
It may be worth to develop even if not fully effective, since it
may be used in association with antiretroviral drugs (ART).
Ensoli, Barbara, et al. "Challenges in HIV vaccine research for treatment and prevention." Frontiers in
immunology 5 (2014): 417.
THERAPEUTIC vaccination strategies
4. Human Immunodeficiency Virus (HIV) is a deadly and
incurable illness impacting millions annually.
The progressive depletion and
dysfunction of immune system
in HIV is related to all
components of the immune
system like T cells, B cells, NK
cells and etc.
5. Icosahedral (20 sided), enveloped virus of the lentivirus
subfamily of retroviruses.
Genetic material consists of two viral strands of RNA found in
core surrounded by protein outer coat.
Characteristics of the virus
6. HIV-1
Is found worldwide
Is the main cause of the worldwide pandemic
HIV-2
Is mainly found in West Africa, Mozambique and Angola.
Causes a similar illness to HIV-1
Less efficiently transmissible rarely causing vertical transmission
Less aggressive with slower disease progression
The basic biology of the HIV
7. Group specific antigen (gag)
Is a single gene responsible for the coding of four proteins, p6, p7, p17, and
p24, all related to internal structural or core functions to the virus.
Wang, Binghe. Ed. Nouri Neamati. Vol. 9. John Wiley & Sons, 2011.
8. Polymerase (pol)
gene encodes three main proteins responsible for the reverse transcriptase,
protease, and integrases enzymes.
Wang, Binghe. Ed. Nouri Neamati. Vol. 9. John Wiley & Sons, 2011.
9. Envelope (env)
Encodes for the exterior viral proteins. Making use of a host cell enzyme
Furin, the fusion protein gp160 coded for my env, is cleaved into two smaller
subunits, gp120 and gp41.
10. Transactivator
The purpose of a transactivator is to selectively increase or decrease the rate
of gene expression. The three produced by HIV are transactivator of
transcription (tat), regulator of virion (rev), and viral protein-r (vpr).
Wang, Binghe. Ed. Nouri Neamati. Vol. 9. John Wiley & Sons, 2011.
11. Regulatory factors
Three other miscellaneous regulatory factors are also present within HIV, viral
infectivity factor (vif), negative regulatory factor (nef), and viral protein-u
(vpu)
Wang, Binghe. Ed. Nouri Neamati. Vol. 9. John Wiley & Sons, 2011.
12. Red Queen hypothesis
Mutability escape the immune system
rapidly evolve drug resistance
circumvent vaccination strategies
Error-prone viral replication
APOBEC3 cytidine deaminases (G>A hypermutation)
How is HIV different from other viruses?
13. Bette T. Korber et al. J. Virol. 2009;83:8300-8314
Conserved & immunogenic sequences
Vulnerable “Achilles heel” regions!
14. If CCR5 is not
expressed on their
surface, HIV infects
them with lower
efficiency.
SB-728 for HIV/AIDS
Sangamo BioSciences (Richmond, CA, USA)
copy
15. S P Indicating sulfate and phosphate moieties
Showing palmitoylation of C moieties
DRYLAVVH sequence
Mutation in this area reduces ligand
binding and severely affects the
functional response of the receptor.
CCR5 protein structure
Mulherin,StephanieA.,etal.Aids17.3(2003):377-387.
16. An ex vivo gene therapy approach by which CD4+ T cells drawn from
HIV- infected patients are modified ex vivo to disrupt the CCR5 gene in
autologous CD4+ T cells, expanded, and reinfused to the patient.
The complexity and costs of this approach, together with serious
safety issues represent a major disadvantage.
Gu, Wan-Gang. Trends in biotechnology 33.3 (2015): 172-179.
17. Dr. Barbara Ensoli, has focused on Tat, a key HIV
regulatory gene and its protein product, Tat, as a
vaccine candidate.
In the absence of Tat, the virus is still infect the cell, however it does not
replicate.
The immunogenic regions of Tat are conserved among the different HIV-
1
Anti-Tat antibodies
Activating
transcription of HIV
Trans-Activator of Transcription
19. Tat Inhibits NKs
HIV Tat was found to be able to inhibit the activities of NKs, especially lowering the
abilities of NK on releasing IFN-gamma and splitting DCs via a direct NK-DC
contact.
Haynes, Barton F., et al. New England Journal of Medicine 366.14 (2014): 1275-1286.
20. In HIV infection individuals, T cell hyperactivation is linked to the exhaustion of T cell
pool in vivo and might promote the progress of disease, which therefore is viewed as a
typical marker for predicting the AIDS progression.
Promots
gene transcription
T cell hyperactivation
Haynes,BartonF.,etal.NewEnglandJournalofMedicine
366.14(2014):1275-1286.
21. Env-specific antibodies would
prevent entry of the virus into
cells. If successful, the vaccine
would provide sterilizing
immunity, which protects the
vaccinated person from
becoming infected with HIV.
Most of the efforts in HIV
vaccine development have
focused on using HIV's
Envelope protein (gp120 or
Env) in vaccines, but the
results have been largely
disappointing.
22. E-gp120 (Abzentek)
Dr. Sudhir Paul introduced the new
concept of electron charging of the
HIV glycoprotein, gp120.
The idea comes from long term survivors (LTS) Lupus patients who can control
HIV infection with no therapeutic agents,
while, usually the virus escapes
the immune system rely on its
mutabilitythus,
The virus is enable to develop
resistance to the BNABs.
23. The linear CD4 binding
site epitope composed of
gp120 residues 421–433
(C-LIN) is vulnerable to
antibodies because of its
mostly conserved.
Karle, Sangeeta, et al. Aids 18.2 (2004): 329-331.
24. Rare innate antibodies that recognize the
native C-LIN conformation with sufficient
specificity and strength neutralize diverse
HIV strains.
Immunogen
BCRs
IgM CSR recognition
Poor
neutralizing!
gp120
IgG
Planque, Stephanie A., et al. AIDS (London, England) 28.15 (2014): 2201.
C-LIN
25. Naturally occurring nucleophilic sites
expressed by the IgM form a peptide
bond that is degraded by an activated
water molecule during the proteolysis
reaction.
The conventional vaccination induce
immature antibodies of the IgM class
that are too large to penetrate the viral
coat and make contact with the c-LIN
region.
Moreover, the virus has developed a
mechanism to suppress the CSR events,
and thus, IgG directred to C-LIN are not
formed.
26. Suhdir Paul suggests:
Nonhydrolyzable polypeptide analogs
containing the strongly electrophilic
phosphonate group (E-gp120)
thus;
bind secreted IgMs and IgM+ BCRs
covalently instead of being
catalytically consumed
then,
class-switched IgGs against C-LIN
which is the irreversible covalent
complexes with gp120 and proceeded
to hydrolyze gp120.
The development of an HIV vaccine is a crucial component required to bring the HIV/AIDS epidemic to an end.
By introducing a part of the virus or an inactive virus into the body, the immune system reacts by producing antibodies. If, years later, the virus enters the organism, these antibodies will recognize and destroy it.
Vif works to interrupt a main human antiviral protein, APOBEC, by targeting it for degradation by the bodies own immune system.
Nef decreases the expression of MHC surface protein signals of the host cell, making it less likely to be marked for degradation by the immune system, and thereby increasing the chances of virion survival.
Vpu is involved in one of the final step of virion production, the budding of the virion from the host cell.
HAART, combination therapy, (Highly Active Anti-Retroviral Therapy) is a customized combination of different classes of medications that a physician prescribes based on such factors as the patient’s viral load (how much virus is in the blood), the particular strain of the virus, the CD4+ cell count, and other considerations (e.g., disease symptoms).
The HIV virus continuously evolves because of the Red Queen hypothesis
44 The high levels of genetic diversity of the HIV-1 virus grant it the ability to escape the immune system, to rapidly evolve drug resistance, and to circumvent vaccination strategies.
44 the expression of host genes may influence the viral mutation rate as is the case of APOBEC3 cytidine deaminases, which can edit the HIV-1 cDNA and produce G-to-A hypermutations .
44 It is also worth mentioning that the high rate of evolution of HIV-1 is not extremely different from that of other RNA viruses such as, for instance, FLUVA or foot-and-mouth disease virus.
++ HIV infection in a single infected individual, as the inaccurate enzymatic machinery of this virus’s replication results in ongoing production of mutant virions.
++ Such an extraordinary degree of genetic diversity
1. an effective HIV vaccine must elicit both mucosal immunity, to contain sexually transmitted virus, and systemic immunity, to contain virus transmitted directly into the bloodstream.
2. HIV is likely transmitted both as cell-free and as cell-associated virus. Therefore, more than a single type of immunity must be elicited by a vaccine if that vaccine is to be effective.
The regions of HIV with the greatest sequence conservation may not be very immunogenic in naturally infected cells. For example, the most conserved regions in the proteome of HIV are found in Pol, but comparatively few CD8+ T-cell responses recognize Pol epitopes spanning these regions
While most regard Gag as conserved and Env as variable, not all regions of Gag aare conserved (only p24 is well conserved throughout), and not all regions of Env are variable.
HIV, like all viruses, can't make new copies of itself without help. It needs to enter cells and use their machinery to reproduce and spread throughout the body.
HIV can only enter certain cells. How does it find the right cells? By special proteins called receptors.
Receptors sit on the outside of cells to receive messages and transmit them into the cell. HIV grabs onto cells that have a receptor called CD4.
It turns out that CD4 isn't enough. Another protein called CCR5 is needed as well. CCR5, called a co-receptor because it works with CD4.
Many people who are resistant to HIV have a mutation in the CCR5 gene called CCR5-delta32. (AR)!
Palmitoylation is the covalent attachment of fatty acids
is generated by zinc finger nuclease (ZFN)-mediated modification that disrupts the expression of this key co-receptor for HIV entry and renders cells resistant to HIV infection.
Finally, Tat is released by acutely infected cells and helps to recruit and activate uninfected cells helping to spread the HIV infection throughout the body.
Regulatory genes, including tat, express proteins soon after infection and are essential for virus replication and pathogenesis.
Proteasomes are protein complexes. The main function of the proteasome is to degrade unneeded or damaged proteins by breaking peptide bonds.
NKs: a lymphocyte able to bind to certain tumour cells and virus-infected cells without the stimulation of antigens, and kill them by the insertion of granules containing perforin.
DCs (Dendritic cells) are the most important antigen presenting cells in vivo.
The detailed molecular mechanism indicates that Tat protein impairs CAMK-II (calcium-calmodulin kinase-II) activation on NKs via regulating the expression of crucial factor, LFA-1, which is responsible for activating CAMK-II. The inhibition of CAMK-II activation leads to the block of calcium influx in NK cells, therefore decreasing the secretion of perforin, granzymes and IFN-γ, eventually reducing the extension of NK/DC contacts.
Tat regulates T cell hyperactivation. Extranuclear Tat activate phosphatidylinositol kinase to make the phosphorylation of complex of NF-κB and IκB, leading to NK-κB translocate into uncleus. Acetylation of NF-κB by P300 starts the activation of NF-κB and promots the gene transcription. In contrast, SIRT1 deacetylates NF-κB and inhibit its activation. Tat acted as the inhibitor of SIRT1 can indirectly improve the acetylation level of NF-κB and activate its function, resulting in T cell hyperactivation.
As an epitope for CD4, there is a linear binding site in gp120 called CLIN which is mostly conserved.
An immunogen is an antigen or any substance that may be specifically bound by components of the immune system (antibody, lymphocytes).
to IgM+ B-cell receptors (BCRs)
Immunogen + BCRs, initiates B-cell antibody responses.
Small CLIN-directed reversibly-binding
Immunoglobulin class switching (CSR), from the isotype IgM to the isotype IgG.
Normally, the IgM forms a nucleophilic peptide bond that it is not very stable and may be hydrolyzed by an activated water molecule.