This document summarizes research into developing an anti-HIV vaccine using nucleoside-modified mRNA encoding envelope proteins. Key points:
- Researchers developed mRNA vaccines optimized for protein expression by incorporating modified nucleosides, UTRs, caps, and tails to generate HIV envelope proteins.
- Mice were primed with intradermal mRNA followed by an intramuscular protein boost to achieve strong T cell and B cell responses.
- The mRNA vaccine induced high levels of IFN-γ, TNF-α, IL-2 in antigen-specific T cells and antibody titers, demonstrating the potential of nucleoside-modified mRNA vaccines for infectious diseases like HIV.
Viral Based Gene Delivery System for Car-t Cell Engineering Creative-Biolabs
A brief introduction about lentiviral vector gene delivery system and its application in CAR-T cell construction. Creative Biolabs offers high quality lentivirus based CAR gene delivery service to help with your CAR-T cell development projects.
Viral Based Gene Delivery System for Car-t Cell Engineering Creative-Biolabs
A brief introduction about lentiviral vector gene delivery system and its application in CAR-T cell construction. Creative Biolabs offers high quality lentivirus based CAR gene delivery service to help with your CAR-T cell development projects.
In this presentation, I talked about the new mRNA vaccine that is authorized for the prevention of coronavirus infection.
mRNA 1273 is developed by Moderna in the US and has shown almost 94% effectiveness
A simple and rapid dna extraction method from FINA nd qPCRManish Thakur
A simple and rapid DNA extraction method from whole blood for highly sensitive detection and quantitation of HIV-1 pro-viral DNA by real-time PCR (Journal of Virological Methods 214 (2015) 37–42 )
This slide is about the basics of mRNA-based therapy. The content includes: definition of mRNA, timeline of mRNA therapeutics, action mechanism and development strategies of mRNA drugs, therapeutic mRNA applications, and the related services provided by Creative Biolabs.
mRNA vaccine is a novel vaccine technology, which delivers mRNA that encoding the antigen protein of pathogen to the cell, and expresses the antigen protein, and then stimulates the immune response of the body.
Creative Biolabs has developed non-replicating mRNA vaccine platform, mRNA vaccine platform, mRNA pharmacology optimization platform, and and Self-amplifying mRNA vaccine platform to spport your vaccine researches. If you need more information about mRNA vaccine, please follow us.
In the past 10 years, there has been tremendous progress made in the field of gene therapy. Effective
treatments of Leber congenital amaurosis, hemophilia, and spinal muscular atrophy have been largely based on
the efficiency and safety of adeno-associated vectors. Myocardial gene therapy has been tested in patients with
heart failure using adeno-associated vectors with no safety concerns but lacking clinical improvements. Cardiac
gene therapy is adapting to the new developments in vectors, delivery systems, targets, and clinical end points and
is poised for success in the near future
El ARN del SARS-CoV-2 de transcripción inversa puede integrarse en el genoma de células humanas cultivadas y puede ser expresado en tejidos derivados del paciente
Proceedings of National Academy of SciencesPNAS is a partner of CHORUS, COPE, CrossRef, ORCID, and Research4Life.
Unlocking the Potential of mRNA Vaccines and TherapeuticsMerck Life Sciences
Watch the presentation of this webinar here: https://bit.ly/3lNmkf7
The therapeutic potential of mRNA has been studied for decades and this exciting modality could potentially disrupt the biological market, in particular vaccine and novel therapies. This webinar will highlight the potential of mRNA therapies and focus on the manufacturing process's associated challenges, solutions and perspectives from synthesis to delivery.
mRNA has emerged as a promising modality for a wide range of therapeutics and vaccines and could become the break-through technology of this century. mRNA-based platform technologies could enable a more rapid response to infectious diseases, outbreaks or pandemics and allow efficient gene replacements or cancer treatments. mRNA represents a safer alternative to DNA-based therapies and the technology has recently advanced to overcome stability and efficacy challenges. Because of that, the industrialization of this technology is just in its infancy stages and bottlenecks exist around scalability, purity, and delivery which are key to establish and deliver the promise of such platform. This webinar will shed light on the potential of mRNA therapies and focus on the manufacturing process's associated challenges, solutions and perspectives from synthesis to delivery.
In this webinar, you will learn:
• The potential behind using mRNA as a therapeutic and vaccine
• The mRNA production process
• The challenges around mRNA production
• The solutions and perspectives for a robust manufacturing process
• mRNA delivery systems and their manufacturing
Suicide gene therapy is based on the delivery of a gene encoding a cytotoxic protein into tumor cells.
For this, there are two possible strategies:
1. Indirect gene therapy using enzyme-activated pro-drug, which allows the conversion of a pro-drug into a lethal drug into cells.
2. Direct gene therapy using a toxin gene, whose expression can change the stability of the cell membrane and reduce the viability of tumor cells, or correct mutated pro-apoptotic genes, generally tumor suppressor genes that in normal condition induce cell suicide.
International Proficiency Study of a Consensus L1 PCR Assay for the Detection...Alberto Cuadrado
The PGMY L1 consensus primer pair combined with the line blot assay allows the detection of 27 genital
human papillomavirus (HPV) genotypes. We conducted an intralaboratory and interlaboratory agreement
study to assess the accuracy and reproducibility of PCR for HPV DNA detection and typing using the PGMY
primers and typing amplicons with the line blot (PGMY-LB) assay. A test panel of 109 samples consisting of
29 HPV-negative (10 buffer controls and 19 genital samples) and 80 HPV-positive samples (60 genital samples
and 20 controls with small or large amounts of HPV DNA plasmids) were tested blindly in triplicate by three
laboratories. Intralaboratory agreement ranged from 86 to 98% for HPV DNA detection. PGMY-LB assay
results for samples with a low copy number of HPV DNA were less reproducible. The rate of intralaboratory
agreement excluding negative results for HPV typing ranged from 78 to 96%. Interlaboratory reliability for
HPV DNA positivity and HPV typing was very good, with levels of agreement of >95% and kappa values of
>0.87. Again, low-copy-number samples were more prone to generating discrepant results. The accuracy varied
from 91 to 100% for HPV DNA positivity and from 90 to 100% for HPV typing. HPV testing can thus be
accomplished reliably with PCR by using a standardized written protocol and quality-controlled reagents. The
use of validated HPV DNA detection and typing assays demonstrating excellent interlaboratory agreement will
allow investigators to better compare results between epidemiological studies.
In this presentation, I talked about the new mRNA vaccine that is authorized for the prevention of coronavirus infection.
mRNA 1273 is developed by Moderna in the US and has shown almost 94% effectiveness
A simple and rapid dna extraction method from FINA nd qPCRManish Thakur
A simple and rapid DNA extraction method from whole blood for highly sensitive detection and quantitation of HIV-1 pro-viral DNA by real-time PCR (Journal of Virological Methods 214 (2015) 37–42 )
This slide is about the basics of mRNA-based therapy. The content includes: definition of mRNA, timeline of mRNA therapeutics, action mechanism and development strategies of mRNA drugs, therapeutic mRNA applications, and the related services provided by Creative Biolabs.
mRNA vaccine is a novel vaccine technology, which delivers mRNA that encoding the antigen protein of pathogen to the cell, and expresses the antigen protein, and then stimulates the immune response of the body.
Creative Biolabs has developed non-replicating mRNA vaccine platform, mRNA vaccine platform, mRNA pharmacology optimization platform, and and Self-amplifying mRNA vaccine platform to spport your vaccine researches. If you need more information about mRNA vaccine, please follow us.
In the past 10 years, there has been tremendous progress made in the field of gene therapy. Effective
treatments of Leber congenital amaurosis, hemophilia, and spinal muscular atrophy have been largely based on
the efficiency and safety of adeno-associated vectors. Myocardial gene therapy has been tested in patients with
heart failure using adeno-associated vectors with no safety concerns but lacking clinical improvements. Cardiac
gene therapy is adapting to the new developments in vectors, delivery systems, targets, and clinical end points and
is poised for success in the near future
El ARN del SARS-CoV-2 de transcripción inversa puede integrarse en el genoma de células humanas cultivadas y puede ser expresado en tejidos derivados del paciente
Proceedings of National Academy of SciencesPNAS is a partner of CHORUS, COPE, CrossRef, ORCID, and Research4Life.
Unlocking the Potential of mRNA Vaccines and TherapeuticsMerck Life Sciences
Watch the presentation of this webinar here: https://bit.ly/3lNmkf7
The therapeutic potential of mRNA has been studied for decades and this exciting modality could potentially disrupt the biological market, in particular vaccine and novel therapies. This webinar will highlight the potential of mRNA therapies and focus on the manufacturing process's associated challenges, solutions and perspectives from synthesis to delivery.
mRNA has emerged as a promising modality for a wide range of therapeutics and vaccines and could become the break-through technology of this century. mRNA-based platform technologies could enable a more rapid response to infectious diseases, outbreaks or pandemics and allow efficient gene replacements or cancer treatments. mRNA represents a safer alternative to DNA-based therapies and the technology has recently advanced to overcome stability and efficacy challenges. Because of that, the industrialization of this technology is just in its infancy stages and bottlenecks exist around scalability, purity, and delivery which are key to establish and deliver the promise of such platform. This webinar will shed light on the potential of mRNA therapies and focus on the manufacturing process's associated challenges, solutions and perspectives from synthesis to delivery.
In this webinar, you will learn:
• The potential behind using mRNA as a therapeutic and vaccine
• The mRNA production process
• The challenges around mRNA production
• The solutions and perspectives for a robust manufacturing process
• mRNA delivery systems and their manufacturing
Suicide gene therapy is based on the delivery of a gene encoding a cytotoxic protein into tumor cells.
For this, there are two possible strategies:
1. Indirect gene therapy using enzyme-activated pro-drug, which allows the conversion of a pro-drug into a lethal drug into cells.
2. Direct gene therapy using a toxin gene, whose expression can change the stability of the cell membrane and reduce the viability of tumor cells, or correct mutated pro-apoptotic genes, generally tumor suppressor genes that in normal condition induce cell suicide.
International Proficiency Study of a Consensus L1 PCR Assay for the Detection...Alberto Cuadrado
The PGMY L1 consensus primer pair combined with the line blot assay allows the detection of 27 genital
human papillomavirus (HPV) genotypes. We conducted an intralaboratory and interlaboratory agreement
study to assess the accuracy and reproducibility of PCR for HPV DNA detection and typing using the PGMY
primers and typing amplicons with the line blot (PGMY-LB) assay. A test panel of 109 samples consisting of
29 HPV-negative (10 buffer controls and 19 genital samples) and 80 HPV-positive samples (60 genital samples
and 20 controls with small or large amounts of HPV DNA plasmids) were tested blindly in triplicate by three
laboratories. Intralaboratory agreement ranged from 86 to 98% for HPV DNA detection. PGMY-LB assay
results for samples with a low copy number of HPV DNA were less reproducible. The rate of intralaboratory
agreement excluding negative results for HPV typing ranged from 78 to 96%. Interlaboratory reliability for
HPV DNA positivity and HPV typing was very good, with levels of agreement of >95% and kappa values of
>0.87. Again, low-copy-number samples were more prone to generating discrepant results. The accuracy varied
from 91 to 100% for HPV DNA positivity and from 90 to 100% for HPV typing. HPV testing can thus be
accomplished reliably with PCR by using a standardized written protocol and quality-controlled reagents. The
use of validated HPV DNA detection and typing assays demonstrating excellent interlaboratory agreement will
allow investigators to better compare results between epidemiological studies.
The 'omics' revolution: How will it improve our understanding of infections a...WAidid
This slideset explains the ‘Omics’ technology and its role in the study of infections and vaccination. It is a revolution as it offers powerful tools to interrogate the animal / human immune response to vaccines and infections.
Genotyping of 27 Human Papillomavirus Types by Using L1 Consensus PCR Product...Alberto Cuadrado
Amplification of human papillomavirus (HPV) DNA by L1 consensus primer systems (e.g., MY09/11 or
GP51/61) can detect as few as 10 to 100 molecules of HPV targets from a genital sample. However, genotype
determination by dot blot hybridization is laborious and requires at least 27 separate hybridizations for
substantive HPV-type discrimination. A reverse blot method was developed which employs a biotin-labeled
PCR product hybridized to an array of immobilized oligonucleotide probes. By the reverse blot strip analysis,
genotype discrimination of multiple HPV types can be accomplished in a single hybridization and wash cycle.
Twenty-seven HPV probe mixes, two control probe concentrations, and a single reference line were immobilized
to 75- by 6-mm nylon strips. Each individual probe line contained a mixture of two bovine serum albuminconjugated
oligonucleotide probes specific to a unique HPV genotype. The genotype spectrum discriminated on
this strip includes the high-risk, or cancer-associated, HPV genotypes 16, 18, 26, 31, 33, 35, 39, 45, 51, 52, 55,
56, 58, 59, 68 (ME180), MM4 (W13B), MM7 (P291), and MM9 (P238A) and the low-risk, or non-cancerassociated,
genotypes 6, 11, 40, 42, 53, 54, 57, 66, and MM8 (P155). In addition, two concentrations of b-globin
probes allowed for assessment of individual specimen adequacy following amplification. We have evaluated the
performance of the strip method relative to that of a previously reported dot blot format (H. M. Bauer et al.,
p. 132–152, in C. S. Herrington and J. O. D. McGee (ed.), Diagnostic Molecular Pathology: a Practical Approach,
(1992), by testing 328 cervical swab samples collected in Digene specimen transport medium (Digene Diagnostics,
Silver Spring, Md.). We show excellent agreement between the two detection formats, with 92%
concordance for HPV positivity (kappa 5 0.78, P < 0.001). Nearly all of the discrepant HPV-positive samples
resulted from weak signals and can be attributed to sampling error from specimens with low concentrations
(<1 copy/ml) of HPV DNA. The primary advantage of the strip-based detection system is the ability to rapidly
genotype HPVs present in genital samples with high sensitivity and specificity, minimizing the likelihood of
misclassification.
IntegrateRNA provides custom mRNA synthesis and modification service by in vitro transcription and chemical synthesis. https://integraterna.creative-biogene.com/service/mrna-services.html
Identification of antibiotic resistance genes in Klebsiella pneumoniae isolat...QIAGEN
Antibiotic resistant strains of pathogenic bacteria are a growing worldwide health problem. To effectively combat the spread of difficult-to-treat bacterial infections, rapid surveillance methods for detection of antibiotic resistance genes is required to monitor both bacterial isolates and metagenomic samples. Additionally, identification of potential new sources for different antibiotic resistance genes is critical. Both of these goals require tools that can be used for profiling of antibiotic resistance genes from various types of samples. Real-time PCR has proven to be effective for the detection of antibiotic resistance genes. Using PCR array technology, simultaneous detection of 87 prevalent and important antibiotic resistance genes is possible and should prove to be an effective method for antibiotic resistance monitoring. This allows for a more comprehensive profiling of antibiotic resistance genes than is possible using individual PCR assays.
Antiretroviral Resistance in HIV-1 Patients at a Tertiary Medical Institute in Saudi Arabia: a Retrospective Study and Analysis.
Journal Club,
Virology Rotation , 1/5/2019
COMPUTER AIDED PERSPECTIVE OF SELECTION OF PLANTS AGAINST VIRUSESManik Ghosh
Discovery of drugs against viruses is always an attractive area of research. Plants are important natural source for discovery of drugs against viruses. Here in this article we targeted at two points. First the selection of a particular plant against viruses can be done more rationally by using the latest computer techniques i.e. docking studies of the known phytochemicals on various viral protein targets. Second with help of literature search and docking studies we identified some important natural compounds that can be used as natural leads. For this, we selected important phytoconstituents from 20 plants for docking studies using Maestro (Glide) and Lead IT (FlexX). Later those phytochemicals which got good docking scores were further docked in Autodock 4.2 in order to find out the estimated inhibition constant. Flavonoids, curcumin and other compounds gave good docking scores and better inhibition constant. These compounds can be used as natural leads and analogues and derivatives can be synthesized to get effective antiviral agents. In addition this approach gives a way to avoid random selection of plant for a particular activity, in order to save time, chemicals and effort of the medicinal chemist.
I reviewed several manuscripts, books, grants and project proposals. This is one of the paper I reviewed recently published in Plant Biotechnology Journal
Gene expression profile of the tumor microenvironment from 40 NSCLC FFPE and ...Thermo Fisher Scientific
The tumor microenvironment (TME) is the intersection between tumor cells and
surrounding non-transformed cells. It contains immune cells, signaling molecules,
stromal and extracellular matrix. Research has shown the TME is often associated
with tumor growth. However, the function and regulatory mechanism of each
constituent is still poorly understood. The presence of PD-L1 is a promising marker
to predict positive response for T cell checkpoint therapy. Current IHC methods to
measure PD-L1 are subjective and highly variable. A higher-throughput and
standardized method that can systematically measure gene expression of cells
present in the TME has emerged to be a more desirable solution.
We applied the OncomineTM Immune Response Research Assay to measure the
expression of 395 genes in non-small cell lung cancer (NSCLC) research samples
from 40 matched FFPE and fresh frozen sample types. This assay covers genes
involved in checkpoint pathway, T cell regulation, cytokine and interferon signaling
pathways, and markers of different tumor infiltrating lymphocyte (TIL) subsets, as
well as tumor markers. With an input requirement of 10 ng of total RNA, libraries
were generated, templated on the Ion ChefTM and sequenced on the Ion S5TM
System. Sequencing data was analyzed and mapped with Torrent Suite Software
and differential expression analysis was conducted with AffymetrixTM Transcriptome
Analysis Console.
T cell recall response of two hypothetical proteins (Rv2251 and Rv2721c) from...Santhi Devasundaram
The demonstrated variable efficacy of the only licensed TB vaccine Mycobacterium
bovis bacillus CalmetteeGue´rin (M. bovis BCG) encourages the need for new vaccine candidates
against TB. Antigen specific cellular immune response is often considered imperative
during Mycobacterium tuberculosis (M. tuberculosis) infection and antigens that are strongly
associated with the latent phase of infection are drawing increasing attention for anti-TB vaccine
development. Here, we investigated the phenotypic and functional profiles of two novel
mycobacterial antigens Rv2251 and Rv2721c during T cell recall response via multi-color flow
cytometry.
1. P41.25
Generating an Anti-HIV Vaccine Using Nucleoside-
modified mRNA Encoding Envelope
Norbert Pardi, Katalin Kariko, Michael Hogan, Hiromi Mur-
amatsu, James A. Hoxie, Drew Weissman
University of Pennsylvania, Department of Medicine, Phila-
delphia, PA, United States
Background: There has been great progress in understanding
the detailed molecular mechanisms of HIV-1 infection but no
effective vaccine has been developed to date. mRNA has
emerged as a very promising new therapeutic agent in recent
years and has already shown progress as an effective method for
generating potent vaccines.
Methods: To create a vaccine with maximal potency, in vitro
transcribed mRNAs were optimized for higher levels and ex-
tended translation by incorporation of selected UTRs, modified
nucleosides, 5¢ cap, 3¢ poly(A)-tail, and other modifications and
were HPLC-purified. To achieve both strong T cell and B cell
responses, heterologous mRNA prime - protein boost vacci-
nation regimens were used. For priming, naked mRNA en-
coding HIV envelope gp160 was administered intradermally
into mice. Cell surface Env was used to increase exposure of
neutralizing epitopes. Four weeks after the second mRNA
prime, Env protein was injected intramuscularly as a boost. As
nucleoside modified mRNA does not activate RNA sensors, to
increase the robustness of the immune response, a series of
adjuvant molecules and encoding mRNAs were co-injected
along with the antigen-encoding mRNA. Flow cytometry and
ELISA were used to evaluate T cell and B cell responses, re-
spectively.
Results: Elevated levels of IFN-v, TNF-a and IL-2 in antigen-
specific CD4+
and CD8+
T cells and high gp120 antibody titers
could be measured following two rounds of mRNA prime -
protein boost vaccination.
Conclusions: Our results demonstrate that antigen-encoding
nucleoside modified mRNA induces effective HIV-specific im-
mune responses and has great potential for vaccination against
infectious diseases.
P41.26
Comparative Neutralization Sensitivity of Indian
and South African HIV-1 Clade C Viruses to Plasma
Antibodies from Chronically Infected Indian Donors
Shilpa Patil1
, Sharda Gadhe2
, Swapnil Sonawane2
, Manish
Bansal1
, Suprit Deshpande1
, Tandile Hermanus3
, Lynn Morris3
,
K G Murugavel4
, Suniti Solomon4
, Seema Sahay2
, Ramesh
Paranjape2
, Bimal K. Chakrabarti1
, Jayanta Bhattacharya1
1
HIV Vaccine Translational Research Laboratory, THSTI-
IAVI HIV Vaccine Design Program, Gurgaon, India, 2
Na-
tional AIDS Research Institute, Pune, India, 3
National Institute
for Communicable Diseases, Johannesburg, South Africa,
4
Y.R. Gaitonde Centre for AIDS Research and Education,
Chennai, India
Background: HIV-1 clade C is the major subtype circulating in
India and South Africa. The present study was undertaken to
examine the extent of neutralization sensitivity of Indian and
South African (SA) HIV-1 clade C viruses to plasma antibodies
obtained from anti-retroviral naı¨ve chronically infected HIV-1
positive Indian patients.
Methods: Plasma samples from 150 anti retroviral naı¨ve donors
from India chronically infected with HIV-1 were assessed for
their degree of neutralization of 9 Indian and 10 South African
HIV-1 clade C envelopes using a TZM-bl reporter cell assay.
Reagents were shared between Indian and SA laboratories for
quality assessment. Antibody specificities were determined by
using TriMut core protein, mutant and chimeric viruses.
Results: 27/150 (18%) plasma samples were found to neutral-
ize > 50% of the panel viruses at 1:100 dilution. Amongst these,
seven were found (4.66%) displayed maximum breadth and
potency with median ID50s ranging from 300–750. The BCN
plasma antibodies were found to neutralize Indian (57%) viruses
slightly better than SA (43%) viruses. None of the potent broadly
cross neutralizing BCN plasmas was found to show neutralizing
antibody specificities targeting theCD4 binding site. However,
two of them showed N332 residuedependence in V3 loop in both
Indian and SA clade C Env backbones. While 3/7 BCN plasma
antibodies showed clade C MPER (HIV-2/HIV1 7312-C1C)
dependence, they did not show specificity to epitopes targeted by
known MPER directed monoclonal antibodies.
Conclusions: Our data suggest the presence of common epi-
topes in Indian and South African HIV-1 clade C envelopesas
most of the BCN plasma antibodies cross-neutralized pseudo-
typed viruses expressing clade C envelopes from both the
countries. Identification of epitopes common in both in Indian
and SA clade C envelopes will help define strategies to design
vaccine that would be effective in both countries.
P41.27
Cell-surface Display and Panning of HIV-1 Derived
Envelope Proteins
Tim-Henrik Bruun, Veronika Schmid, Alexander Kliche, Ralf
Wagner
University of Regensburg, Institute of Medical Microbiology
and Hygiene, Molecular Microbiology and Gene Therapy Unit,
Regensburg, Germany
Background: Available display systems allow the screening of
millions of candidate proteins and are the method of choice to
identify optimized antigen-antibody binding.
We established a mammalian cell-surface display to present
HIV-1 envelope derivatives in a natural, trimeric and membrane
bound environment. This allows us to generate affinity enhanced
envelope derivatives against broadly neutralizing antibodies
(bNAbs) in order to select potent Envelope (Env) based vaccine
candidates.
Methods: An HIV-1 derived lentiviral vector was developed to
infect HEK293T cells at a low multiplicity of infection (MOI),
in order to correlate phenotype and genotype. The vector was
designed and proven to express both GFP and Env in a constant
relationship, enabling indirect normalization for Env expression
by detecting GFP. After staining with an appropriate bNAb,
Env-displaying cells were selected for high affinity binding via
FACS-Sorting.
To adapt this system to the use of very large libraries, a refined
vector system was developed, allowing the stable genomic in-
tegration of both ENV and GFP at a distinct integration site. This
ensures that only one envelope variant is expressed per cell,
efficiently linking phenotype and genotype. Due to the stringent
linkage of ENV and GFP, GFP expression can again be used as a
means to normalize for Env expression in the FACS-Sorting
process.
A249