This document discusses concepts related to species evolution and taxonomy, including:
- Speciation occurs through anagenesis (phyletic evolution) and cladogenesis (branching evolution).
- A species is defined based on morphology, genetics, and behavioral differences from other species.
- A subspecies is a geographical variety that differs in morphological characteristics from other populations of the same species.
- Taxonomic classification seeks to group organisms based on evolutionary relationships and shared ancestry.
Organisms are classified into a hierarchical classification that groups closely related individuals.
The species is the basic biological unit around which classifications are based.
Iczn(The International Commission on Zoological Nomenclature )Al Nahian Avro
The International Commission on Zoological Nomenclature (ICZN) acts as adviser and arbiter for the zoological community by generating and disseminating information on the correct use of the scientific names of animals. The ICZN is responsible for producing the International Code of Zoological Nomenclature - a set of rules for the naming of animals and the resolution of nomenclatural problems.
presentation contain different type of interactions, competition-intra and inter-specific, mechanism of competition-Exploitation and Interference, Mathematical models of Competition i.e. Hutchinson Ratio, Exponential Growth, Logistic Model, Lotka-Volterra Competition Model, Tilman's Resource Model, Results of Competition i.e. Range restriction, Competitive Displacement, Competitive Exclusion , Competitive Displacement Hypothesis, Ecological Niche, Evolution of new species, Factors Affecting Competition, Case studies
The process of defining a species isn't as straight forward as most people would think. Classifying organisms into species is completely a human concept and nature doesn't always like to play by our rules.
http://www.basicbiology.net/biology/taxonomy/speciation.php
Organisms are classified into a hierarchical classification that groups closely related individuals.
The species is the basic biological unit around which classifications are based.
Iczn(The International Commission on Zoological Nomenclature )Al Nahian Avro
The International Commission on Zoological Nomenclature (ICZN) acts as adviser and arbiter for the zoological community by generating and disseminating information on the correct use of the scientific names of animals. The ICZN is responsible for producing the International Code of Zoological Nomenclature - a set of rules for the naming of animals and the resolution of nomenclatural problems.
presentation contain different type of interactions, competition-intra and inter-specific, mechanism of competition-Exploitation and Interference, Mathematical models of Competition i.e. Hutchinson Ratio, Exponential Growth, Logistic Model, Lotka-Volterra Competition Model, Tilman's Resource Model, Results of Competition i.e. Range restriction, Competitive Displacement, Competitive Exclusion , Competitive Displacement Hypothesis, Ecological Niche, Evolution of new species, Factors Affecting Competition, Case studies
The process of defining a species isn't as straight forward as most people would think. Classifying organisms into species is completely a human concept and nature doesn't always like to play by our rules.
http://www.basicbiology.net/biology/taxonomy/speciation.php
The topic of Discussion is the Process of Classification, Identification & Nomenclature of an organism based upon their similarities and placing them under a common taxa. The rules of Nomenclature and Taxonomy.
Blister beetles have wide range of ecological value. Due to their unique biology and relationship with other insects, they have been studied from various aspects. Agronomists study to explore information on crop infestation and ecologists study parasitoid nature of larva.
This file gives an insight on soil life. Soil biodiversity has greater importance in ecosystem. Climate and related change has hugely affected soil life in recent decades. The first and foremost impact of climate change always appears on soil.
THE IMPORTANCE OF MARTIAN ATMOSPHERE SAMPLE RETURN.Sérgio Sacani
The return of a sample of near-surface atmosphere from Mars would facilitate answers to several first-order science questions surrounding the formation and evolution of the planet. One of the important aspects of terrestrial planet formation in general is the role that primary atmospheres played in influencing the chemistry and structure of the planets and their antecedents. Studies of the martian atmosphere can be used to investigate the role of a primary atmosphere in its history. Atmosphere samples would also inform our understanding of the near-surface chemistry of the planet, and ultimately the prospects for life. High-precision isotopic analyses of constituent gases are needed to address these questions, requiring that the analyses are made on returned samples rather than in situ.
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
What is greenhouse gasses and how many gasses are there to affect the Earth.moosaasad1975
What are greenhouse gasses how they affect the earth and its environment what is the future of the environment and earth how the weather and the climate effects.
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
2. Species Evolution (sub-species concept)
• Evolutionary theory must explain macroevolution, the origin of new
taxonomic groups
• Speciation, or the origin of new species, is central to macroevolution
since all higher taxa originate with a new species which is novel
enough to be the first member
• Fossil record provides evidence for two patterns of speciation:
• Anagenesis (phyletic evolution) – transformation of an unbranched lineage of
organisms to a different state (the new species)
• Cladogenesis (branching evolution) – budding of one or more species from a
parent species that continues to exist
4. What is Species?
• Species = Latin for “kind” or “appearance”
• Linnaeus described species in terms of their morphology
• Modern taxonomists also consider genetic makeup and
functional and behavioural differences when describing
species
5. What is sub-species?
• The term subspecies refers to a unity of populations of a
species living in a subdivision of the species' global range and varies
from other populations of the same species by morphological
characteristics (Mayr, E. 1982, Monroe, B.L. 1982).
• The term is abbreviated subsp. in botany or ssp. in zoology
The plural is the same as the singular: subspecies.
• In zoology, under the International Code of Zoological Nomenclature ,
the subspecies is the only taxonomic rank below that of species that
can receive a name.
6. African leopard (Panthera pardus
pardus), the
nominotypical leopard subspecies
native to Africa
Sumatran tiger (P. tigris sondaica), a tiger subspecies
native to the Sunda islands
7. • While the scientific name of a species is a binomen, the scientific name
of a subspecies is a trinomen - a binomen followed by a subspecific
name. A tiger's binomen is Panthera tigris, so for a Sumatran tiger the
trinomen is, for example, Panthera tigris sumatrae. Subspecies is
generally abbreviated as "ssp." in zoology, but is not used in scientific
name.
• In zoological nomenclature, when a species is split into subspecies, the
originally described population is retained as the "nominotypical
subspecies“ (ICZN Art. 47) or "nominate subspecies", which repeats the
same name as the species. For example, Motacilla alba alba (often
abbreviated M. a. alba) is the nominotypical subspecies of the white
wagtail (Motacilla alba).
9. Monotypic and Polytypic species
• In biological terms, rather than in relation to nomenclature,
a polytypic species has two or more genetically and phenotypically
divergent subspecies, races, or more generally
speaking, populations that differ from each other so that a separate
description is warranted (Mayr, E., 1970). These distinct groups do not
interbreed as they are isolated from another, but which can
interbreed and have fertile offspring, e.g. in captivity. Example:
Sparrows
• In a monotypic species, all populations exhibit the same genetic and
phenotypical characteristics. Example: Indian One Horned Rhinoceros
10. Phenotypic Plasticity
• Phenotypic plasticity refers to some of the changes in an organism's
behavior, morphology and physiology in response to a unique
environment (Price, T.D., Qvarnström, A., and Irwin, D.E., 2003).
• Phenotypic plasticity encompasses all types of environmentally
induced changes (e.g. morphological, physiological, behavioral,
phenological) that may or may not be permanent throughout an
individual's lifespan.
• Generally, phenotypic plasticity is more important for immobile
organisms (e.g. plants) than mobile organisms (e.g. most animals), as
mobile organisms can often move away from unfavorable
environments (Schlichting, C.D., 1986).
11. • Polyphenism: The special case when differences in environment
induce discrete phenotypes.
• Phenotypic plasticity is the ability of one genotype to produce more
than one phenotype when exposed to different environments.
• Phenotypic plasticity has been taken as important part of ecosystem
when environmental change happens over relatively short periods of
time.
• Example: Specklewood Butterflies have two morphs-one with three
dots in hindwing and other with two dots. The existence of these
subspecies is due to variation in morphology down a gradient
corresponding to a geographic cline. The males of this species exhibit
two types of mate locating behaviors: territorial defense and
patrolling.
12.
13. Factors
• Temperature: Ectothermic animals respond to change in their thermal
environment.
• Geography: altitudinal variations alter seasonal changes, photoperiods and
surrounding bio-diversity which in turn cause phenotypic plasticity various
species.
• Inter-relation with other organisms: example-parasitism. House mice
infected with intestinal nematodes experience decreased rates of glucose
transport in the intestine. To compensate for this, mice increase the total
mass of mucosal cells, cells responsible for glucose transport, in the
intestine. This allows infected mice to maintain the same capacity
for glucose uptake and body size as uninfected mice.
• Nutrition: animals must process a greater total volume of poor-quality food
to extract the same amount of energy as they would from a high-quality
diet. Many species respond to poor quality diets by increasing their food
intake, enlarging digestive organs, and increasing the capacity of the
digestive tract. Example: Mongolian Gerbils etc.
14. Significance
• Relation with Evolution: Plasticity is usually thought to be an evolutionary
adaptation to environmental variation that is reasonably predictable and occurs
within the lifespan of an individual organism, as it allows individuals to 'fit' their
phenotype to different environments (Gabriel, W. 2005 and Garland, T. and Kelly,
S.A. 2006). In the presence of a predator, bluegill sunfish, the freshwater snails
make their shell shape more rotund and reduce growth. This makes them more
crush-resistant and better protected from predation.
• Relation with Climate Change: Phenotypic plasticity is a key mechanism with
which organisms can cope with a changing climate, as it allows individuals to
respond to change within their lifetime (Williams et.al., 2006). The North
American red squirrel (Tamiasciurus hudsonicus) has experienced an increase in
average temperature over this last decade of almost 2 °C. This increase in
temperature has caused an increase in abundance of white spruce cones, the
main food source for winter and spring reproduction. In response, the mean
lifetime parturition (delivery) date of this species has advanced by 18 days.
15.
16. The Genus Concept
• In the hierarchy of biological classification, genus comes above species and
below family. In binomial nomenclature, the genus name forms the first
part of the binomial species name for each species within the genus.
• The standards for genus classification are not strictly codified, so different
authorities often produce different classifications for genera. There are
some general practices used, however, including the idea that a newly
defined genus should fulfill these three criteria to be descriptively useful:
• Monophyly: phylogenetic analysis should clearly demonstrate both monophyly and
validity as a separate lineage
• Distinctness: genetic distinctness
• Reasonable Compactness
(Sigward, J. D., Sutton, M. D., Bennett, K. D. 2018)
17. • The term "genus" comes from the Latin genus (origin, type, group,
race). Linnaeus popularized its use in his 1753 Species Plantarum.
• The gray wolf's scientific name is Canis lupus, with Canis (Lat. "dog")
being the generic name shared by the wolf's close relatives
and lupus (Lat. "wolf") being the specific name particular to the wolf. A
botanical example would be Hibiscus arnottianus, a particular species
of the genus Hibiscus native to Hawaii.
• In zoological usage, taxonomic names, including those of genera, are
classified as "available" or "unavailable". Available names are those
published in accordance with the International Code of Zoological
Nomenclature and not otherwise suppressed by subsequent decisions
of the International Commission on Zoological Nomenclature (ICZN);
the earliest such name for any taxon (for example, a genus) should
then be selected as the "valid" (i.e., current or accepted) name for the
taxon in question.
18. • Homonyms: Within the same kingdom, one generic name can apply to
one genus only. However, many names have been assigned (usually
unintentionally) to two or more different genera. For example,
the platypus belongs to the genus Ornithorhynchus although George
Shaw named it Platypus in 1799 (these two names are thus synonyms).
However, the name Platypus had already been given to a group
of ambrosia beetles by Johann Friedrich Wilhelm Herbst in 1793. A
name that means two different things is a homonym. Since beetles and
platypuses are both members of the kingdom Animalia, the name
could not be used for both. Johann Friedrich Blumenbach published
the replacement name Ornithorhynchus in 1800.
• Aotus is the generic name of both golden peas and night monkeys.
19. • Genus size: The number of species in genera varies considerably
among taxonomic groups. For instance, among (non-avian) reptiles,
which have about 1180 genera, the most (>300) have only 1 species,
~360 have between 2 and 4 species, 260 have 5-10 species, ~200
have 11-50 species, and only 27 genera have more than 50
species. However, some insect genera such as the bee
genera Lasioglossum and Andrena have over 1000 species each.
• Accepted genera: approximately 510,000 as at end 2016, increasing at
some 2,500 per year (Rees, T. at.al. 2017).
20. Taxonomic Keys
• A taxonomic key is a device, which when properly constructed and used,
enables a user to identify an organism. Keys are devices consisting of a
series of contrasting or contradictory statements or propositions requiring
the identifier to make comparisons and decisions based on statements in
the key as related to the material to be identified.
• There are two types of keys: (a) Dichotomous and (b) Poly clave (also
called Multiple Access or Synoptic)
• Dichotomous keys allow the user to determine the identity of items using
a sequence of alternative choices. Dichotomous keys always give two,
mutually exclusive choices in parallel statements. The pair of statements is
referred to as a couplet and each 1/2 of a couplet is a lead. At each couplet
of a dichotomous key the user is presented with two choices about a
specific character present in the group of organisms, a specific character
state is described for each lead. Sometimes the characters
are quantitative (i.e., measurements) and sometimes the characters
are qualitative (e.g., texture).
21. • Polyclave Keys are tools used to help identify unknown objects or species.
The keys are generated using interactive computer programs. Polyclave
keys use a process of elimination. The user is presented with a series of
choices that describe features of the species they wish to identify. The user
then checks off a list of character states present in the organism they wish
to study. The program looks to match those character states with all the
species they can possibly match. If a species does not have that character
state it is eliminated from the list. The more character states listed the
more species that are eliminated. This allows the rapid elimination of large
numbers of species that the specimen cannot be. The process continues
until only one species (or a short list of species) remains. This allows the
user to eliminate lots of potential species and identify the species or at
least a short list of possible species. This continues until only one species is
left. If all went well, and the key fits your group of organisms, that is the
name of the species you have located. Even the best keys have their
limitations, so make sure you verify your identification using multiple tools
(image verification, herbarium specimens, expert identification, etc.).
22. Polyclave way of Identification Dichotomous way of Identification
23. Evolutionary Systematics
• Evolutionary systematics or Darwinian classification is a branch of biological
classification that seeks to classify organisms using a combination
of phylogenetic relationship (shared descent), progenitor-descendant relationship
(serial descent), and degree of evolutionary change.
• This type of taxonomy may consider whole taxa rather than single species, so that
groups of species can be inferred as giving rise to new groups (Mayr, Ernst and
Bock, W.J., 2002).
• Evolutionary taxonomy differs from strict pre-Darwinian Linnaean
taxonomy(producing orderly lists only), in that it builds evolutionary trees. While
in phylogenetic nomenclature each taxon must consist of a single ancestral node
and all its descendants, evolutionary taxonomy allows for groups to be excluded
from their parent taxa (e.g. dinosaurs are not considered to include birds, but to
have given rise to them), thus permitting paraphyletic taxa (Grant, V. 2003 and
Aubert, D. 2015).
24.
25. Historical Background
• Evolutionary Systematics arose as a result of influence of the theory of
evolution on Linnaean taxonomy. Linnaean taxonomy refers to rank-based
scientific classification. Linnaean classification oppose cladistics classification
concept.
• In this type of classification, the animals and plants are orderly placed into
dendrogram. Dendrogram is a tree diagram, which shows taxonomic
relationships.
• The concept arose after study of transmutation of species by various scientists
like Louis M de Maupertuis (1751), Erasmus Darwin (1796) and J B Lamarck
(1809).
• The concept was formally mentioned in the book ‘the Origin of Species’ by
Charles Darwin in 1859.
• T H Huxley scientifically argued that birds are descendants of dinosaurs after
study of fossils of Archaeopteryx.
26.
27. Tree of Life
• It is a tool to present the evolution of life and describe the relationships
between organisms. In other words, it represents genealogical
relationships. The idea was firstly published the book ‘the origin of
species’ by Charles Darwin in 1859. Seven years later, German Zoologist
Ernst Haeckel drew up a more comprehensive tree.
• Tree of life is created by compiling the comprehensive phylogenetic
databases rooted at the last universal common ancestor of life on earth.
• Typical example of database represented by tree of life is ‘Open Tree of
Life’. It is an open digital database published in 2015.
• Lamarck produced first branching tree of animals in his book ‘Philosophie
Zoologique’ which is upside down tree starting with worms and ending
with mammals.
28. Haeckel tree of life
• Haeckel published his concept in the book ‘General
Morphology of Organisms’ in 1866.
• The root of tree symbolizes a common primordial
ancestor from which all other forms emerged.
• He developed his tree over almost 1000 pages based
on paleontological, embryological and systematic
data.
• During his work, he also coined the term ecology
describing it as the whole science of the relations of
the organism to the environment.
29.
30.
31. Phenetics
• The way to classify organisms based on overall similarity in morphology
i.e. observable traits, regardless of their phylogeny or evolutionary
relation.
• Phenetics is termed as numerical taxonomy or taximetrics.
• Phenetics is the techniques of clustering and ordination of organisms by
reducing the variation to a manageable level. The variations are
measured by dozens of variables, and then presenting them as two- or
three-dimensional graphs.
• Phenetics classifies organisms in two ways: artificial and natural
• Artificial classification: It is based on one or few easily observable
characters. Linnaeus used this type of classification.
32. • Natural Classification: the classification is based on similarities.
Hooker and Bentham used this type of classification.
• Operational Taxonomic Units (OTUs): it is a practical definition
to group individuals by similarity, equivalent to but not
necessarily in line with classical Linnaean taxonomy or modern
evolutionary taxonomy. Nowadays, OUT refers to clusters of
organisms, grouped by DNA sequence similarity of a specific
taxonomic marker gene.
• Phenogram: it is a branching diagrammatic tree used
in phenetic classification to illustrate the degree of similarity
among taxa.
33.
34. Cladistics
• The method of classifying organisms by categorizing them in groups based on
the most recent common ancestor.
• The classification correlates with synapomorphies that can be traced to most
recent common ancestor and are not present in more distant groups and
ancestors.
• Synapomorphy: characteristics present in an ancestral species and shared
exclusively by its evolutionary descendants
• The method was firstly used by German Entomologist Willi Hennig, who referred
it as phylogenetic systematics.
• In the 1990s, the development of effective polymerase chain
reaction techniques allowed the application of cladistic methods to biochemical
and molecular genetic traits of organisms, vastly expanding the amount of data
available for phylogenetics.
• Cladistic can be studied in three different way of characteristics: Plesiomorphy,
apomorphy and homoplay
35. Cladogram
• The outcome of a cladistics is a cladogram. Cladogram is a tree
shaped diagram which is interpreted to represent the best hypothesis
of phylogenetic relationships. Cladogram is also coined as
dendrogram.
• Every cladogram is based on a particular dataset analyzed with a
particular method. Datasets are tables consisting of molecular,
morphological, ethological and/or other characters and a list
of operational taxonomic units (OTUs), which may be genes,
individuals, populations, species, or larger taxa that are presumed to
be monophyletic and therefore to form, all together, one large clade;
phylogenetic analysis infers the branching pattern within that clade.
36.
37. Plesiomorphy
• A plesiomorphy ("close form") or ancestral state is a character state
that a taxon has retained from its ancestors. When two or more taxa
that are not nested within each other share a plesiomorphy, it is
a symplesiomorphy (from syn-, "together"). Symplesiomorphies do
not mean that the taxa that exhibit that character state are necessarily
closely related. For example, Reptilia is traditionally characterized by
(among other things) being cold-blooded (i.e., not maintaining a
constant high body temperature), whereas birds are warm-blooded.
Since cold-bloodedness is a plesiomorphy, inherited from the common
ancestor of traditional reptiles and birds, and thus a symplesiomorphy
of turtles, snakes and crocodiles (among others), it does not mean that
turtles, snakes and crocodiles form a clade that excludes the birds.
38. Apomorphy
• An apomorphy is a character that is different from the form found in an
ancestor, i.e., an innovation, that sets the clade apart from other clades.
• Autoapomorphy: autapomorphy is a distinctive feature, known as
a derived trait, that is unique to a given taxon. That is, it is found only in
one taxon, but not found in any others or outgroup taxa, not even those
most closely related to the focal taxon. Typical example is snake in reptilian
group.
• Synapomorphy: synaphomorphy is a characteristic present in an ancestral
species and shared exclusively (in more or less modified form) by its
evolutionary descendants. Typical example is tetrapod character among
different groups in reptiles.
39.
40. Homoplasy
• The character state that is shared by two or more organisms but is absent
from their common ancestor or from a later ancestor in the lineage leading
to one of the organisms.
• Both mammals and birds are able to maintain a high constant body
temperature (i.e., they are warm-blooded). However, the accepted
cladogram explaining their significant features indicates that their common
ancestor is in a group lacking this character state, so the state must have
evolved independently in the two clades. Warm-bloodedness is separately
a synapomorphy of mammals (or a larger clade) and of birds (or a larger
clade), but it is not a synapomorphy of any group including both these
clades.
41. • Monophyly: In cladistics, a monophyletic group, or clade, is a group of
organisms that consists of all the descendants of a common ancestor. The
clade is characterized by one or more apomorphies i.e. derived character
states present in the first member of the taxon, inherited by its
descendants and not inherited by any other taxa.
• Paraphyly: A paraphyletic assemblage is one that is constructed by taking
a clade and removing one or more smaller clades. Removing one clade
produces a singly paraphyletic assemblage, removing two produces a
doubly paraphylectic assemblage, and so on. A paraphyletic assemblage is
characterized by one or more plesiomorphies.
• Polyphyly: A polyphyletic assemblage is one which is neither
monophyletic nor paraphyletic. A polyphyletic assemblage is
characterized by one or more homoplasies.
42.
43.
44. Phenetics vs. Cladistics
• Phenetics concept was firstly described by Peter Sneath and
Robert Sokal in 1963 as a principle of numerical taxonomy.
Cladistics was described by Willi Hennig in 1966 as
phylogenetic systematic.
• Phenetic methods construct phenogram by considering the
current states of characters without regard to the evolutionary
history. Cladistic methods construct cladograms rely on
assumptions about ancestral relationships as well as on current
data.
• Phenetic method is termed as distance method while Cladistic
method is termed as character-state method.
45. Molecular Systematics
• Molecular systematics is the use of molecular genetics to study the
evolution of relationships among individuals and species.
• Molecular biology has revolutionized the field of systematics. DNA
evolves by mutations being incorporated in the DNA and fixed in
populations. This will lead to divergence of DNA sequences in different
species. Although diverged, we can refer to two DNA sequences
as homologous. Divergence of DNA nicely demonstrates descent with
modification as a definition of evolution. For this reason, DNA should be
an excellent tool for inferring phylogenies: large number of homologous
characters that should be less subject to convergent evolution than other
characters that might lead to a confusion of grade and clade.
• Molecular approaches to systematics for us to think about the rates of
molecular evolution. If DNA or proteins evolved at a constant rate in all
species, then one could use estimates of sequence divergence to build
very reliable phylogenies.
46. • Mitochondrial DNA (mtDNA) is a pivotal tool in evolutionary and
population genetics including molecular ecology. The control region of
the mitochondrial DNA (mtDNA) due to its elevated mutation rate, lack
of recombination and maternal inheritance serve as a biomarker
in phylogenetic studies.
• The molecular clock is figurative term for a technique that uses the
mutation rate of biomolecules to deduce the time in prehistory when
two or more life forms diverged. The biomolecular data used for such
calculations are usually nucleotide sequences for DNA or amino acid
sequences for proteins. Instead of measuring seconds, minutes and
hours, says Hedges, the molecular clock measures the number of
changes, or mutations, which accumulate in the gene sequences of
different species over time.
47.
48. उद्यमेन हि हिध्यन्ति कार्ााहि न मनोरथैः।
न हि िुप्तस्य हििंिस्य प्रहिशन्ति मुखे मृगा: ।।