This document discusses balanced and unbalanced lethal genes. It provides the example of the yellow mouse, which is lethal when homozygous for the yellow gene due to failure of yellow sperm to penetrate yellow eggs. It then describes balanced lethal systems, where two different recessive lethal genes balance each other's effects to allow survival of heterozygotes. Muller's discovery of the balanced lethal genes beaded and Le in Drosophila is described. The document also discusses chromosome complexes in Oenothera lamarckiana, where the alpha and beta gametic complexes lead to gametic lethality, while complexes gaudens and velans show zygotic lethality.
The term balanced tertiary trisomic has three words of which (1) “trisomic” indicates the presence of extra chromosome, (2) “tertiary” indicates that the extra chromosome is a trans-located chromosome, and (3) “balanced” refers to the breeding behaviour of the trisomic.
Ramage defined the BTT as a tertiary trisomic constructed in such a way that the dominant allele of a marker gene, closely linked with the translocation breakpoint of the extra chromosome is carried on the extra chromosome, and the recessive allele is carried on the two normal chromosomes that constitute the diploid complement. The dominant marker gene may be located on the centromere segment or the trans-located segment of the extra chromosome.
Self-incompatibility refers to the inability of a plant with functional pollen to set seeds when self pollinated. It is the failure of pollen from a flower to fertilize the same flower or other flowers of the same plant.
Advanced biometrical and quantitative genetics akshayAkshay Deshmukh
Additive and Multiplicative Model
Shifted Multiplicative Model
Analysis and Selection of Genotype
Methods and steps to select the best model
Bioplot and mapping genotype
The term balanced tertiary trisomic has three words of which (1) “trisomic” indicates the presence of extra chromosome, (2) “tertiary” indicates that the extra chromosome is a trans-located chromosome, and (3) “balanced” refers to the breeding behaviour of the trisomic.
Ramage defined the BTT as a tertiary trisomic constructed in such a way that the dominant allele of a marker gene, closely linked with the translocation breakpoint of the extra chromosome is carried on the extra chromosome, and the recessive allele is carried on the two normal chromosomes that constitute the diploid complement. The dominant marker gene may be located on the centromere segment or the trans-located segment of the extra chromosome.
Self-incompatibility refers to the inability of a plant with functional pollen to set seeds when self pollinated. It is the failure of pollen from a flower to fertilize the same flower or other flowers of the same plant.
Advanced biometrical and quantitative genetics akshayAkshay Deshmukh
Additive and Multiplicative Model
Shifted Multiplicative Model
Analysis and Selection of Genotype
Methods and steps to select the best model
Bioplot and mapping genotype
Genetics- Chapter 5 - Principles of inheritance and variation.docxAjay Kumar Gautam
Genetics is a branch of biology concerned with the study of genes, genetic variation, and heredity in organisms. Though heredity had been observed for millennia, Gregor Mendel, Moravian scientist and Augustinian friar working in the 19th century in Brno, was the first to study genetics scientifically. Mendel studied "trait inheritance", patterns in the way traits are handed down from parents to offspring over time. He observed that organisms (pea plants) inherit traits by way of discrete "units of inheritance". This term, still used today, is a somewhat ambiguous definition of what is referred to as a gene.
Discuss the methods Mendel utilized in his research that led to his success in understanding the process of inheritance
The science community ignored the paper, possibly because it was ahead of the ideas of heredity and variation accepted at the time. In the early 1900s, 3 plant biologists finally acknowledged Mendel’s work. Unfortunately, Mendel was not around to receive the recognition as he had died in 1884.
The presentation is made on a branch of botany doined Genetics and has been provided by thunder group for others connect here :
http://www.studentisalsohere.blogspot.com
http://www.facebook.com/studentisalsohere
In 1905, the French biologist Lucien Cuénot discovered an interestin.pdffashionscollect
In 1905, the French biologist Lucien Cuénot discovered an interesting mutant mouse displaying a
yellow coat color. He bred the mouse and its progeny for several generations but could never
obtain a pure breeding stock of yellow mice! Normal mice have a coat color called Agouti which
appears gray. When he crossed pure breeding gray Agouti mice with the yellow mouse, half the
progeny had the gray Agouti coat and half had the light yellow coat. When he crossed the F1
yellow mice with each other, he found that 1/3 of the F2 progeny had the gray Agouti coat and
2/3 had the yellow coat. When he crossed the F2 yellow progeny with pure breeding Agouti
mice, he found again that they produced 50% gray Agouti mice and 50% yellow mice.
Based on these results, you would conclude that relative to the Agouti coat color, the Yellow
coat color is:
A. Completely Dominant
B. Incompletely Dominant
C. Co-dominant
D. Incompletely Penetrant
E. Recessive
Cuénot was never able to produce a pure breeding strain of yellow mice even after trying several
crosses for several years. Provide a one-sentence explanation for why Cuénot was unable to
obtain yellow mice but not a pure breeding stock of yellow mice.
Solution
(A) It is complete dominant. As per definition, dominant allele shows phenotype in homozygous.
Genes are located on chromosomes and consist of DNA. They are passed from parents to their
offspring through reproduction. Genes also contain information about a specific characteristic or
trait and can either be dominant or recessive. Each gene has a designated place on every
chromosome, called a locus. All copies of a gene are not identical and alternative forms of a gene
is called alleles that lead to the alternative or different form of one trait. Alleles are helpful in
identification of the two members of a gene pair, which produce opposite contrasting
phenotypes, e.g., b is an allele of B and vice versa. When the two alleles of a gene are identical,
the individual is homozygous for that trail, and on the other hand, if there are two different
alleles, the individual is heterozygous. A homozygous pair can be either dominant (AA, BB) or
recessive (aa, bb). Heterozygous pairs are made up of one dominant and one recessive allele (Aa,
Bb). In heterozygous individuals, only one allele, the dominant one, is able to express itself,
while the other allele, the recessive, is hidden but still present. The dominant genes are denoted
by upper case letters and recessive genes are denoted by lower case letters. The word genotype
was created to identify genes of an individual and phenotype for the external appearance of the
trait and genes.Phenotype and genotype are terms used to describe the difference between the
visible expressions of the trait versus the actual gene makeup. An individual, which expresses a
dominant trait may carry a recessive allele, but the recessive expression is hidden by its dominant
partner. Mendel\'s observations from these experiments can be summar.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
1. ACHARYA N.G. RANGAAGRICULTURAL UNIVERSITY
S.V. AGRICULTURAL COLLEGE , TIRUPATI
Department of Genetics and Plant Breeding
Balanced Lethals and Chromosome Complexes
Submitted by
M. Venkata Rama Sai
TAM/2022-24
2. Lethality
Perhaps the most serious effect a gene can have on an
organism is lethality
In 1905, a French geneticist reported the inheritance of a
mouse body colour gene ‘Yellow’ that did not appear to fit
into normal mendalian segregation
In this case, Cuenot couldn’t find homozygous yellow
body coated mice, when back crossed yellow to agouti
and he assumed that it’s because the yellow sperm
couldn’t penetrate yellow egg
But later, Castle and Little offered explanation that the
yellow homozygous progeny did formed but it was died
in utero
3. According to them yellow had a dominant effect on coat colour trait but
recessive effect on lethality, so that homozygous yellow are inviable
A cross of Yellow x Yellow always produced 2:1 (Heterozygous yellow :
Agouti) instead of 1:2:1
Lethal mutations are produced when mutation in a usual allele distorts the
function of an essential gene . This in turn results in a phenotype when
expressed, lethal to the concerned organism
Types of lethal alleles:
1) Dominant lethals
2) Recessive lethals
3) Conditional lethals
4) Gametic lethals
5) Balanced lethals
4. Balanced lethals
Two different lethal systems operate in an organism and balance
each other’s effects – Balanced lethals
It was first reported by ‘Muller’ in Drosophila
Muller observed a peculiar stock of drosophila flies which are
always heterozygous for a particular lethal gene ‘beaded’.
5. This beaded has dominant effect on wing shape as well
as it is lethal in homozygous state. So all beaded winged
ones are heterozygous ( Similar to heterozygous yellow
mouse) and the recessive ones are normal winged ones.
A cross of Beaded x Beaded should result in 2:1 Beaded
heterozygotes and recessive normal winged homozygotes.
But Muller didn’t even observed normal winged ones in
this unusual stock. Since the beaded ones are
heterozygous and normal ones are homozygous the
question arised was what has happened to homozygotes?
6. Then Muller found that the homozygous chromosome carrying
normal allele for beaded also carried a gene that was lethal in
homozygous condition i.e., ‘Le’
Since beaded and Le are recessive lethals and are not allelic,
only heterozygous beaded are survived when two beaded
heterozygotes are crossed.
The beaded heterozygotes are therefore self perpetuating as long
as the homologous chromosome also contains a different
recessive lethal factors.
This balancing effect between two different lethals in a self
perpetuating stock was named as Balanced lethals
7. Here both genes are tightly linked in a repulsion phase, where
a dominant allele of one gene is linked to a recessive allele of
other gene
In such cases one parent contributes the dominant allele of
gene one and recessive allele of gene two , while the other
parent contributes the recessive allele of gene one and
dominant allele of gene two.
This arrangement of lethal alleles maintains a heterozygous
combination and ensures the survival of the Heterozygotes and
maintains permanent hybridity. At the same time it causes the
lethality of both homozygotes.
8. B le
b Le
B le
b Le
B le b Le
B le
b Le
B le
b Le
B le
b Le
X
B le
B le
b Le
b Le
DIES
DIES
PARENTS
PROGENY
9. Balanced lethal Mechanisms:
There are two balanced lethal mechanisms : 1) Zygotic lethality
2) Gametic lethality
Both the Gametic and Zygotic lethality leads to production of
heterozygotes
Zygotic lethality: In this, both types of gametes will be functional
on male as well as on female side. But the homozygote progeny do
not survive due to recessive lethals. Ex: Oenothera lamarckiana
Gametic lethality : In both male and female gametes, certain type
of non-functional gametes are produced and only 50 percent of
gametes are viable. Ex: biennis, Muricata etc
Oenothera lamarckina
10. CHROMOSOME COMPLEXES
De Vries experimented on a plant called Oenothera lamarckiana.
When Oenothera was self pollinated or crossed with other races most of
its progeny are similar to the parents, but a few were different plants
It was later revealed that most of the variants isolated are due to its
anamolous chromosome behaviour given by Otto Renner
The chromosome forms multiple ring at meiotic metaphase and
telomeres only involve in recombination and plant shows complex
heterozygosity i.e, maternal and paternal chromosomes are arranged in
alternate disjunction.
In Oenothera sps. each functional gamete normally contains seven
chromosomes which together maybe described as gametic complex.
Each species has two such gametic complexes and are also called as
Renner complexes
11. Gametic lethality in Oenothera lamarckiana
Thus, in Oenothera the two gametic complexes are found
and are called alpha α and beta β.
The alpha is present in functional egg cells and beta in
functional pollen grains . Similarly the egg cells containing
beta are non functional and pollen containing alpha are
non functional.
This leads to 50 percent gamete abortion but a full seed
set. This is due to the fact that in female gametophyte the
megaspore which is carrying alpha complex only forms
embryo.
Thus alpha complex always unites with beta complex in
pollen, plants breed true for heterozygous condition.
α β
α
β
αβ
Gametic lethality
12. Although only two complexes are present in each race , these gene complexes
differ in different races so that a large number of complexes occur in Oenothera.
Each complex is given a specific name and are collectively called as Renner
complexes.
Ex: 1) biennis – albicans and rubens = only Rubens type pollen and albicans egg
2) Muricata – rigens and curvans = only curvans pollen and rigens egg
3) lamarckiana – gaudens and flavens = gaudens and flavens pollen
Zygotic lethality :
When lamarckiana is self fertilized half of seed did not germinate. But when it is
crossed with other races all seeds are viable
Then Renner assumed that half of seed or embryo must be undergoing
homozygotic lethality and the plant must be heterozygous for two gene
complexes
13. For instance , in Oenothera lamarckiana, complexes are gaudens
and velans which is indicated by G and V .
These complexes are lethal when present in homozygous condition
and the lethality occurs in zygote condition.
Here the gametes are fully functional in both males and females and
both the homozygous zygotes undergoes zygotic lethality.
Thus the self perpetuating heterozygotes are produced here since
because of the presence of two lethal systems called Balanced lethals
GG GV
GV VV
G V
G
V
14.
15. References:
Cytogenetics – Genetics and evolution : P. K. Gupta
Genetics : Strickberger
Renner’s studies in Oenothera lamarckiana research paper