Quorum sensing allows bacteria to communicate and coordinate behaviors in a population-density dependent manner. Bacteria produce and release signaling molecules called autoinducers that accumulate over time. When a threshold concentration is reached, it triggers a change in gene expression across the population. This process regulates behaviors like bioluminescence, biofilm formation, and virulence factor production. The mechanism was first described in Vibrio fischeri, where the lux operon controls luciferase expression in response to autoinducer concentration. Quorum sensing inhibition is now being explored as a potential antimicrobial therapy by blocking bacterial communication and virulence.
Quorum sensing allows bacteria to coordinate gene expression based on cell population density through the use of signaling molecules. As the bacteria population grows, the concentration of these signaling molecules increases until a threshold is reached that triggers a group response. Quorum quenching disrupts quorum sensing by degrading these signaling molecules. Compounds that inhibit quorum sensing have potential applications in controlling bacterial virulence without promoting antibiotic resistance.
Bacterial processes such as biofilm formation, virulence factor secretion, bioluminescence, antibiotic production, sporulation, and competence for DNA uptake are often critical for survival
However, these behaviors are seemingly futile if performed by a single bacterium acting alone. Yet, we know that bacteria perform these tasks effectively. How do bacteria manage?
We now understand that, through a process called quorum sensing, bacteria synchronously control gene expression in response to changes in cell density and species complexity.
Industrial Production of L-Lysine by FermentationKuldeep Sharma
Lysine is an essential amino acid that is used in the biosynthesis of proteins. Lysine is required for the nutrition of animals and humans. Lysine is useful as medicament, chemical agent, food material (food industry) and feed additives (animal food). It's demand has been steadily increasing in recent years. Several thousand tones of L-lysine are annually produced worldwide, almost by microbial fermentation.
±For Education Purpose Only
1. The document discusses the production of lactic acid, glutamic acid, and cheese through fermentation processes. Lactic acid bacteria and fungi are used to produce lactic acid from sugars. Corynebacterium glutamicum is commonly used to produce glutamic acid from glucose through biosynthesis pathways.
2. The production of cheese involves pasteurizing milk, adding bacterial cultures, coagulating the milk with rennet enzyme, separating curd from whey, and ripening the curd through the action of molds and bacteria.
3. Specific microorganisms and fermentation steps are outlined for efficiently producing these three compounds at an industrial scale through microbial fermentation of sugars and carbohydrates.
This document discusses aeration and agitation in fermentation processes. It describes how oxygen is supplied to microbial cultures through aeration, which involves bubbling air through the liquid or agitating the liquid to increase oxygen absorption. Key factors that influence oxygen transfer rates include the agitator, baffles, aeration system, dissolved oxygen concentration, volumetric mass transfer coefficient (KLa) of the fermenter, and oxygen demand of the microbial culture. Methods for determining the KLa value include the sulphite oxidation technique and gassing out techniques.
Quorum sensing in bacterial populationsKhaled Touny
Quorum sensing allows bacteria to communicate via small diffusible molecules and regulate gene expression in response to cell population density. In Gram-negative bacteria, these signaling molecules are usually acylated homoserine lactones. Quorum sensing plays an important role in biofilm formation, allowing bacteria to synchronize behaviors like polysaccharide synthesis and adherence as the biofilm matures.
Quorum sensing allows bacteria to communicate and coordinate behaviors in a population-density dependent manner. Bacteria produce and release signaling molecules called autoinducers that accumulate over time. When a threshold concentration is reached, it triggers a change in gene expression across the population. This process regulates behaviors like bioluminescence, biofilm formation, and virulence factor production. The mechanism was first described in Vibrio fischeri, where the lux operon controls luciferase expression in response to autoinducer concentration. Quorum sensing inhibition is now being explored as a potential antimicrobial therapy by blocking bacterial communication and virulence.
Quorum sensing allows bacteria to coordinate gene expression based on cell population density through the use of signaling molecules. As the bacteria population grows, the concentration of these signaling molecules increases until a threshold is reached that triggers a group response. Quorum quenching disrupts quorum sensing by degrading these signaling molecules. Compounds that inhibit quorum sensing have potential applications in controlling bacterial virulence without promoting antibiotic resistance.
Bacterial processes such as biofilm formation, virulence factor secretion, bioluminescence, antibiotic production, sporulation, and competence for DNA uptake are often critical for survival
However, these behaviors are seemingly futile if performed by a single bacterium acting alone. Yet, we know that bacteria perform these tasks effectively. How do bacteria manage?
We now understand that, through a process called quorum sensing, bacteria synchronously control gene expression in response to changes in cell density and species complexity.
Industrial Production of L-Lysine by FermentationKuldeep Sharma
Lysine is an essential amino acid that is used in the biosynthesis of proteins. Lysine is required for the nutrition of animals and humans. Lysine is useful as medicament, chemical agent, food material (food industry) and feed additives (animal food). It's demand has been steadily increasing in recent years. Several thousand tones of L-lysine are annually produced worldwide, almost by microbial fermentation.
±For Education Purpose Only
1. The document discusses the production of lactic acid, glutamic acid, and cheese through fermentation processes. Lactic acid bacteria and fungi are used to produce lactic acid from sugars. Corynebacterium glutamicum is commonly used to produce glutamic acid from glucose through biosynthesis pathways.
2. The production of cheese involves pasteurizing milk, adding bacterial cultures, coagulating the milk with rennet enzyme, separating curd from whey, and ripening the curd through the action of molds and bacteria.
3. Specific microorganisms and fermentation steps are outlined for efficiently producing these three compounds at an industrial scale through microbial fermentation of sugars and carbohydrates.
This document discusses aeration and agitation in fermentation processes. It describes how oxygen is supplied to microbial cultures through aeration, which involves bubbling air through the liquid or agitating the liquid to increase oxygen absorption. Key factors that influence oxygen transfer rates include the agitator, baffles, aeration system, dissolved oxygen concentration, volumetric mass transfer coefficient (KLa) of the fermenter, and oxygen demand of the microbial culture. Methods for determining the KLa value include the sulphite oxidation technique and gassing out techniques.
Quorum sensing in bacterial populationsKhaled Touny
Quorum sensing allows bacteria to communicate via small diffusible molecules and regulate gene expression in response to cell population density. In Gram-negative bacteria, these signaling molecules are usually acylated homoserine lactones. Quorum sensing plays an important role in biofilm formation, allowing bacteria to synchronize behaviors like polysaccharide synthesis and adherence as the biofilm matures.
Microbial production of Organic acids.pptxSwethaSmenon1
This document summarizes the microbial production of organic acids like citric acid and lactic acid. Citric acid is produced industrially through surface or submerged fermentation of Aspergillus niger and can be used as a food acidulant or in processed foods. Lactic acid is produced through fermentation of Lactobacillus bacteria or Rhizopus fungus and used in baking, medicine, and plastics manufacturing. The fermentation processes, extraction methods, and purification steps for both citric acid and lactic acid production are described at a high level.
Industrial Production of Amino Acid (L-Lysine)Mominul Islam
Three amino acids which are produced at large scale includes-
- L-lysine
- L-glutamic acid
- DL- methionine
We are now going to discuss about the production of L-Lysine
This document discusses quorum sensing in bacterial pathogens. It describes how quorum sensing allows bacterial populations to coordinate gene expression based on cell density through the use of signaling molecules. It provides examples of quorum sensing systems in Staphylococcus aureus and Pseudomonas aeruginosa that regulate virulence factors. The document also discusses potential therapeutic approaches that target quorum sensing systems to attenuate bacterial pathogen virulence.
Fermentation
Scale up of fermentation
Steps in scale up
Scale up fermentation process
Optimizing scale up of fermentation process
Rules followed while doing scale up
Studies carried out during scale up
Reference
This document provides an overview of media formulation for fermentation and bioprocessing. It discusses the types of media, including complex and synthetic media. The key requirements for formulated media are then outlined, including carbon sources, oxygen sources, water, nitrogen sources, minerals, growth factors, and antifoams. Specific examples are given for each requirement. The document emphasizes that media formulation is essential for successful laboratory experiments and manufacturing processes.
Beer is an alcoholic beverage made by fermenting grains like barley with hops and yeast. The key ingredients are barley, hops, yeast, and water. There are two main types - top fermented beer made with Saccharomyces cervisiae yeast and bottom fermented beer made with Saccharomyces carlsbergences yeast. Wine is an alcoholic beverage made by fermenting fruit juice, most commonly grape juice. The major steps in the production of beer and wine are preparation of ingredients, fermentation, aging or storage, and packaging. Microbial contamination and temperature fluctuations can affect the quality of beer and wine.
This document discusses the development of inoculum for industrial fermentation processes. It defines inoculum as a mixture of cultured microbes and the media they are growing in. The key steps in inoculum development are preparing a suitable growth media, maintaining optimal pH and nutrient levels, and conducting growth in stepwise increasing volumes. Examples of common inoculum media compositions are provided for vitamin and bacterial insecticide production processes. Developing high quality inoculum is important for efficiently adapting cultures to fermentation conditions.
This document discusses various types of fermenters used in industrial fermentation processes. It describes 7 types of fermenters: 1) Waldhof fermenter, 2) Acetators and cavitators, 3) Tower fermenter, 4) Cylindro-conical vessels, 5) Air lift fermenter, 6) Deep jet fermenter, 7) The cyclone column. For each type, it provides details on their design, operating principles, and applications. The key advantages of each fermenter type for different fermentation processes are highlighted.
This document discusses the production of acetic acid using microbes. It begins by providing background on acetic acid, noting that it is also known as ethanoic acid and is the main component of vinegar. It then describes acetic acid bacteria, the gram-negative bacteria that oxidize ethanol to produce acetic acid. The document outlines two methods for producing acetic acid - trickling generation using wood chips as a substrate, and submerged liquid fermentation using ethanol and Acetobacter aceti in a silicon tube. It states that submerged liquid fermentation is more efficient, producing a purer form of acetic acid in a shorter time period. Finally, some common uses of acetic acid are mentioned.
This document discusses tower fermenters, which are elongated fermentation vessels with a height to width aspect ratio of 6:1 or more that allow for the unidirectional flow of gases. There are several types of tower fermenters including bubble columns, vertical tower beer fermenters, and multistage fermenter systems. Tower fermenters have been used for the production of products such as citric acid, tetracycline, beer, and to cultivate organisms like yeast and E. coli. They provide a simple design for aerobic fermentation of cells and enzymes.
Control systems are necessary in fermenters to carefully monitor and regulate parameters like temperature, pH, oxygen levels, agitation and foaming. Sensors integrated directly into the fermenter provide real-time readings of these parameters to control systems which can activate mechanisms to precisely adjust the fermentation process as needed through elements like heating/cooling systems, pumps to add acids/bases and valves to control gas flow. Proper monitoring and control of these critical parameters is essential for optimal microbial growth and product formation.
Glutamic acid is an important amino acid that can be produced through both chemical synthesis and microbial fermentation. The document discusses the industrial production of glutamic acid through fermentation using Corynebacterium glutamicum. It describes the fermentation process, including batch, fed-batch, and continuous fermentation. After fermentation, separation and purification processes are used to isolate glutamic acid, which is then converted to monosodium glutamate (MSG) for commercial use as a flavor enhancer.
Bacteriocin are produced from lactic acid bacteria .
various lactic acid bacteria produces different kinds of bacteriocin .
Bacteriocin can be used as food preservative
This document discusses bacteriocins, which are antibiotic-like protein toxins produced by bacteria. Bacteriocins inhibit or kill closely related bacterial strains. They were first discovered in 1925 and include colicins from E. coli and pyocins from P. aeruginosa. Bacteriocins have protein or peptide structures and are produced by both Gram-positive and Gram-negative bacteria. They can degrade bacterial cell membranes or DNA. Bacteriocins have potential medical importance in treating antibiotic-resistant infections and some cancers.
This document discusses the production of L-glutamic acid via fermentation. It begins with an introduction to L-glutamic acid and its commercial uses. It then covers the history and development of L-glutamic acid production, focusing on the discovery of Corynebacterium glutamicum as the main microorganism used. The document outlines the fermentation process and factors that influence production, such as carbon sources, nitrogen sources, and growth factors. It concludes by discussing applications of L-glutamic acid in food production, beverages, cosmetics, agriculture, and other industries.
Chitinase is an enzyme that degrades chitin, a polysaccharide found in fungal cell walls and crustacean exoskeletons. Microbes like Serratia marceance, Stenotrophomonas maltophilia, Saccharomyces cerevisiae, and Trichoderma spp can produce chitinase. Upstream processing for chitinase production involves inoculum development using stock cultures and fermentation using media containing chitin, yeast extract, and phosphate buffers. Downstream processing separates and purifies chitinase from fermentation broth using centrifugation, precipitation with ammonium sulfate, ion exchange chromatography, and crystallization. Purified chit
This document discusses bacteria and algae as sources of single cell protein (SCP). It provides background on SCP, describing how certain microorganisms like yeast, fungi, algae and bacteria grown on carbon sources can be used to produce protein for human and animal consumption. The document then discusses the history of SCP production and some key microorganisms used, focusing on production using algae like Spirulina and bacteria like Methylophilus methylotrophus. It outlines the overall production processes for both algal and bacterial SCP.
Cellulases are enzymes that break down cellulose by hydrolyzing the beta-1,4-glycosidic bonds between glucose molecules in cellulose. There are three main types of cellulases - endocellulases, exocellulases, and beta-glucosidases. Fungi are a major producer of cellulases and species like Aspergillus, Trichoderma, and Penicillium are used industrially to produce cellulase enzymes. Cellulases have many applications including use in food processing, textiles, pulp and paper, biofuels, agriculture, and more.
The material describes components of industrial fermentation media with their respective metabolic importance for the industrial microbes. it also addresses industrial scale sterilization methods.
Process variables & product recovery in FermentationKRATIKA SINGHAM
The document discusses various process variables and product recovery methods in fermentation. It covers key fermentation control variables like temperature, pressure, dissolved oxygen, pH and how they are measured and regulated. It also describes different techniques for recovering fermentation products like centrifugation, filtration, precipitation, liquid-liquid extraction and drying. The document provides detailed information on process control parameters and challenges in optimizing fermentation and downstream processing.
This document summarizes a study that isolated and characterized lactic acid bacteria from various environmental samples. 21 lactic acid bacteria isolates were obtained from milk, water, soil and plant samples. 10 were identified as Lactobacillus, 3 as Enterococcus, 2 as Staphylococcus, 5 as Lactococcus, and 1 as Leuconostoc based on biochemical and physiological tests. 6 of the isolates were found to harbor plasmids. Further characterization identified 3 isolates as Enterococcus faecium and 1 each as Weissella confusa, Pediococcus pentosaceus, and Staphylococcus epidermidis based on 16S rRNA gene sequencing. Some isolates showed inhibitory activity
Microbial production of Organic acids.pptxSwethaSmenon1
This document summarizes the microbial production of organic acids like citric acid and lactic acid. Citric acid is produced industrially through surface or submerged fermentation of Aspergillus niger and can be used as a food acidulant or in processed foods. Lactic acid is produced through fermentation of Lactobacillus bacteria or Rhizopus fungus and used in baking, medicine, and plastics manufacturing. The fermentation processes, extraction methods, and purification steps for both citric acid and lactic acid production are described at a high level.
Industrial Production of Amino Acid (L-Lysine)Mominul Islam
Three amino acids which are produced at large scale includes-
- L-lysine
- L-glutamic acid
- DL- methionine
We are now going to discuss about the production of L-Lysine
This document discusses quorum sensing in bacterial pathogens. It describes how quorum sensing allows bacterial populations to coordinate gene expression based on cell density through the use of signaling molecules. It provides examples of quorum sensing systems in Staphylococcus aureus and Pseudomonas aeruginosa that regulate virulence factors. The document also discusses potential therapeutic approaches that target quorum sensing systems to attenuate bacterial pathogen virulence.
Fermentation
Scale up of fermentation
Steps in scale up
Scale up fermentation process
Optimizing scale up of fermentation process
Rules followed while doing scale up
Studies carried out during scale up
Reference
This document provides an overview of media formulation for fermentation and bioprocessing. It discusses the types of media, including complex and synthetic media. The key requirements for formulated media are then outlined, including carbon sources, oxygen sources, water, nitrogen sources, minerals, growth factors, and antifoams. Specific examples are given for each requirement. The document emphasizes that media formulation is essential for successful laboratory experiments and manufacturing processes.
Beer is an alcoholic beverage made by fermenting grains like barley with hops and yeast. The key ingredients are barley, hops, yeast, and water. There are two main types - top fermented beer made with Saccharomyces cervisiae yeast and bottom fermented beer made with Saccharomyces carlsbergences yeast. Wine is an alcoholic beverage made by fermenting fruit juice, most commonly grape juice. The major steps in the production of beer and wine are preparation of ingredients, fermentation, aging or storage, and packaging. Microbial contamination and temperature fluctuations can affect the quality of beer and wine.
This document discusses the development of inoculum for industrial fermentation processes. It defines inoculum as a mixture of cultured microbes and the media they are growing in. The key steps in inoculum development are preparing a suitable growth media, maintaining optimal pH and nutrient levels, and conducting growth in stepwise increasing volumes. Examples of common inoculum media compositions are provided for vitamin and bacterial insecticide production processes. Developing high quality inoculum is important for efficiently adapting cultures to fermentation conditions.
This document discusses various types of fermenters used in industrial fermentation processes. It describes 7 types of fermenters: 1) Waldhof fermenter, 2) Acetators and cavitators, 3) Tower fermenter, 4) Cylindro-conical vessels, 5) Air lift fermenter, 6) Deep jet fermenter, 7) The cyclone column. For each type, it provides details on their design, operating principles, and applications. The key advantages of each fermenter type for different fermentation processes are highlighted.
This document discusses the production of acetic acid using microbes. It begins by providing background on acetic acid, noting that it is also known as ethanoic acid and is the main component of vinegar. It then describes acetic acid bacteria, the gram-negative bacteria that oxidize ethanol to produce acetic acid. The document outlines two methods for producing acetic acid - trickling generation using wood chips as a substrate, and submerged liquid fermentation using ethanol and Acetobacter aceti in a silicon tube. It states that submerged liquid fermentation is more efficient, producing a purer form of acetic acid in a shorter time period. Finally, some common uses of acetic acid are mentioned.
This document discusses tower fermenters, which are elongated fermentation vessels with a height to width aspect ratio of 6:1 or more that allow for the unidirectional flow of gases. There are several types of tower fermenters including bubble columns, vertical tower beer fermenters, and multistage fermenter systems. Tower fermenters have been used for the production of products such as citric acid, tetracycline, beer, and to cultivate organisms like yeast and E. coli. They provide a simple design for aerobic fermentation of cells and enzymes.
Control systems are necessary in fermenters to carefully monitor and regulate parameters like temperature, pH, oxygen levels, agitation and foaming. Sensors integrated directly into the fermenter provide real-time readings of these parameters to control systems which can activate mechanisms to precisely adjust the fermentation process as needed through elements like heating/cooling systems, pumps to add acids/bases and valves to control gas flow. Proper monitoring and control of these critical parameters is essential for optimal microbial growth and product formation.
Glutamic acid is an important amino acid that can be produced through both chemical synthesis and microbial fermentation. The document discusses the industrial production of glutamic acid through fermentation using Corynebacterium glutamicum. It describes the fermentation process, including batch, fed-batch, and continuous fermentation. After fermentation, separation and purification processes are used to isolate glutamic acid, which is then converted to monosodium glutamate (MSG) for commercial use as a flavor enhancer.
Bacteriocin are produced from lactic acid bacteria .
various lactic acid bacteria produces different kinds of bacteriocin .
Bacteriocin can be used as food preservative
This document discusses bacteriocins, which are antibiotic-like protein toxins produced by bacteria. Bacteriocins inhibit or kill closely related bacterial strains. They were first discovered in 1925 and include colicins from E. coli and pyocins from P. aeruginosa. Bacteriocins have protein or peptide structures and are produced by both Gram-positive and Gram-negative bacteria. They can degrade bacterial cell membranes or DNA. Bacteriocins have potential medical importance in treating antibiotic-resistant infections and some cancers.
This document discusses the production of L-glutamic acid via fermentation. It begins with an introduction to L-glutamic acid and its commercial uses. It then covers the history and development of L-glutamic acid production, focusing on the discovery of Corynebacterium glutamicum as the main microorganism used. The document outlines the fermentation process and factors that influence production, such as carbon sources, nitrogen sources, and growth factors. It concludes by discussing applications of L-glutamic acid in food production, beverages, cosmetics, agriculture, and other industries.
Chitinase is an enzyme that degrades chitin, a polysaccharide found in fungal cell walls and crustacean exoskeletons. Microbes like Serratia marceance, Stenotrophomonas maltophilia, Saccharomyces cerevisiae, and Trichoderma spp can produce chitinase. Upstream processing for chitinase production involves inoculum development using stock cultures and fermentation using media containing chitin, yeast extract, and phosphate buffers. Downstream processing separates and purifies chitinase from fermentation broth using centrifugation, precipitation with ammonium sulfate, ion exchange chromatography, and crystallization. Purified chit
This document discusses bacteria and algae as sources of single cell protein (SCP). It provides background on SCP, describing how certain microorganisms like yeast, fungi, algae and bacteria grown on carbon sources can be used to produce protein for human and animal consumption. The document then discusses the history of SCP production and some key microorganisms used, focusing on production using algae like Spirulina and bacteria like Methylophilus methylotrophus. It outlines the overall production processes for both algal and bacterial SCP.
Cellulases are enzymes that break down cellulose by hydrolyzing the beta-1,4-glycosidic bonds between glucose molecules in cellulose. There are three main types of cellulases - endocellulases, exocellulases, and beta-glucosidases. Fungi are a major producer of cellulases and species like Aspergillus, Trichoderma, and Penicillium are used industrially to produce cellulase enzymes. Cellulases have many applications including use in food processing, textiles, pulp and paper, biofuels, agriculture, and more.
The material describes components of industrial fermentation media with their respective metabolic importance for the industrial microbes. it also addresses industrial scale sterilization methods.
Process variables & product recovery in FermentationKRATIKA SINGHAM
The document discusses various process variables and product recovery methods in fermentation. It covers key fermentation control variables like temperature, pressure, dissolved oxygen, pH and how they are measured and regulated. It also describes different techniques for recovering fermentation products like centrifugation, filtration, precipitation, liquid-liquid extraction and drying. The document provides detailed information on process control parameters and challenges in optimizing fermentation and downstream processing.
This document summarizes a study that isolated and characterized lactic acid bacteria from various environmental samples. 21 lactic acid bacteria isolates were obtained from milk, water, soil and plant samples. 10 were identified as Lactobacillus, 3 as Enterococcus, 2 as Staphylococcus, 5 as Lactococcus, and 1 as Leuconostoc based on biochemical and physiological tests. 6 of the isolates were found to harbor plasmids. Further characterization identified 3 isolates as Enterococcus faecium and 1 each as Weissella confusa, Pediococcus pentosaceus, and Staphylococcus epidermidis based on 16S rRNA gene sequencing. Some isolates showed inhibitory activity
Bacteria use quorum sensing to regulate virulence gene expression in response to population density. As bacteria density increases and autoinducer molecule concentration rises, bacteria transition from individual to group behaviors. This allows precise coordination of virulence factors. The document examines quorum sensing in pathogenic bacteria like S. aureus, P. aeruginosa, and E. coli. It describes the autoinducer molecules and regulatory pathways that control virulence factors important for bacterial infection and pathogenesis.
Expansins are the small extracellular cell wall loosening proteins, which are universal in the plant kingdom and are also found in a set of phylogenetically diverse bacteria, fungi, and other organisms. It plays an important role in the physiological process requiring cell modification that loosens plant cell wall and cellulosic material without any lytic activity.
This document describes engineering a novel secretion signal (SS) that is capable of directing the secretion of recombinant proteins from both prokaryotes and eukaryotes. The researchers demonstrated secretion of fusion reporter proteins containing the SS in Escherichia coli, Saccharomyces cerevisiae and six different eukaryotic cell lines. They also showed estrogen-inducible secretion of fusion reporter proteins in six common eukaryotic cell lines. The SS allows flexible strategy for production and secretion of recombinant proteins in numerous hosts and rapid study of protein expression.
The biology of Aging in Insects From Drosphila to other insects and back.pptxArchana Ramanji
This particular presentation describes aging in insects and explains the mechanisms underlying it, particularly in Drosophila including eusocial insects.
This seminar discusses quorum sensing in bacteria and the potential to develop natural quorum sensing inhibitors from marine algae as anti-fouling agents. Quorum sensing allows bacteria to communicate and coordinate behaviors at high cell densities through signaling molecules. The speaker aims to screen marine algae for compounds that can inhibit quorum sensing and thereby prevent biofilm formation and fouling of marine structures. Inhibiting quorum sensing could provide a non-toxic alternative to toxic anti-fouling paints currently used.
1) The study examined the effects of probiotic supplementation with Lactobacillus paracasei or Lactobacillus rhamnosus on gut bacteria composition and host metabolism in humanized extended genome mice.
2) Probiotic exposure altered the gut microbiome and resulted in changes to hepatic lipid metabolism, lowered plasma lipoprotein levels, and stimulated glycolysis. It also impacted amino acid metabolism, methylamines, and short-chain fatty acid levels.
3) Multivariate analysis of metabolic profiles from multiple compartments, including biofluids, tissues, and cecal contents, provided a systems-level view of the host response to probiotic interventions. This integrated approach demonstrated how probiotics can
Quorum sensing in plant pathogenic bacteria. Maruthi.pptxMaruthiHpatil1
Quorum sensing allows bacteria to coordinate behaviors in response to cell population density. As bacteria increase in number, they produce and detect signaling molecules called autoinducers. This allows them to behave collectively and regulate behaviors like virulence factor production, biofilm formation, and conjugation. Quorum sensing is important for pathogenic bacteria to coordinate virulence and successfully infect hosts. It controls behaviors in both gram-positive and gram-negative bacteria through different autoinducer molecules and systems. Understanding quorum sensing provides opportunities to develop new antimicrobial strategies that target bacterial communication rather than growth.
Bacteria use quorum sensing to communicate via secreted signalling molecules called autoinducers. At high cell densities, autoinducers accumulate and bind receptor proteins to trigger expression of genes related to behaviors like bioluminescence and virulence factor production. Quorum sensing was first discovered in Vibrio fischeri by Nealson and Hastings in 1979. It allows bacteria to coordinate gene expression and behave as multicellular communities. Disrupting quorum sensing is a potential approach to inhibiting pathogenic bacterial infections and biofilms.
Mitochondria are organelles found in plant cells that provide energy and regulate important metabolic processes. Plant mitochondrial genomes vary significantly in size but generally encode proteins involved in oxidative phosphorylation as well as rRNAs and tRNAs. These genomes often contain introns, open reading frames, and chloroplast DNA sequences. Mutations in mitochondrial DNA can impact plant development and cause cytoplasmic male sterility. Expression of chimeric mitochondrial genes is associated with some cases of male sterility. Studies examine the role of mitochondrial proteins like uncoupling proteins and alternative oxidases in conferring stress tolerance in plants. The WA352 mitochondrial gene is implicated in cytoplasmic male sterility in rice through interaction with the nuclear-encoded protein COX11.
Great advances have been made in the past five decades in understanding the molecular mechanics of the two-component signal transduction pathway in bacteria but its applications in Medicine and Food Industries are yet to be fully unravelled. We discuss the varying changes in the extracellular environment of bacteria and their possession of multiple Two-Component Systems with each being specialize to react to a specific environmental signal, such as pH, nutrient level, redox state, osmotic pressure, quorum signals, and antibiotics. The sensitivity of this response transmits information between
different Two-Component Systems to form a complex signal transduction network. Bacteria’s signal transduction system, referred to as a two-component system, are essential for adaptation to external stimuli. These systems provides a signal transduction pathways widely employed from prokaryotes to eukaryotes. Typically, each two-component system composed of a sensor protein distinctively monitors an external signal(s) and a response regulator (RR) that controls gene expression and other physiological activities which are collectively assembled in a signal transduction pathway. This annex reviews the molecular mechanics underlying the signal transduction systems in prokaryotic organisms. It is not uncommon to hear, either explicitly or implicitly, the statement that “two component regulatory systems are well understood”. Therefore, we examine the current models of the mechanisms of the regulatory systems and provide viable suggestions to further expand its applications in drug efficiency and antibiotic resistance in humans as well as enhancing the shelf-life of products in the food
industry. We also outline the challenges that might have quenched possible trials of this application to human health.
Access to large-scale omics datasets i.e. genomics, transcriptomics, proteomics, metabolomics, phenomics, etc. has revolutionized biology and led to the emergence of systems approaches to advance our understanding of biological processes. With decreasing time and cost to generate these datasets, omics data integration has created both exciting opportunities and immense challenges for biologists, computational biologists, biostatisticians and biomathematicians. Genomics, transcriptomics, proteomics, and metabolomics together they help to bring out the best of characters in plants.
This document summarizes a study examining the effect of molecules secreted by the probiotic bacterium Lactobacillus acidophilus La-5 on the ability of enterohemorrhagic Escherichia coli O157:H7 (EHEC O157) to colonize the gastrointestinal tract. Fractions of L. acidophilus La-5 cell-free spent medium inhibited the ability of EHEC O157 to adhere to epithelial cells in vitro and reduced colonization of the gastrointestinal tract and fecal shedding in a mouse model. Certain fractions remarkably reduced attaching and effacing lesions in HeLa cells and significantly inhibited bacterial adhesion to Hep-2 cells. This suggests molecules from L. acid
This document describes the development of a genetically encoded fluorescent biosensor called QSflip that can detect the quorum sensing signal and autoinducer 3OC6HSL in real-time. The researchers constructed QSflip by fusing the 3OC6HSL-binding regulator protein LuxR from Vibrio fischeri between the FRET pair YFP and CFP. They demonstrated that QSflip could detect 3OC6HSL both in vitro and in vivo, with a detection limit of 100 μM. This biosensor provides a rapid, sensitive method for visualizing and quantifying 3OC6HSL without using bacterial reporter strains or high-performance liquid chromatography.
Manipulating bacterial cell fate via signal transductionarif810
This document discusses how bacteria sense and respond to surfaces. It describes different types of surface signals bacteria can detect, including osmolarity, chemicals, and mechanical signals. It also explains how bacteria use various structures and pathways to transduce these surface signals, such as extracellular appendages like flagella, transporters, sensor kinases, response regulators, and two-component signaling systems. While research has provided insights into these surface sensing mechanisms, key questions remain about how bacteria precisely detect mechanical forces and how signaling pathways interact and integrate multiple surface signals.
Majority of agronomic traits are quantitative and are controlled polygenetically.Instead of producing transgenic plants through single gene transfer many researchers are attempting on multigene engineering. The simultaneous transfer of multiple genes in to plants will enable us to produce plants with more desirable characters. Engineering of genes coding for complete metabolic pathways, bacterial operons or biopharmaceuticals that require an assembly of complex multisubunit proteins etc are some of the successful examples of multigene engineering.
This document summarizes a study that manipulated ascorbic acid (vitamin C) biosynthesis pathways in tomato (Solanum lycopersicum) plants by expressing three genes involved in ascorbic acid production. GDP-mannose pyrophosphorylase (GMPase) from yeast, arabinono-1,4-lactone oxidase (ALO) from yeast, and myo-inositol oxygenase 2 (MIOX2) from Arabidopsis thaliana were independently expressed in tomato under the control of a constitutive promoter. Expression of GMPase increased ascorbic acid levels up to 70% in leaves, 50% in green fruit, and 35% in red fruit.
This document discusses incorporating unnatural amino acids into proteins to expand their functions. It describes how pyrrolysine is used as an orthogonal system to incorporate unnatural amino acids specified by an amber stop codon. Various unnatural amino acids containing alkene and norbornene functional groups were successfully incorporated into GFP and other proteins in E. coli and mammalian cells. These modified proteins could then be site-specifically labeled using bioorthogonal reactions like the thiol-ene and Diels-Alder reactions. This allows proteins to be labeled and studied in live cells with new functions.
Similar to Bacterial Quorum Sensing In Dairy And Food Industry (20)
2. Dairy Technology Division,
ICAR - NDRI , Karnal
credit
Seminar on
QUORUM SENSING IN CONTEXT OF DAIRY AND
FOOD INDUSTRY
PRESENTED BY
SAMEER K. BHAGWAT
M.Tech. (1st year)
2
4. • ‘Quorum’ is the Latin word
• Means the minimum number of members of an assembly or society that
must be present at any of its meetings to make the proceedings of that
meeting valid
WHAT IS QUORUM SENSING(QS)??
4
5. Regulatory process:- To ensure the sufficient cell density before a
specific gene product is made
Cell–cell communication by unicellular microorganisms to co-ordinate
their activitiesand allows them to function as multi-cellular systems
Led to “Sociomicrobiology”
(Parsek and Greenberg, 2005)
5
6. HISTORY
First described
By Nealson in 1970
Vibrio fischeri
Bioluminescent bacterium
Symbiont in specialized light organs of the squid Euprymna scolopes and fish
Monocentris japonicas (Miller and Bassler, 2001)
6
7. BASICS ABOUT QUORUM SENSING
Bacterial showing quorum sensing requires two things:-
1. Signalling molecules called autoinducers or pheromones
1. A receptors that can specifically detect the signalling molecules
Bacterium
autoinducer
Receptor
autoinducer
Activates group
Behaviour genes
7
(Gobbettiet al., 2007)
o e.g. Acyl-Homoserine Lactone (AHL)
12. MECHANISM OF QUORUM SENSING
Acyl-Homoserine Lactone
(AHL) dependent
AutoinducerPeptide
(AIP) dependent
12
13. SIGNALLING MOLECULES
1) Autoinducer 1:
Major group:- Acyl homoserine lactones
Conserved homoserine lactone (HSL) ring with a acyl side chain
Provide variation and specificity for quorum-sensing communication in a mixed bacterial
population
N-butyryl-L-Homoserine lactone
(Shaw et al., 1997)
13
15. Autoinducing Peptides:-
Utilized by Gram-positive species
Modified peptides for cell to cell signalling
Exported via ATP- binding cassette (ABC)-type transporters
Oligopeptide synthesized by S.aureus
(Shaw et al., 1997)
15
16. 1) AHL DEPENDENT MECHANISM IN GRAM –VE BACTERIA
Autoinducers- acylhomoserine lactones
AHLs diffuses extracellular
and intracellular via passive
transport.
Concentration of these signaling molecules
exceed threshold value
Molecules are internalized in the cell and
activate particular set of genes in all bacterial
population
promoter
(https://openwetware.org/wiki/CH391L/S13/
QuorumSensing accessed on 14th April, 2018)
16
17. 2) AIP DEPENDENT MECHANISM OF QS IN GRAM +VE BACTERIA
Autoinducers:- polypeptides
Require specific peptide exporters
Bind to autoinducer receotors on the
surface of the bacterium
Critical level of oligopeptide is reached
Binding of the oligopeptide to its
Receptor
Starts a phosphorylation
Cascade
Activates DNA binding
transcriptional regulatory protein
(Response Regulators)
(https://www.researchgate.net/profile/Chong
_Lek_Koh, accessed on 15th April, 2018)
17
ATP
ADP
19. QS regulated traits include
Biofilm formation
Acid stress tolerance
Bacteriocin production
Competence adhesion
QS has been involved in the production of a number of
different fermented foods
Fermented fruits and vegetables
Sourdough
Dairy products
Wine
19
20. Food matrix Microorganisms QS system QS effect
Smear ripened
cheese
Gram positive
coryneforms and
staphylococci
AI-2 • AI-2 activity found in, C.
ammoniagenes, C. casei, M.
barkeri, M. gubbeenense, S.
equorum subsp.Linens
Smear ripened
cheese
Yeast PEOH, TOL,
TYR, FAR
• PEOH and TYR were produced by D.
hansenii
• PEOH, TOL, TYR and FAR influenced
adhesion and sliding motility
QS within microbial communities in fermented DAIRY foods
(Gori et al., 2011)
20
21. Smear ripened
cheese
Yeasts Ammonia • Ammonia was produced by D. hansenii, S.
cerevisiae, and G. candidum
Probiotics Probiotic LAB AI-2 • AI-2 activity found in L. rhamnosus
Probiotic LAB AI-2 • AI-2 activity found in L. rhamnosus,
L. salivarius, L. acidophilus and L. johnsonii
• AI-2 activity and transcription of luxS were
induced upon acid shock
(Gori et al., 2007)
21
22. Sourdough LAB AIP (Plantaricin) AIP produced by L. plantarum inhibited
L. sanfranciscensis and P. pentosaceus
Chinese fermented
meat
LAB AI-2 AI-2 activity found in L. plantarum and L.
sakei
Synthetic wine Yeast PEOH, TYR, TOL QS kinetics for S. cerevisiae correlated with
transcription of genes involved in PEOH,
TYR and TOL synthesis (ARO8, ARO9,
ARO10)
(Di Cango et al., 2009)
22
23. PROBIOTICS AND QUORUM SENSING
• Beneficial effects of probiotics through quorum sensing
• Symbiotic gut microorganisms release:- surface and exogenous proteins, nucleases,
peptides, fatty and amino acids etc.
• Able to sense environment
• Interact with corresponding cell surface, membrane, cytoplasm and nucleic acid
receptors
• Reply quickly and co-ordinately by induction of special sets of genes
• Supports stability of host genome
(Freitas et al., 2003)
23
24. • Production of ‘Modulins’
• Act directly on host cell functions
• Host cell biochemical pathways are specifically modified by these “modulins”
• The luxS gene: role in acidic stress response in probiotic lactobacilli easing their survival
in gut
(Moslehi et al., 2009)
24
25. QS and BACTERIOCIN PRODUCTION
Gram-positive lactic acid bacteria secrete antimicrobial peptides (AMPs) , regulated by QS
mechanisms
(Klaenhammer,1993)
Nisin: synthesised by Lactococcus lactis
Biosynthesis of nisin : the gene cluster nisABTCIPRKFEG
(Kleerebezemand Quadri, 2001)
Nisin synthesis
Early- to mid-logarithmic phase
Increases to a maximal production level in the early stationary phase when the highest cell
density is reached
(Kuipers et al., 1995)
25
27. SPOILAGE OF MILK AND MILK PRODUCTS
Serratia proteamaculans strainB5a
AHL based QS system
Spoilage of milk by Serratia spp.
(Christensen et al., 2003)
Psychrotrophic bacteria Pseudomonas spp., Enterobacter spp.
AHL based quorum sensing
Spoilage of milk and dairy products
(Whitfield et al., 2000)
Pseudomonas
Signal molecule hexanoyl homoserine lactone
Spoilage of fermented milks
(Shobharaniet al., 2010)
27
28. SPOILAGE OF FRUITS AND VEGETABLES
Erwinia and Pseudomonas
AHLs (mainly 3-oxo-C6-HSL and C6-HSL) mediated QS
Spoilage of ready-to-eat vegetables
(Pirhonen et al., 1993)
Pseudomonadaceae or Enterobacteriaceae (mostly Erwinia spp.)
High cell densities (108 - 109 CFU /mL)
Enzymatic browning, off-tastes, off-odors, and/or texture breakdown resulting in their spoilage
(Pirhonen et al., 1993)
S. marcescens and S.liquefaciens
Secretion of several unrelated and potentially food-quality-relevant proteins
• Lipase LipA
• Metalloprotease PrtA
• Surface-layer protein (S-layer) SlaA
(Riedel et al., 2001)
28
30. QUORUM SENSING INHIBITION
• Intense search of compounds to block AHL communication
Quorum-sensing inhibitors
Degrade signal molecules (Dong et al., 2000)
• Interfere with the receptor protein and the chemical signal
(Manfield et al., 1992)
• Halogenated Furanones produced by the Australian Red Algae (Delsea Pulchra)
(Givskov et al., 1996)
30
31. • Extract of vanilla beans in the C. violaceum effectively inhibited bacterial quorum sensing
(Choo et al., 2000)
• Natural furocoumarins from grapefruit juice act as the inhibitors of AI-1 and AI-2 activity in
S. typhimurium and P. aeruginosa
(Girennavar et al., 2008)
• Dietary phytochemicals from plants :-Quorum-sensing inhibitory activity at sublethal
concentrations
(Choo et al., 2000)
Orange extract enriched in O-glycosylated flavonones
Naringin, Neohesperidin,and Hesperidin
QS inhibitory capacity against C.violaceum
(Givskov et al., 1996)
31
32. CONCLUSIONS and future perspectives
Collective behaviour – cell to cell communication
Scientific phenomenon in most of the terminologies
Quality of the fermented food could be increased by QS modulation
Future emphasis is needed on studies related to multi-species or multi-kingdom
communities
Health benefits of QS molecules should be studied
For food spoilage prevention, study related to QS inhibition is needed
32