The document summarizes a study on the protein profiles of gamma ray irradiated blood stages of Plasmodium berghei, the malaria parasite, for developing a malaria vaccine candidate. Key findings include:
1) Protein profiles differed between infected and uninfected blood, indicating exported parasite proteins. Higher irradiation doses and dose rates resulted in more protein bands.
2) A dose of 150 Gy and dose rate of 380 Gy/hour altered protein profiles the most for vaccine development.
3) Protein profiles depended on parasite density in blood and differed between P. berghei and other rodent malaria species.
4) Profiles were unaffected by infection duration but depended on parasite composition in blood stages. Altered proteins could
Implications for Immunotherapy of Acute Radiation Syndromes.Dmitri Popov
This document discusses the effects of radiation on immune systems and antigenic properties of tissues. It provides background on how radiation can induce cell death and damage, triggering immune responses. Studies discussed show that radiation can change the antigenic composition and properties of tissues, making them more immunogenic. Radiation is found to increase antigen processing in tumor cells and increase their susceptibility to immune cell killing. The document examines how radiation affects the antigenic properties of both normal and tumor tissues.
Radiation protection: desensitization to radiation.Dmitri Popov
This document discusses radiation allergen immunotherapy, also known as desensitization or hypo-sensitization, as a treatment for acute radiation syndromes. It involves exposing patients to increasing amounts of radiation allergen in an attempt to change the immune system's response to high radiation doses. Specifically, it aims to induce tolerance to radiation by reducing IgE production and shifting the immune response away from humoral immunity toward cellular immunity. The objective is to develop tolerance to radiation in patients by altering radiation allergens through extensive irradiation or changes to specific amino acids.
Vaccine (L. vacca = cow) is a preparation/suspension or extract of dead/attenuated (weakened) germs of a disease which on inoculation (injection) into a healthy person provides temporary/permanent active/passive immunity by inducing antibodies formation.
Thus antibody provoking agents are called vaccines.
Radioimmunoassay (RIA) is an in vitro technique introduced in 1960 by Benson and Yalow to measure hormone levels in blood using antibodies. It involves the competitive binding of a radiolabeled antigen to antibodies. RIA is extremely sensitive and specific, requiring specialized equipment, but it remains one of the least expensive methods to perform such measurements, though it requires special precautions and licensing due to its use of radioactive substances. RIA is used to assay drugs, vitamins, and hormones like insulin, growth hormone, and thyroxin.
This document provides an overview of genetic toxicity testing guidelines. It discusses the history and aims of toxicity studies. Various in vitro and in vivo genetic toxicology tests are described, including tests for gene mutation, chromosomal abnormalities, and primary DNA damage. Key tests covered include the mammalian erythrocyte micronucleus test, mammalian bone marrow chromosomal aberration test, rodent dominant lethal assay, and mouse heritable translocation assay. The principles, procedures, and parameters of these tests are summarized. References on genetic toxicology guidance documents and studies are also provided.
This document provides an overview of genetic technology techniques including selective breeding, hybridization, DNA extraction, restriction enzymes, gel electrophoresis, polymerase chain reaction, genetic engineering, and transformation. It discusses applications like genetically modified animals and plants. Transgenic organisms created through recombinant DNA techniques are described. The document also touches on genome sequencing, biotechnology, cloning, and some products enabled by genetic technology.
Radioimmunoassay (RIA) is a sensitive technique introduced in 1960 to detect hormone levels in blood using antibodies and radioactive tracers. It represented the first invitro assay that could detect hormone levels and revolutionized research and clinical practice. RIA uses a radioactive label on the antigen or antibody to quantify its binding to antibodies or antigens, respectively, through competition. It allows for the detection of minute quantities of substances and is widely used in clinical diagnostics and research.
Implications for Immunotherapy of Acute Radiation Syndromes.Dmitri Popov
This document discusses the effects of radiation on immune systems and antigenic properties of tissues. It provides background on how radiation can induce cell death and damage, triggering immune responses. Studies discussed show that radiation can change the antigenic composition and properties of tissues, making them more immunogenic. Radiation is found to increase antigen processing in tumor cells and increase their susceptibility to immune cell killing. The document examines how radiation affects the antigenic properties of both normal and tumor tissues.
Radiation protection: desensitization to radiation.Dmitri Popov
This document discusses radiation allergen immunotherapy, also known as desensitization or hypo-sensitization, as a treatment for acute radiation syndromes. It involves exposing patients to increasing amounts of radiation allergen in an attempt to change the immune system's response to high radiation doses. Specifically, it aims to induce tolerance to radiation by reducing IgE production and shifting the immune response away from humoral immunity toward cellular immunity. The objective is to develop tolerance to radiation in patients by altering radiation allergens through extensive irradiation or changes to specific amino acids.
Vaccine (L. vacca = cow) is a preparation/suspension or extract of dead/attenuated (weakened) germs of a disease which on inoculation (injection) into a healthy person provides temporary/permanent active/passive immunity by inducing antibodies formation.
Thus antibody provoking agents are called vaccines.
Radioimmunoassay (RIA) is an in vitro technique introduced in 1960 by Benson and Yalow to measure hormone levels in blood using antibodies. It involves the competitive binding of a radiolabeled antigen to antibodies. RIA is extremely sensitive and specific, requiring specialized equipment, but it remains one of the least expensive methods to perform such measurements, though it requires special precautions and licensing due to its use of radioactive substances. RIA is used to assay drugs, vitamins, and hormones like insulin, growth hormone, and thyroxin.
This document provides an overview of genetic toxicity testing guidelines. It discusses the history and aims of toxicity studies. Various in vitro and in vivo genetic toxicology tests are described, including tests for gene mutation, chromosomal abnormalities, and primary DNA damage. Key tests covered include the mammalian erythrocyte micronucleus test, mammalian bone marrow chromosomal aberration test, rodent dominant lethal assay, and mouse heritable translocation assay. The principles, procedures, and parameters of these tests are summarized. References on genetic toxicology guidance documents and studies are also provided.
This document provides an overview of genetic technology techniques including selective breeding, hybridization, DNA extraction, restriction enzymes, gel electrophoresis, polymerase chain reaction, genetic engineering, and transformation. It discusses applications like genetically modified animals and plants. Transgenic organisms created through recombinant DNA techniques are described. The document also touches on genome sequencing, biotechnology, cloning, and some products enabled by genetic technology.
Radioimmunoassay (RIA) is a sensitive technique introduced in 1960 to detect hormone levels in blood using antibodies and radioactive tracers. It represented the first invitro assay that could detect hormone levels and revolutionized research and clinical practice. RIA uses a radioactive label on the antigen or antibody to quantify its binding to antibodies or antigens, respectively, through competition. It allows for the detection of minute quantities of substances and is widely used in clinical diagnostics and research.
Fulfillment an E-Archiving System for MENA CountriesIJSRED
This document describes an in silico analysis of Clostridium perfringens type D epsilon toxin to identify B cell epitopes and select optimal multiepitope fragments for vaccine development. The epsilon toxin sequence was obtained from databases and analyzed using various algorithms to predict linear and discontinuous epitopes. Three overlapping fragments were selected based on predicted epitope scores. Fragment 3 had the highest score for linear epitopes while Fragment 1 scored highest for discontinuous epitopes. Additional experimental validation is still needed to confirm the predicted epitopes and evaluate the fragments' potential as vaccine candidates.
Science and technology of manipulating and improving microbial strains, in order to enhance their metabolic capacities for biotechnological applications, are referred to as strain improvement.
Biotechnological applications in medicine can help mass produce therapeutic drugs through recombinant DNA technology. Around 30 recombinant therapeutics have been approved worldwide, with 12 marketed in India. Genetically engineered insulin is now produced through recombinant E. coli instead of extracted from animals, avoiding immune responses. Gene therapy aims to treat diseases like ADA deficiency by inserting normal genes to compensate for non-functional ones. Molecular diagnosis techniques like PCR, probes, and ELISA can detect pathogens at very low concentrations for early diagnosis. Transgenic animals with foreign genes help study diseases, produce biological products, and test vaccine and chemical safety.
This document discusses various genetic recombination techniques, including protoplast fusion, transformation, transduction, conjugation, and genetic engineering methods. It provides details on how each technique is performed, such as using polyethylene glycol or electric shocks to fuse protoplasts, adding calcium chloride to allow DNA uptake during bacterial transformation, and using restriction enzymes and ligases in genetic engineering to cut and join DNA fragments. The overall document serves to explain the key methods for combining genetic material from different organisms or cells.
1. There are two main methods of gene transfer - direct and indirect gene transfer. Indirect transfer uses Agrobacterium-mediated transformation while direct transfer uses physical or chemical methods.
2. Agrobacterium-mediated transformation uses Agrobacterium tumefaciens to transfer T-DNA containing the gene of interest into the plant genome. The process involves co-cultivation of plant explants with Agrobacterium followed by selection and regeneration of transgenic plants.
3. Direct physical methods include biolistic transformation, microinjection, electroporation, and macroinjection. Direct chemical methods include PEG-mediated, calcium phosphate co-precipitation, and liposome-mediated transformation
improved cultivation and metagenomics as new tools for bioprospecting in cold...Nicol Hormazabal
This document summarizes improved cultivation and metagenomic methods for bioprospecting in cold environments. Only a small percentage of microorganisms can typically be cultured using standard techniques, leaving much potential undiscovered. Improved cultivation methods aim to better mimic the natural environment, such as using diffusion chambers, hollow-fiber membrane chambers, and gel microdroplets to allow nutrient exchange while separating microbes. Metagenomic methods involve direct sequencing or functional screening of environmental DNA without cultivation. Both approaches can be combined, such as using DNA from enrichment cultures. Bioprospecting in cold environments faces additional challenges like low biomass and restricted access, requiring adaptation of methods.
Detection of Genetically modified plants and Organic Seed production.NSStudents
The Presentation is prepared by the N.S Institution of science, Markapur.
It consists of a basic introduction related to Detection of Genetically modified plants and Organic Seed production.
This document discusses applications of recombinant DNA technology in health, agriculture, environment, and industry. Some key points include:
- In health, recombinant DNA is used to produce insulin, human growth hormone, monoclonal antibodies, and vaccines. It also enables gene therapy and molecular diagnosis of diseases.
- In agriculture, it allows for developing stress-tolerant, herbicide-resistant, and insect-resistant plants. It can also increase crop yields and enable production of biopharmaceuticals in plants.
- In the environment, it aids in bioremediation of pollutants and development of biosensors to detect chemical contaminants.
- In industry, it facilitates production of primary metabolites, enzymes, and
ABSTRACT- Multiple Drug resistance (MDR) tuberculosis timely diagnose is of utmost clinical relevance and needs to be diagnose at initial stages for the proper treatment. The current study was done to detect the several genes for MDR tuberculosis (TB) in clinical isolates by molecular tools. 60 clinical isolates were collected and subjected for AFB smear preparation, Nested PCR (IS6110) for mycobacterium tuberculosis complex detection and MDR TB PCR targeting rpoB, kat G, mab A promoter. 12 came positive for AFB smears, out of which 08 were pulmonary and 04 were extra pulmonary. Nested PCR targeting IS6110 gene was amplified at 123 base pairs with 340 base pairs as IC (internal control) was seen in 25 cases which include 19 pulmonary and 6 extra pulmonary. The Positive TB PCR specimens were subjected for MDRTB PCR Only 06 cases yielded, an amplicon of 315 bp confirming the rpoB gene resistance for resistance for rifampcin drug. In any of the 06 positives none of the other resistance gene other than rpoB was amplified. Targeting multiple genes at once, additional information will be gained from a single test run that otherwise would require several times the reagents and more time to perform. Current study signifies the usage of quick, cost effective, DNA sequences based method for MDR TB detection where disease will be diagnosed earlier and hence treatment would be started at an early stage.
Keywords: Multiple drug resistance, amplicon, Polymerase chain reaction, Nested PCR, Rifampicin.
Strain improvement studies on L-aspaginase producing bacteriaSriramNagarajan17
This document summarizes strain improvement studies done on Bacillus cereus MS-6 to increase its production of L-asparaginase enzyme. The wild strain was subjected to UV radiation, yielding mutant MUV-9 with a 7.84-fold increase in enzyme activity. Further mutagenesis with NTG produced mutant MNTG-7 with a 12.04-fold increase versus the wild strain. EMS mutagenesis of MNTG-7 did not significantly improve enzyme activity beyond the parent strain. The strain improvement program resulted in a mutant strain producing over 12 times more L-asparaginase than the original wild strain.
SEROLOGICAL METHODS FOR DETECTION OF PLANT PATHOGENSHARISH J
This document discusses serological methods for detecting plant pathogens. It explains that serodiagnosis involves inducing an immune response in an animal to produce antibodies against a pathogen's antigens. These antibodies can then be used to detect the presence of the pathogen. The document describes several serological testing methods including ring interface tests, microprecipitin tests, double diffusion tests, ELISA, immunosorbent electron microscopy, and immunofluorescent staining. It concludes that serodiagnosis is a sensitive tool for identifying pathogens, detecting infections, and quantifying crop diseases.
The document provides an overview of DNA technology and biotechnology. It discusses how DNA cloning allows scientists to make multiple copies of genes and study their structure, expression, and function. Key techniques described include recombinant DNA, restriction enzymes, gel electrophoresis, and DNA sequencing. Applications mentioned include genetic engineering of plants, microorganisms, and animals for research, agriculture, medicine, forensics, and environmental cleanup.
Radioimmunoassay (RIA) is an in vitro assay technique used to measure concentrations of antigens using radiolabeled antibodies. It was developed in 1959 by Rosalyn Yalow and Solomon Berson for measuring insulin levels in plasma. RIA works by competitively binding radiolabeled antigen and unlabeled antigen to antibodies. The amount of bound versus unbound antigen is then measured to determine the concentration of antigen in a sample. RIA is a highly sensitive technique capable of detecting picogram quantities of antigens due to the specificity and high affinity of antigen-antibody binding.
The document discusses various methods for improving microbial strains, known as strain improvement. Strain improvement aims to enhance a microorganism's metabolic capacities for industrial purposes. Conventional methods include mutation, selection of mutants with desirable traits, and genetic recombination between strains. Modern techniques involve recombinant DNA technology, including transferring genes to produce recombinant proteins or modify metabolic pathways. The goal is to develop strains with ideal characteristics like rapid growth, genetic stability, and ability to use cheaper substrates. Strain improvement has various applications in producing vaccines, enzymes, and other industrial products.
This document discusses various techniques used to analyze transgenic plants, including PCR, Southern blotting, Northern blotting, Western blotting, ELISA, and strip tests. PCR can detect the presence of a transgene but not copy number. Southern blotting determines transgene integration sites and copy number by detecting DNA fragments after restriction enzyme digestion. Northern blotting analyzes relative transgene expression at the mRNA level. Western blotting and ELISA detect and quantify transgene protein production. Strip tests provide a rapid, qualitative method to detect transgene proteins. Together, these techniques allow analysis of transgenic plants at the DNA, RNA, and protein levels.
Moleecular mechanism of disease diagnosisjeeva raj
This document discusses molecular techniques for disease diagnosis, including antibody-based and nucleic acid-based methods. Antibody-based methods include using polyclonal and monoclonal antibodies in techniques like ELISA and lateral flow. PCR and RAPD are described as nucleic acid-based techniques that use primers and DNA amplification to detect pathogens. DNA microarrays are also mentioned as a diagnostic tool that screens for multiple pathogens by probing arrays of known DNA sequences.
Genetic engineering and Transformation methodsManjunath R
Genetic engineering involves manipulating an organism's genome using modern DNA technology. This document discusses various genetic transformation methods, including both direct and indirect methods. Indirect methods involve using Agrobacterium tumefaciens to transfer DNA into plant cells. Direct methods discussed include particle bombardment, polyethylene glycol treatment, electroporation, and microinjection. The document provides details on the process, mechanisms, applications and history of genetic engineering and transformation techniques.
IJERA (International journal of Engineering Research and Applications) is International online, ... peer reviewed journal. For more detail or submit your article, please visit www.ijera.com
IJERA (International journal of Engineering Research and Applications) is International online, ... peer reviewed journal. For more detail or submit your article, please visit www.ijera.com
Fulfillment an E-Archiving System for MENA CountriesIJSRED
This document describes an in silico analysis of Clostridium perfringens type D epsilon toxin to identify B cell epitopes and select optimal multiepitope fragments for vaccine development. The epsilon toxin sequence was obtained from databases and analyzed using various algorithms to predict linear and discontinuous epitopes. Three overlapping fragments were selected based on predicted epitope scores. Fragment 3 had the highest score for linear epitopes while Fragment 1 scored highest for discontinuous epitopes. Additional experimental validation is still needed to confirm the predicted epitopes and evaluate the fragments' potential as vaccine candidates.
Science and technology of manipulating and improving microbial strains, in order to enhance their metabolic capacities for biotechnological applications, are referred to as strain improvement.
Biotechnological applications in medicine can help mass produce therapeutic drugs through recombinant DNA technology. Around 30 recombinant therapeutics have been approved worldwide, with 12 marketed in India. Genetically engineered insulin is now produced through recombinant E. coli instead of extracted from animals, avoiding immune responses. Gene therapy aims to treat diseases like ADA deficiency by inserting normal genes to compensate for non-functional ones. Molecular diagnosis techniques like PCR, probes, and ELISA can detect pathogens at very low concentrations for early diagnosis. Transgenic animals with foreign genes help study diseases, produce biological products, and test vaccine and chemical safety.
This document discusses various genetic recombination techniques, including protoplast fusion, transformation, transduction, conjugation, and genetic engineering methods. It provides details on how each technique is performed, such as using polyethylene glycol or electric shocks to fuse protoplasts, adding calcium chloride to allow DNA uptake during bacterial transformation, and using restriction enzymes and ligases in genetic engineering to cut and join DNA fragments. The overall document serves to explain the key methods for combining genetic material from different organisms or cells.
1. There are two main methods of gene transfer - direct and indirect gene transfer. Indirect transfer uses Agrobacterium-mediated transformation while direct transfer uses physical or chemical methods.
2. Agrobacterium-mediated transformation uses Agrobacterium tumefaciens to transfer T-DNA containing the gene of interest into the plant genome. The process involves co-cultivation of plant explants with Agrobacterium followed by selection and regeneration of transgenic plants.
3. Direct physical methods include biolistic transformation, microinjection, electroporation, and macroinjection. Direct chemical methods include PEG-mediated, calcium phosphate co-precipitation, and liposome-mediated transformation
improved cultivation and metagenomics as new tools for bioprospecting in cold...Nicol Hormazabal
This document summarizes improved cultivation and metagenomic methods for bioprospecting in cold environments. Only a small percentage of microorganisms can typically be cultured using standard techniques, leaving much potential undiscovered. Improved cultivation methods aim to better mimic the natural environment, such as using diffusion chambers, hollow-fiber membrane chambers, and gel microdroplets to allow nutrient exchange while separating microbes. Metagenomic methods involve direct sequencing or functional screening of environmental DNA without cultivation. Both approaches can be combined, such as using DNA from enrichment cultures. Bioprospecting in cold environments faces additional challenges like low biomass and restricted access, requiring adaptation of methods.
Detection of Genetically modified plants and Organic Seed production.NSStudents
The Presentation is prepared by the N.S Institution of science, Markapur.
It consists of a basic introduction related to Detection of Genetically modified plants and Organic Seed production.
This document discusses applications of recombinant DNA technology in health, agriculture, environment, and industry. Some key points include:
- In health, recombinant DNA is used to produce insulin, human growth hormone, monoclonal antibodies, and vaccines. It also enables gene therapy and molecular diagnosis of diseases.
- In agriculture, it allows for developing stress-tolerant, herbicide-resistant, and insect-resistant plants. It can also increase crop yields and enable production of biopharmaceuticals in plants.
- In the environment, it aids in bioremediation of pollutants and development of biosensors to detect chemical contaminants.
- In industry, it facilitates production of primary metabolites, enzymes, and
ABSTRACT- Multiple Drug resistance (MDR) tuberculosis timely diagnose is of utmost clinical relevance and needs to be diagnose at initial stages for the proper treatment. The current study was done to detect the several genes for MDR tuberculosis (TB) in clinical isolates by molecular tools. 60 clinical isolates were collected and subjected for AFB smear preparation, Nested PCR (IS6110) for mycobacterium tuberculosis complex detection and MDR TB PCR targeting rpoB, kat G, mab A promoter. 12 came positive for AFB smears, out of which 08 were pulmonary and 04 were extra pulmonary. Nested PCR targeting IS6110 gene was amplified at 123 base pairs with 340 base pairs as IC (internal control) was seen in 25 cases which include 19 pulmonary and 6 extra pulmonary. The Positive TB PCR specimens were subjected for MDRTB PCR Only 06 cases yielded, an amplicon of 315 bp confirming the rpoB gene resistance for resistance for rifampcin drug. In any of the 06 positives none of the other resistance gene other than rpoB was amplified. Targeting multiple genes at once, additional information will be gained from a single test run that otherwise would require several times the reagents and more time to perform. Current study signifies the usage of quick, cost effective, DNA sequences based method for MDR TB detection where disease will be diagnosed earlier and hence treatment would be started at an early stage.
Keywords: Multiple drug resistance, amplicon, Polymerase chain reaction, Nested PCR, Rifampicin.
Strain improvement studies on L-aspaginase producing bacteriaSriramNagarajan17
This document summarizes strain improvement studies done on Bacillus cereus MS-6 to increase its production of L-asparaginase enzyme. The wild strain was subjected to UV radiation, yielding mutant MUV-9 with a 7.84-fold increase in enzyme activity. Further mutagenesis with NTG produced mutant MNTG-7 with a 12.04-fold increase versus the wild strain. EMS mutagenesis of MNTG-7 did not significantly improve enzyme activity beyond the parent strain. The strain improvement program resulted in a mutant strain producing over 12 times more L-asparaginase than the original wild strain.
SEROLOGICAL METHODS FOR DETECTION OF PLANT PATHOGENSHARISH J
This document discusses serological methods for detecting plant pathogens. It explains that serodiagnosis involves inducing an immune response in an animal to produce antibodies against a pathogen's antigens. These antibodies can then be used to detect the presence of the pathogen. The document describes several serological testing methods including ring interface tests, microprecipitin tests, double diffusion tests, ELISA, immunosorbent electron microscopy, and immunofluorescent staining. It concludes that serodiagnosis is a sensitive tool for identifying pathogens, detecting infections, and quantifying crop diseases.
The document provides an overview of DNA technology and biotechnology. It discusses how DNA cloning allows scientists to make multiple copies of genes and study their structure, expression, and function. Key techniques described include recombinant DNA, restriction enzymes, gel electrophoresis, and DNA sequencing. Applications mentioned include genetic engineering of plants, microorganisms, and animals for research, agriculture, medicine, forensics, and environmental cleanup.
Radioimmunoassay (RIA) is an in vitro assay technique used to measure concentrations of antigens using radiolabeled antibodies. It was developed in 1959 by Rosalyn Yalow and Solomon Berson for measuring insulin levels in plasma. RIA works by competitively binding radiolabeled antigen and unlabeled antigen to antibodies. The amount of bound versus unbound antigen is then measured to determine the concentration of antigen in a sample. RIA is a highly sensitive technique capable of detecting picogram quantities of antigens due to the specificity and high affinity of antigen-antibody binding.
The document discusses various methods for improving microbial strains, known as strain improvement. Strain improvement aims to enhance a microorganism's metabolic capacities for industrial purposes. Conventional methods include mutation, selection of mutants with desirable traits, and genetic recombination between strains. Modern techniques involve recombinant DNA technology, including transferring genes to produce recombinant proteins or modify metabolic pathways. The goal is to develop strains with ideal characteristics like rapid growth, genetic stability, and ability to use cheaper substrates. Strain improvement has various applications in producing vaccines, enzymes, and other industrial products.
This document discusses various techniques used to analyze transgenic plants, including PCR, Southern blotting, Northern blotting, Western blotting, ELISA, and strip tests. PCR can detect the presence of a transgene but not copy number. Southern blotting determines transgene integration sites and copy number by detecting DNA fragments after restriction enzyme digestion. Northern blotting analyzes relative transgene expression at the mRNA level. Western blotting and ELISA detect and quantify transgene protein production. Strip tests provide a rapid, qualitative method to detect transgene proteins. Together, these techniques allow analysis of transgenic plants at the DNA, RNA, and protein levels.
Moleecular mechanism of disease diagnosisjeeva raj
This document discusses molecular techniques for disease diagnosis, including antibody-based and nucleic acid-based methods. Antibody-based methods include using polyclonal and monoclonal antibodies in techniques like ELISA and lateral flow. PCR and RAPD are described as nucleic acid-based techniques that use primers and DNA amplification to detect pathogens. DNA microarrays are also mentioned as a diagnostic tool that screens for multiple pathogens by probing arrays of known DNA sequences.
Genetic engineering and Transformation methodsManjunath R
Genetic engineering involves manipulating an organism's genome using modern DNA technology. This document discusses various genetic transformation methods, including both direct and indirect methods. Indirect methods involve using Agrobacterium tumefaciens to transfer DNA into plant cells. Direct methods discussed include particle bombardment, polyethylene glycol treatment, electroporation, and microinjection. The document provides details on the process, mechanisms, applications and history of genetic engineering and transformation techniques.
IJERA (International journal of Engineering Research and Applications) is International online, ... peer reviewed journal. For more detail or submit your article, please visit www.ijera.com
IJERA (International journal of Engineering Research and Applications) is International online, ... peer reviewed journal. For more detail or submit your article, please visit www.ijera.com
IJERA (International journal of Engineering Research and Applications) is International online, ... peer reviewed journal. For more detail or submit your article, please visit www.ijera.com
IJERA (International journal of Engineering Research and Applications) is International online, ... peer reviewed journal. For more detail or submit your article, please visit www.ijera.com
This document summarizes a study analyzing the integrated land and watershed development of Dhobai Watershed in Dumka District, Jharkhand, India using GIS and geonomic analysis. The study aims to generate updated thematic information on natural resources to facilitate sustainable land and water management. Methodology included visual and digital interpretation of satellite imagery and topographical maps. Themes mapped included geomorphology, drainage, climate, soils, and land use/land cover. Geomorphological units identified include valleys, hills, and uplands. Drainage is dominated by the Dhobai River. Soils include Entisols, Inceptisols and Alfisols. Land use is primarily single
The document discusses the performance analysis of the MUSIC algorithm for direction of arrival (DOA) estimation using different antenna array configurations. It explores the MUSIC algorithm using a uniform linear array (ULA) and uniform circular array (UCA). Computer simulations were developed to evaluate the DOA performance of MUSIC based on ULA and UCA geometries. The performance obtained with both array configurations is analyzed through simulation results. A new proposed array geometry based on ULA is also presented and its performance is compared with ULA through simulation.
Juventude em marcha contra a violência dados oficiaisFabio Sexugi
Os principais pontos do documento são:
1) Muitos jovens brasileiros não completam o ensino fundamental e enfrentam altas taxas de analfabetismo e abandono escolar.
2) Os jovens têm altos índices de mortalidade por causas externas como homicídios, acidentes e AIDS, além de dependência ao álcool.
3) A violência, especialmente homicídios, afeta desproporcionalmente os jovens homens e existe grande desigualdade racial nessas estatísticas.
Planejamento e concepção de objetos educacionais hipermídia para educaçãoDelinea
Este documento discute o planejamento e concepção de objetos educacionais hipermídia para educação a distância. Ele destaca a importância de (1) uma equipe multidisciplinar, (2) um sólido planejamento pedagógico, e (3) testes com usuários-alvo para garantir a qualidade e eficácia dos objetos educacionais.
El romance es un poema narrativo tradicional que se popularizó en el siglo XV cuando comenzaron a recopilarse por escrito en colecciones llamadas romanceros. Los romances constan de octosílabos con rima asonante y tratan temas populares como la religión, la guerra y el amor. Se interpretan declamando o cantando de forma individual o entremezclada.
A turma TE1 preparou sumo de frutas. Eles espremeram maçãs, laranjas e morangos para fazer o sumo caseiro. Depois, provaram o sumo que fizeram e gostaram do resultado.
O documento descreve imagens de eventos realizados no Centro de Educação e Pesquisa do Oeste do Paraná (CEPOn). As fotos mostram atividades de extensão com a comunidade e eventos acadêmicos com alunos e professores participando de seminários e palestras.
El documento presenta las reglas básicas de la netiqueta para comunicarse adecuadamente en internet. Explica que la netiqueta son las normas de etiqueta para el ciberespacio. Recomienda evitar mayúsculas y palabras ofensivas, usar emoticones, estructurar bien los correos electrónicos y foros, y respetar las opiniones de los demás. También incluye una evaluación de participación en foros y las fuentes de consulta.
O documento resume o que é a Copa do Mundo de futebol, realizada na África do Sul em 2010 com 32 seleções divididas em 7 grupos. Diego Forlán é destacado como o melhor jogador da competição pela sua grande fase no Atlético de Madrid e na seleção uruguaia.
El documento explica las operaciones matemáticas combinadas con diferentes niveles de prioridad (sumas, restas, productos, divisiones, potencias) y el uso de paréntesis y corchetes. Explica cómo realizar las operaciones de mayor prioridad primero dentro y fuera de los símbolos de agrupación. Proporciona ejemplos resueltos paso a paso para ilustrar el proceso.
O documento convoca os eleitores a votarem de forma consciente e a rejeitarem candidatos incompetentes. Afirma que políticos como Tiririca e outros famosos não têm qualificações para cuidar de assuntos sérios e que afetam milhões de pessoas. Defende que precisamos de políticos sérios e competentes para melhorar o país.
El documento resume los fundamentos del conductismo y sus principales figuras como Pavlov, Thorndike, Watson y Skinner. Explica brevemente el experimento de condicionamiento clásico de Pavlov con perros, el experimento de Thorndike sobre estímulo-respuesta, el experimento de Watson condicionando miedo en un niño y aporta enlaces de video para cada uno. También menciona brevemente a Skinner y provee referencias al final.
El documento habla sobre diferentes tipos de aprendizaje electrónico como el m-learning, u-learning y web-learning. El m-learning combina el e-learning con la computación móvil para crear una nueva forma de educación accesible desde cualquier lugar. El u-learning también es accesible en cualquier momento y lugar a través de dispositivos como televisión, computadora o celular. El web-learning se basa en las tecnologías de la información y la comunicación para proveer educación a distancia y sin límites geográficos o de tiempo.
Este documento fornece instruções sobre a operação e manutenção de uma máquina de limpeza de pisos. Ele inclui informações sobre componentes, instalação, operação, manutenção e peças de reposição, com diagramas e listas de peças.
Este documento presenta 13 ejercicios de cálculo de límites utilizando diferentes métodos como el método δ-ε, evaluación directa cuando la función es continua en el punto de interés, y factorización cuando la función no es definida en dicho punto. Los ejercicios cubren una variedad de funciones y puntos límite para ilustrar los conceptos fundamentales involucrados en el cálculo de límites.
Este documento trata sobre ondas sonoras. Explica que las ondas sonoras son ondas mecánicas de compresión que viajan a través del aire y otros materiales con frecuencias entre 20 Hz y 20 kHz. Las ondas de sonido pueden describirse en términos de variaciones en la presión del aire o en el desplazamiento de las moléculas de aire. Deriva la ecuación de ondas para el sonido y muestra que la velocidad de propagación de las ondas de sonido depende de la presión y la dens
The document describes a study that used functional genomics to discover the molecular basis of colistin resistance in Shewanella algae MARS 14. Researchers constructed a genomic expression library of S. algae MARS 14 in E. coli and screened it to select clones resistant to colistin. Sequencing of the resistant clones identified a unique gene, ethanolamine phosphotransferase (EptA), in all clones. EptA overexpression was found to confer colistin resistance by modifying LPS and increasing 27-fold in expression in S. algae MARS 14.
MVI is working with ICGEB in India to develop a vaccine against Plasmodium vivax. This effort includes Bharat Biotech, which will manufacture the vaccine for preclinical and initial safety trials in adults. The vaccine aims to prevent infection, decrease infection intensity, and prevent malaria transmission.
Paratuberculosis (PTB) remains one of the most obstacles limit animal breeding sector all over the world. The current study aimed to detect the etiology of PTB in tissues of clinically suspected small ruminants using histopathological and real-time polymerase chain reaction (RT-PCR) methods. Clinical examination showed 10 (26.4%) PTB suspected cases out of the total (38) examined animals. The suspected cases were euthanized, necropsied, gross lesions were recorded and tissue samples were collected for histopathological and molecular procedures. Grossly intestinal and mesenteric lymph nodes thickening, corrugations and edematous swellings were recorded. Semi-thin sections of the intestine and mesenteric lymph nodes stained with toluidine blue demonstrated MAP organism inside epithelium cells and macrophages. RT-PCR detected MAP IS900 gene in all suspected cases (100%), thus we recommend using RT-PCR as a rapid sensitive method in the diagnosis of PTB.
Key-words: Paratuberculosis, Mycobacterium, Semi thin sections, Toluidine blue, IS900 gene
— We performed analysis of the biological properties of African swine fever virus (ASF) isolate Odintsovo 02/14. Domestic pigs were inoculated with 50 (low) or 5000 (high) hemadsorbing doses (HAD) of the virus via intranasal (IN) or intramuscular (IM) routes, to investigate the pathogenesis of ASF virus Odintsovo 02/14 isolate. Our results indicated that filtered 10% spleen suspension of ASFV isolate Odintsovo 02/14 induced an acute disease in pigs, resulting in 100% mortality rate. For cultural viral suspension (3rd passage), produced in a PBM cells mortality rate was 85.7%. We also present an analysis of the complete genome of African swine fever virus (ASF) Odintsovo 02/14 isolate. It is 189 333 nucleotide long and contains more than 160 open reading frames (ORFs). Complete nucleotide sequence of the genome of Odintsovo 02/14 isolate was obtained using pyrosequencing method and used to determine differences between the nucleotide sequences in the genomes of Odintsovo 02/14 and Georgia 01/2007. The genome of ASF virus Odintsovo 02/14 contains substitutions, insertions and deletions in genes encoding structural, membrane, and regulatory proteins, DNA reparation enzymes, host immune response evasion proteins, and MGF genes. The intergenic region I73R/I329L of Odintsovo 02/14 isolate contains 10-nucleotide long tandem repeat sequence, missing in Georgia 01/2007. Keywords— African swine fever (ASF), experimental challenge, complete genome sequencing, intergenic region, tandem repeats.
This document summarizes a study that investigated the larvicidal effects of Aegle marmelos (bael tree) leaf extracts on Aedes aegypti mosquitoes. Specifically, it assessed the efficacy of methanol extracts from A. marmelos leaves in killing A. aegypti larvae (at the third instar stage) and altering their midgut proteins. The study found that the leaf extract achieved 50% larval mortality (LC50) at a concentration of 49 ppm. Proteomic analysis of larval midguts revealed changes in protein expression levels after exposure to the extract, suggesting its bioactive compounds can disrupt the midgut. The aim is to identify specific inhibitor proteins in the midg
1. The document summarizes biomedical research activities at the Ifakara Health Institute (IHI) in Tanzania, including past and current laboratory-based research in malaria, tuberculosis, HIV, and other infectious diseases.
2. Key areas of research mentioned include monitoring anti-malarial drug resistance, evaluating malaria vaccines and biomarkers, population genetics of malaria vectors, and molecular monitoring of HIV drug resistance.
3. Future research directions discussed are non-communicable diseases, genetic determinants of infectious diseases, mapping and characterizing pathogens/emerging pathogens, drug efficacy monitoring, gene expression profiling, diagnostic development, and understanding pathogen co-infections. The document highlights strengths like laboratory facilities, clinical trial platforms,
This document describes a study examining a synthetic small molecule analogue (SMA-12b) of an immunomodulatory parasitic worm product (ES-62) and its ability to treat experimental arthritis. The key findings are:
1) SMA-12b prevents and treats collagen-induced arthritis in mice by modifying the expression of inflammatory genes, particularly inhibiting IL-1β production.
2) SMA-12b increases the expression of antioxidant response genes regulated by the transcription factor NRF2.
3) SMA-12b is unable to inhibit IL-1β expression in macrophages derived from NRF2-deficient mice, suggesting it acts through NRF2-mediated mechanisms.
This document summarizes a study that evaluated the use of a recombinant Toxoplasma gondii surface antigen 1 (SAG1) for the serodiagnosis of acute and chronic Toxoplasma infections in humans. The researchers cloned the SAG1 gene from T. gondii genomic DNA and expressed the recombinant protein in E. coli. They then used the recombinant SAG1 antigen in ELISA tests to detect IgM and IgG antibodies in human sera, comparing it to a commercial ELISA kit. The recombinant SAG1 ELISA showed 93% sensitivity and 95% specificity for IgG detection, and 87% sensitivity and 95% specificity for IgM detection, demonstrating its potential as a diagnostic tool for toxoplasmosis
TOXICOLOGY STUDY IS VERY ESSENTIAL FOR DRUG DISCOVERY. INTERNATIONAL COUNCIL FOR HARMONIZATION (ICH) HAS IMPLEMENTED SOME BASIC RULES AND REGULATION REGARDING THE TOXICITY STUDY ON ANIMAL DURING PRE-CLINICAL TRIAL, WHICH IS A PART OF DRUG DISCOVERY PROCESS. HERE SOME OF THE BASIC TEST ARE DISCUSSED ALONG WITH SOME BASIC CONCEPTS OF GENETICS. HOPE THIS WILL HELP THE STUDENTS TO UNDERSTAND THE TOPIC.
This study investigated the effects of antioxidant supplementation on lipid profiles and hematological parameters in malaria-induced albino rats. Rats were infected with malaria parasites and treated with anti-malarial drugs. They were divided into three groups: Group A received antioxidants (foods), Group B received nutraceuticals, and Group C served as the control. After 12 weeks, hematological parameters like PCV, WBC, RBC, and HGB significantly increased more in Groups A and B compared to Group C. Lipid levels like TG and LDL also significantly increased more in Groups A and B versus Group C. However, CHOL and HDL levels non-significantly decreased more in Groups A and B versus Group C.
Washington Global Health Alliance Discovery Series
Robert Sinden, PhD
July 28, 2008
'Understanding Malaria Development in the Mosquito, and its Pivotal Role in the Formulation of Effective Control Strategies'
Target validation of the inosine monophosphate dehydrogenase (IMPDH) gene in ...Therese Horn
This document summarizes research using a yeast-two hybrid system and Phylomer peptide library to identify peptides that interact with and potentially inhibit the inosine monophosphate dehydrogenase (IMPDH) enzyme in Cryptosporidium. IMPDH is a potential drug target as Cryptosporidium relies solely on purine salvage and IMPDH is essential for DNA synthesis. A Phylomer peptide library was screened against IMPDH from C. parvum and C. hominis, identifying 38 unique interacting peptides. 12 peptides were synthesized and 2 showed significant growth inhibition of C. parvum in vitro. One peptide consistently interacted with C. parvum and C. hominis IMPDH but not human
Arif Jamal Siddiqui is currently a postdoctoral research associate at Texas Tech University Health Science Center in Lubbock, Texas. He received his PhD in biological sciences from the Academy of Scientific and Innovative Research in New Delhi, India. His research focuses on immunology, molecular cell biology, and drug discovery for diseases like malaria and schistosomiasis. Currently, he is working on developing vaccines for schistosomiasis using the Sm-P80 vaccine in baboons.
This document describes a study that analyzed the transcriptome of the gut epithelium in Helicoverpa zea (corn earworm) larvae 24 hours after being infected with Helicoverpa zea single nucleopolyhedrovirus (HzSNPV) or a mock treatment. The study found 1,139 genes were differentially expressed between the two groups, with 63% downregulated and 37% upregulated in infected larvae. Genes related to digestion, detoxification, and some immune responses like viral recognition were generally downregulated upon infection, while antimicrobial peptides and prophenoloxidase were upregulated. This provided insight into how baculovirus infection alters gene expression in the gut, likely the most heavily
Prevalence Study of Infectious Bovine Keratoconjunctivitisin Dairy cattle und...iosrjce
IOSR Journal of Agriculture and Veterinary Science (IOSR-JAVS) is a double blind peer reviewed International Journal edited by the International Organization of Scientific Research (IOSR). The journal provides a common forum where all aspects of Agricultural and Veterinary Sciences are presented. The journal invites original papers, review articles, technical reports and short communications containing new insight into any aspect Agricultural and Veterinary Sciences that are not published or not being considered for publication elsewhere.
The document summarizes preliminary research toward developing a method for stably transfecting the malaria parasite Plasmodium vivax. The researchers tested various transfection conditions and found the highest parasite survival rates using the Amaxa Nucleofector program U-033 and pre-loading erythrocytes with DNA. However, no fluorescent parasites were observed, likely due to the low efficiency of Plasmodium transfection. Future work aims to increase parasite numbers for transfection and further optimize methods.
This document summarizes a seminar on the role of effectors in plant-fungal interactions. It discusses how fungi secrete effectors to suppress plant immunity and facilitate infection. Effectors can target the plant apoplast or cytoplasm. Apoplastic effectors inhibit antifungal enzymes and proteins or suppress chitin-triggered immunity. Cytoplasmic effectors interfere with hormone signaling or alter protein stability. The seminar also examines how plants have evolved resistance proteins that recognize specific effectors. Effectoromics uses high-throughput screening of effectors to identify new plant resistance genes and their corresponding fungal avirulence genes.
This document discusses various laboratory diagnostic techniques for parasitic infections. It begins by noting that light microscopy remains the standard for diagnosis of most parasites, but nucleic acid tests are becoming more popular. Immunological diagnosis using techniques like ELISA and rapid diagnostic tests (RDTs) have advantages like speed and ease of use. The document then examines specific techniques for diagnosing various parasites like malaria, cryptosporidiosis, amoebiasis, trichomoniasis, lymphatic filariasis, and leishmaniasis. It discusses advantages and limitations of different antigen and antibody detection methods.
1. Mukh Syaifudin, Devita Tetriana, Darlina,Siti Nurhayati / International Journal of Engineering
Research and Applications (IJERA) ISSN: 2248-9622 www.ijera.com
Vol. 3, Issue 1, January-February 2013, pp.314-319
Studies On The Protein Profiles Of Gamma Ray Induced Blood
Stage Of Plasmodium berghei For Developing Candidate Of
Malaria Vaccine
Mukh Syaifudin1, Devita Tetriana1, Darlina1 and Siti Nurhayati1
1. Center for Technology of Radiation Safety and Metrology, National Nuclear Energy Agency, Jl. Lebak bulus
Raya No. 49 Jakarta Selatan INDONESIA
ABSTRACT
Ionizing radiation is a known physical responses to the parasite are directed at stage-
agent that had been widely used to attenuate the specific antigens. Proteins expressed at different
invasive blood stage of malaria parasite, stages of the life cycle of Plasmodium sp. are likely
merozoite, in vaccine materials development. In to be involved in the generation of natural immunity
this study, we determined the protein profiles of to malaria and a number of these proteins have been
blood stage Plasmodium berghei of ANKA strain highlighted as candidates for a subunit vaccine [2].
post gamma irradiation. Parasitized bloods Vaccines that mimic the antigenicity of infectious
obtained from various percentage of parasite organisms may ultimately prove to be the most
density, days post infection, doses (125, 150 and effective strategy for achieving protective immune
175 Gy) and dose rates (380.2 and 640.4 Gy/hour) responses [3,4]. Injection with radiation-attenuated
of gamma ray for irradiation and species of parasites induces sterile immunity and protects
rodent parasites were separated on 10% SDS- >90% of human recipients for more than 10 months
PAGE gels under reducing conditions after [5]. Studies in animal models also demonstrate that
boiled for 5 minutes. We found that protein intravenous injection of mice with attenuated
profile of infected blood was different from Plasmodium berghei induces sterile immunity to
uninfected blood with higher number of bands in challenge with viable parasites [6,7].
infected samples indicating some exported Since clinical symptoms of malaria
proteins to the host cells for pathology in manifest only during the blood stage, a vaccine
parasitized erythrocyte. Higher dose and dose against this stage of the parasite life cycle would
rate of irradiation resulted in more protein bands prevent or reduce severity and complications of the
on acrylamide gel. Based on further analysis 150 disease, and perhaps eliminate malaria if sterile
Gy and 380 Gy/hour was the most appropriate immunity could be achieved. Much attention has
dose and dose rate to develop vaccine candidate. therefore been given to parasite molecules that
There was no difference in protein profiles of non interact with the host cells during red blood cell
irradiated parasited blood in days post infection, (RBC) invasion as potential targets of host immune
however the profile was depended on the responses. A number of proteins have been
percentage of parasitemia. Protein concentration identified on the merozoite surface or in the apical
that was analyzed by Lowry method was organelles that play a role in RBC invasion and are
decreased with increasing of irradiation dose. thought to be targets of immunity [8]. Merozoites,
Protein profile of P. berghei was different with which are the extracellular developmental form of
those of other species of rodent plasmodia. It is the parasite that invade erythrocytes, expose on their
concluded that profile of protein was dependent surface a protein complex, which is the processed
on the percentage of parasitemia i.e. depended on product of a 190-200 kDa precursor known as
the composition of parasite’s life cycle stages, and merozoite surface protein-1 (MSP-1) [9]. One of
dose and dose rate of irradiation. Protein profile cell components affecting parasite virulence factors
was also affected by some technical factors that is proteins. These proteins are also can be used as
will be discussed furthermore in the paper. candidate of malaria vaccine [10,11].
Irradiation produces some chemical
Keywords : gamma rays, malaria vaccine, P. changes, which, although lethal to living organisms
berghei, protein profile, SDS-PAGE like malaria parasites, lead to the production of
small amounts of radiolytic products [12]. They are
INTRODUCTION formed from biopolymers like the proteins and are
Malaria remains the most prevalent the result of reactions with hydroxyl radicals and
devastating parasitic disease worldwide. With the hydrated electrons generated from water molecules
widespread development of drug resistance in the by gamma rays. Free radicals may cause breaks in
parasite, vaccination is considered to be an approach the protein chains or changes in their secondary or
that will complement other strategies for prevention tertiary structure, resulting in modifications of their
and control of the disease in future [1]. It has physicochemical properties such as fragmentation,
become well established that protective immune crosslinking and aggregation [13]. However, the
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2. Mukh Syaifudin, Devita Tetriana, Darlina,Siti Nurhayati / International Journal of Engineering
Research and Applications (IJERA) ISSN: 2248-9622 www.ijera.com
Vol. 3, Issue 1, January-February 2013, pp.314-319
knowledge on the alteration of protein profile of SDS-PAGE electrophoresis. SDS-PAGE was
parasites after irradiation is still limited and it is performed according to the method of Laemmli,
needed to study the vaccine efficacy. These changes 1970 [14] and Theisen [15] to the following group
can be confirmed by sodium dodecyl sulphate- of samples : doses and dose rates of gamma ray for
polyacrylamide gel electrophoresis (SDS-PAGE). irradiation of P. berghei, and other species of rodent
parasites (P. yoelii), and days post infection and
percentage of parasite density for non irradiated
MATERIALS AND METHODS parasites. It was carried out on Bio-Rad gels
Parasites and mouse. Plasmodium berghei (strain composed of stacking gel (5% w/v) using 1.0 M
Antwerpen-Kasapa, ANKA) and P. yoelii infected Tris-glycine buffer containing 0.4% SDS at pH 6.8
mouse bloods were received from Eijkman Institute and resolving gel (12%, w/v) using 1.5 M Tris-
for Molecular Biology, Indonesian Ministry of glycine buffer containing 0.4% SDS at pH 8.8.
Research and Technology and National Institute of Protein sample was dissolved in phosphate buffer (5
Health Research and Development, Indonesian mg/ml) and mixed with a solubilization buffer Tris-
Ministry of Health. Male Swiss-Webster mice (6–8 HCl 6.22 mμ (pH 6.8) which contains 2% (w/v)
weeks old) were purchased from National Institute SDS, 50% glycerol, a pinch of bromophenol blue
of Health Research and Development, Indonesian and reduced with 0.9 mμ 2-mercaptoethanol in
Ministry of Health and were housed at the boiling water for 5 min. Protein sample was loaded
Biomedical Laboratory of The Center for onto each well and electrophoresis (Bio-Rad
Technology of Radiation Safety and Metrology, Laboratories, Hercules, CA) was conducted at
National Nuclear Energy Agency of Indonesia constant current of 100 volts for 90 minutes by a
(BATAN) animal facility and handled according to Bio-Rad electrophoresis constant power supply unit.
institutional guidelines. All procedures were A standard broad range of protein marker was also
reviewed and approved by the Animal Care and Use run into every gel. After electrophoresis, gels were
Committee National Institute of Health Research stained with Commassie-250 blue solution for one
and Development, the Indonesian Ministry of night after being treated with fixing solution
Health. (methanol-acetic acid-H2O-p-formaldehyde) for 1
hour and photographed with Gel-doc imaging
Infection of mouse. Mice were intraperitoneally system (Bio-rad).
(IP) injected with about 1 x 106/ml P. berghei
parasitized blood and control mice were sham Determination of protein concentration with
injected with uninfected blood. Each batch consisted Lowry methods. After irradiated with gamma rays
of equal numbers of infected and control mice. at 150-200 Gy, the content of protein was
Parasitemia was monitored by Giemsa-stained blood determined according to Lowry method [16]. The
smears using light microscopy. Parasitemia and blood sample was digested by dissolving it in
survival of mice were evaluated. Mice were acetone (1:1) and sonicated for 15 minutes. Five
sacrificed at days post-infection to harvest blood, milliliter of Lowry solution I was added into 1 ml of
liver and spleen for further analysis. sample and let stand for 10 minutes and followed by
the addition of Lowry solution II and incubated in
Parasitemia monitoring. Parasitemia in mice from room temperature for 30 minutes. After that it read
each infected group were monitored daily by with spectrophotometer at wave length of 700 nm.
conventional Giemsa staining starting on day 3 after
infection. Thin blood films were prepared by tail RESULTS AND DISCUSSION
bleeding, air dried, and methanol fixed before Results of experiment showed that on SDS-
staining. Staining was done with a 10% Giemsa PAGE gels, there were a difference in the protein
solution for 10 minutes at room temperature. Slides profile between control blood (uninfected blood)
were evaluated at a 1000× magnification (oil- and infected blood. Based on analysis with Geldoc-
immersion) using a Nikon E200 Eclipse microscope Image software it was known that infected blood
by reading 20 fields per slide. contained more bands of protein compared to
uninfected blood that showing parasites protein
Irradiation of blood stage parasites. Infected inside the blood or indicating some exported
bloods of mouse with 20-25% parasitemia were proteins to the host cells for pathology in parasited
irradiated in vivo within a gamma irradiator (Cobalt- erythrocyte (Figure 1). Irradiation caused the
60 of IRPASENA) of the Center for Application of alteration of protein profile in infected blood but
Isotope and Radiation, BATAN to a dose of 0, 125, there was no significant difference among
150 and 175 Gy at a low dose rate (380.0 Gy/hour) irradiation doses of 125, 150 and 175 Gy where
and high dose rate (640.0 Gy/hour). Radiation dose several new bands appeared after irradiation.
was calculated from the machine specific estimate Irradiation with 150 Gy altered protein profiles
of 1505 Rads per minute. where the 15 kDa protein was not appeared but there
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3. Mukh Syaifudin, Devita Tetriana, Darlina,Siti Nurhayati / International Journal of Engineering
Research and Applications (IJERA) ISSN: 2248-9622 www.ijera.com
Vol. 3, Issue 1, January-February 2013, pp.314-319
was no different protein profiles found at higher 175L) and high (125H, 150H, 175H) dose rates.
dose (175 and 200 Gy). Std : standard marker.
There was a difference in protein profiles
between species of rodent Plasmodium examined. There was no difference in protein profiles
Profile of protein in blood was depended on the in days post infection (Figure 3), even though there
percentage of parasite in red blood cells were some stages of parasites during its
(parasitemia) and depends on irradiation dose rate. development (rings, tropozoites and schizonts)
This protein can be used as vaccine candidate by based on microscopy observation. It will be more
determining molecular weight and extract them with clearly if the samples were further analyzed such as
blotting method. Profile of protein is influenced by two-dimensional differential in-gel electrophoresis
several factors such the stability of electrical voltage (2D-DIGE) protein quantification.
used during electrophoresis and condition of the
samples itself and SDS gels.
M K-1 0 150 125 175 0 150 175
Figure 1. Profile of protein in blood of mouse
Figure 3. Protein profiles of non irradiated P.
infected with P. berghei post irradiation. M :
berghei in days post infection into mouse.
broad range standard marker with numbers
showing molecular weight of 22, 31, 45, 66 and 97
Study on the protein profile of several
kDa. K-1 : non infected blood.
percentages of parasitemia in infected mouse blood
Higher dose and dose rate of irradiation showed that profile of protein was dependent on the
resulted in more protein bands on acrylamide gel. percentage of parasitemia i.e. depended on the
composition of parasite’s life cycle in blood stages.
Based on further analysis 150 Gy and 380 Gy/hour
The profiles of proteins of P. berghei infected
was the most appropriate dose and dose rate to
mouse blood are quite different among 0%, 1% and
develop vaccine candidate (Figure 2). Results of
experiment on the protein profile post irradiation of 10% samples analyzed (Figure 5). The higher
number of bands is seen in 1% sample that probably
low and high dose rates showed that new bands with
the size of 77 and 105 kiloDalton (kDa) were due to higher number of stage of life cycle of
parasites whether rings, trophozoites or schizonts in
observed after irradiation with higher dose rate for
that sample when it was taken.
doses of 150 dan 175 Gy. It was predicted that
merozoite surface protein-1 (MSP-1) with size of 26
kDa (p26) was detected for all samples.
125L 150L 175L 125H 150H
175H M k
D
a
Figure 5. Profile of proteins in P. berghei infected
Figure 2. Protein prifile of mouse blood infected mouse blood at different percentages of
with P. berghei post gamma irradiation of doses parasitemia. M: standard protein marker of
125, 150 dan 175 Gy at low (125L, 150L dan broad range.
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Research and Applications (IJERA) ISSN: 2248-9622 www.ijera.com
Vol. 3, Issue 1, January-February 2013, pp.314-319
Protein profile of P. berghei was different with In developing countries malaria is currently believed
those of other species of rodent plasmodia. There to be the third most common cause of death among
were some protein bands seen in SDS page of P. children, after deaths from respiratory infections and
yoelii (35, 36 and 60 kDa) (Figure 6) that was not diarrheal diseases. It means that malaria is the one
found in P. berghei. of the most important parasite diseases in the world.
The research and development of cost-effective
deployable vaccine will be needed to facilitate
eradication of malaria [17]. However, the number of
vaccine against protozoan diseases, malaria, is still
limited. Despite this there is the belief that a vaccine
against malaria is both practical and possible [18].
In developing a vaccine that could be used against
malaria, we have attempted to produce explore the
protein profile of irradiated blood of mouse that
subjected to SDS-PAGE under reducing conditions.
The alteration of intensity (concentration)
of protein may be caused by the damage that
induced by radiation such as gamma rays, either its
structure or its peptide bonds. The structural
alteration can be caused by denaturation or
degradation of protein or DNA alteration. This DNA
Figure 6. Profile of protein of P. yoelii (another alteration may cause the increase in synthesis of
rodent parasite) post gamma irradiation. M : certain protein or the production of new protein.
standard marker; Row 1 : 0 Gy, 2 : 125 Gy, 3 : Denatured protein would have two possibility
150 Gy and 4 : 175 Gy. Notes : kDa is unit of impacts, the development of peptide bonds and the
molecular weight of protein. Protein of 35, 36 breakage of protein into smaller pieces without
dan 60 kDa were predicted as merozoite surface molecular development. These two denaturations
protein (MSP) of P. yoelii. are depends on molecular condition. First, it
occurred in polypeptide bonds, while the second is
Protein concentration was analyzed occurred in molecular parts that bind to secondary
according to procedures of Lowry method. bond. The degradation of protein may cause its
Irradiation with different doses on P. berghei of function as protein and structural degradation may
erythrocytic stadium showed the alteration of total resulted from the lost of side group [19].
protein concentration (Figure 6). Concentration of A critical focus of vaccine development
protein was decreased according to the increase of process has been to determine the minimum dose of
irradiation dose. Concentration of total protein for radiation that adequately attenuates all parasites, and
dose of 150 Gy was 435 mg/ml and for dose of 200 thus ensures that the vaccine will not cause malaria
Gy was 315 mg/ml. It was predicted that irradiation [20]. Thus the dose of radiation used to attenuate
caused the splitting of protein (peptide) bonds. plasmodium is the most crucial factor. To determine
Statistical analysis showed that there was an the dose of gamma-irradiation which will produce
influence on the protein concentration. attenuated parasites without affecting the pre-
erythocytic and erythrocyte stabilities is the ultimate
goal of many studies on irradiation vaccine. When
600 dosed adequately, the parasite survives and remains
infectious to the hepatocyte. However, liver stage
500
Protein concentration
development terminates during early hepatocyte
400 infection [21]. The safety and efficacy of irradiated
parasites is dependent on a precise irradiation dose;
(mg/ml)
300 too little irradiation allows the parasite to complete
liver stage development and cause blood-stage
200 infection, too much irradiation completely
inactivates the parasites, and inactivated parasites do
100 not induce significant protection.
SDS-PAGE is a method used to analyze
0 and isolate small amounts of protein. In this
0 Gy 150 Gy 175 Gy 200 Gy technique, the sample to be fractionated is denatured
and coated with detergent by heating in the presence
of SDS and a reducing agent. The SDS coating
Figure 6. Concentrations of protein of P. berghei
gives the protein a high net negative charge that is
of erythrocytic stadium post gamma irradiation.
proportional to the length of the polypeptide chain.
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Research and Applications (IJERA) ISSN: 2248-9622 www.ijera.com
Vol. 3, Issue 1, January-February 2013, pp.314-319
The sample is loaded on a polyacrylamide gel, and REFERENCES
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