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EuFMD
OS22
New technologies to assist
timely decision-making in a
response and the use of
modelling to support
contingency planning
Anette Ella Boklund, DVM, Ph.D.
Department of Veterinary and Animal Sciences,
University of Copenhagen (UCPH)
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22 2
What are models?
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
Anette Ella Boklund
Modelling to support continguency
Scopus search on ”foot-and-mouth disease” & ”modelling”
3
CSF
in NL
FMD
in UK
FMD
in UK
16 MB RAM 8 GB RAM
500 x
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
Anette Ella Boklund
Modelling to support continguency
4
Modelling
4
25/11/2022 4
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22 5
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
What are models?
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
What are models?
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
What are models?
Anette Ella Boklund
Modelling to support continguency
Distance moved between pig production farms
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
Anette Ella Boklund
Modelling to support continguency
Transport vehicle
Infected herd
Movements of pigs
Person contacts
Neighbouring herd
Semen
Semen
Abattoir
What are models?
Distance moved between pig
production farms
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
Anette Ella Boklund
Modelling to support continguency
Transport vehicle
Infected herd
Movements of pigs
Person contacts
Neighbouring herd
Semen
Semen
Abattoir
Simulation models
Danish contingency
- probability to detect disease
- probability of compliance
- probability of reporting contacts
DO NOT
ENTER
CAUTION
Herd-data
ID-numbers
Numbers of animals
Coordinates
Herd-types
Data related to FMD
- incubation period
- time to clinical signs
- spread time within herd
Movement data
- movements of live animals
- movements to slaughter
- milk tankers
- distances
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
Outcome from models...
11
Halasa et al., 2019.
Transbound Emerg Dis. 2020;00:
1–12., DOI: 10.1111/tbed.13500
#culled animals Economic costs
Grey = 2006 data
White = 2018 data
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
Outcome from models...
12
Halasa et al., 2019.
Transbound Emerg Dis. 2020;00:
1–12., DOI: 10.1111/tbed.13500
#culled animals Economic costs
Grey = 2006 data
White = 2018 data
2006/2007 data:
• Pre-emptive culling of neighboring farms (Depop) was optimal
(economics)
2018 data:
• Epidemics starting in cattle: Depop optimal
• Epidemics starting in pig or sheep/goats: Basic ~ Depop
Regular assessments are needed
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
How to use models in contingency
13
Epidemic curve Resources Vaccination
Surveillance
Surveillance - queue
Marschik et al., 2021.
Front. Vet. Sci.,
https://doi.org/10.3389/fvets.2
020.594753
Animal movements
Indirect contacts
Local spread
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
How to use models in continguency - resources
14
Boklund et al., 2017.
Front. Vet. Sci.,
doi:
10.3389/fvets.2017.00064
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
How to use models in continguency - resources
15
Boklund et al., 2017.
Front. Vet. Sci.,
doi:
10.3389/fvets.2017.00064
• Personnel resources peak within the first week
• Time needed for surveillance visits - most influential factor
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
How to use models in continguency – lab capacity
16
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
New technologies to assist timely decision-making
● “a technique for detecting early signs of potentially important developments through a systematic examination of
potential threats and opportunities, with emphasis on new technology and its effects on the issue at hand”
(OECD, n.d.a).
17
Horizon scanning
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
New technologies to assist timely decision-making
Generic risk assessment tools
18
Entry Exposure First infection Establishment Epidemiological cons. Economic cons.
SPARE RRAT
SVARRA MINTRISK
TOOL Semi-quantitative tool
TOOL
TOOL Qualitative tool
Quantitative tool
Conclusions on the ASF risk:
similar across the generic RA tools, despite differences observed in calculated risks
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
New technologies to assist timely decision-making
Generic risk assessment tools
19
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
New technologies to assist timely decision-making
New technologies include also
● Artificial intelligence
● Big data
● Machine learning
● Automated data access and
management
● Etc...
20
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22
New technologies to assist timely decision-making in a
response and the use of modelling to support contingency
planning
● “to assist timely decision-making”
○ Is NOT building the bridges while we are crossing!
● Data quality is important
○ Garbage in = garbage out
21
Anette Ella Boklund
Modelling to support continguency
#OS22
Conclusion
Presenter name
Short title for presentation
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22 23
● Models should be build in
peace-time
● Automated data acces and
management
● Collaboration with other
sciences is needed
Anette Ella Boklund
Modelling to support continguency
#OS22
Digitalization and innovation applied to the prevention and control of
foot-and-mouth and similar transboundary animal diseases (FAST) OS22 24
● Data quality is important!
● There will be failures
● Time, money and man-
power is needed!
Anette Ella Boklund
Modelling to support continguency
Thank you !..
https://ivh.ku.dk/
anebo@sund.ku.dk

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A. Boklund - New technologies to assist timely decision-making in a response and the use of modelling to support contingency planning

  • 1. EuFMD OS22 New technologies to assist timely decision-making in a response and the use of modelling to support contingency planning Anette Ella Boklund, DVM, Ph.D. Department of Veterinary and Animal Sciences, University of Copenhagen (UCPH)
  • 2. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 2 What are models? Anette Ella Boklund Modelling to support continguency
  • 3. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 Anette Ella Boklund Modelling to support continguency Scopus search on ”foot-and-mouth disease” & ”modelling” 3 CSF in NL FMD in UK FMD in UK 16 MB RAM 8 GB RAM 500 x
  • 4. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 Anette Ella Boklund Modelling to support continguency 4 Modelling 4 25/11/2022 4
  • 5. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 5
  • 6. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 What are models? Anette Ella Boklund Modelling to support continguency
  • 7. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 What are models? Anette Ella Boklund Modelling to support continguency
  • 8. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 What are models? Anette Ella Boklund Modelling to support continguency Distance moved between pig production farms
  • 9. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 Anette Ella Boklund Modelling to support continguency Transport vehicle Infected herd Movements of pigs Person contacts Neighbouring herd Semen Semen Abattoir What are models? Distance moved between pig production farms
  • 10. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 Anette Ella Boklund Modelling to support continguency Transport vehicle Infected herd Movements of pigs Person contacts Neighbouring herd Semen Semen Abattoir Simulation models Danish contingency - probability to detect disease - probability of compliance - probability of reporting contacts DO NOT ENTER CAUTION Herd-data ID-numbers Numbers of animals Coordinates Herd-types Data related to FMD - incubation period - time to clinical signs - spread time within herd Movement data - movements of live animals - movements to slaughter - milk tankers - distances
  • 11. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 Outcome from models... 11 Halasa et al., 2019. Transbound Emerg Dis. 2020;00: 1–12., DOI: 10.1111/tbed.13500 #culled animals Economic costs Grey = 2006 data White = 2018 data Anette Ella Boklund Modelling to support continguency
  • 12. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 Outcome from models... 12 Halasa et al., 2019. Transbound Emerg Dis. 2020;00: 1–12., DOI: 10.1111/tbed.13500 #culled animals Economic costs Grey = 2006 data White = 2018 data 2006/2007 data: • Pre-emptive culling of neighboring farms (Depop) was optimal (economics) 2018 data: • Epidemics starting in cattle: Depop optimal • Epidemics starting in pig or sheep/goats: Basic ~ Depop Regular assessments are needed Anette Ella Boklund Modelling to support continguency
  • 13. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 How to use models in contingency 13 Epidemic curve Resources Vaccination Surveillance Surveillance - queue Marschik et al., 2021. Front. Vet. Sci., https://doi.org/10.3389/fvets.2 020.594753 Animal movements Indirect contacts Local spread Anette Ella Boklund Modelling to support continguency
  • 14. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 How to use models in continguency - resources 14 Boklund et al., 2017. Front. Vet. Sci., doi: 10.3389/fvets.2017.00064 Anette Ella Boklund Modelling to support continguency
  • 15. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 How to use models in continguency - resources 15 Boklund et al., 2017. Front. Vet. Sci., doi: 10.3389/fvets.2017.00064 • Personnel resources peak within the first week • Time needed for surveillance visits - most influential factor Anette Ella Boklund Modelling to support continguency
  • 16. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 How to use models in continguency – lab capacity 16 Anette Ella Boklund Modelling to support continguency
  • 17. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 New technologies to assist timely decision-making ● “a technique for detecting early signs of potentially important developments through a systematic examination of potential threats and opportunities, with emphasis on new technology and its effects on the issue at hand” (OECD, n.d.a). 17 Horizon scanning Anette Ella Boklund Modelling to support continguency
  • 18. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 New technologies to assist timely decision-making Generic risk assessment tools 18 Entry Exposure First infection Establishment Epidemiological cons. Economic cons. SPARE RRAT SVARRA MINTRISK TOOL Semi-quantitative tool TOOL TOOL Qualitative tool Quantitative tool Conclusions on the ASF risk: similar across the generic RA tools, despite differences observed in calculated risks Anette Ella Boklund Modelling to support continguency
  • 19. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 New technologies to assist timely decision-making Generic risk assessment tools 19 Anette Ella Boklund Modelling to support continguency
  • 20. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 New technologies to assist timely decision-making New technologies include also ● Artificial intelligence ● Big data ● Machine learning ● Automated data access and management ● Etc... 20 Anette Ella Boklund Modelling to support continguency
  • 21. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 New technologies to assist timely decision-making in a response and the use of modelling to support contingency planning ● “to assist timely decision-making” ○ Is NOT building the bridges while we are crossing! ● Data quality is important ○ Garbage in = garbage out 21 Anette Ella Boklund Modelling to support continguency
  • 22. #OS22 Conclusion Presenter name Short title for presentation Anette Ella Boklund Modelling to support continguency
  • 23. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 23 ● Models should be build in peace-time ● Automated data acces and management ● Collaboration with other sciences is needed Anette Ella Boklund Modelling to support continguency
  • 24. #OS22 Digitalization and innovation applied to the prevention and control of foot-and-mouth and similar transboundary animal diseases (FAST) OS22 24 ● Data quality is important! ● There will be failures ● Time, money and man- power is needed! Anette Ella Boklund Modelling to support continguency