Base editing, prime editing, Cas13 & RNA editing and organelle base editing
PROF TAMAKI OKABAYASHI (1).pdf
1. Center for Animal Disease Control/CADIC,
University of Miyazaki
20230202@BBSKP
Prof. Tamaki Okabayahshi,
Vice Director of CADIC
BRIN visiting Professor.
4. In Japan Pork Broiler Beef
Market share 9.2 % 17.2 % 10.1 %
Ranking 2 2 3
Miyazaki, Japan
5. FMD
BL
BRDC
PED
PRRS
Avi-Flu
Outbreaks of FMD in Miyazaki, 2010
In Japan Pork Broiler Beef
Market share 9.2 % 17.2 % 10.1 %
Ranking 2 2 3
Total Economic loss USD 3 billions
1362 farmers, 297,808 animals
“The Disasters”
Why has CADIC established?
6. Open sore on dental pad
Vesicles
Vesicles
Peel of skin on feet (pig)
Clinical signs
•Loss of appetite
•Fever
•Lameness
•Drooling of saliva
•Vesicles
•Erosion
•Ulcer
7. ●Lack in recognition for an entry of malignant epidemics
in the globalization
●Importance of the practical experience
●Importance to develop international education programs
●Lack of veterinarians who are practiced in the handling
of the farm animals
●Need to develop international network between
foreign countries, especially Asian countries,
on countermeasures for prevention of emerging and
transboundary infections
What we learned from FMD outbreak
8. Div. of Livestock Science &
Support
Div. of Infectious Diseases
Research & Inspection
Div. of International
Cooperation & Education
Current Director
Dr. Ayako Yoshida
(2021Oct.~)
Div. HEAD: Dr. Sekiguchi
Div. HEAD: Dr. Mekata
Div. HEAD: Dr. Okabayashi
Div. HEAD: Dr. Iguchi
Pathological autopsy
Div. of Disease Control
Set up of CADIC in Miyazaki since Oct.2011
Practice of epidemiology using GIS
Emergency response training
Former Director
Dr. Naoaki Misawa
(2011Oct.~)
9. University of Miyazaki
Fac. Education
Fac. Engineering
Fac. Medicine
Fac. Agriculture
Graduate School
• Grad. Sch. of Agriculture Masters course
• Grad. Sch. of Education
• Grad. Sch. of Medicine
• Grad. Sch. of Engineering
• Interdisciplinary Grad. Sch. of Agriculture
and Engineering
• Interdisciplinary Grad. Sch. of Medicine and
Veterinary Medicine
Fac. Regional
Innovation
University of Miyazaki
Hospital
Frontier Scientific Research Center
Center for Animal Disease Control
10. Technical development for
livestock food product
Advanced research for
disease control
Regional & international
contributions for disease control
Development of
global human resources for
leader of disease control
Based on the past experiences of trans-boundary malignant
epidemics, like FMD and HPAI…
CADIC is aiming at
INTERNATIONAL DISEASE CONTROL NETWORK
MOU
27 countries, 89 institutes
Missions of CADIC
11. Center for Animal Disease Control (CADIC)
October 1, 2011
Center of Livestock Research and Education
November 21, 2013
13. Pathological autopsy HPAI diagnosis
Emergency response training
Sampling and transfer of lab specimens
Operation in safety cabinet
Practice of epidemiology using GIS
Practice for handling of cattle
Diagnosis of rabies Lecture by a foreign researcher
Development of human resources especially for young experts
14. Promoting science and technology
Enhance the exchange of youths in Asian countries and Japan
who will play a crucial role in the field of science and technology.
Raising the interest of Asian youths toward the leading Japanese science
and technologies at Japanese universities
2016 IPB@UOM
International collaboration research activities
15. International collaboration of CADIC
JSPS Core-to-Core Program
(Asia-Africa Science Platforms)
2017Apr.-2021Mar.
Enhancement of the livestock productivity and reinforcement of
countermeasure for prevention of animal infectious diseases in
Southeast Asia by a cooperation with research bases with a hub function
Dr. Naoaki Misawa
Director of CADIC,
University of Miyazaki
Dr. Pranee Rodtian
Acting Director,
OIE reference laboratory of FMD-SEA
Dr. Bambang Pontjo Priosoeryanto
Professor,
Bogor Agricultural University
16. Livestock Revolution in ASEAN for a Kitchen of the World:
Development of Novel Technologies Yielding Stable Livestock Production
and Food Safety
2020-2015
1. International Cooperation
2. Addressing Global Issues and Advancing Science
3. Capacity Development
Science and Technology Research Partnership
for Sustainable Development
17. International collaboration of CADIC
Since 2020
三澤尚明 教授
CADICセンター⻑
Dr. Lerdchai
VRDC-ER所⻑
•
•
•
•
E
A
-
(
D C
三澤尚明 教授
CADICセンター⻑
•
•
•
•
A
-
(
D C
Dis-contamination
system
Development of
Multiple/Rapid/High sensitive
diagnosis for livestock diseases
Simulation model
livestock diseases
Anti-FMDV drug screening
Collaboration topics in SATREPS
Monitoring system for FMDV
21. Diagnosis tools from CADIC
Immunochromatography test kit
(antigen/antibody)
Multiple qRT-PCR Mobile PCR
Luciferase-linked
antibody capture assay (LACA)
Droplet Digital-PCR
22. Mobile Real-Time PCR “PicoGene™ PCR1100”
15 min, 7 USD / One reaction
DNA and RNA measuring anywhere
Freeze Dried PCR mastermix
Non-cold-chain transport of reagents for filed application
Same primers/probe for desktop qRT-PCR
Correlation between
Picogene and desktop-qPCR
(PCV2 virus)
24. Sever Fever with Thrombocytopenia Syndrome
20221122
China in 2011
China2011
(2007~?)
Japan
2013
(2003~?)
Korea
2012~
Taiwan
2019~
Vietnam
2019~
Thailand
2020~
Pakistan
2020~
Myanmar
2020~
25. SFTS virus
Dabie bandavirus,
genus Bandavirus,
family Phenuiviridae
SFTS virus
L segment
M
S
L
Polymerase (RdRp)
Gc
Gn
S segment
M segment
N
NSs
Nucleoprotein
Glycoproteins
RNA
クリミアコンゴ出⾎熱
BSL4
腎症候性出⾎熱
BSL3
CCHF
HFRS
SFTS
RVF
26. Clinical characteristics of SFTS
https://link.springer.com/chapter/10.1007/978-
981-13-9562-8_11
Age and sex distribution of the SFTS
incidence and CFRs in China.
https://www.researchgate.net/figure/Age-and-sex-distribution-of-the-
SFTS-incidence-and-CFRs-in-China_fig1_275360196
https://www.jmaj.jp/detail.php?id=10.31662%2Fjmaj.2019-0073
Japanese SFTS cases reported by month
CFR
16-27%
CFR
11.2-30%
27. Takahashi et al., Uirus, 65,1,2015
http://www.smsl.co.nz/Pests/Ticks+TickBorne+Diseases.html
Transmission cycle of Tick borne diseases (TBD)
https://animalbattles.wealthyblogs.com/?p=14312
29. Take home message
Sylvatic cycle
(tick-wild life)
Urban cycle
(tick-cat-human)
Infection cycles of SFTS from endemic areas, Miyazaki, Japan
➔Risks of epidemics in Asia
30. Director, Prof. Ayako Yoshida
1) Development of novel diagnosis system for food-born parasitic zoonosis
2) Epidemiology of food-born parasitic zoonosis in Japan
3) Study on the mechanisms of ascarid larval migration in host animals
Dr. Satoshi Sekiguchi
Strategy of animal infectious disease control
Bovine leukosis, BVD-MD
Dr. Hirohisa Mekata
1) Studies on bovine leukemia virus infection
2) Studies on Trypanosoma evansi infection
Dr. Kentaro Yamada
1) Studies on Rabies
2) Bio-imaging
Dr. Akatsuki Saito
1) Studies on HIV
2) ZIKA, Flavivirus,COVID-19
31.
32.
33. 20230124
Prof. Tamaki Okabayashi,
Vice Director of CADIC, University of Miyazaki, Japan
Zoonotic Lessons
Emergence, Transmission, and Potential Therapeutic for the COVID-19
Pandemic Associated with the Human-Animal-Environment Interaction
58. Heart land virus disease
Signs and symptoms of Heartland virus disease (Heartland) are often
similar to those of other tickborne illnesses, such
as ehrlichiosis or anaplasmosis.
Fever, fatigue (feeling tired), decreased appetite, headache, nausea,
diarrhea, and muscle or joint pain.
Leukopenia, Thrombocytopenia
Lone Star tick (Amblyomma americanum)
Heartland virus is a Bandavirus first discovered as a cause of
human illness in 2009 in Missouri.
treatment with doxycycline.
60. Sever Fever with Thrombocytopenia Syndrome
20221122
China in 2011
China2011
(2007~?)
Japan
2013
(2003~?)
Korea
2012~
Taiwan
2019~
Vietnam
2019~
Thailand
2020~
Pakistan
2020~
Myanmar
2020~
61. SFTS virus
Dabie bandavirus,
genus Bandavirus,
family Phenuiviridae
SFTS virus
L segment
M
S
L
Polymerase (RdRp)
Gc
Gn
S segment
M segment
N
NSs
Nucleoprotein
Glycoproteins
RNA
クリミアコンゴ出⾎熱
BSL4
腎症候性出⾎熱
BSL3
CCHF
HFRS
SFTS
RVF
62. Takahashi et al., Uirus, 65,1,2015
http://www.smsl.co.nz/Pests/Ticks+TickBorne+Diseases.html
Transmission cycle of Tick borne diseases (TBD)
https://animalbattles.wealthyblogs.com/?p=14312
63. Vectors of SFTSV infection to human
Haemaphysalis longcornis
Amblyomma testudinarium
Haemaphysalis flava
https://journals.plos.org/plosntds/article?id=10.1371/journal.pntd.0004574
65. Clinical characteristics of SFTS
https://link.springer.com/chapter/10.1007/978-
981-13-9562-8_11
Age and sex distribution of the SFTS
incidence and CFRs in China.
https://www.researchgate.net/figure/Age-and-sex-distribution-of-the-
SFTS-incidence-and-CFRs-in-China_fig1_275360196
https://www.jmaj.jp/detail.php?id=10.31662%2Fjmaj.2019-0073
Japanese SFTS cases reported by month
CFR
16-27%
CFR
11.2-30%
66. SFTS in Japan
Deadly tick!!
Tick borne diseases
20220731, N=763
Miyazaki➔
Japan, 2013
(2003~?)
68. SFTSV in Miyazaki, Japan
PCR
Antibody
1/9(11.1%)
64/147(43.5%)
8/105(7.5%)
44/105(41.9%)
Around patient housing
0/20(0%) MIR12.9%
Kirino et al., Vet. Med. Sci, 2022
Sato et al., VBD, 2018
?
A. testudinarium
H. formosensis
H. kitaokai
H. hystricis
H. megaspinosa
H. flava
First isolation of SFTSV from tick in Japan
72. * P<0.05 error bar: CI
Veterinarians
in Miyazakiki
3/90
Ordinary Citizen, Miyazaki
Hinoura et al., 2016
1/651
Ordinary Citizen, Kagoshima
Gokuden et al., 2016
1/521
Hunters
Gokuden et al., 2016
1/125
10
8
6
4
2
0
Health people from
Red Cross, Miyazaki
0/1,000
Ordinary Citizen,
Kagoshima
Gokuden et al., 2018
0/1,000
Farmers
Shinomiya et al., 2016
2/694
*
*
3.3
%
0.0
%
Infection risk assessment of SFTSV in Veterinarians
Antibody
positive
rate(%)
73. Take home message
Sylvatic cycle
(tick-wild life)
Urban cycle
(tick-cat-human)
Infection cycles of SFTS from endemic areas, Miyazaki, Japan
➔Risks of epidemics in Asia
75. Director, Prof. Ayako Yoshida
1) Development of novel diagnosis system for food-born parasitic zoonosis
2) Epidemiology of food-born parasitic zoonosis in Japan
3) Study on the mechanisms of ascarid larval migration in host animals
Dr. Satoshi Sekiguchi
Strategy of animal infectious disease control
Bovine leukosis, BVD-MD
Dr. Hirohisa Mekata
1) Studies on bovine leukemia virus infection
2) Studies on Trypanosoma evansi infection
Dr. Kentaro Yamada
1) Studies on Rabies
2) Bio-imaging
Dr. Akatsuki Saito
1) Studies on HIV
2) ZIKA, Flavivirus,COVID-19