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GENERAL
VIROLOGY
CHARACTERISTICS OF VIRUSES
PROPERTIES
Growth on
artificial
media
Division by
binary
fission
Have both
DNA &
RNA
Have
ribosomes
Have
muramic
acid
Sensitivity
to
antibiotics
Bacteria
Yes Yes Yes Yes Yes Yes
Mycoplasma
Yes Yes Yes Yes No Yes
Rickettsia
No Yes Yes Yes Yes Yes
Chlamydia
No Yes Yes Yes No Yes
Viruses
No No No No No No
VIRUSES
 Virus structure & replication
fundamentally different from cellular
organisms
 Viruses infect all major groups of
organisms
 Some viruses have broader host range
than others
 None can cross eukaryotic/prokaryotic
boundary
VIRUSES
 NOT CELLS
 NOT MICROORGANISMS
 NO FUNCTIONAL ORGANELLES
 DEPENDENT ON HOST MACHINERY
 CONTAIN EITHER DNA OR RNA
 TWO CLEARLY DEFINED PHASES:
 METABOLICALLY INERT:-TRANSMISSION
 METABOLICALLY ACTIVE:- REPLICATION
VIRUS STRUCTURE
 Range in size: less than 100nm diameter
to several hundred nanometers in length
 All viruses contain nucleic acid genome
(RNA or DNA) & protective protein coat
(capsid)
 Nucleic acid genome + capsid =
nucleocapsid
 Nucleocapsid have icosahedral, helical or
complex symmetry
VIRAL GENOME
 DNA or RNA
 Double-stranded or single-stranded
 Monopartite (all viral genes contained in
single molecule) or multipartite
(segmented: viral genes distributed in
segments)
 All are haploid – contain only one copy
of each gene; except retrovirus (diploid)
VIRAL PROTEINS
 1 (simplest virus) to > 100 (complex)
 Structural:- used to construct capsid &
other components of virion.
 Non-structural:- not part of virion -
involved in viral replication processes or
in virion assembly e.g. enzymes
 Proteins are virus coded including those
associated with envelope.
VIRAL PROTEINS
 GLYCOPROTEINS
 FUSION PROTEINS:-
 ASSOCIATED WITH PEPLOMERS
 INVOLVED IN VIRAL ENTRY & RELEASE
 MATRIX PROTEINS:-
 FOUND AS LAYER ON INSIDE OF
ENVELOPE
 PROVIDE RIGIDITY TO VIRION
VIRAL GLYCOPROTEINS
 Most occur as membrane-anchored
peplomers (spikes) extending outward
from envelope of enveloped viruses
 Sugar component corresponds to that of
host cell membrane glycoproteins
Viral Envelope
 Structurally similar to cell membrane
 Lipid bilayer with transmembrane viral
glycoproteins
 Destroyed by ether or detergent
rendering enveloped viruses non-
infectious
Viral Envelope
 Inner layer of membrane protein e.g.
matrix for myxoviruses – anchors
glycoprotein
 Glycoproteins arranged into groups of 2-
4 known as spikes -> observed under
electron microscope.
 Envelopes are more pleomorphic than
nucleocapsids
Viral Envelope
 The envelope is obtained as the
nucleocapsid buds through cell
membrane
 All animal viruses with helical
nucleocapsid contain RNA & enveloped
 Majority of animal virus families with
icosahedral symmetry are unenveloped &
those with envelopes contain DNA
VIRUS STRUCTURE
 Viruses may or may not contain envelope
 Enveloped viruses obtain envelope by
budding through host cell membrane e.g.
plasma membrane, Golgi body,
endoplasmic reticulum or nucleus
 VIRION – complete virus particle
VIRUS STRUCTURE
 Enveloped viruses do not necessarily kill
cell in order to be released – bud out of
cell => persistent infections
 Enveloped viruses are infectious only if
envelope is intact (viral attachment
proteins)
 Agents which damage envelope e.g.
alcohols & detergents destroy infectivity
Virion Nucleocapsid
Structures
 Icosahedral symmetry
 Helical symmetry
 Complex symmetry
ICOSAHEDRAL
SYMMETRY
 Solid with twenty triangular faces & 5:3:2
rotational symmetry
 Twelve corners or vertices & 5-fold
symmetry around vertices
 Capsid shell is made of repeating
subunits of viral protein
 All faces of icosahedron are identical
 Nucleic acid is packaged inside capsid
shell & protected from environment
ICOSAHEDRAL
SYMMETRY
 Proteins associate into structural units
(observed in electron microscope) known
as capsomers
 Capsomers may contain one or several
kinds of polypeptide chain
 Capsomers at the 12 corners have 5-fold
symmetry & interact with 5 neighbouring
capsomers, known as pentons or
pentamers
ICOSAHEDRAL
SYMMETRY
 Larger viruses contain more capsomers
 Extra capsomers are arranged in a
regular array on the faces of the
icosahedrons
 They have six neighbours, called hexons
or hexamers
 The size of an icosahedron depends on
the size & number of capsomers: there
will always be 12 pentons but the number
of hexons increases with size
HELICAL SYMMETRY
 Protein subunits interact with each other
& with nucleic acid to form coiled ribbon-
like structure
 Best studied virus is non-enveloped plant
virus tobacco mosaic virus
 Enveloped helically symmetrical viruses
e.g. influenza viruses, rabies virus
COMPLEX SYMMETRY
 Regular structures
 Examples include the poxviruses
FIVE BASIC STRUCTURAL
FORMS OF VIRUSES
 Naked icosahedral e.g. adenovirus
 Naked helical e.g. tobacco mosaic virus
 Enveloped icosahedral e.g. herpes
virus
 Enveloped helical e.g. rabies virus,
influenza virus, parainfluenza virus
 Complex e.g. poxvirus
Are viruses living or dead?
 In some ways fulfils criteria use to define
life; in other ways, doesn’t.
 Refer to number of infectious particles
rather than number of living particles
UNCONVENTIONAL
AGENTS
 ‘Unconventional viruses’ or ‘atypical
viruses’
 Viroids and prions
VIROIDS
 Contain RNA only
 Small (less than 400 nucleotides), single
stranded, circular RNAs
 The RNA do not appear to code for any
proteins
 Have only been associated with plant
disease
PRIONS
 Contain protein only (controversial)
 Small proteinaceous particles
 Examples of prion-caused animal
disease is scrapie in sheep and “mad
cow disease” in cattle.

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1. CHARACTERISTICS OF VIRUSES by Dr Madekurozwa of university of Zimbabwe

  • 2. PROPERTIES Growth on artificial media Division by binary fission Have both DNA & RNA Have ribosomes Have muramic acid Sensitivity to antibiotics Bacteria Yes Yes Yes Yes Yes Yes Mycoplasma Yes Yes Yes Yes No Yes Rickettsia No Yes Yes Yes Yes Yes Chlamydia No Yes Yes Yes No Yes Viruses No No No No No No
  • 3. VIRUSES  Virus structure & replication fundamentally different from cellular organisms  Viruses infect all major groups of organisms  Some viruses have broader host range than others  None can cross eukaryotic/prokaryotic boundary
  • 4. VIRUSES  NOT CELLS  NOT MICROORGANISMS  NO FUNCTIONAL ORGANELLES  DEPENDENT ON HOST MACHINERY  CONTAIN EITHER DNA OR RNA  TWO CLEARLY DEFINED PHASES:  METABOLICALLY INERT:-TRANSMISSION  METABOLICALLY ACTIVE:- REPLICATION
  • 5. VIRUS STRUCTURE  Range in size: less than 100nm diameter to several hundred nanometers in length  All viruses contain nucleic acid genome (RNA or DNA) & protective protein coat (capsid)  Nucleic acid genome + capsid = nucleocapsid  Nucleocapsid have icosahedral, helical or complex symmetry
  • 6. VIRAL GENOME  DNA or RNA  Double-stranded or single-stranded  Monopartite (all viral genes contained in single molecule) or multipartite (segmented: viral genes distributed in segments)  All are haploid – contain only one copy of each gene; except retrovirus (diploid)
  • 7. VIRAL PROTEINS  1 (simplest virus) to > 100 (complex)  Structural:- used to construct capsid & other components of virion.  Non-structural:- not part of virion - involved in viral replication processes or in virion assembly e.g. enzymes  Proteins are virus coded including those associated with envelope.
  • 8. VIRAL PROTEINS  GLYCOPROTEINS  FUSION PROTEINS:-  ASSOCIATED WITH PEPLOMERS  INVOLVED IN VIRAL ENTRY & RELEASE  MATRIX PROTEINS:-  FOUND AS LAYER ON INSIDE OF ENVELOPE  PROVIDE RIGIDITY TO VIRION
  • 9. VIRAL GLYCOPROTEINS  Most occur as membrane-anchored peplomers (spikes) extending outward from envelope of enveloped viruses  Sugar component corresponds to that of host cell membrane glycoproteins
  • 10. Viral Envelope  Structurally similar to cell membrane  Lipid bilayer with transmembrane viral glycoproteins  Destroyed by ether or detergent rendering enveloped viruses non- infectious
  • 11. Viral Envelope  Inner layer of membrane protein e.g. matrix for myxoviruses – anchors glycoprotein  Glycoproteins arranged into groups of 2- 4 known as spikes -> observed under electron microscope.  Envelopes are more pleomorphic than nucleocapsids
  • 12.
  • 13. Viral Envelope  The envelope is obtained as the nucleocapsid buds through cell membrane  All animal viruses with helical nucleocapsid contain RNA & enveloped  Majority of animal virus families with icosahedral symmetry are unenveloped & those with envelopes contain DNA
  • 14.
  • 15. VIRUS STRUCTURE  Viruses may or may not contain envelope  Enveloped viruses obtain envelope by budding through host cell membrane e.g. plasma membrane, Golgi body, endoplasmic reticulum or nucleus  VIRION – complete virus particle
  • 16. VIRUS STRUCTURE  Enveloped viruses do not necessarily kill cell in order to be released – bud out of cell => persistent infections  Enveloped viruses are infectious only if envelope is intact (viral attachment proteins)  Agents which damage envelope e.g. alcohols & detergents destroy infectivity
  • 17. Virion Nucleocapsid Structures  Icosahedral symmetry  Helical symmetry  Complex symmetry
  • 18. ICOSAHEDRAL SYMMETRY  Solid with twenty triangular faces & 5:3:2 rotational symmetry  Twelve corners or vertices & 5-fold symmetry around vertices  Capsid shell is made of repeating subunits of viral protein  All faces of icosahedron are identical  Nucleic acid is packaged inside capsid shell & protected from environment
  • 19.
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  • 21.
  • 22. ICOSAHEDRAL SYMMETRY  Proteins associate into structural units (observed in electron microscope) known as capsomers  Capsomers may contain one or several kinds of polypeptide chain  Capsomers at the 12 corners have 5-fold symmetry & interact with 5 neighbouring capsomers, known as pentons or pentamers
  • 23.
  • 24. ICOSAHEDRAL SYMMETRY  Larger viruses contain more capsomers  Extra capsomers are arranged in a regular array on the faces of the icosahedrons  They have six neighbours, called hexons or hexamers  The size of an icosahedron depends on the size & number of capsomers: there will always be 12 pentons but the number of hexons increases with size
  • 25.
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  • 29. HELICAL SYMMETRY  Protein subunits interact with each other & with nucleic acid to form coiled ribbon- like structure  Best studied virus is non-enveloped plant virus tobacco mosaic virus  Enveloped helically symmetrical viruses e.g. influenza viruses, rabies virus
  • 30.
  • 31. COMPLEX SYMMETRY  Regular structures  Examples include the poxviruses
  • 32.
  • 33. FIVE BASIC STRUCTURAL FORMS OF VIRUSES  Naked icosahedral e.g. adenovirus  Naked helical e.g. tobacco mosaic virus  Enveloped icosahedral e.g. herpes virus  Enveloped helical e.g. rabies virus, influenza virus, parainfluenza virus  Complex e.g. poxvirus
  • 34.
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  • 41. Are viruses living or dead?  In some ways fulfils criteria use to define life; in other ways, doesn’t.  Refer to number of infectious particles rather than number of living particles
  • 42. UNCONVENTIONAL AGENTS  ‘Unconventional viruses’ or ‘atypical viruses’  Viroids and prions
  • 43. VIROIDS  Contain RNA only  Small (less than 400 nucleotides), single stranded, circular RNAs  The RNA do not appear to code for any proteins  Have only been associated with plant disease
  • 44. PRIONS  Contain protein only (controversial)  Small proteinaceous particles  Examples of prion-caused animal disease is scrapie in sheep and “mad cow disease” in cattle.