This document summarizes a presentation on the role of the DAF-2 receptor pathway in regulating longevity in C. elegans. Key points include:
1) The DAF-2 receptor integrates environmental signals like temperature and regulates processes involved in growth and survival.
2) Mutations in daf-2 can both positively and negatively impact longevity, growth, and reproduction depending on temperature.
3) Experiments examining expression levels of daf-2 ligands identified pro-survival, anti-survival, and condition-specific ligands.
4) Further experiments showed that inhibiting protein synthesis extends lifespan at 25°C but is harmful at 15°C, and this effect is dependent on daf
Locating and isolating a gene, FISH, GISH, Chromosome walking and jumping, te...
Barshop Journal Club February 2010 (2)
1. To live and grow:
Mechanisms of longevity via a
growth hormone pathway
Angela Sanchez
CSB
Larsen Lab
2. Goals for today: Feedback on current data
• New Data
• Critiques
• Key experiments for model testing
• HOLD QUESTIONS/COMMENTS for first portion
• Then free for all
6. daf-2 mutation negative impacts
% Growth to Adult % Brood Size Reduced Movement
Allele 15˚C 25.5C 15˚C 25˚C 15˚C 25.5C
WT 100 100 100 100 No No
Class I
M41 100 0 100 88 No No
Class 2
E1370 100 0 76 39 No Yes
M596 100 0 71 89 No Yes
m579 100 0 73 67 No Yes
(adapted from Gems 1998)
Capture the benefit…..avoid the risk
7. Identifying Mechanisms of Survival
1) Longevity Variable: COOL TEMPERATURE
2) Sorting: ALLELIC SERIES
Signaling that
promote survival?
identify what is benefical or detrimental
8. Cool Temperature and daf-2 mutation:Similar effects
PHENOTYPE TEMPERATURE DAF-2
Lifespan DOUBLES DOUBLES
Development DELAYED DELAYED
Oxygen
Consumption
REDUCED REDUCED
Temperature daf-2 mutation
9. DAF-2
daf-2 alleles have weak and strong
lifespan effects
m41
G380E
m579
R434C
m596
G544S
e1370
P1465S
MILD
SEVERE
10. daf-2 mutants: abnormal temperature response
0
20
40
60
80
100
0 20 40 60
daf-2(m41)
Ligand binding domain
15˚C vs 25˚C
daf-2 25˚C vs WT 25˚C daf-2 15˚C vs WT 15˚C daf-2 15˚C vs daf-2 25˚C
Wild type
15˚C25˚C
12. Sorting out daf-2 ligands
• Which are expressed in adult?
• Which are pro-survival?
• Which are anti-survival?
• Monitor mRNA levels 39 ligands
15˚C Wildtype PRO-SURVIVAL
25˚C Wildtype ANTI-SURVIVAL PRO-SURVIVAL
15˚C daf-2 vs WT
25˚C daf-2 vs WT
PRO-SURVIVAL
PRO-SURVIVAL ANTI-SURVIVAL
ANTI-SURVIVAL
Possible Function of These Peptide Growth Factors
13. Sorting out daf-2 ligands
• Day 1 adults
• Larval development at 15˚C
• 24 hours at 15˚C or 25˚C
• 3-4 Biological replicate
• qRT-PCR duplicates
– All 39 detectable
– 1000 fold range
15˚C 25˚C
Wildtype Wildtype
M41 M41
E1370 E1370
M596 M596
m579 m579
14. Environment
Effects
Gene Allele Effects
Gene X
Environment
Interaction Effects
• Environment Effects
• Gene x Environment Interaction Effects
• Gene Allele Effects
daf-2 ligands qRT-PCR Results:
Questions we will answer
15. • Wild type 15˚C vs Wild type 25˚C Up at 15˚C
Up at 25˚C
daf-2 ligands qRT-PCR Results:
Environment Effects
16. • Wild type 15˚C vs Wild type 25˚C
• daf-2 15˚C vs daf-2 25˚C
m41
e1370
m596
m579
Up at 15˚C
Up at 25˚C
daf-2 ligands qRT-PCR Results:
Gene x Environment Interaction Effects
Increasing Lifespan
17. • Wild type 15˚C vs Wild type 25˚C
• daf-2 15˚C vs daf-2 25˚C
m41
e1370
m596
m579
• daf-2 25˚C vs wild type 25˚C
• daf-2 15˚C vs wild type 15˚C
Up at 15˚C
Up at 25˚C
Higher than WT
Lower than WT
daf-2 ligands qRT-PCR Results:
Gene Allele Effects
Increasing Lifespan
Genotype Changes
18. Pro-survival Insulins
WT 15˚C vs
WT 25˚C
daf-2 15˚C vs
daf-2 25˚C
15˚C
25˚C
daf-2
daf-2
daf-2 25˚C vs
WT 25˚C
daf-2 15˚C vs
WT 15˚C
19. Anti-survival Insulins
WT 15˚C vs
WT 25˚C
daf-2 15˚C vs
daf-2 25˚C
daf-2 25˚C vs
WT 25˚C
daf-2 15˚C vs
WT 15˚C
15˚C
25˚C
daf-2
daf-2
24. RNAi of ins genes: Growth Assay
• Adult hermaphrodite 24 hrs on RNAi plates
• 2 hr egg lay to synchronize
• Animals monitored for growth effects
25. ins-7 RNAi effects growth
• ins-7
– 100% embryonic lethality at 15˚C
– Delayed variable growth at 25˚C
• Results in death as early larvae
• or dauer like arrest maybe death
• ins-7 unique cellular function
• Other explanations
27. Testing anti-survival ins-19 and ins-7
Lifespan Analysis
• ins-17 RNAi
– no significant change
• ins-19 RNAi
– not significant at 15˚C
– Significant at 25˚C
• Trial one longer
• Trial two shorter
• ins-7 RNAi
– Not significant at either 15˚C or 25˚C
– Unlike Murphy and Kenyon publications
29. Conclusions for discussion
• All ins genes are made
– with wide range of expression levels
– Competition for the receptor occupancy
• ins gene expression is controlled by multiple factors
• ins gene functions may differ in development and
adult longevity
• Long life achieved by
– enhancing survival patterns
– reducing life limiting factors
– RISKY
30. Main Questions: Signaling and Mechanisms of Longevity
DAF-2 RECEPTOR
LONGEVITY
Signaling that
promote survival?
Mechanisms of longevity?
31. Microarray: 25˚C vs 15˚C
mRNA mRNA
Compare
PROTEIN
SYNTHESIS
LYSOSOMALMETABOLISM
32. • eIF4 G
– Translation Initiation Factor
– Inhibition Increases lifespan
– Repressed at 25
• eIF3 A
– Translation Initiation Factor
Temperature Regulated Translation Genes
Environment
Effects
Gene Allele Effects
Gene X
Environment
Interaction Effects
35. • Inhibition does not increase lifespan in wild type
• Inhibition results in sickly/paralysis phenotype
• Required for lifespan extension in
– m579
– e1370
eIF4 RNAi harmful at 15˚C
40. • Inhibition does not increase lifespan in wildtype
• Inhibition results in paralysis/hernia phenotype
• Required for lifespan extension in
– m579
– m41
eIF3 RNAi harmful at 15˚C
42. • Inhibition increases lifespan in wildtype
• Effect enhanced in daf-2 mutants
eIF3 RNAi extends lifespan at 25˚C
43. • Effect is CONDITION and GENOTYPE specific
• Translation inhibition is harmful at 15˚C
• Effect ENHANCED in daf-2 mutants
• Not additive
• daf-2 mutation overcomes life-limiting barrier
Conclusion: Be precise about context
44. Why is lifespan extension enhanced in daf-2 mutants?
PROTEIN
SYNTHESIS
LYSOSOMALMETABOLISM
DAF-2 RECEPTOR
Temperature
45.
46. A long long time ago……….. (1981)
in a lab far far away……… (missouri)
mutagenesis screen for dauer formation
53. Tools for deciphering daf-2
DAF-2 RECEPTOR
• 35 alleles
• Different severity for different phenotypes
• Need second longevity variable
TEMPERATURE
Editor's Notes
Predisposition to live long
The talk is broken into two parts. The first part will focus on signaling that will promote either survival or grwth and the second will focus on mechanisms of longevity mediated by daf-2 receptor
Integrates enviornmental signals such as nutrient availability, temperture to decide if it should grow or hunker down to survive etc originally isolated for dauer formation which is a resistant stage, and mutations in this receptor extend lifespan
Mention that these are independently isolated alleles. Capture benefit and treat risk
Homology to the insulin receptor blah blah done. Focus in on daf-2 receptor
Why so interesetd in temperature? Well as it happens temperature and daf-2 have an awful lot in common. In polkiothermic animals are known to double lifespan – as are daf-2 mutations. When we look at other phenotypes like development – it is slowed both at cool temperatures.
Daf-2 mutations are sequenced. Point out that these are alleleles. Mutation known and causes an amino acid change these are missense alleles.
Change this to make mutants more obvious
Homology to the insulin receptor blah blah done. Focus in on daf-2 receptor. MENTION AGONISTS OR ANTAGONISTS
Arrows going up or down
Predisposition not deterministic
34-18
qRTPCR of daf-2 mRNA 15˚C 25˚C mutants
The talk is broken into two parts. The first part will focus on signaling that will promote either survival or grwth and the second will focus on mechanisms of longevity mediated by daf-2 receptor
FIX LABELS
43-18
Homology to the insulin receptor blah blah done. Focus in on daf-2 receptor
Explain dauers. Factors determing. Screened for mutants
Explain dauers. Factors determing. Screened for mutants
Ordered into pathways. One branch increases lifespan the other does not
In order to figure out how daf-2 works we are very lucky that the c elegans community affords us many tools. There are 35 isolated daf-2 mutants and what can be gleaned from this is that daf-2 regulates a variety of processes and these mutants effect each of these processes differently. We can exploit this fact to help us decipher which signaling may be important for the process – survival that we are interested in. But how are we to tell which signaling is good for the trait we’re interested in or which is a block. We need a second longevity variable, one that feeds into this receptor. And for that we are choosing temperature